Vetf8 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Vetf8 (Vascular elastic tissue fragility QTL 8) Rattus norvegicus

Symbol: Vetf8
Name: Vascular elastic tissue fragility QTL 8
RGD ID: 8662836
Trait: thoracic aorta molecular composition trait   (VT:0010568)    
Measurement Type: aorta wall extracellular elastin dry weight to aorta wall extracellular collagen weight ratio   (CMO:0002003)    
LOD Score: 0.66
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22104,559,726 - 149,559,726RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.02110,965,721 - 155,965,721RGD_MAPPER_PIPELINERnor6.0
Rnor_5.02130,354,471 - 175,354,471RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.42110,102,371 - 155,102,371RGD_MAPPER_PIPELINERGSC3.4
Cross Type: backcross
Strains Crossed: BN/Rj LOU/MBbb 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Rat Strain
BN/Rj  (IEA)
LOU/MBbb  (IEA)

References

References - curated
1. Kota L, etal., Physiol Genomics. 2007 Jun 19;30(1):17-25. Epub 2007 Mar 13.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
41127021LOC120100786uncharacterized LOC1201007862104579402104641521Rat
41163397LOC12010078560S ribosomal protein L36-like2104583202104583569Rat
41366980LOC120100784spindlin-1-like2104591976104592840Rat
1560053Tbl1xr1TBL1X receptor 12104788950104929055Rat
41053528LOC120101009zinc finger protein 296-like2104997253104998556Rat
41112660LOC120101351small nucleolar RNA SNORA172105199664105199775Rat
41186814Htd2hydroxyacyl-thioester dehydratase type 22105222958105223419Rat
1598354LOC295112similar to heat shock protein 82105493828105495874Rat
41043122LOC120101398U2 spliceosomal RNA2105678120105678309Rat
1587056LOC680827similar to Mitogen-activated protein kinase 6 (Extracellular signal-regulated kinase 3) (ERK-3) (p55-MAPK)2106158901106167330Rat
7590540LOC102551358uncharacterized LOC1025513582106301790106305272Rat
1565147Naaladl2N-acetylated alpha-linked acidic dipeptidase-like 22106639146107992218Rat
1560081LOC499584LRRGT002022107519605107542884Rat
41318849LOC120101275small nucleolar RNA SNORA482107574094107574240Rat
621117Nlgn1neuroligin 12108256236109181530Rat
11461857LOC108350212uncharacterized LOC1083502122108700309108722522Rat
41328011LOC120101250small nucleolar RNA SNORA42/SNORA80 family2108935155108935294Rat
41069193LOC120101010glyceraldehyde-3-phosphate dehydrogenase-like2109075012109075960Rat
41385681LOC120100571cullin-2-like2109228805109231740Rat
41310748LOC120101266small nucleolar RNA SNORA482109290944109291087Rat
1563726Spata16spermatogenesis associated 162109485287109865665Rat
41375602LOC120101388U1 spliceosomal RNA2109874776109874920Rat
7515013LOC102555118uncharacterized LOC1025551182109923841109934955Rat
1308524Ect2epithelial cell transforming 22109975813110037911Rat
41199834LOC120101329small nucleolar RNA SNORA172109994487109994611Rat
1311104Nceh1neutral cholesterol ester hydrolase 12110074985110135592Rat
1589592LOC502522similar to mitochondrial ribosomal protein L542110138456110138965Rat
41026528LOC120100787uncharacterized LOC1201007872110168359110176379Rat
7552390LOC102555450uncharacterized LOC1025554502110180475110181932Rat
628734Tnfsf10TNF superfamily member 102110199835110227239Rat
9303217LOC103691520U1 small nuclear ribonucleoprotein C pseudogene2110249020110249711Rat
621397Ghsrgrowth hormone secretagogue receptor2110268489110271865Rat
1311673Fndc3bfibronectin type III domain containing 3B2110311439110617504Rat
41066188LOC120100788uncharacterized LOC1201007882110414980110421799Rat
6501927LOC100909721cyclin-dependent kinase 1-like2110685743110688183Rat
11461178LOC10835023760S ribosomal protein L17 pseudogene2110714287110716284Rat
1563109Tmem212transmembrane protein 2122110775950110813313Rat
7656055LOC102555566uncharacterized LOC1025555662110790193110795730Rat
3349Pld1phospholipase D12110849205111047692Rat
41193090LOC120100789uncharacterized LOC1201007892111022776111026560Rat
40969953LOC12010079060S ribosomal protein L15-like2111062794111073127Rat
41109826LOC120100792uncharacterized LOC1201007922111081877111107974Rat
41320266LOC120100791uncharacterized LOC1201007912111084532111099039Rat
41049202LOC120101089uncharacterized LOC1201010892111173736111184657Rat
1561817TnikTRAF2 and NCK interacting kinase2111184352111587993Rat
3705Slc2a2solute carrier family 2 member 22111609798111639930Rat
1306196Eif5a2eukaryotic translation initiation factor 5A22111728587111746087Rat
1309517Rpl22l1ribosomal protein L22 like 12111754687111756623Rat
1594375Slc7a14solute carrier family 7, member 142112065286112171319Rat
41175922LOC120101379U1 spliceosomal RNA2112190391112190553Rat
71081Cldn11claudin 112112207745112221050Rat
621399SkilSKI-like proto-oncogene2112247047112275176Rat
7523289LOC102547647uncharacterized LOC1025476472112308364112309498Rat
7608682LOC102547718uncharacterized LOC1025477182112309535112312861Rat
620961Prkciprotein kinase C, iota2112321919112382305Rat
6495614LOC10091097660S ribosomal protein L24-like2112399234112405155Rat
1307998Phc3polyhomeotic homolog 32112408709112483719Rat
40951160LOC120100793uncharacterized LOC1201007932112464844112475848Rat
1560200Gpr160G protein-coupled receptor 1602112483364112563072Rat
1308862Sec62SEC62 homolog, preprotein translocation factor2112570810112607576Rat
41014742LOC120100794uncharacterized LOC1201007942112624574112639790Rat
1308931Samd7sterile alpha motif domain containing 72112624942112639549Rat
1583267Gpx2-ps1glutathione peroxidase 2, pseudogene 12112645776112646636Rat
41079209LOC120100795uncharacterized LOC1201007952112654970112670357Rat
1583237LOC685065similar to heat shock protein 82112677634112680165Rat
41187843LOC120101011heat shock cognate 71 kDa protein-like2112694872112700652Rat
1561499Lrrc31leucine rich repeat containing 312112702844112725431Rat
2323202Lrriq4leucine-rich repeats and IQ motif containing 42112729298112756338Rat
1565052Lrrc34leucine rich repeat containing 342112752294112774463Rat
1307889Mynnmyoneurin2112779654112797188Rat
11410912Trnav-aac1transfer RNA valine (anticodon AAC) 12112797857112797929Rat
1561457Actrt3actin-related protein T32112799061112801021Rat
727802Terctelomerase RNA component2112815654112816041Rat
11417786LOC108350239serine/arginine-rich splicing factor 7 pseudogene2112821804112822748Rat
40927050LOC120100572uncharacterized LOC1201005722112859750112862038Rat
40958933LOC120101297small nucleolar RNA SNORA172112863681112863811Rat
