Bmd49 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Bmd49 (Bone mineral density QTL 49) Rattus norvegicus

Symbol: Bmd49
Name: Bone mineral density QTL 49
RGD ID: 2300165
Trait: lumbar vertebra mineral mass   (VT:0010511)    
Measurement Type: bone mineral density   (CMO:0001226)    
LOD Score: 4.8
P Value: 1.0E-4
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2288,862,519 - 133,862,519RGD_MAPPER_PIPELINE
Rnor_6.0291,664,872 - 136,664,872RGD_MAPPER_PIPELINERnor6.0
Rnor_5.02111,366,095 - 156,366,095RGDRnor5.0
Cross Type: intercross
Strains Crossed: COP/OlaHsd DA/OlaHsd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
osteoporosis  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
COP/OlaHsd  (IEA)
DA/OlaHsd  (IEA)

References

References - curated
1. Koller DL, etal., J Bone Miner Res. 2008 Sep;23(9):1382-8.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
61814Pex2peroxisomal biogenesis factor 229825175698269185Rat
71081Cldn11claudin 112115823541115836846Rat
69254Impa1inositol monophosphatase 129367520393696355Rat
69309Fabp4fatty acid binding protein 429379266693797267Rat
70997Fabp5fatty acid binding protein 529398166293985322Rat
2120Anxa5annexin A52123162477123194730Rat
3349Pld1phospholipase D12113651967113849403Rat
620047Il2interleukin 22123847150123851854Rat
2391Cpb1carboxypeptidase B12105059293105089682Rat
68391Pde7aphosphodiesterase 7A2104042124104134101Rat
621021PkiacAMP-dependent protein kinase inhibitor alpha29659318596668222Rat
631398Kcnmb2potassium calcium-activated channel subfamily M regulatory beta subunit 22118276298118585321Rat
620961Prkciprotein kinase C, iota2115941998116002550Rat
2390Cpa3carboxypeptidase A32105016798105047989Rat
2904Il7interleukin 729642788496474979Rat
621356Nudt6nudix hydrolase 62124134301124149824Rat
2387Cpceruloplasmin2104744249104803034Rat
621397Ghsrgrowth hormone secretagogue receptor2113065953113071265Rat
621399SkilSKI-like proto-oncogene2115862932115891304Rat
621403Hey1hes-related family bHLH transcription factor with YRPW motif 129532014795322701Rat
727973Acad9acyl-CoA dehydrogenase family, member 92122782051122806166Rat
620916Pik3caphosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha2118831350118861456Rat
620134Zmat3zinc finger, matrin type 32118715229118746109Rat
2609Fgf2fibroblast growth factor 22124081072124134133Rat
708407Pex5lperoxisomal biogenesis factor 5-like2119330330119405809Rat
621117Nlgn1neuroligin 12111057291111973681Rat
620505Crhcorticotropin releasing hormone2104459999104461863Rat
621059Ccna2cyclin A22123274727123282266Rat
2483Cyp7b1cytochrome P450 family 7 subfamily B member 12102701903102871257Rat
68947Stmn2stathmin 229542425195471900Rat
620295Snx16sorting nexin 1629351879693541056Rat
1304917Arsearylsulfatase E2122876645122884673Rat
1304936Mtfr1mitochondrial fission regulator 12104005696104040914Rat
628734Tnfsf10TNF superfamily member 102113008008113026899Rat
727802Terctelomerase RNA component2116432723116433110Rat
61973Trpc3transient receptor potential cation channel, subfamily C, member 32123329954123467574Rat
620285Fabp9fatty acid binding protein 929380350393807069Rat
621785Gyg1glycogenin 12104916734104958219Rat
620394Pag1phosphoprotein membrane anchor with glycosphingolipid microdomains 129426610494277680Rat
728380Qrfprpyroglutamylated RFamide peptide receptor2122891321122949241Rat
3705Slc2a2solute carrier family 2 member 22114413427114445418Rat
621460Mfn1mitofusin 12118929738118971689Rat
1307509Larp1bLa ribonucleoprotein 1B2127845034127876793Rat
1306920Jade1jade family PHD finger 12128461147128514298Rat
708377Zbtb10zinc finger and BTB domain containing 1029469293994730976Rat
1306036Slc10a5solute carrier family 10, member 529366996293671266Rat
1306044Usp13ubiquitin specific peptidase 132119197153119317507Rat
1306277Ccdc39coiled-coil domain containing 392120278605120367829Rat
1307747Actl6aactin-like 6A2119112776119128870Rat
1306528Hspa4lheat shock protein family A (Hsp70) member 4 like2127625737127682864Rat
1307384Il21interleukin 212123965021123972356Rat
1310615Mccc1methylcrotonyl-CoA carboxylase subunit 12122550777122690540Rat
1308524Ect2epithelial cell transforming 22112769385112831476Rat
1305390Plk4polo-like kinase 42127686911127705518Rat
1309517Rpl22l1ribosomal protein L22 like 12115362799115364735Rat
1309519Zfand1zinc finger AN1-type containing 129365689593666745Rat
1306767Tpd52tumor protein D5229495973295041277Rat
1307225Egfem1EGF-like and EMI domain containing 12116524965117153933Rat
1305909Ndufb5NADH:ubiquinone oxidoreductase subunit B52119139717119153753Rat
1311104Nceh1neutral cholesterol ester hydrolase 12112868834112932622Rat
1308862Sec62SEC62 homolog, preprotein translocation factor2116188736116225510Rat
1311665Ankrd50ankyrin repeat domain 502125289071125323527Rat
1310997MecomMDS1 and EVI1 complex locus2117396084117993604Rat
1311970Zc2hc1azinc finger, C2HC-type containing 1A29648293896520202Rat
1309031Hltfhelicase-like transcription factor2104854571104914338Rat
1560393Armc1armadillo repeat containing 12103926567103979607Rat
1310478Spata5spermatogenesis associated 52124149872124341138Rat
1560683RGD1560683similar to 40S ribosomal protein S212133607298133607513Rat
1309264Bbs7Bardet-Biedl syndrome 72123283402123322991Rat
1305234Ythdf3YTH N(6)-methyladenosine RNA binding protein 32100677388100711365Rat
1305451Bhlhe22basic helix-loop-helix family, member e222102685513102688624Rat
1307888Exosc9exosome component 92123264679123275623Rat
1307889Mynnmyoneurin2116397154116414702Rat
1309293Spry1sprouty RTK signaling antagonist 12124400689124405331Rat
1307998Phc3polyhomeotic homolog 32116028735116103227Rat
1310102Hnf4ghepatocyte nuclear factor 4, gamma2100225880100372710Rat
1308931Samd7sterile alpha motif domain containing 72116239812116269769Rat
1307100RGD1307100similar to RIKEN cDNA D630029K192123555742123766675Rat
1306943Trim55tripartite motif-containing 552104416972104459117Rat
1307531Mrpl47mitochondrial ribosomal protein L472119128311119139451Rat
1309446Intuinturned planar cell polarity protein2127459089127521327Rat
1310132Mfsd8major facilitator superfamily domain containing 82127706618127784129Rat
1310548Hps3HPS3, biogenesis of lysosomal organelles complex 2 subunit 12104789423104832964Rat
1308804Pgrmc2progesterone receptor membrane component 22127986106128002005Rat
1309668Dcun1d1defective in cullin neddylation 1 domain containing 12122476173122527153Rat
1306196Eif5a2eukaryotic translation initiation factor 5A22115336646115354203Rat
1310045Ttc14tetratricopeptide repeat domain 142120266883120277505Rat
1311733Fxr1FMR1 autosomal homolog 12120529716120570356Rat
1562486Dnajc5bDnaJ heat shock protein family (Hsp40) member C5 beta2104290726104382846Rat
2071Agtr1bangiotensin II receptor, type 1b2105149020105224335Rat
1561457Actrt3actin-related protein T32116416561116418521Rat
1565052Lrrc34leucine rich repeat containing 342116370013116391964Rat
1563109Tmem212transmembrane protein 2122113578614113616786Rat
1561499Lrrc31leucine rich repeat containing 312116299380116343089Rat
1565000Fabp12fatty acid binding protein 1229371246893766665Rat
1566022LOC499573LRRGT0005629508425495106157Rat
1563987Abhd18abhydrolase domain containing 182127770588127828218Rat
1563869Zfp704zinc finger protein 70429437705994559838Rat
1560200Gpr160G protein-coupled receptor 1602116105110116162036Rat
1560220Dnajc19DnaJ heat shock protein family (Hsp40) member C192120503093120531782Rat
1563726Spata16spermatogenesis associated 162112281326112659911Rat
1560053Tbl1xr1TBL1X receptor 12107221913107359229Rat
