Gene: Supt20h (SPT20 homolog, SAGA complex component) Rattus norvegicus
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Symbol: Supt20h
Name: SPT20 homolog, SAGA complex component
Description: ENCODES a protein that exhibits transcription coregulator activity (inferred); INVOLVED IN positive regulation of gluconeogenesis by positive regulation of transcription from RNA polymerase II promoter (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH rheumatoid arthritis (ortholog); FOUND IN fibrillar center (ortholog); SAGA-type complex (ortholog); INTERACTS WITH copper atom; copper(0); copper(2+)
AGR Description: Predicted to have transcription coregulator activity; predicted to be involved in positive regulation of gluconeogenesis by positive regulation of transcription from RNA polymerase II promoter; predicted to localize to the SAGA complex and fibrillar center; orthologous to several human genes including SUPT20H (SPT20 homolog, SAGA complex component).
Merged Description: Predicted to have transcription coregulator activity; predicted to be involved in positive regulation of gluconeogenesis by positive regulation of transcription from RNA polymerase II promoter; predicted to localize to the SAGA complex and fibrillar center; orthologous to several human genes including SUPT20H (SPT20 homolog, SAGA complex component); PARTICIPATES IN RNA polymerase II transcription initiation pathway; INTERACTS WITH copper atom; copper(0); copper(2+).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Fam48a; family with sequence similarity 48, member A; LOC361946; RGD1307812; similar to transcription factor (p38 interacting protein); suppressor of Ty 20; Supt20; transcription factor (p38 interacting protein); transcription factor SPT20 homolog
Orthologs:
Homo sapiens (human) : SUPT20H (SPT20 homolog, SAGA complex component)  HGNC  Alliance
Mus musculus (house mouse) : Supt20 (suppressor of Ty 20)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Supt20h (SPT20 homolog, SAGA complex component)
Pan paniscus (bonobo/pygmy chimpanzee) : SUPT20H (SPT20 homolog, SAGA complex component)
Canis lupus familiaris (dog) : SUPT20H (SPT20 homolog, SAGA complex component)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Supt20h (SPT20 homolog, SAGA complex component)
Sus scrofa (pig) : SUPT20H (SPT20 homolog, SAGA complex component)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02143,892,609 - 143,925,733 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02160,337,768 - 160,370,787 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42143,921,831 - 143,955,032 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12143,871,793 - 143,904,995 (+)NCBI
Celera2133,382,206 - 133,415,296 (+)NCBICelera
Cytogenetic Map2q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Supt20h
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307812
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.