1310997MecomMDS1 and EVI1 complex locus2112909353113464583Rat
41350943LOC120100796uncharacterized LOC1201007962113072218113085970Rat
1307225Egfem1EGF-like and EMI domain containing 12113721236114324547Rat
2325355Mir551bmicroRNA 551b2113989203113989300Rat
631398Kcnmb2potassium calcium-activated channel subfamily M regulatory beta subunit 22114670027114975406Rat
40930350LOC120101259small nucleolar RNA SNORA482115082698115082841Rat
620134Zmat3zinc finger, matrin type 32115106050115136863Rat
620916Pik3caphosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha2115175275115249034Rat
1311852Kcnmb3potassium calcium-activated channel subfamily M regulatory beta subunit 32115255788115270142Rat
1585689Zfp639zinc finger protein 6392115292431115305798Rat
621460Mfn1mitofusin 12115313380115359651Rat
1359321Gnb4G protein subunit beta 42115360746115400680Rat
7733168LOC102546477uncharacterized LOC1025464772115436848115439292Rat
41174350LOC120100797uncharacterized LOC1201007972115454205115463343Rat
41403567LOC120101270small nucleolar RNA SNORA482115455806115455946Rat
1307747Actl6aactin-like 6A2115492374115508401Rat
1307531Mrpl47mitochondrial ribosomal protein L472115507842115520093Rat
1305909Ndufb5NADH:ubiquinone oxidoreductase subunit B52115519248115533589Rat
40931824LOC120101231small nucleolar RNA SNORA702115536406115536531Rat
1306044Usp13ubiquitin specific peptidase 132115576912115689153Rat
708407Pex5lperoxisomal biogenesis factor 5-like2115694868115908338Rat
40934532LOC120100798uncharacterized LOC1201007982115875669115907955Rat
41095389LOC120100799uncharacterized LOC1201007992115921265115935617Rat
7538134LOC102549153uncharacterized LOC1025491532115935747115964267Rat
41055679LOC120101273small nucleolar RNA SNORA482116165324116165449Rat
2323670LOC100359524arginine/serine-rich coiled-coil 22116424180116425501Rat
1310045Ttc14tetratricopeptide repeat domain 142116653543116665072Rat
1306277Ccdc39coiled-coil domain containing 392116665261116703364Rat
11425228LOC108350240uncharacterized LOC1083502402116798678116804305Rat
41198720LOC120101341small nucleolar RNA SNORA172116803654116803785Rat
41010119LOC120100800uncharacterized LOC1201008002116825354116880012Rat
1311733Fxr1FMR1 autosomal homolog 12116884167116937586Rat
1560220Dnajc19DnaJ heat shock protein family (Hsp40) member C192116923272116945312Rat
9202401LOC103691527uncharacterized LOC1036915272116967994117589148Rat
41021129LOC120100801peptidyl-prolyl cis-trans isomerase D-like2117022912117024754Rat
11453452LOC108349992uncharacterized LOC1083499922117170935117210196Rat
41289236LOC120100802uncharacterized LOC1201008022117368023117386859Rat
1588992LOC685894similar to heterogeneous nuclear ribonucleoprotein A32117500942117501994Rat
1565646Sox2SRY-box transcription factor 22117536929117539338Rat
11438648LOC108350241uncharacterized LOC1083502412117604873117615829Rat
41183565LOC120100803uncharacterized LOC1201008032117717939117769039Rat
11440273LOC108349993uncharacterized LOC1083499932117917466117923638Rat
41120827LOC120100573uncharacterized LOC1201005732117933586117941915Rat
41366851LOC120101012RNA binding motif protein, X-linked-like-12118217422118225582Rat
6504224LOC100909397PRAME family member 17-like2118236522118237038Rat
2323451LOC100359789hypothetical LOC1003597892118373339118374187Rat
41327895LOC120100574gamma-aminobutyric acid receptor-associated protein-like 22118499300118500311Rat
41355076LOC120101180U6 spliceosomal RNA2118570694118570798Rat
41043477LOC120100804uncharacterized LOC1201008042118573599118581782Rat
1561719Atp11bATPase phospholipid transporting 11B (putative)2118585348118691076Rat
1309668Dcun1d1defective in cullin neddylation 1 domain containing 12118721275118772606Rat
7631924LOC102553085uncharacterized LOC1025530852118767266118780506Rat
1310615Mccc1methylcrotonyl-CoA carboxylase subunit 12118799147118851181Rat
1585492Ccdc144bcoiled-coil domain containing 144B2118862790118924638Rat
1561709RGD1561709similar to ribosomal protein S182118892149118894037Rat
727973Acad9acyl-CoA dehydrogenase family, member 92118943170118966150Rat
2323100Zfp267zinc finger protein 2672119017244119035885Rat
41098583LOC120100805surfeit locus protein 6-like2119017398119027282Rat
1304917Arslarylsulfatase L2119038803119047579Rat
728380Qrfprpyroglutamylated RFamide peptide receptor2119053511119096792Rat
41370461LOC120100628POU domain, class 5, transcription factor 1-like2119087448119088134Rat
2120Anxa5annexin A52119314007119344703Rat
11384727Smim43small integral membrane protein 432119366977119386664Rat
1307888Exosc9exosome component 92119416028119426981Rat
621059Ccna2cyclin A22119427239119433645Rat
1309264Bbs7Bardet-Biedl syndrome 72119434760119474665Rat
61973Trpc3transient receptor potential cation channel, subfamily C, member 32119481313119619333Rat
1593209LOC365768similar to 60S ribosomal protein L72119579381119580218Rat
1307100RGD1307100similar to RIKEN cDNA D630029K192119708114119924697Rat
40993430LOC120100806THUMP domain-containing protein 1-like2119841868119842977Rat
1359309Adad1adenosine deaminase domain containing 12119948809120005920Rat
620047Il2interleukin 22120004862120009566Rat
1307384Il21interleukin 212120119598120126941Rat
1586489Cetn4centrin 42120199951120203311Rat
1561608Bbs12Bardet-Biedl syndrome 122120203396120221024Rat
2609Fgf2fibroblast growth factor 22120236328120290673Rat
621356Nudt6nudix hydrolase 62120289908120306197Rat
1310478Spata5spermatogenesis associated 52120306412120497707Rat
7510030LOC10254676760S ribosomal protein L29-like2120447434120447890Rat
41320820LOC120101257small nucleolar RNA SNORA512120460702120460834Rat
11433166LOC10835024260S ribosomal protein L7a pseudogene2120515068120515888Rat
1309293Spry1sprouty RTK signaling antagonist 12120557276120561918Rat
41127827LOC120101013translocon-associated protein subunit delta-like2120622463120625865Rat
41101418LOC120101158U6 spliceosomal RNA2120627911120628017Rat
11469315LOC108349999glyceraldehyde-3-phosphate dehydrogenase pseudogene2120637580120646553Rat
1592058LOC361937similar to Galectin-92120683705120684762Rat
11513955LOC108350243uncharacterized LOC1083502432120709996120711737Rat
41115179LOC120101292small nucleolar RNA SNORA172120737785120737921Rat
11356258LOC10835000060S ribosomal protein L26 pseudogene2120769981120770431Rat
1585003LOC294985similar to 3-phosphoglycerate dehydrogenase2120910507120917522Rat
41183015LOC120101309small nucleolar RNA SNORA172120976196120976326Rat