1563847RGD1563847similar to karyopherin (importin) alpha 22133880368133882115Rat
1332726Olr1280olfactory receptor 12802115074344115075303Rat
1334307Olr389-psolfactory receptor pseudogene 38929287452692875568Rat
1359321Gnb4G protein subunit beta 42118978965119007877Rat
1359508RGD1359508similar to protein C33A12.32128675786128738215Rat
1311673Fndc3bfibronectin type III domain containing 3B2113109949113415171Rat
1564247RGD1564247similar to SUMO/sentrin specific protease 529769429797697653Rat
1359309Adad1adenosine deaminase domain containing 12123790798123848598Rat
628721Sclt1sodium channel and clathrin linker 12128523376128675668Rat
1563022Zfhx4zinc finger homeobox 429842356598610368Rat
1559967RGD1559967similar to M2-type pyruvate kinase2134178506134179766Rat
1359533LOC365778similar to RIKEN cDNA 1700034I232127776103127778350Rat
1564291Fat4FAT atypical cadherin 42125751818125879398Rat
1359558tGap1GTPase activating protein testicular GAP129254941392625942Rat
1333741Olr1279olfactory receptor 12792115092263115093210Rat
1560081LOC499584LRRGT002022110306363110329642Rat
1311852Kcnmb3potassium calcium-activated channel subfamily M regulatory beta subunit 32118868225118882562Rat
1585689Zfp639zinc finger protein 6392118906479118917491Rat
1586489Cetn4centrin 42124045092124048441Rat
1561709RGD1561709similar to ribosomal protein S182122732106122732790Rat
1564926LOC499607similar to GTPase activating protein testicular GAP12133075993133123187Rat
1562890RGD1562890RGD15628902104400402104404083Rat
1584592LOC682357similar to homolog of yeast ribosome biogenesis regulatory protein RRS12104677767104681233Rat
1561719Atp11bATPase phospholipid transporting 11B (putative)2122337757122445090Rat
1561608Bbs12Bardet-Biedl syndrome 122124048513124057026Rat
1564378RGD1564378similar to 60S ribosomal protein L23a2125253104125257745Rat
1564595Pramel3preferentially expressed antigen in melanoma-like 32102443276102455605Rat
1583489LOC682402hypothetical protein LOC6824022104996271105001713Rat
1561817TnikTRAF2 and NCK interacting kinase2113984599114391805Rat
1563562RGD1563562similar to GTPase activating protein testicular GAP12132238755132304243Rat
1565646Sox2SRY-box transcription factor 22121165137121167545Rat
1564543Chmp4ccharged multivesicular body protein 4C29357455493641497Rat
1566159RGD1566159similar to preferentially expressed antigen in melanoma-like 32102407173102422428Rat
1565989RGD1565989similar to FLJ10378 protein2127916157127948154Rat
1587345LOC310385similar to heat shock protein 82133460745133462694Rat
1591091LOC689536similar to cyclin D binding myb-like transcription factor 12130505006130507171Rat
1585218Pmp2peripheral myelin protein 229382750493831419Rat
1589592LOC502522similar to mitochondrial ribosomal protein L542112937805112938362Rat
1590215LOC685753similar to peptidylprolyl isomerase D2120637313120638592Rat
1589422Med14-ps1mediator complex subunit 14, pseudogene 12105594070105611706Rat
1587056LOC680827similar to Mitogen-activated protein kinase 6 (Extracellular signal-regulated kinase 3) (ERK-3) (p55-MAPK)2108525465108611473Rat
1559517Pabpc4lpoly(A) binding protein, cytoplasmic 4-like2130656212130658202Rat
1590660LOC680500similar to CCR4-NOT transcription complex, subunit 82104555623104557255Rat
1585492Ccdc144bcoiled-coil domain containing 144B2122702354122747848Rat
1585003LOC294985similar to 3-phosphoglycerate dehydrogenase2124761699124768754Rat
1585005LOC294909similar to Inosine-5-monophosphate dehydrogenase 1 (IMP dehydrogenase 1) (IMPDH-I) (IMPD 1)29879266598794481Rat
1585007LOC294901hypothetical LOC29490129540647595406979Rat
1583237LOC685065similar to heat shock protein 82116295605116299029Rat
1582963LOC688944similar to eukaryotic translation initiation factor 4A, isoform 12126147704126148434Rat
1589949LOC689629similar to GTPase activating protein testicular GAP12132883598132969563Rat
1565147Naaladl2N-acetylated alpha-linked acidic dipeptidase-like 22109092931110424885Rat
1583267Gpx2-ps1glutathione peroxidase 2, pseudogene 12116263844116264654Rat
1589926LOC689652similar to prohibitin2132979721132990069Rat
1593206LOC365784similar to Fructose-bisphosphate aldolase A (Muscle-type aldolase)2131485704131486986Rat
1593207LOC365777similar to D-3-phosphoglycerate dehydrogenase (3-PGDH)2126190906126192575Rat
1593209LOC365768similar to 60S ribosomal protein L72123428021123428831Rat
1593212LOC365742similar to testis expressed gene 229692357997028648Rat
1593213LOC365740hypothetical LOC36574029614384596147001Rat
1596195Slc25a31solute carrier family 25 member 312127538323127554276Rat
1595438LOC680186hypothetical protein LOC6801862101741331101742652Rat
1597461Mrps28mitochondrial ribosomal protein S2829507757795080825Rat
1595598LOC678817similar to GTPase activating protein testicular GAP12132491051132551249Rat
1596973LOC678711similar to tropomyosin 2 (beta) isoform 229519735395198228Rat
1592058LOC361937similar to Galectin-92124537252124539068Rat
1588992LOC685894similar to heterogeneous nuclear ribonucleoprotein A32121129239121130650Rat
1593483LOC689381similar to WD repeat domain 61 isoform a2135628973135630081Rat
1595487LOC680137similar to tropomyosin 3, gamma isoform 12101137061101138421Rat
1594375Slc7a14solute carrier family 7, member 142115678344115788688Rat
1594376LOC499576similar to phosphoglycerate kinase 12103345400103347198Rat
1591779LOC680421similar to 60S ribosomal protein L132104267277104267940Rat
1598096Tceal6transcription elongation factor A (SII)-like 62102369895102371888Rat
1598157LOC679913similar to Chromobox protein homolog 3 (Heterochromatin protein 1 homolog gamma) (HP1 gamma) (Modifier 2 protein) (HECH)29793788497938425Rat
1598354LOC295112similar to heat shock protein 82107917502107919525Rat
1597905LOC682571similar to spindlin2109317280109321345Rat
2319734LOC100361638hypothetical LOC10036163829207814692082457Rat
2319479LOC100361795von Hippel-Lindau binding protein 1-like29318528693185797Rat
2319570LOC100361704eukaryotic translation initiation factor 1A, Y-linked29293246592933590Rat
2321312LOC100360846proteasome subunit beta type 6-like29603196796033538Rat
2322140LOC100360416hypothetical LOC1003604162127106622127108221Rat
2322842LOC100363505hypothetical LOC10036350529631446296315268Rat
2320718LOC100361143ribosomal protein L30-like2102919226102919567Rat
2321502LOC100360756EWSR1/NFATC2 fusion protein-like2136163785136182753Rat
2322874LOC100360072succinate dehydrogenase-like2104594113104594698Rat
2322289LOC100360364hypothetical LOC1003603642106934819106936005Rat
2321558LOC100360700hypothetical LOC1003607002112013796112033122Rat
2320862LOC10036109828S ribosomal protein L42, mitochondrial-like2100955014100955815Rat
2321697LOC100360660chromosome 13 open reading frame 1-like2134289954134290501Rat
2323100Zfp267zinc finger protein 2672122855036122873696Rat
2323202Lrriq4leucine-rich repeats and IQ motif containing 42116347125116372930Rat
2321897LOC100360560rCG41410-like2127530326127531489Rat
2323451LOC100359789hypothetical LOC1003597892122019319122020986Rat
2323618LOC100359576multifunctional protein ADE2-like2100096289100099785Rat
2323670LOC100359524arginine/serine-rich coiled-coil 22120049729120051050Rat
2325355Mir551bmicroRNA 551b2116867647116867744Rat
2325576Mir124-2microRNA 124-22102311603102311711Rat
2324725LOC100363165thioredoxin-like 429255966692559872Rat
6489815LOC100911952ubiquitin-conjugating enzyme E2 variant 1-like2128850346128851138Rat
6489504LOC10091203340S ribosomal protein S21-like2129513158129513373Rat
6488949LOC100912064prohibitin-like2129924665129925515Rat
