Gene: Trpc4 (transient receptor potential cation channel, subfamily C, member 4) Rattus norvegicus
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Symbol: Trpc4
Name: transient receptor potential cation channel, subfamily C, member 4
Description: ENCODES a protein that exhibits calcium channel activity; beta-catenin binding (ortholog); cadherin binding (ortholog); INVOLVED IN calcium ion transport; regulation of calcium ion transport; calcium ion import (ortholog); ASSOCIATED WITH Visceral Pain; Kaufman Oculocerebrofacial Syndrome (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm; integral component of plasma membrane; basolateral plasma membrane (ortholog); INTERACTS WITH 17alpha-ethynylestradiol; 6-propyl-2-thiouracil; benzo[a]pyrene
AGR Description: Exhibits calcium channel activity; involved in calcium ion transport and regulation of calcium ion transport; localizes to the cytoplasm and integral component of plasma membrane; predicted to colocalize with the cell-cell junction; orthologous to human TRPC4 (transient receptor potential cation channel subfamily C member 4).
Merged Description: Exhibits calcium channel activity; involved in calcium ion transport and regulation of calcium ion transport; localizes to the cytoplasm and integral component of plasma membrane; predicted to colocalize with the cell-cell junction; orthologous to human TRPC4 (transient receptor potential cation channel subfamily C member 4); INTERACTS WITH 17alpha-ethynylestradiol; 6-propyl-2-thiouracil; benzo[a]pyrene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: capacitative calcium entry channel 1; CCE1; short transient receptor potential channel 4; transient receptor potential 4; transient receptor potential channel 4; transient receptor potential protein 4; transient receptor protein 4; Trp4; Trrp4
Orthologs:
Homo sapiens (human) : TRPC4 (transient receptor potential cation channel subfamily C member 4)  HGNC  Alliance
Mus musculus (house mouse) : Trpc4 (transient receptor potential cation channel, subfamily C, member 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Trpc4 (transient receptor potential cation channel subfamily C member 4)
Pan paniscus (bonobo/pygmy chimpanzee) : TRPC4 (transient receptor potential cation channel subfamily C member 4)
Canis lupus familiaris (dog) : TRPC4 (transient receptor potential cation channel subfamily C member 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Trpc4 (transient receptor potential cation channel subfamily C member 4)
Sus scrofa (pig) : TRPC4 (transient receptor potential cation channel subfamily C member 4)
more info ...
Allele / Splice: Trpc4_v1   Trpc4_v2   Trpc4Tn(sb-T2/Bart3)2.192Mcwi  
Genetic Models: F344-Trpc4Tn(sb-T2/Bart3)2.192Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02143,433,102 - 143,605,757 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02163,115,873 - 163,282,223 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42143,350,286 - 143,485,716 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12143,254,891 - 143,435,776 (+)NCBI
Celera2132,835,300 - 132,958,908 (+)NCBICelera
Cytogenetic Map2q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model

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References - uncurated
RGD Disease Portals

Genomics

Candidate Gene Status
Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

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Nomenclature History
RGD Curation Notes
  
More on Trpc4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 621276
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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