41045573LOC120100575uncharacterized LOC1201005752121117806121124162Rat
11379162LOC108350184keratin-associated protein 4-4-like2121142630121143406Rat
11373430LOC10835018540S ribosomal protein S6-like2121167632121248902Rat
1564378RGD1564378similar to 60S ribosomal protein L23a2121429593121434236Rat
1311665Ankrd50ankyrin repeat domain 502121466275121500758Rat
9384455LOC103691533uncharacterized LOC1036915332121577718121606017Rat
41284427LOC120100576uncharacterized LOC1201005762121636924121653275Rat
1564291Fat4FAT atypical cadherin 42121928188122056711Rat
1582963LOC688944similar to eukaryotic translation initiation factor 4A, isoform 12122325531122326261Rat
1593207LOC365777similar to D-3-phosphoglycerate dehydrogenase (3-PGDH)2122368911122370490Rat
41284728LOC120101387U1 spliceosomal RNA2122696074122696229Rat
41143528LOC120101334small nucleolar RNA SNORA172122823020122823149Rat
2322140LOC100360416hypothetical LOC1003604162123256219123257818Rat
9245979LOC103695116serine/arginine-rich splicing factor 3 pseudogene2123371369123371904Rat
7573616LOC102550593uncharacterized LOC1025505932123397907123402098Rat
41325496LOC120100807uncharacterized LOC1201008072123403964123505271Rat
1309446Intuinturned planar cell polarity protein2123600972123685331Rat
2321897LOC100360560rCG41410-like2123685457123688592Rat
1596195Slc25a31solute carrier family 25 member 312123695387123711275Rat
1306528Hspa4lheat shock protein family A (Hsp70) member 4 like2123740384123793088Rat
1305390Plk4polo-like kinase 42123802512123820942Rat
1310132Mfsd8major facilitator superfamily domain containing 82123822042123882913Rat
41373813LOC120100808FUN14 domain-containing protein 2-like2123853238123855281Rat
1563987Abhd18abhydrolase domain containing 182123872299123920987Rat
1359533LOC365778similar to RIKEN cDNA 1700034I232123877836123880083Rat
1307509Larp1bLa ribonucleoprotein 1B2123936074123969254Rat
1565989RGD1565989similar to FLJ10378 protein2123969408124031645Rat
1308804Pgrmc2progesterone receptor membrane component 22124068257124084155Rat
11502478LOC108350245uncharacterized LOC1083502452124106720124122168Rat
41163150LOC120100809histone H3.v1-like2124209284124215591Rat
41397384LOC120100577uncharacterized LOC1201005772124222575124229453Rat
41242725LOC120100810uncharacterized LOC1201008102124384875124400228Rat
41105572LOC120101226small nucleolar RNA SNORD222124425037124425161Rat
7516893LOC102553773uncharacterized LOC1025537732124459201124469318Rat
1306920Jade1jade family PHD finger 12124543259124596361Rat
628721Sclt1sodium channel and clathrin linker 12124605445124763964Rat
1359508RGD1359508similar to protein C33A12.32124764263124830001Rat
41012974LOC12010057840S ribosomal protein S21-like2125345379125346298Rat
40974057LOC120100811uncharacterized LOC1201008112125776559125802118Rat
1563847RGD1563847similar to karyopherin (importin) alpha 22125884647125886767Rat
1559967RGD1559967similar to M2-type pyruvate kinase2126044233126045499Rat
2321697LOC100360660chromosome 13 open reading frame 1-like2126157686126158233Rat
6486316LOC100912576heterogeneous nuclear ribonucleoprotein F-like2126606819126618488Rat
1593483LOC689381similar to WD repeat domain 61 isoform a2127443608127444600Rat
2321502LOC100360756EWSR1/NFATC2 fusion protein-like2127988248127990520Rat
1592323LOC689439similar to myc induced nuclear antigen2128448551128451089Rat
41091330LOC120100812uncharacterized LOC1201008122128494120128525138Rat
7512608LOC102549579uncharacterized LOC1025495792128597382128617081Rat
1565811Pcdh10protocadherin 102128617212128683354Rat
2321898LOC100360559ras-related nuclear protein-like2128705723128707749Rat
1593206LOC365784similar to Fructose-bisphosphate aldolase A (Muscle-type aldolase)2128740774128742056Rat
1587345LOC310385similar to heat shock protein 82129109508129111050Rat
41068108LOC120101285small nucleolar RNA SNORA172129578379129578510Rat
1591091LOC689536similar to cyclin D binding myb-like transcription factor 12129668961129671126Rat
1559517Pabpc4lpoly(A) binding protein, cytoplasmic 4-like2129807755129809745Rat
9191676LOC103691547histone H3-like2129998520129998912Rat
41307398LOC120100579uncharacterized LOC1201005792130410255130411375Rat
41136118LOC120101396U1 spliceosomal RNA2130425871130426046Rat
41396004LOC120101335small nucleolar RNA SNORA172130664190130664323Rat
41206294LOC120101267small nucleolar RNA SNORA482130780074130780217Rat
7690977LOC102555656uncharacterized LOC1025556562130948096131285979Rat
1563562RGD1563562similar to GTPase activating protein testicular GAP12131029791131092039Rat
9251686LOC103691539uncharacterized LOC1036915392131121784131190097Rat
1595598LOC678817similar to GTPase activating protein testicular GAP12131215856131280563Rat
7516215LOC102555991uncharacterized LOC1025559912131292205131645662Rat
40963518LOC120100813Golgi apparatus membrane protein TVP23 homolog B-like2131442186131449289Rat
1589949LOC689629similar to GTPase activating protein testicular GAP12131691178131736078Rat
41164989LOC120101107U2 spliceosomal RNA2131736220131736350Rat
1564926LOC499607similar to GTPase activating protein testicular GAP12131750076131797706Rat
1589926LOC689652similar to prohibitin2131812324131822672Rat
11465045LOC10835024760S ribosomal protein L35 pseudogene2132271714132272066Rat
9101027LOC10369156360S ribosomal protein L31 pseudogene2132272163132272636Rat
1593205LOC365789similar to histone deacetylase 12132478743132480642Rat
1307595RGD1307595similar to RIKEN cDNA 1700018B242132570276132573582Rat
1593204LOC365790similar to heat shock protein 82133005896133007805Rat
2321698LOC100360659PARK2 co-regulated-like2133152880133154412Rat
7642297LOC102550446rho GTPase-activating protein 20-like2133296630133407312Rat
41233265LOC120100814rho GTPase-activating protein 20-like2133422096133454718Rat
1359174LOC365791similar to T-cell activation Rho GTPase-activating protein isoform b2133471326133509594Rat
40975337LOC120100815rho GTPase-activating protein 20-like2133520135133559812Rat
41092931LOC120093152rho GTPase-activating protein 20-like2133570229133603645Rat
1305870Pcdh18protocadherin 182133831996133845992Rat
2319549LOC100361725rCG57360-like2134161363134162203Rat
1587573LOC689807similar to ribosomal protein L18a2134326599134329443Rat
2319355LOC100361820putative ARM-1 protein-like2134333526134334743Rat
1309275Slc7a11solute carrier family 7 member 112134382002134517622Rat
41179476LOC120101127U4 spliceosomal RNA2134528655134528788Rat