6486316LOC100912576heterogeneous nuclear ribonucleoprotein F-like2134737869134748340Rat
6486316LOC100912576heterogeneous nuclear ribonucleoprotein F-like2133961474133982862Rat
6492943LOC100911493mediator of RNA polymerase II transcription subunit 14-like2105404820105422454Rat
6491220LOC100911693eukaryotic translation initiation factor 4 gamma 1-like2105856110105866784Rat
6501927LOC100909721cyclin-dependent kinase 1-like2113481799113487416Rat
6495614LOC10091097660S ribosomal protein L24-like2116020955116025202Rat
6499243LOC100910294olfactory receptor 8D1-like2115303322115304251Rat
6499495LOC100910227olfactory receptor 149-like2115290243115291178Rat
6499628LOC100910260olfactory receptor 8D1-like2115296011115296937Rat
6499729LOC100910162olfactory receptor 8D1-like2115238435115239364Rat
6499944LOC100910199olfactory receptor 146-like2115272156115273088Rat
6499955LOC100910086olfactory receptor 149-like2115225356115226291Rat
6500144LOC100910112phosphoglycerate kinase 1-like2103184835103186633Rat
6500205LOC100910128olfactory receptor 8D1-like2115231124115232050Rat
6500436LOC100910051olfactory receptor 146-like2115207270115208202Rat
6500570LOC100909968olfactory receptor 8D1-like2115158504115159430Rat
6503741LOC100909470fragile X mental retardation syndrome-related protein 1-like2122174149122174778Rat
6504224LOC100909397PRAME family member 17-like2121878619121898611Rat
6497753LOC100910626ras-related protein Rab-5C-like2103750638103751377Rat
6501432LOC100909896ras-related protein Rap-1A-like2115055917115056823Rat
7515013LOC102555118uncharacterized LOC1025551182112717809112728526Rat
7523289LOC102547647uncharacterized LOC1025476472115928629115929281Rat
7525014LOC102555872uncharacterized LOC1025558722132555048132557483Rat
7525762LOC102549474uncharacterized LOC1025494742105393742105398616Rat
7507131LOC102556687uncharacterized LOC10255668729434777294372089Rat
7510030LOC10254676760S ribosomal protein L29-like2124290881124291413Rat
7510660LOC102553838ribosome biogenesis protein NSA2 homolog2128532054128533430Rat
7511798LOC102553273N-alpha-acetyltransferase 11-like29255889792559665Rat
7534470LOC102548481peptidyl-prolyl cis-trans isomerase D-like2104472196104475893Rat
7513228LOC102554364ubiquitin-conjugating enzyme E2 variant 1-like2128856384128857198Rat
7503655LOC102556166surfeit locus protein 6-like2122862265122864624Rat
7516215LOC102555991uncharacterized LOC1025559912132577540132718088Rat
7516893LOC102553773uncharacterized LOC1025537732128380569128386369Rat
7537942LOC102546934uncharacterized LOC10254693429500307095010185Rat
7538134LOC102549153uncharacterized LOC1025491532119553217119627543Rat
7538180LOC102551187uncharacterized LOC1025511872107252394107254871Rat
7631924LOC102553085uncharacterized LOC1025530852122641859122650375Rat
7646821LOC102555509uncharacterized LOC1025555092113468086113473658Rat
7666268LOC102555937uncharacterized LOC1025559372132583138132654268Rat
7656055LOC102555566uncharacterized LOC1025555662113592263113598593Rat
7641108LOC102554180ubiquitin-conjugating enzyme E2 variant 1-like2128843709128846527Rat
7627512LOC102556203uncharacterized LOC1025562032114567828114569535Rat
7608682LOC102547718uncharacterized LOC1025477182115929806115931551Rat
7590540LOC102551358uncharacterized LOC1025513582108748894108752296Rat
7597556LOC102549015uncharacterized LOC1025490152118282723118289007Rat
7556623LOC102552069uncharacterized LOC1025520692122520921122529437Rat
7573616LOC102550593uncharacterized LOC1025505932127245777127293781Rat
7544216LOC102546353uncharacterized LOC10254635329384452893848324Rat
7544661LOC102547815uncharacterized LOC1025478152116162054116167061Rat
7544750LOC102551838uncharacterized LOC1025518382122291354122299600Rat
7556978LOC102555205uncharacterized LOC1025552052112744241112749202Rat
7561027LOC102553210uncharacterized LOC10255321029335296693362431Rat
7548606LOC102554443uncharacterized LOC1025544432128956872128965184Rat
7602661LOC102550295uncharacterized LOC10255029529717718097200728Rat
7602709LOC102554113uncharacterized LOC1025541132128834060128835125Rat
7606094LOC102546729uncharacterized LOC10254672929431142694316348Rat
7552390LOC102555450uncharacterized LOC1025554502112982322112983704Rat
7552769LOC102552193uncharacterized LOC1025521932115394494115413345Rat
7553727LOC102549944uncharacterized LOC1025499442125067026125086092Rat
7690977LOC102555656uncharacterized LOC1025556562132280407132336676Rat
7673112LOC102546437uncharacterized LOC10254643729400283894044098Rat
7725390LOC102548736uncharacterized LOC1025487362118377528118393104Rat
7733168LOC102546477uncharacterized LOC1025464772119057359119059085Rat
7738496LOC102551935uncharacterized LOC1025519352122313349122319987Rat
7672274LOC102550696uncharacterized LOC10255069629766292897680496Rat
7722217LOC102554994protein NYNRIN-like2128775663128779741Rat
7703555LOC102547004uncharacterized LOC1025470042124511346124537204Rat
9087750LOC103691526uncharacterized LOC1036915262120340269120367845Rat
9132743LOC103691522telomeric repeat-binding factor 2-like2114565719114566600Rat
9092849LOC103691525uncharacterized LOC1036915252118885059118885881Rat
9212549LOC103691513uncharacterized LOC1036915132102305885102311282Rat
9174059LOC103691545keratin-associated protein 10-11-like2120422568120440856Rat
9098830LOC103691546basic proline-rich protein-like2127842970127856012Rat
9081782LOC103691531uncharacterized LOC1036915312124629217124637033Rat
9103824LOC103691523uncharacterized LOC1036915232116942260116961183Rat
9153539LOC103691542la-related protein 1B-like2127878696127881293Rat
9191676LOC103691547histone H3-like2130844831130845223Rat
9112018LOC103691537uncharacterized LOC1036915372128401640128410475Rat
9117034LOC103691562radixin-like2134827663134854382Rat
9202401LOC103691527uncharacterized LOC1036915272121061909121217335Rat
9074613LOC103691524uncharacterized LOC1036915242118795190118796957Rat
9126076LOC103691543la-related protein 1B-like2127914666127916237Rat
9086576LOC103691528uncharacterized LOC1036915282121345496121390514Rat
9349712LOC103691511uncharacterized LOC10369151129345967193495066Rat
9307829LOC10369153560S ribosomal protein L34 pseudogene2127663009127663675Rat
9271705LOC103691515uncharacterized LOC1036915152104217153104230672Rat
9311256LOC103691536la-related protein 1B-like2127884724127886528Rat
9313899LOC103691534myoneurin-like2127529491127529897Rat
9318917LOC103691538uncharacterized LOC1036915382128892241128899503Rat
9232686LOC103691510uncharacterized LOC10369151029275843592764588Rat
9233673LOC103691530THUMP domain-containing protein 1-like2123684846123689222Rat
9384455LOC103691533uncharacterized LOC1036915332125400460125428494Rat
9328325LOC103690673vomeronasal type-2 receptor 116-like2122106860122118565Rat
9245979LOC103695116serine/arginine-rich splicing factor 3 pseudogene2127220857127221392Rat
9251158LOC103691517uncharacterized LOC1036915172107055859107058612Rat
9251686LOC103691539uncharacterized LOC1036915392132348181132355303Rat
9256846LOC103691516uncharacterized LOC1036915162105272805105277986Rat
9303217LOC103691520U1 small nuclear ribonucleoprotein C pseudogene2113047448113047879Rat
9372491LOC103691548Golgi apparatus membrane protein TVP23 homolog B pseudogene2132727693132729342Rat
9266108LOC103691514ras-related protein Rab-5C pseudogene2104170380104171271Rat
9426501LOC103691512uncharacterized LOC10369151229446693794470068Rat
9437192LOC103695108cytochrome c, somatic pseudogene29510110695102018Rat
9444651LOC103690087uncharacterized LOC1036900872105272747105309620Rat
9447164LOC103691518eukaryotic translation initiation factor 2 subunit 3 pseudogene2101871010101877680Rat
