Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Setd7 (SET domain containing 7, histone lysine methyltransferase) Rattus norvegicus
Analyze
Symbol: Setd7
Name: SET domain containing 7, histone lysine methyltransferase
Description: Exhibits chromatin binding activity. Involved in positive regulation of transcription, DNA-templated and response to ethanol. Localizes to the nucleus. Used to study extrahepatic cholestasis. Orthologous to human SETD7 (SET domain containing 7, histone lysine methyltransferase); PARTICIPATES IN carnitine biosynthetic pathway; histone modification pathway; methionine cycle/metabolic pathway; INTERACTS WITH 3-chloropropane-1,2-diol; 6-propyl-2-thiouracil; aldehydo-D-glucose.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: histone-lysine N-methyltransferase SETD7; LOC689954; SET domain containing (lysine methyltransferase) 7; similar to Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7 (Histone H3-K4 methyltransferase) (H3-K4-HMTase) (SET domain-containing protein 7)
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02140,576,188 - 140,618,405 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02160,051,126 - 160,093,343 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42140,413,802 - 140,456,579 (-)NCBIRGSC3.4rn4RGSC3.4
Celera2130,058,161 - 130,100,836 (-)NCBICelera
Cytogenetic Map2q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Setd7
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1586346
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.