40954669LOC120100816uncharacterized LOC1201008162134801684134810909Rat
40977691LOC120101306small nucleolar RNA SNORA172134854326134854445Rat
1587344Noctnocturnin2135271189135291407Rat
1310585Elf2E74 like ETS transcription factor 22135292291135385942Rat
11426711Trnap-ugg2transfer RNA proline (anticodon UGG) 22135401149135401220Rat
11486967Trnap-agg4transfer RNA proline (anticodon AGG) 42135402136135402207Rat
1586369Mgarpmitochondria-localized glutamic acid-rich protein2135431283135439425Rat
1586362Ndufc1NADH:ubiquinone oxidoreductase subunit C12135447067135450950Rat
1310984Naa15N(alpha)-acetyltransferase 15, NatA auxiliary subunit2135458018135520756Rat
1308353Rab33bRAB33B, member RAS oncogene family2135528116135538719Rat
11385321LOC10835000860S ribosomal protein L35a pseudogene2135531741135532151Rat
1586346Setd7SET domain containing 7, histone lysine methyltransferase2135562683135605468Rat
7541068LOC102551737cell wall protein PRY3-like2135569573135573180Rat
9437635LOC103691564uncharacterized LOC1036915642135604509135608407Rat
11392116LOC108350009uncharacterized LOC1083500092135662680135667922Rat
1311218Mgst2microsomal glutathione S-transferase 22135679524135715828Rat
1308177Maml3mastermind-like transcriptional coactivator 32135722585136136975Rat
1588275LOC679491hypothetical protein LOC6794912136283646136284398Rat
620283Foxo1forkhead box O12136312168136390603Rat
41193353LOC120100817cytochrome c oxidase assembly protein COX16 homolog, mitochondrial-like2136414089136417675Rat
7608249LOC102546847uncharacterized LOC1025468472136685343136695240Rat
11483277Trnak-cuu5transfer RNA lysine (anticodon CUU) 52136753070136753142Rat
7663391LOC102547111uncharacterized LOC1025471112136942896137033178Rat
41372747LOC120100818uncharacterized LOC1201008182137032199137034329Rat
1303283Cog6component of oligomeric golgi complex 62137062127137099176Rat
1560177Lhfpl6LHFPL tetraspan subfamily member 62137126485137324442Rat
41343568LOC120100819uncharacterized LOC1201008192137269261137286537Rat
11386619LOC10835018760S ribosomal protein L39 pseudogene2137421238137421432Rat
1565414Nhlrc3NHL repeat containing 32137527843137542258Rat
7631535LOC102549317H/ACA ribonucleoprotein complex subunit 2-like2137531853137534519Rat
1309403Proser1proline and serine rich 12137542378137561767Rat
1311090Stoml3stomatin like 32137572691137582402Rat
40999832LOC120101356small nucleolar RNA SNORA172137598603137598719Rat
1566012Frem2FRAS1 related extracellular matrix 22137602784137740785Rat
2318910LOC100362072hypothetical LOC1003620722137775820137776319Rat
1588592LOC294660similar to peroxiredoxin 12137826256137826912Rat
1304890Ufm1ubiquitin-fold modifier 12137969476137977620Rat
7623948LOC102549721uncharacterized LOC1025497212138182296138232451Rat
621276Trpc4transient receptor potential cation channel, subfamily C, member 42138307676138476856Rat
1305285Postnperiostin2138527714138559098Rat
1590821Dusp14l1dual specificity phosphatase 14-like 12138738130138739538Rat
1564472Rexo1l1-ps1REX1, RNA exonuclease 1 homolog-like 1, pseudogene 12138834049138838838Rat
40952217NEWGENE_40934091transfer RNA alanine (anticodon AGC)2138840829138840903Rat
40964986Trnaa-ggctransfer RNA alanine (anticodon GGC)2138866655138866735Rat
1307812Supt20hSPT20 homolog, SAGA complex component2138897316138930495Rat
1306169Exosc8exosome component 82138930405138937009Rat
1308900Alg5ALG5, dolichyl-phosphate beta-glucosyltransferase2138936998138951228Rat
71004Smad9SMAD family member 92138956326139006315Rat
40992880LOC120100820uncharacterized LOC1201008202138991377138999932Rat
1565351Rfxapregulatory factor X-associated protein2139008052139012235Rat
1597355Sertm1serine-rich and transmembrane domain containing 12139086905139106528Rat
1310639Ccna1cyclin A12139231738139278066Rat
41050852LOC120100821specifically androgen-regulated gene protein-like2139242890139244131Rat
1305900Spartspartin2139292630139319248Rat
1593170Ccdc169coiled-coil domain containing 1692139321644139351161Rat
1589577Sohlh2spermatogenesis and oogenesis specific basic helix-loop-helix 22139362246139384700Rat
41398125LOC120101148U6 spliceosomal RNA2139378366139378472Rat
68437Dclk1doublecortin-like kinase 12139417234139710956Rat
40947213LOC120100822uncharacterized LOC1201008222139451181139455877Rat
41088702LOC120100823uncharacterized LOC1201008232139556313139565405Rat
7581938LOC102552324uncharacterized LOC1025523242139569183139577314Rat
1562629Nbeaneurobeachin2139780021140338639Rat
7726710LOC102552834uncharacterized LOC1025528342139906425139915076Rat
1589984Mab21l1mab-21 like 12139943496139945885Rat
7664166LOC102552778uncharacterized LOC1025527782139990888139994618Rat
41237368LOC120101340small nucleolar RNA SNORA172140311336140311463Rat
41022771LOC120101343small nucleolar RNA SNORA172140617246140617361Rat
1560498Eif3i-ps1eukaryotic translation initiation factor 3, subunit I, pseudogene 12140669273140670304Rat
7507353LOC102547680ribosome biogenesis protein NSA2 homolog2140781011140781859Rat
41145339LOC120100824uncharacterized LOC1201008242140835560140873684Rat
1309652Tm4sf1transmembrane 4 L six family member 12141456950141466146Rat
1563943RGD1563943similar to mcdc21 protein2141550579141554296Rat
41329676LOC120101218U7 small nuclear RNA2141562874141562937Rat
621784Tm4sf4transmembrane 4 L six family member 42141570321141621263Rat
41338786LOC120100825uncharacterized LOC1201008252141606147141636054Rat
1559609Wwtr1WW domain containing transcription regulator 12141651159141766919Rat
6503572LOC10090943360S ribosomal protein L12-like2141784371141785085Rat
1588810Commd2COMM domain containing 22141848661141852907Rat
11368573LOC108350015uncharacterized LOC1083500152141852931141862943Rat
2320491Ankub1ankyrin repeat and ubiquitin domain containing 12141857623141894624Rat
1566235Rpl36a-ps1ribosomal protein L36a, pseudogene 12141892707141893102Rat
1594062Rnf13ring finger protein 132141927887142061801Rat
40964933NEWGENE_40926764transfer RNA proline (anticodon AGG)2142013652142013733Rat
9269847LOC10369511960S ribosomal protein L34 pseudogene2142026133142030412Rat
621826Pfn2profilin 22142067102142072938Rat
40936546LOC120100826uncharacterized LOC1201008262142100003142122325Rat
6500885LOC100909910non-POU domain-containing octamer-binding protein-like2142109424142112044Rat
41156453LOC120100828uncharacterized LOC1201008282142177984142189551Rat
41261916LOC120100829uncharacterized LOC1201008292142219161142229855Rat