9410442LOC103691540uncharacterized LOC1036915402133808909133874895Rat
9452260LOC10369151960S ribosomal protein L9 pseudogene2106702784106703392Rat
11367342LOC108350232uncharacterized LOC10835023229632176496325294Rat
11356258LOC10835000060S ribosomal protein L26 pseudogene2124623209124623707Rat
11449060LOC108350001uncharacterized LOC1083500012126215662126222979Rat
11433414LOC108349989uncharacterized LOC1083499892115580763115664155Rat
11461178LOC10835023760S ribosomal protein L17 pseudogene2113518075113519418Rat
11461857LOC108350212uncharacterized LOC1083502122111498367111511686Rat
11463101LOC10835018160S ribosomal protein L15 pseudogene2113871819113873432Rat
11464133LOC108349988uncharacterized LOC1083499882106574969106593494Rat
11467539Trnay-gua2transfer RNA tyrosine (anticodon GUA) 22104404682104404771Rat
11469315LOC108349999glyceraldehyde-3-phosphate dehydrogenase pseudogene2124486733124488852Rat
11471287LOC108350183glyceraldehyde-3-phosphate dehydrogenase pseudogene2124486223124486737Rat
11473249LOC108349984uncharacterized LOC1083499842104143140104152339Rat
11437210LOC108349979uncharacterized LOC10834997929492979794938468Rat
11446747LOC108350180uncharacterized LOC1083501802107013790107038637Rat
11438193LOC108349985uncharacterized LOC1083499852104691509104698190Rat
11447753LOC108350179serine/arginine repetitive matrix protein 1 pseudogene29814306798159684Rat
11438648LOC108350241uncharacterized LOC1083502412121238483121243625Rat
11361538LOC108350244uncharacterized LOC1083502442127359295127363392Rat
11440273LOC108349993uncharacterized LOC1083499932121546418121552094Rat
11366023LOC108353416uncharacterized LOC1083534162114861795114865678Rat
11370167Trnap-agg3transfer RNA proline (anticodon AGG) 329833926998339340Rat
11373430LOC10835018540S ribosomal protein S6-like2125017431125064282Rat
11431841Trnar-acg1transfer RNA arginine (anticodon ACG) 12104403855104403927Rat
11441417LOC108349981uncharacterized LOC10834998129566947295832885Rat
11453452LOC108349992uncharacterized LOC1083499922120805948120826210Rat
11433166LOC10835024260S ribosomal protein L7a pseudogene2124358493124359313Rat
11454091LOC108349996uncharacterized LOC1083499962122867164122870554Rat
11412602LOC108349994uncharacterized LOC1083499942121769189121774191Rat
11415832LOC108350234endogenous retrovirus group K member 8 Pol protein-like29812833598130914Rat
11416565LOC108350003endogenous retrovirus group K member 25 Pol protein-like2128795384128796632Rat
11417765LOC108349990uncharacterized LOC1083499902118210564118256252Rat
11417777LOC108350236uncharacterized LOC1083502362108964096108983280Rat
11417786LOC108350239serine/arginine-rich splicing factor 7 pseudogene2116438859116439582Rat
11418558LOC108349977uncharacterized LOC10834997729376094593766500Rat
11418567LOC108349987uncharacterized LOC1083499872106570533106576630Rat
11421872LOC108349986uncharacterized LOC1083499862105525669105538521Rat
11423168LOC108350235succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial pseudogene2104593295104595213Rat
11425228LOC108350240uncharacterized LOC1083502402120413321120415508Rat
11425377LOC108349995uncharacterized LOC1083499952121978834122014412Rat
11384727Smim43small integral membrane protein 432123227621123235170Rat
11384865LOC108349983uncharacterized LOC1083499832101942123102302821Rat
11384874Trnaa-agc2transfer RNA alanine (anticodon AGC) 22104404891104404963Rat
11373688LOC108350177voltage-dependent anion-selective channel protein 1 pseudogene29608229296112313Rat
11374486LOC108350233glyceraldehyde-3-phosphate dehydrogenase pseudogene29636073996361744Rat
11386574LOC108349982heterogeneous nuclear ribonucleoprotein K pseudogene2101739380101744693Rat
11409796LOC108350002uncharacterized LOC1083500022128778066128779706Rat
11410912Trnav-aac1transfer RNA valine (anticodon AAC) 12116415357116415429Rat
11379162LOC108350184keratin-associated protein 4-4-like2124992685124993323Rat
11411744LOC108350246uncharacterized LOC1083502462133499955133502346Rat
11404987LOC108349980uncharacterized LOC10834998029532343695329781Rat
11502478LOC108350245uncharacterized LOC1083502452128024823128040099Rat
11511420LOC108349998uncharacterized LOC1083499982124177865124187096Rat
11500035LOC108349991uncharacterized LOC1083499912119484695119491037Rat
11513955LOC108350243uncharacterized LOC1083502432124565677124568553Rat
11517695LOC108350182endogenous retrovirus group K member 10 Pol protein-like2115560729115570108Rat
11492656LOC108350178endogenous retrovirus group K member 9 Pol protein-like29813116098139603Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10121D2Mco341922105158337105158532Ratregion
10122D2Mco352762105157132105157422Ratregion
10387D2Mgh261312105075219105075356Ratregion
33850D2Mit302422124856936124857025Ratregion
34383D2Mgh51232106432800106432915Ratregion
33555D2Mit261322116461418116461551Ratregion
33674D2Mit171902109518711109518900Ratregion
33745D2Mit181932107802565107802747Ratregion
33765D2Mit352642135654700135654963Ratregion
35995D2Rat282712107083299107083569Ratregion
36093D2Rat2617729399531693995492Ratregion
36201D2Rat331762117135692117135871Ratregion
37332D2Rat1041462111888382111888525Ratregion
35222D2Rat3021582126702037126702197Ratregion
36918D2Rat241562100556526100556690Ratregion
37016D2Rat301642115721880115722035Ratregion
37146D2Rat792002124808670124808871Ratregion
37682D2Rat1021002124972267124972366Ratregion
37816D2Rat14521729263207292632278Ratregion
37952D2Rat1231552112175569112175725Ratregion
37990D2Rat1772002107802514107802703Ratregion
36478D2Rat311522109009838109009989Ratregion
36578D2Rat782762119024712119024978Ratregion
34807D2Rat291302107990865107990994Ratregion
34882D2Rat771722114063655114063826Ratregion
35066D2Rat801412126200235126200371Ratregion
35148D2Rat2713029655662296556760Ratregion
35729D2Rat251492101404338101404512Ratregion
35929D2Rat12212929854592098546056Ratregion
39816D2Rat3001712121113336121113508Ratregion
39820D2Rat2552162127851753127851968Ratregion
38256D2Rat1152132132130350132130578Ratregion
38266D2Rat1362152122589897122590105Ratregion
38266D2Rat1362152121579247121579455Ratregion
38362D2Rat1611482118446646118446793Ratregion
38386D2Rat1582032125427165125427367Ratregion
40462D2Rat2801452114164800114164944Ratregion
40466D2Rat3031672135646229135646395Ratregion
40612D2Rat2781302104421261104421376Ratregion
40612D2Rat2781302104421037104421376Ratregion
38488D2Rat1602492113358300113358553Ratregion
38592D2Rat11321429375780693758029Ratregion
38610D2Rat1432452106156724106156987Ratregion
38626D2Rat1711372116075644116075793Ratregion
38726D2Rat16314629251259092512750Ratregion
38960D2Rat932052133399373133399577Ratregion
38962D2Rat961492118196984118197126Ratregion
39090D2Rat1802282121404806121405049Ratregion
39164D2Rat1592002125673767125673966Ratregion
39242D2Rat982152135090614135090828Ratregion
39274D2Rat1402472106895327106895579Ratregion
39388D2Rat21320029731189797312100Ratregion
42288D2Rat33024229397079693971019Ratregion
41358D2Rat2171602121750419121750557Ratregion
41464D2Rat2153302105798562105798857Ratregion
41484D2Rat2181262124189562124189675Ratregion
42586D2Rat33221529634571296345912Ratregion
42587D2Rat3292192102090702102090923Ratregion
42590D2Rat3352422111793698111793936Ratregion
42593D2Rat3371432116712650116712791Ratregion
42594D2Rat3382172118224333118224566Ratregion
42595D2Rat2812432121349778121350097Ratregion
42596D2Rat3391432119345196119345350Ratregion
42596D2Rat3391432119343311119343459Ratregion
42597D2Rat3402022123360405123360640Ratregion
41038D2Rat21411929488246494882578Ratregion
41670D2Rat3012052126459022126459292Ratregion
41744D2Rat2791492101235221101235375Ratregion
41838D2Rat3722442125031365125031609Ratregion
41894D2Rat3311312101117380101117504Ratregion
44590D9Got441612107365293107365453Ratregion
43516D2Got18615529399535093995504Ratregion
43517D2Got6815829397079693970953Ratregion
43518D2Got7314529396243493962578Ratregion
43519D2Got6415129524909595249244Ratregion
43521D2Got7018729595621895956404Ratregion
43522D2Got541172102774990102775099Ratregion
43524D3Got1152022124333512124333713Ratregion
43525D2Got671782119156274119156451Ratregion
43526D2Got741402125938411125938550Ratregion
43527D2Got5316729851888698519052Ratregion
43529D2Got5817129688100096881170Ratregion
43530D2Got811432129229564129229706Ratregion
43531D2Got892072132785666132785867Ratregion
60796D2Wox61822115783552115783727Ratregion
60326D2Got491862107643521107643706Ratregion
60327D2Got502242108871719108871942Ratregion
60329D2Got521162103386805103386920Ratregion
60329D2Got521162103385700103386920Ratregion
60330D2Got551952100095468100095662Ratregion
60331D2Got562702100439544100439813Ratregion
60332D2Got571712100268599100268769Ratregion
60335D2Got622332115912035115912267Ratregion
60337D2Got662442115804938115805181Ratregion
60338D2Got692512115423223115423473Ratregion
60339D2Got751482122642671122642815Ratregion
60339D2Got751482122521733122521877Ratregion
60340D2Got761992125686051125686249Ratregion
60341D2Got771772123368030123368208Ratregion
60342D2Got782672123533950123534216Ratregion
60343D2Got792622112574320112574581Ratregion
60346D2Got821602125015535125015694Ratregion
60347D2Got831942126086089126086282Ratregion
60348D2Got841222133445768133445889Ratregion
60349D2Got852852131250747131251031Ratregion
60353D2Got902022132138277132138478Ratregion
60312D2Got1841362110353145110353280Ratregion
60313D2Got1871162113990925113991039Ratregion
60314D2Got19625129978823999788489Ratregion
625765D2Got601352102974543102974677Ratregion
66482D2Uia162102101977359101977568Ratregion
66650D2Mco111202119772473119772597Ratregion
66657D2Mco164002104519051104519469Ratregion
66691D2Mco242862112283118112283450Ratregion
66731D2Mco362402110428205110428464Ratregion
67324D2Arb341742106772920106773093Ratregion
67325D2Arb353022106769034106769335Ratregion
67770D2Uwm61372100567401100567535Ratregion
67780D2Uwm81742118308076118308249Ratregion
67803D2Uwm201382127088261127088386Ratregion
1630140D2Ulb102114193152114193455Ratregion
1630647D2Got32624529506119695061425Ratregion
1630697D2Got3292032124524993124525193Ratregion
1630943D2Got4082772113946291113946567Ratregion
1631772D2Uia1810529588533395885437Ratregion
1578919D18Chm471882129990733129990920Ratregion
1578919D18Chm471882129948852129949039Ratregion
1628349D2Wox4822429380479593805018Ratregion
1629907D2Ulb1821329594288095943092Ratregion
1629982D2Got3981412114349857114349997Ratregion
1638728D2Got32322729364274393642969Ratregion
1638728D2Got32322729364245393642969Ratregion
1640916D2Got4361412128020307128020447Ratregion
1641164D2Got4351792134478747134478925Ratregion
1641456D2Wox472114418676114419081Ratregion
1633103D2Got3301382126456497126456634Ratregion
1639967D2Got41621829847823998478456Ratregion
1640396D2Got4231512127109321127109471Ratregion
1640406D2Got4171392127189727127189865Ratregion
1635087D2Ulb910829408974294089849Ratregion
1636630D2Wox571572118720476118720632Ratregion
1636863D2Got3281772116393592116393768Ratregion
1638455D2Got42716429654582096545983Ratregion
1638470D2Wox552352104743530104743764Ratregion
1633857D2Got3912962100555655100555953Ratregion
1633981D2Cebr211029524774095247849Ratregion
1634150D2Wox541802104742726104742905Ratregion
1634240D2Got3731852112833447112833631Ratregion
1634455D2Got4001482118065755118065902Ratregion
1634762D2Got3271952109386878109387072Ratregion
7206720D3Mit271852117654356117654440Ratregion
7192218Sox23302121167110121167439Ratregion
7193060Sox21312121166010121166140Ratregion
7364905rs106982173029557100495571004Ratregion
7205884UniSTS:2570812592118831425118831683Ratregion
7205886px-34a8029781140197811573Ratregion
7206792RH1243264492109317489109317937Ratregion
5035771PMC165967P743329783437997834811Ratregion
5035957PMC317048P17492123277883123278631Ratregion
5038672BB2100121222101567304101567425Ratregion
5038754RH1273131912104913700104913890Ratregion
5038960RH1274321912118973293118973482Ratregion
5036217UniSTS:1423991432117458159117458301Ratregion
5036219D3Nds641372123444084123444220Ratregion
5036366UniSTS:143556702123851726123851795Ratregion
5036370Il716529647465896474822Ratregion
5036510Stk181912127692823127693013Ratregion
5036757AU0491061562113050675113050830Ratregion
5037121U859262292112283118112283450Ratregion
5035526C130041O22Rik39129842627298426662Ratregion
5035608D8S1385E11029542435295424461Ratregion
5035633A001Y041072100711192100711298Ratregion
5035697D6S15606032128284532128285134Ratregion
5033853RH1403631792127470660127470838Ratregion
5028741RH4595015429842638398426536Ratregion
5031524AU04804523429260305292603411Ratregion
5031524AU04804523429260305292603280Ratregion
5028845RH1425491122116433216116433327Ratregion
5034422BE1177721592112790367112790525Ratregion
5029201RH1439011972102311034102311230Ratregion
5029365RH1445202772106770215106770491Ratregion
5032105RH944181702124134489124134658Ratregion
5034814AA9429791792125289092125289270Ratregion
5029543BG3754471372103565231103565366Ratregion
5032253AU017667902104916849104916938Ratregion
5032349AI4514111222114385280114385401Ratregion
5035446BQ19355720229774135497741555Ratregion
5035466AW5320872112122478658122478868Ratregion
5027127U859332192110428205110428494Ratregion
5027145D1S28315512118722424118722974Ratregion
5029863AW5308731572121900390121900546Ratregion
5034884AI1697611332100224887100225019Ratregion
5034946AI1717421092119317898119317998Ratregion
5034980Agtr1a702105150594105150663Ratregion
5029937BF3946482242111293266111293489Ratregion
5029961BF3882361502120285249120285398Ratregion
5030209AW5320751512122869505122869655Ratregion
5032897RH1368881882122805421122805608Ratregion
5024974BB2028241112106734921106735031Ratregion
5030251BE11149516029825241598252574Ratregion
5030305BF3967351852122629750122629934Ratregion
5030305BF3967351852122508813122508997Ratregion
5030343AI7152961992122444825122445023Ratregion
5030373BI2942582502128471354128471603Ratregion
5033109RH1376302072107313042107313248Ratregion
5027769RH946701642102702584102702747Ratregion
5027811RH948359029647232396472412Ratregion
5033197RH1379411372104791208104791343Ratregion
5030617BE1137071582110363966110364124Ratregion
5025534RH1286962002104916771104916970Ratregion
5028105X941271862121166827121167012Ratregion
5028230D3Mit168922121155774121155865Ratregion
5030789BE1200441962119472142119472337Ratregion
5025762RH1295632002127985278127985477Ratregion
5028236D3Mit295862125792028125792113Ratregion
5033765RH1400402132107354833107355045Ratregion
5053727RH1428161312119152262119152392Ratregion
5056399RH1443562832124147669124147951Ratregion
5056703RH1445311552116272095116272249Ratregion
5051991RH947762842114444921114445204Ratregion
5052093RH948361052105016868105016972Ratregion
5054323RH1431581632119314027119314189Ratregion
5055401RH1437801652118915059118915530Ratregion
5055457RH1438121082115942122115942229Ratregion
5054679RH1433631052101566918101567022Ratregion
5055719RH14396326029978968299789941Ratregion
5057896BE1016801842104824100104824283Ratregion
5057988BF3864141512114346020114346170Ratregion
5055175RH14364914629369842493698569Ratregion
5058742BF3870161872116603575116603761Ratregion
5058792BE1024481532115788533115788685Ratregion
5059630BF3940481332116418327116418459Ratregion