6501036LOC100909949N-lysine methyltransferase SETD8-like2142289672142292195Rat
40946467LOC120100827uncharacterized LOC1201008272142355389142413239Rat
41392418LOC120101116U2 spliceosomal RNA2142505335142505414Rat
2320352LOC100361313rCG49992-like2142636554142636927Rat
1593169Tsc22d2TSC22 domain family, member 22142646778142697977Rat
620790Serp1stress-associated endoplasmic reticulum protein 12142757254142761243Rat
1589591Eif2aeukaryotic translation initiation factor 2A2142761303142794767Rat
1359128Selenotselenoprotein T2142804387142821438Rat
1559451Erich6glutamate-rich 62142851905142878010Rat
41264623LOC120100830uncharacterized LOC1201008302142885611142893347Rat
620778Siah2siah E3 ubiquitin protein ligase 22142913924142931752Rat
11362385Mindy4bMINDY family member 4B2143026685143061966Rat
628779Clrn1clarin 12143084030143130948Rat
11380114LOC10835001860S ribosomal protein L7a-like2143142439143143338Rat
1592212Med12lmediator complex subunit 12L2143253048143576507Rat
1585271Gpr171G protein-coupled receptor 1712143360187143366665Rat
41379557LOC120100831uncharacterized LOC1201008312143363352143370752Rat
70912P2ry14purinergic receptor P2Y142143372697143413213Rat
1307852Gpr87G protein-coupled receptor 872143439741143440901Rat
1302941P2ry13purinergic receptor P2Y132143470437143476360Rat
621681P2ry12purinergic receptor P2Y122143481468143523340Rat
735030Igsf10immunoglobulin superfamily, member 102143575710143605044Rat
1559622RGD1559622similar to hypothetical protein C130079G132143761288143800486Rat
9158000LOC103691561activated RNA polymerase II transcriptional coactivator p15 pseudogene2143786767143787385Rat
1561998RGD1561998similar to hypothetical protein C130079G132143883313143910452Rat
1560324RGD1560324similar to hypothetical protein C130079G132143936599143975506Rat
41146639LOC120093098arylacetamide deacetylase-like 22144000814144045928Rat
1560162RGD1560162similar to hypothetical protein C130079G132144077936144098546Rat
1563197Aadacl2arylacetamide deacetylase-like 22144123557144144159Rat
631440Aadacarylacetamide deacetylase2144163436144186086Rat
1303193Sucnr1succinate receptor 12144219066144230568Rat
7736144LOC102551458uncharacterized LOC1025514582144249483144259818Rat
41184903LOC120101169U6 spliceosomal RNA2144435226144435328Rat
41253353LOC120101014homeobox protein TGIF1-like2144497737144530432Rat
41216218LOC120100832uncharacterized LOC1201008322144589149144602088Rat
41024370LOC120101133U4 spliceosomal RNA2144593202144593324Rat
1592032LOC365803hypothetical LOC3658032144606370144613638Rat
628668Mbnl1muscleblind-like splicing regulator 12144639819144814395Rat
41272099LOC120100833protein FAM246C-like2144667224144670864Rat
41379567LOC120100580protein kinase C-binding protein 1-like2144832892144834587Rat
1590976LOC690857similar to mitochondrial transcription termination factor 12144912502144915405Rat
11487723LOC108350022uncharacterized LOC1083500222145011388145080528Rat
3242P2ry1purinergic receptor P2Y12145241975145248186Rat
2318158LOC100362430FUS interacting protein (serine-arginine rich) 1-like2145547075145547780Rat
620591Rap2bRAP2B, member of RAS oncogene family2145599714145600265Rat
41350546NEWGENE_40938314transfer RNA serine (anticodon AGA)2145791195145791276Rat
11451529LOC108350188heterogeneous nuclear ribonucleoprotein A1 pseudogene2146203311146204345Rat
1589858LOC690921similar to MAPKK-like protein kinase2146422640146423799Rat
6494152LOC10091119160 kDa heat shock protein, mitochondrial-like2146424660146426592Rat
41153850LOC120101261small nucleolar RNA SNORA482146703955146704098Rat
1562559Arhgef26Rho guanine nucleotide exchange factor 262146740336146850918Rat
1308767Dhx36DEAH-box helicase 362146856469146894577Rat
41162710LOC120100834uncharacterized LOC1201008342146895653146915619Rat
619890Gpr149G protein-coupled receptor 1492146909710146981924Rat
41368909LOC120101195U6 spliceosomal RNA2147238286147238388Rat
41144049LOC120101364small Cajal body-specific RNA 142147594521147594655Rat
1592031LOC365805similar to Eukaryotic translation initiation factor 5 (eIF-5)2147673787147675031Rat
40939051LOC120101244small nucleolar RNA SNORA282147675590147675715Rat
3098Mmemembrane metallo-endopeptidase2147686913147803808Rat
1560703RGD1560703similar to coated vesicle membrane protein2147826229147828568Rat
7663730LOC102546391uncharacterized LOC1025463912147935219147938083Rat
41219350LOC120101207U6 spliceosomal RNA2147941537147941643Rat
2323965LOC100362813tetratricopeptide repeat domain 112147963640147976641Rat
1561991Plch1phospholipase C, eta 12148148908148363616Rat
1565059RGD1565059similar to hypothetical protein E130311K132148376598148404343Rat
620653Slc33a1solute carrier family 33 member 12148415660148438182Rat
1310063Gmpsguanine monophosphate synthase2148441369148491908Rat
708515Vom2r44vomeronasal 2 receptor 442148497150148536036Rat
1306812Vom2r45vomeronasal 2 receptor, 452148570788148597475Rat
735122Vom2r46vomeronasal 2 receptor, 462148628275148667239Rat
41282001LOC120101015vomeronasal type-2 receptor 1-like2148709993148734340Rat
7675313LOC102549890spindlin-1-like2148724097148725193Rat
41300872LOC120100835vomeronasal type-2 receptor 1-like2148753589148785518Rat
41026717LOC120101016vomeronasal type-2 receptor 1-like2148844010148849771Rat
1588660LOC691033similar to GTPase activating protein testicular GAP12148873002148910171Rat
1626029LOC691049hypothetical protein LOC6910492148946711148947253Rat
1559813Vom2r47vomeronasal 2 receptor, 472148954547148990294Rat
41191904LOC120101227small nucleolar RNA SNORD222149003015149003143Rat
40966232LOC120101228small nucleolar RNA SNORD222149025675149025803Rat
41345252LOC120101314small nucleolar RNA SNORA172149074535149074665Rat
41361295LOC120101291small nucleolar RNA SNORA172149087742149087872Rat
1625999Vom2r-ps74vomeronasal 2 receptor, pseudogene 742149091322149092214Rat
61827Kcnab1potassium voltage-gated channel subfamily A regulatory beta subunit 12149137025149603540Rat
41050432LOC120101165U6 spliceosomal RNA2149399599149399701Rat
41042241LOC120100836uncharacterized LOC1201008362149550630149576041Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10904D2Mco332422147752777147753017Ratregion
33983D2Mit232642141596551141596857Ratregion
34005D2Mit81502143657411143657569Ratregion
34114D2Mgh151502141194931141195087Ratregion
34497D2Mgh241502135552383135552573Ratregion
33555D2Mit261322112844451112844585Ratregion
33674D2Mit171902106741551106741741Ratregion