505218118.MMHAP88FLF3.seq1932126791998126792190Ratregion
5055477RH1438241342116242777116242939Ratregion
5055477RH1438241342116242777116242910Ratregion
5052569AI3146681192101861756101861874Ratregion
5055829RH1440261042123330180123330283Ratregion
5052897RH14233715529428427494284428Ratregion
5059964BF3882391682121200185121200352Ratregion
5058242BF3868952132123895153123895365Ratregion
5058352AI1369051972107217748107217944Ratregion
5050432RH1340531822120284738120284919Ratregion
5053319RH1425792642122552530122552982Ratregion
5050762RH13424418529372398393724167Ratregion
5049918RH1337571832118717297118717479Ratregion
5054151RH1430592542116432801116433054Ratregion
5052789RH1422741542114386266114386419Ratregion
5051296RH1345522012105059330105059530Ratregion
5051346AW06122414729507787695078022Ratregion
5053357RH1426021382103928520103928657Ratregion
5050970RH1343632132119317149119317361Ratregion
5051088RH1344321852123766294123766478Ratregion
5044102RH1304112132122476887122477099Ratregion
5044102RH1304112132122476783122477099Ratregion
5044686RH1307461812119128877119129057Ratregion
5044740RH1307771832127705094127705276Ratregion
5041068RH1286442082115823680115823887Ratregion
5041296RH12877520929398170893981916Ratregion
5043540RH13008419129517351095173700Ratregion
5043710RH1301821862127827455127827640Ratregion
5043788RH1302271952120505187120506288Ratregion
5045008RH13093021029647632596476534Ratregion
5045628RH13128719329366648693666678Ratregion
5045672RH1313122062124058791124058996Ratregion
5045816RH1313952122112934719112934932Ratregion
5048702RH1330562042119057382119057585Ratregion
5044356RH1305561902134630547134630736Ratregion
5046478RH1317762152112902120112902334Ratregion
5046554RH13182021129647490196475111Ratregion
5047494RH13236018129526743195267611Ratregion
5046100RH1315582042112914469112914672Ratregion
5048998RH1332272202126275456126275675Ratregion
5048998RH1332272202125870661125870880Ratregion
5049478RH1335041952118974896118975090Ratregion
5048244RH1327911802122646640122646819Ratregion
5048244RH1327911802122525702122525881Ratregion
5048262RH1328011802116397345116397524Ratregion
5047254RH1322221942120516718120516911Ratregion
5039772RH1278981952114445184114445378Ratregion
5039830RH12793120929372431793724525Ratregion
5042452RH12944220629659337096593575Ratregion
5042896RH1297091882123397941123398128Ratregion
5039426RH12769921929285814492858362Ratregion
5041944RH12914918129659322596593405Ratregion
5043106RH1298362032123162503123162705Ratregion
7192186Sox21852121167199121167383Ratregion
5042738RH1296162182104916842104917059Ratregion
5040464RH12829819429369592393696116Ratregion
7193026Sox22042121165690121165893Ratregion
5040564RH1283562012123274736123274936Ratregion
5043014RH12977918829659328496594565Ratregion
5041466RH12887318629379591293797189Ratregion
5073828RH1376621272104946794104946920Ratregion
5072414RH1368352472122873289122873535Ratregion
5075890RH1388561392119311745119312641Ratregion
5076006RH1389232032119325942119326143Ratregion
5076256RH1390701342120530350120530483Ratregion
5076350RH1391241642117642862117643025Ratregion
5074496RH1380502072122892999122893205Ratregion
5077038RH1395232122127682654127682865Ratregion
5074742RH1381921982119516924119517121Ratregion
5077276RH1396632162113848442113848657Ratregion
5075962RH1388982042118859523118859726Ratregion
5076068RH13896017729648320096483376Ratregion
5075112RH13840518829382911993830619Ratregion
5079444RH14100119129468942594689615Ratregion
5079518RH1410442052130654530130654734Ratregion
5076620RH13928122629542286295423087Ratregion
5076410RH1391591202104458253104458372Ratregion
5077418RH1397451822101567565101567746Ratregion
5077462RH13977018129648320096483380Ratregion
5077480RH1397802152104043469104043683Ratregion
5079840RH1412331882104039514104039701Ratregion
5077728RH1399232022123348489123348690Ratregion
5078516RH1403881862104913872104914057Ratregion
5078660RH1404742102124060406124060615Ratregion
5079022RH1406892142107354354107354567Ratregion
5078512RH1403851902122476059122476248Ratregion
5070816RH1347221832118971802118971984Ratregion
5079258RH14087521629473329494733509Ratregion
5080300RH1415001822104802647104802828Ratregion
5080492RH1416102032118858839118859041Ratregion
5080502RH1416162172102687420102687636Ratregion
5073094RH1372331852116189150116189334Ratregion
5073100RH1372372012122550943122551795Ratregion
5074148RH13784913329903733699037468Ratregion
5071952RH1353801932120952113120952305Ratregion
5074228RH13789515129437440994374559Ratregion
5072214RH1367192162115353766115353981Ratregion
5072238RH1367331202124265670124265788Ratregion
5063358BF404163992124235343124235441Ratregion
5063374BI30178121329322765093227862Ratregion
5063424BF4042461732104041771104041943Ratregion
5063470BI3018801962126755107126755302Ratregion
5063474BI3018991862118776306118776491Ratregion
5064966BE1087941602110365999110366157Ratregion
5065012BF4054701982114345582114345779Ratregion
5066688AU04820920929667838296678590Ratregion
5066786AU04815119929907364799073817Ratregion
5066912AU0480762592133796138133796396Ratregion
5067032AU0480061172108000804108000920Ratregion
5067472AU0477231572135246480135246636Ratregion
5067472AU0477231572135220435135220591Ratregion
5067724AU04757420429584140195841604Ratregion
5068062AU0473701512104865822104865972Ratregion
5068078AU0473611972108118095108118286Ratregion
5068356AU04719616829498691594987082Ratregion
5068372AU0471862612106772444106772698Ratregion
5068582AU0470591462125042036125042181Ratregion
5068592AU0470531792127829308127829486Ratregion
5068646AU0470122212100706768100706988Ratregion
5068700AU0469879929902238199022479Ratregion
5068700AU0469879929893842098938518Ratregion
5070019RH944211652114445238114445402Ratregion
5068890AU0468612762128447462128447732Ratregion
5069556AU0464181262127437432127437552Ratregion
5069670AU0463481602119387583119387742Ratregion
5070227RH945451822123162496123162677Ratregion
5070342AI504870832105059505105059587Ratregion
5070344AU0676481202119324210119324329Ratregion
5069134AU0467022242112012004112012227Ratregion
5069718AU0463153002133399448133399747Ratregion
5070540RH1345602122123276253123277058Ratregion
5062018AI45412618829542441395424600Ratregion
5062124BE1062332032121160019121160221Ratregion
5060510BE1102441592119315326119315484Ratregion
5062310BI28866720529436626694366470Ratregion
5062766AW53437915829469045894690615Ratregion
5064410BI3021391772118623297118623473Ratregion
5060258AI11183420329433036594330567Ratregion
5063498BE1077142002127875268127875467Ratregion
5063598BE10781515029532352795323676Ratregion
5063758AI0438019229826796898268059Ratregion
5065198BE1211341962119335930119336125Ratregion
5065296AA963575972118861244118861340Ratregion
5064312BF3990711412118861788118861928Ratregion
5066096BE1168262052123344829123345033Ratregion
5061068AW5320791752107358275107358449Ratregion
5061164BE1110291692127981738127981906Ratregion
5066176AA92595115629504026095040415Ratregion
5066190BF4075071212117963162117963282Ratregion
5061316BI29372820829455226594552472Ratregion
5061334BF3962401352100718523100718657Ratregion
5064784BF3997151252119329265119329389Ratregion
5061428BF3963931682127679685127679851Ratregion
5086929BQ2074081522114290062114290213Ratregion
5087040AI00785517129842701498427184Ratregion
5087107AI0079551602115997940115998099Ratregion
5087136AA8937471192123784225123784343Ratregion
5087440PMC165967P845129780676297807212Ratregion
5087486PMC207566P28542123281203123282056Ratregion
5087492PMC207566P51692123282186123282354Ratregion
5086586BM38587017829469144094691617Ratregion
5082829BI2811661982120520007120520204Ratregion