33745D2Mit181932105378114105378297Ratregion
33765D2Mit352642127469220127469484Ratregion
35995D2Rat282712104814877104815148Ratregion
36201D2Rat331762113721113113721293Ratregion
37232D2Rat1832092139096736139096945Ratregion
37330D2Rat1812132148478176148478373Ratregion
37332D2Rat1041462109095976109096120Ratregion
37456D2Rat1471912133914684133914867Ratregion
35222D2Rat3021582122846256122846419Ratregion
37016D2Rat301642112103657112103813Ratregion
37034D2Rat371502145500022145500154Ratregion
37122D2Rat1172022132558903132559105Ratregion
37146D2Rat792002120958038120958240Ratregion
37682D2Rat1021002121121975121122075Ratregion
37768D2Rat1661462140636016140636154Ratregion
37952D2Rat1231552109366814109366971Ratregion
37990D2Rat1772002105378063105378253Ratregion
36466D2Rat341742136916935136917119Ratregion
36478D2Rat311522106573059106573211Ratregion
36578D2Rat782762115404101115404368Ratregion
36701D2Rat1461682144536601144536760Ratregion
36775D2Rat351622144228428144228589Ratregion
34807D2Rat291302105561590105561720Ratregion
34882D2Rat771722111263994111264166Ratregion
35066D2Rat801412122378211122378352Ratregion
35162D2Rat381942149559561149559726Ratregion
35857D2Rat361272143157029143157156Ratregion
39616D2Rat2562262140397825140398049Ratregion
39754D2Rat2232212148076403148076632Ratregion
39816D2Rat3001712117484680117484853Ratregion
39820D2Rat2552162123943856123944072Ratregion
39842D2Rat2241052147958279147958374Ratregion
38256D2Rat1152132130923272130923501Ratregion
38266D2Rat1362152117951309117951518Ratregion
38312D2Rat1791692149246195149246378Ratregion
38362D2Rat1611482114837527114837675Ratregion
38386D2Rat1582032121602339121602542Ratregion
40462D2Rat2801452111362447111362592Ratregion
40466D2Rat3031672127460743127460910Ratregion
38488D2Rat1602492110560547110560803Ratregion
38626D2Rat1711372112456140112456288Ratregion
40328D2Rat2571292142843294142843423Ratregion
38960D2Rat932052129164097129164302Ratregion
38962D2Rat961492114587899114588046Ratregion
39090D2Rat1802282117776691117776935Ratregion
39164D2Rat1592002121850141121850343Ratregion
39242D2Rat982152126966230126966445Ratregion
42289D2Rat3731202140171409140171528Ratregion
41152D2Rat2201382137154180137154326Ratregion
41184D2Rat2191762132082925132083097Ratregion
41300D2Rat2211672140689412140689571Ratregion
41358D2Rat2171602118111229118111368Ratregion
41484D2Rat2181262120346103120346217Ratregion
42590D2Rat3352422109002666109002905Ratregion
42593D2Rat3371432114141640114141782Ratregion
42594D2Rat3382172114615241114615477Ratregion
42598D2Rat3872412137784120137784356Ratregion
40780D2Rat2222382140253741140253961Ratregion
41128D2Rat2252432145196438145196688Ratregion
41670D2Rat3012052122603934122604139Ratregion
41834D2Rat3742002149406644149406843Ratregion
41838D2Rat3722442121181567121181814Ratregion
44590D9Got441612104935118104935281Ratregion
43524D3Got1152022120490082120490284Ratregion
43525D2Got671782115536109115536287Ratregion
43526D2Got741402122116180122116320Ratregion
43530D2Got811432125071448125071591Ratregion
43531D2Got892072131503149131503351Ratregion
43533D2Got1882262148083125148083256Ratregion
43533D2Got1882262148083030148083891Ratregion
43533D2Got1882262148083030148083256Ratregion
43535D2Got1072772149380288149380565Ratregion
43536D2Got1062322148114971148115203Ratregion
43540D2Got971602137331233137331393Ratregion
43541D2Got1042222137514111137514333Ratregion
43543D2Got991792136468714136468893Ratregion
60796D2Wox61822112166180112166356Ratregion
60798D2Wox91462136445150136445286Ratregion
60326D2Got491862105215501105215689Ratregion
60327D2Got502242106426481106426705Ratregion
60335D2Got622332112291717112291950Ratregion
60337D2Got662442112187566112187814Ratregion
60338D2Got692512111809778111810029Ratregion
60339D2Got751482118768579118768724Ratregion
60340D2Got761992121862427121862626Ratregion
60341D2Got771772119519366119519543Ratregion
60342D2Got782672119686278119686545Ratregion
60343D2Got792622109776051109776313Ratregion
60346D2Got821602121165735121165895Ratregion
60347D2Got831942122263863122264057Ratregion
60348D2Got841222129127491129127613Ratregion
60349D2Got852852128982454128982739Ratregion
60352D2Got881452148176358148176503Ratregion
60353D2Got902022130930745130930947Ratregion
60354D2Got921552133234754133234909Ratregion
60355D2Got932442135818873135819116Ratregion
60356D2Got942752134628859134629134Ratregion
60357D2Got951912134388649134388840Ratregion
60359D2Got982972136549981136550275Ratregion
60278D2Got1011062138863999138864105Ratregion
60279D2Got1021522138038724138038876Ratregion
60280D2Got1031152139323630139323745Ratregion
60312D2Got1841362107565811107565947Ratregion
60313D2Got1871162111190665111190781Ratregion
62511D2Uia92192135944736135944955Ratregion
66367D2Mco381882145496743145496934Ratregion
66480D2Uia151322140734737140734869Ratregion
66648D2Mco102302133886747133886992Ratregion
66650D2Mco111202116140115116140240Ratregion
66731D2Mco362402107641164107641424Ratregion
67258D2Arb93102142709254142709417Ratregion
67258D2Arb93102142709148142709642Ratregion
67258D2Arb93102142709148142709417Ratregion
67751D2Uwm321992142909618142909825Ratregion
67780D2Uwm81742114699203114699377Ratregion
67785D2Uwm91572135790985135791136Ratregion
67803D2Uwm201382123231171123231297Ratregion
1358000D2Chm1132482140708701140708949Ratregion
1358019D2Chm1221972139401804139402001Ratregion
1358020D2Chm462042146785831146786035Ratregion
1358030D2Chm332092137219876137220085Ratregion
1358049D2Chm512272146368688146368915Ratregion
1358052D2Chm902422142323368142323610Ratregion
1630140D2Ulb102111388724111389025Ratregion
1630697D2Got3292032120671230120671431Ratregion
1630943D2Got4082772111144022111144299Ratregion
1631852D2Got383942135832101135832195Ratregion
1632110D2Mco471812136963316136963497Ratregion
1629982D2Got3981412111545367111545506Ratregion
1640910D2Got4331822135659785135659967Ratregion
1640916D2Got4361412124102336124102477Ratregion
1640946D2Got3311482140790294140790442Ratregion
1641164D2Got4351792126347435126347612Ratregion
1639722D2Got4322872138555474138555761Ratregion
1633103D2Got3301382122601409122601547Ratregion
1640396D2Got4231512123258917123259068Ratregion
1640406D2Got4171392123340252123340389Ratregion
1636528D2Got3321312144619698144619827Ratregion
1636630D2Wox571572115111296115111453Ratregion
1636863D2Got3281772112776089112776268Ratregion
1637487D2Got1052952147549114147549404Ratregion
1634240D2Got3731852110039882110040069Ratregion
1634455D2Got4001482114421482114421630Ratregion
1634762D2Got3271952104661421104661616Ratregion
7206720D3Mit271852113202571113202656Ratregion
7205972Trpc41092138476205138476314Ratregion
7192218Sox23302117538902117539232Ratregion
7193078AA8921501022148362163148362265Ratregion
7193089D2Mgh271392142709158142709642Ratregion
7193089D2Mgh271392142709158142709297Ratregion
7193097BI2810071812137324111137324292Ratregion
7193060Sox21312117537801117537932Ratregion
7205884UniSTS:2570812592115218994115219253Ratregion
7205884UniSTS:2570812592115218994115219253Ratregion
7206792RH1243264492148724497148724942Ratregion
7206792RH1243264492104592140104592589Ratregion
5035957PMC317048P17492119429240119429989Ratregion
5035979PMC34459P16522145242883145243535Ratregion
5038960RH1274321912115359236115359426Ratregion
5036217UniSTS:1423991432113402338113402481Ratregion
5036219D3Nds641372119595428119595565Ratregion
5036366UniSTS:143556702120009437120009507Ratregion
5036510Stk181912123808409123808600Ratregion
5036573AU0484731632114191426114191466Ratregion
5036757AU0491061562110252246110252402Ratregion
5036991AU0498451642135049733135049897Ratregion
5035651U859362362133886688133887009Ratregion
5035697D6S15606032124366502124367105Ratregion
5031272PMC123072P22512145242893145243144Ratregion
5033853RH1403631792123622939123623118Ratregion
5028771RH1422681632135714946135715702Ratregion
5028845RH1425491122112816146112816258Ratregion
5031618AU0477181792140646980140647159Ratregion
5034193RH1417191802137155101137155281Ratregion
5026394RH1320371932138550436138550629Ratregion
5028963RH1429911162140779374140779490Ratregion
5029011RH1431771112138991502138991613Ratregion
5031754AU0472622392149249836149250066Ratregion
5034422BE1177721592109996795109996954Ratregion
5034606BI2810071592137324112137324271Ratregion
5026728RH1333092022137970683137970885Ratregion
5032105RH944181702120291028120291198Ratregion
5034814AA9429791792121466298121466477Ratregion
5032349AI4514111222111580792111580914Ratregion
5032351AI4505441212138918413138918534Ratregion
5026930RH1340802002143594767143594959Ratregion
5026982RH1342751852135538305135538491Ratregion
5032523T034091952139780052139780247Ratregion
5035466AW5320872112118724204118724415Ratregion
5027127U859332192107641164107641454Ratregion
5027145D1S28315512115113244115113795Ratregion
5027243AI7470961472138558701138558848Ratregion
5027245AI7887411312148415710148415841Ratregion
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5087107AI0079551602112377692112377852Ratregion
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5087486PMC207566P28542119432560119433414Ratregion
5087492PMC207566P51692119433543119433712Ratregion
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5087506PMC212738P14932119427975119428468Ratregion
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5089153AU0489861072120519423120519456Ratregion
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5090599AU0498481972109981513109981710Ratregion
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5090005AU0494931772134901075134901252Ratregion
5084292AA8501001662119426641119426811Ratregion
5082023BF4156731592140310302140310461Ratregion
5087983UniSTS:14372202125886718125886898Ratregion
5082339BI2745702052116935372116936240Ratregion
5085507BE1009161882115687237115687425Ratregion
5090667AU049889492117492453117492568Ratregion
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5083347AA818143942110227073110227167Ratregion
5081595BF420674982123516248123516346Ratregion
5081617BE1176411552145247400145247555Ratregion
5085189AW5340152162124594225124594440Ratregion
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5083913AI4066271462112322077112322223Ratregion
5502645RH1263012042120310928120311132Ratregion
5502671Dusp141932138739069138739262Ratregion
5502957Trpc47662138475745138476511Ratregion
5503794UniSTS:4711044122117537666117538078Ratregion
5504008px-1e51052121380222121380327Ratregion
5504552PMC304100P21222117537871117537993Ratregion
5504650PMC32249P15452135290763135291308Ratregion
5504859ha253102136958572136959506Ratregion
5504873ha28479132131027273131028228Ratregion
5506825G462762712114611009114611280Ratregion
5507033fl05f09.x12002145599793145599993Ratregion
5507163UniSTS:2249502122124315280124315492Ratregion
5506993fi13b11.x102109326614109327694Ratregion
5499499stSG6024345052122214219122214724Ratregion
5499783UniSTS:2346592212118763445118763666Ratregion
5499785UniSTS:2346882702141649159141649429Ratregion
5499787UniSTS:2346791302138533942138534072Ratregion
5499497stSG60227711102139303554139304664Ratregion
5502561RH1253401832142820626142820809Ratregion
5500517RH1358401022141851396141851987Ratregion
5501109PMC138456P21182119432458119432576Ratregion
5501361D3S1232892117527557117527646Ratregion
5504752PMC86923P17522139237347139238099Ratregion
5501638UNH10876152125612043125612657Ratregion
5501836MARC_15315-15316:1013436374:14612135517549135518010Ratregion
5501918MARC_17479-17480:1016465460:11222112590043112591201Ratregion
5506060UniSTS:4982663142123791880123792194Ratregion
5506591KIAA11091112119912322119912433Ratregion
550223724.MMHAP12FLH3.seq1882118753830118754018Ratregion
5502705Tenr02119949582119950628Ratregion
Position Markers

Flank 1: (D2Rat205)
Rat AssemblyChrPosition (strand)Source
SHRSP x BN Map229.7798UniSTS
SHRSP x BN Map229.7798RGD
Peak: (D2Rat205)
Rat AssemblyChrPosition (strand)Source
SHRSP x BN Map229.7798UniSTS
SHRSP x BN Map229.7798RGD
Flank 2: (D2Rat38)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22149,559,561 - 149,559,726 (+)MAPPER
Rnor_6.02155,965,557 - 155,965,721NCBI
Rnor_5.02175,354,307 - 175,354,471UniSTS
RGSC_v3.42155,102,058 - 155,102,222UniSTS
RGSC_v3.42155,101,972 - 155,102,371RGD
RGSC_v3.12155,052,021 - 155,052,185RGD
Celera2143,979,588 - 143,979,752UniSTS
RH 3.4 Map2972.8RGD
RH 3.4 Map2972.8UniSTS
RH 2.0 Map2698.5RGD
SHRSP x BN Map260.5198RGD
FHH x ACI Map267.7299RGD
Cytogenetic Map2q31UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1302794Stl27Serum triglyceride level QTL 274.40.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)225413423143657569Rat
1358894Kidm24Kidney mass QTL 244.03kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358899Kidm23Kidney mass QTL 233.88kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358901Cm38Cardiac mass QTL 382heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423157142209Rat
1358904Cm39Cardiac mass QTL 392.26heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423157142209Rat