5087442PMC165967P943929777016197770599Ratregion
5087506PMC212738P14932123276618123277110Ratregion
5089899AU04942915129470241994702569Ratregion
5088110Sox29602121165500121166459Ratregion
5083403BF39107018229448984194490022Ratregion
5088503AU0486082712100630021100630291Ratregion
5089501AU0491931732115791857115792029Ratregion
5089507AU0491972472109260432109260678Ratregion
5090781AU0499592952125483679125483974Ratregion
5083911AI4066222382118916277118916514Ratregion
5083915AI175033942115863282115863375Ratregion
5088879AU0488242362121252217121252452Ratregion
5089637AU0492731722102753172102753343Ratregion
5090477AU0497732142105598767105598975Ratregion
5090477AU0497732142105409517105409725Ratregion
5090599AU0498481972112775086112775282Ratregion
5084082AI23323321429826878298268995Ratregion
5084710AI1026902102122479131122479340Ratregion
5084292AA8501001662123275284123275453Ratregion
5085048UniSTS:2563876912105150239105150929Ratregion
5087983UniSTS:14372202133882140133882319Ratregion
5082339BI2745702052120519947120520151Ratregion
5082339BI2745702052120513163120514030Ratregion
5085080AW5331181962103926865103927060Ratregion
5085507BE1009161882119316029119316216Ratregion
5090667AU049889492121121110121121224Ratregion
5090667AU049889492121121110121121164Ratregion
5088525AU0486212102114405515114405724Ratregion
5080984RH14189618429366807093668253Ratregion
5085196AW5326042112114382117114382327Ratregion
5088679AU0487122472115822720115822966Ratregion
5088719AU0487378429755036297550445Ratregion
5088725AU0487401142129175097129175210Ratregion
5088745AU0487531762104965323104965498Ratregion
5089069AU0489361682103659038103659205Ratregion
5085778AW5277411542110293820110293973Ratregion
5084576AA9457161662122445707122445872Ratregion
5082763BF3900432432125743464125743706Ratregion
5086191AI1787641522122805976122806127Ratregion
5086224AI1018441862118718020118718205Ratregion
5083119BF3908061612124070790124070950Ratregion
5083347AA818143942113026734113026827Ratregion
5081595BF420674982127365918127366015Ratregion
5085189AW5340152162128512163128512377Ratregion
5085198AI0100811792127985144127985322Ratregion
5083457BF3913231332124056023124056155Ratregion
5086837AA8011081812113111589113111769Ratregion
5083815AA892399932104040591104040683Ratregion
5083913AI4066271462115942157115942302Ratregion
5502645RH1263012042124154389124154592Ratregion
5503794UniSTS:4711044122121165875121166286Ratregion
5503910UniSTS:2563856412105150289105150929Ratregion
5503550ZFH4__493877329842618298426954Ratregion
5504008px-1e51052125206411125206515Ratregion
5504298D8S1388E9029542428195424370Ratregion
5504552PMC304100P21222121166080121166201Ratregion
5504873ha28479132132236125132237079Ratregion
5506387UniSTS:4791116302120520193120520822Ratregion
5506825G462762712118220101118220371Ratregion
5507163UniSTS:2249502122128233788128233999Ratregion
5507197UniSTS:22524619629378258693782781Ratregion
5506993fi13b11.x102112134988112136067Ratregion
5499499stSG6024345052126036168126036672Ratregion
5499783UniSTS:2346592212122637537122637757Ratregion
5499783UniSTS:2346592212122516600122516820Ratregion
5499775UniSTS:23463931029468942094689729Ratregion
5500264D8S1572E712102688304102688375Ratregion
5501109PMC138456P21182123281101123281218Ratregion
5501299CP-000F2122104762011104763284Ratregion
5501361D3S1232892121155765121155853Ratregion
5505016Mirn124a-21042102311603102311706Ratregion
5501638UNH10876152129773460129774074Ratregion
5501918MARC_17479-17480:1016465460:11222116207993116209150Ratregion
5506060UniSTS:4982663142127676296127676609Ratregion
5506591KIAA11091112123754300123754410Ratregion
550223724.MMHAP12FLH3.seq1882122627922122628109Ratregion
550223724.MMHAP12FLH3.seq1882122506985122507172Ratregion
5502705Tenr02123791572123792617Ratregion
5502776GYG11172104952421104952537Ratregion
5502849Bhlhb58712102687065102687935Ratregion
Position Markers

Peak: (D2Rat280)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22111,362,447 - 111,362,592 (+)MAPPER
Rnor_6.02114,164,800 - 114,164,944NCBI
Rnor_5.02133,866,023 - 133,866,167UniSTS
Celera2106,551,521 - 106,551,665UniSTS
SHRSP x BN Map239.8998RGD
SHRSP x BN Map239.8998UniSTS
Cytogenetic Map2q24UniSTS


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61355Bp36Blood pressure QTL 362.9blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)23127638105149020Rat
10755499Bp389Blood pressure QTL 3892.61arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)216679272245624402Rat
1302794Stl27Serum triglyceride level QTL 274.40.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)223837491149614623Rat
1358894Kidm24Kidney mass QTL 244.03kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)223837491169852800Rat
1358899Kidm23Kidney mass QTL 233.88kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)223837491169852800Rat
1358901Cm38Cardiac mass QTL 382heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)223837491169852800Rat
1358904Cm39Cardiac mass QTL 392.26heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)223837491169852800Rat
1358910Kidm27Kidney mass QTL 275.77kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)223837491169852800Rat
1358911Kidm28Kidney mass QTL 285.42kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)223837491169852800Rat
1358913Cm41Cardiac mass QTL 412.73heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)223837491218957222Rat
1358917Cm42Cardiac mass QTL 422.82heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)223837491218957222Rat
1358887Bw50Body weight QTL 502.39body mass (VT:0001259)body weight (CMO:0000012)223837719169852670Rat
1358908Bw49Body weight QTL 493.36body mass (VT:0001259)body weight (CMO:0000012)223837719169852670Rat
1354603Bp243Blood pressure QTL 2433.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)226186097135654963Rat
2290453Scl55Serum cholesterol level QTL 552.83blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)226186097142053534Rat
12879841Cm87Cardiac mass QTL 870.026heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)227161361148295267Rat
12879842Cm88Cardiac mass QTL 880.042heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)227161361148295267Rat
12879843Am3Aortic mass QTL 30.016aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)227161361148295267Rat
12879844Kidm62Kidney mass QTL 620.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)227161361148295267Rat
2306903Bp336Blood pressure QTL 3360.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)236245223112175725Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)240171834105089682Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)240171834105089682Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)240171834105089682Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)240171834105089682Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)240171834105089682Rat
2293835Kiddil5Kidney dilation QTL 53.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242776916169852800Rat
2293843Kiddil6Kidney dilation QTL 63.1kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242776916195645082Rat
1298085Bp165Blood pressure QTL 1650.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242776916217498710Rat
1298074Bp164Blood pressure QTL 1640.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242776916217498710Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)243133606217498545Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)243133606217498545Rat
2293676Bmd19Bone mineral density QTL 1910.70.0001femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)243141290114164944Rat
2293682Bmd24Bone mineral density QTL 248.90.0001femur mineral mass (VT:0010011)cortical volumetric bone mineral density (CMO:0001730)243141290114164944Rat
2293671Bss44Bone structure and strength QTL 4410.970.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)243141290154583160Rat
1354601Slep1Serum leptin concentration QTL 15.39blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)243149788198704485Rat
631266Bp132Blood pressure QTL 1320.0005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)246537589217498710Rat
1331760Bp206Blood pressure QTL 2063.62454arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)256244671217498710Rat
1558648Smcn1Smooth muscle cell number QTL 10.039blood vessel smooth muscle cell quantity (VT:0010525)aorta smooth muscle cell count per unit vessel length (CMO:0001646)260131410135646395Rat
5684990Bmd82Bone mineral density QTL 822.8tibia mineral mass (VT:1000283)bone mineral content (CMO:0001554)260325352106432915Rat
5684996Bmd85Bone mineral density QTL 854.70.024tibia mineral mass (VT:1000283)bone mineral density (CMO:0001226)260325352106432915Rat
61438Cia7Collagen induced arthritis QTL 74.60.0001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)260325352147522851Rat
631500Bp99Blood pressure QTL 992.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)260325686105059293Rat
1578777Stresp15Stress response QTL 1520.05blood aldosterone amount (VT:0005346)plasma aldosterone level (CMO:0000551)261924251106924251Rat
1298080Bp163Blood pressure QTL 1630.02arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266828049217498710Rat
1354648Bp239Blood pressure QTL 2390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266828236243550655Rat
1358900Bw48Body weight QTL 484.88body mass (VT:0001259)body weight (CMO:0000012)268865414169852800Rat
1581578Cm49Cardiac mass QTL 494.90.01heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)268866454149614466Rat
7411551Bw131Body weight QTL 13129.60.001body mass (VT:0001259)body weight gain (CMO:0000420)270132175115132175Rat
2317041Aia14Adjuvant induced arthritis QTL 143.29joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)271495404116495404Rat
1359034Bp274Blood pressure QTL 274arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)27568749596556760Rat
1359034Bp274Blood pressure QTL 274arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)27568749596556760Rat
1354605Rf48Renal function QTL 482.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)275687495221880419Rat
61465Bp13Blood pressure QTL 133.3blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)278321410105089682Rat
61465Bp13Blood pressure QTL 133.3blood pressure trait (VT:0000183)diastolic blood pressure (CMO:0000005)278321410105089682Rat
631198Cm22Cardiac mass QTL 224.30.0008heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)278321410158159410Rat
61374Edpm2Estrogen-dependent pituitary mass QTL 24.420.86pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)278321410217498710Rat
2299162Iddm32Insulin dependent diabetes mellitus QTL 322.36blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)280631950149614623Rat
61392Bp6Blood pressure QTL 67arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)282574487127574487Rat
1598865Bp296Blood pressure QTL 2962.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)283656855128656855Rat
8662832Vetf7Vascular elastic tissue fragility QTL 73.5aorta elastin amount (VT:0003905)aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)283754907237610852Rat
1354622Kidm16Kidney mass QTL 163kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)283819608239166203Rat
1354649Kidm17Kidney mass QTL 172.9kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)283819608243901375Rat
1578772Stresp14Stress response QTL 1450.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)284424139132130578Rat
2300165Bmd49Bone mineral density QTL 494.80.0001lumbar vertebra mineral mass (VT:0010511)bone mineral density (CMO:0001226)291664872136664872Rat
2300170Bmd45Bone mineral density QTL 4512.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)291664872136664872Rat
2300185Bmd46Bone mineral density QTL 468.40.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)291664872136664872Rat
7207808Bmd89Bone mineral density QTL 894.1femur strength trait (VT:0010010)femoral neck ultimate force (CMO:0001703)291664872136664872Rat
1558653Prcr1Prostate cancer resistance QTL 15prostate integrity trait (VT:0010571)area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)293995316169852800Rat
1598862Glom9Glomerulus QTL 93.5kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)295946719140946719Rat
1598863Cm65Cardiac mass QTL 652.3heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)295946719140946719Rat
2317886Alcrsp23Alcohol response QTL 232.40.63response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)296844330141844330Rat
9589093Slep10Serum leptin concentration QTL 103.840.001blood leptin amount (VT:0005667)plasma leptin level (CMO:0000781)2102356980147356980Rat
631566Bp90Blood pressure QTL 900.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2108880910153880910Rat
8662836Vetf8Vascular elastic tissue fragility QTL 80.66thoracic aorta molecular composition trait (VT:0010568)aorta wall extracellular elastin dry weight to aorta wall extracellular collagen weight ratio (CMO:0002003)2110965721155965721Rat
1581552Pur12Proteinuria QTL 125.190.0009total urine protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)2115721880154182196Rat
631507Bp105Blood pressure QTL 1050.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2116075644228737869Rat
634308Sach6Saccharin preference QTL 64.9taste sensitivity trait (VT:0001986)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)2116075644228737869Rat
1359035Bp276Blood pressure QTL 276arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)2118446646149614623Rat
1359035Bp276Blood pressure QTL 276arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2118446646149614623Rat
1359030Bp277Blood pressure QTL 277arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)2118446646200453484Rat
1359030Bp277Blood pressure QTL 277arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2118446646200453484Rat
1578648Bss11Bone structure and strength QTL 114.7femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)2118446646227707979Rat
1554319Bmd2Bone mineral density QTL 213.40.0001lumbar vertebra area (VT:0010570)lumbar vertebra cross-sectional area (CMO:0001689)2118446793228582621Rat
1354594Despr10Despair related QTL 100.00000249locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)2119789823164789823Rat
5135226Leukc2Leukocyte quantity QTL 2eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)2121750419155965721Rat
1582257Gluco21Glucose level QTL 213.10.0035blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)2121750419169852800Rat
738007Anxrr7Anxiety related response QTL 74.4exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)2123456539168456539Rat
1358360Sradr2Stress Responsive Adrenal Weight QTL 210.24adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)2133399373173020198Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general number of animals used: 405 males and 423 females from F2 progeny 2300109
qtl_general measurement method: at 26 weeks of age L3-L5 vertebrae were removed and frozen at -20oC, later these were scanned using a fan-beam Hologic QDR 4500A DXA machine with Hologic version 11.2:3 software 2300109
qtl_general software package: R/qtl software 2300109