1358910Kidm27Kidney mass QTL 275.77kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358911Kidm28Kidney mass QTL 285.42kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358913Cm41Cardiac mass QTL 412.73heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat
1358917Cm42Cardiac mass QTL 422.82heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat
1358887Bw50Body weight QTL 502.39body mass (VT:0001259)body weight (CMO:0000012)225413652157142078Rat
1358908Bw49Body weight QTL 493.36body mass (VT:0001259)body weight (CMO:0000012)225413652157142078Rat
1354603Bp243Blood pressure QTL 2433.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)226917817127469484Rat
2290453Scl55Serum cholesterol level QTL 552.83blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)226917817136917119Rat
2293835Kiddil5Kidney dilation QTL 53.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242804607157142209Rat
2293843Kiddil6Kidney dilation QTL 63.1kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242804607182042367Rat
1298074Bp164Blood pressure QTL 1640.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
1298085Bp165Blood pressure QTL 1650.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)243154682202446871Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)243154682202446871Rat
2293676Bmd19Bone mineral density QTL 1910.70.0001femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)243162366111362592Rat
2293682Bmd24Bone mineral density QTL 248.90.0001femur mineral mass (VT:0010011)cortical volumetric bone mineral density (CMO:0001730)243162366111362592Rat
2293671Bss44Bone structure and strength QTL 4410.970.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)243162366148478373Rat
1354601Slep1Serum leptin concentration QTL 15.39blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)243171017184114403Rat
631266Bp132Blood pressure QTL 1320.0005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)246123260202447032Rat
1331760Bp206Blood pressure QTL 2063.62454arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)256043031202447032Rat
1558648Smcn1Smooth muscle cell number QTL 10.039blood vessel smooth muscle cell quantity (VT:0010525)aorta smooth muscle cell count per unit vessel length (CMO:0001646)259134147127460910Rat
61438Cia7Collagen induced arthritis QTL 74.60.0001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)259324377141596857Rat
1578777Stresp15Stress response QTL 1520.05blood aldosterone amount (VT:0005346)plasma aldosterone level (CMO:0000551)259846005104846005Rat
2306903Bp336Blood pressure QTL 3360.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)264366971109366971Rat
1298080Bp163Blood pressure QTL 1630.02arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266118275202447032Rat
1354648Bp239Blood pressure QTL 2390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266118463226797303Rat
7411551Bw131Body weight QTL 13129.60.001body mass (VT:0001259)body weight gain (CMO:0000420)267942638112942638Rat
1558653Prcr1Prostate cancer resistance QTL 15prostate integrity trait (VT:0010571)area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)272532993157142209Rat
1354605Rf48Renal function QTL 482.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)274786664206665859Rat
631198Cm22Cardiac mass QTL 224.30.0008heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)276539322150540526Rat
61374Edpm2Estrogen-dependent pituitary mass QTL 24.420.86pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)276539322202447032Rat
2299162Iddm32Insulin dependent diabetes mellitus QTL 322.36blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)278665616143657569Rat
1581569Uae32Urinary albumin excretion QTL 320.0001urine protein amount (VT:0005160)urine albumin excretion rate (CMO:0000757)278665619219826953Rat
724534Uae6Urinary albumin excretion QTL 610urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)278665619249053267Rat
61392Bp6Blood pressure QTL 67arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)280270434125270434Rat
1598865Bp296Blood pressure QTL 2962.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)281018907126018907Rat
8662832Vetf7Vascular elastic tissue fragility QTL 73.5aorta elastin amount (VT:0003905)aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)281689826221035911Rat
1354622Kidm16Kidney mass QTL 163kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)281754530222436696Rat
1354649Kidm17Kidney mass QTL 172.9kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)281754530227146641Rat
1578772Stresp14Stress response QTL 1450.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)282345893130923501Rat
7207808Bmd89Bone mineral density QTL 894.1femur strength trait (VT:0010010)femoral neck ultimate force (CMO:0001703)288862519133862519Rat
2300165Bmd49Bone mineral density QTL 494.80.0001lumbar vertebra mineral mass (VT:0010511)bone mineral density (CMO:0001226)288862519133862519Rat
2300170Bmd45Bone mineral density QTL 4512.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)288862519133862519Rat
2300185Bmd46Bone mineral density QTL 468.40.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)288862519133862519Rat
1598862Glom9Glomerulus QTL 93.5kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)292337601137337601Rat
1598863Cm65Cardiac mass QTL 652.3heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)292337601137337601Rat
631566Bp90Blood pressure QTL 900.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2102803808147803808Rat
8662836Vetf8Vascular elastic tissue fragility QTL 80.66thoracic aorta molecular composition trait (VT:0010568)aorta wall extracellular elastin dry weight to aorta wall extracellular collagen weight ratio (CMO:0002003)2104559726149559726Rat
1581552Pur12Proteinuria QTL 125.190.0009total urine protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)2112103657148076632Rat
631507Bp105Blood pressure QTL 1050.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2112456140212696837Rat
634308Sach6Saccharin preference QTL 64.9taste sensitivity trait (VT:0001986)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)2112456140212696837Rat
1354594Despr10Despair related QTL 100.00000249locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)2114654253159654253Rat
1359035Bp276Blood pressure QTL 276arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)2114837527143657569Rat
1359035Bp276Blood pressure QTL 276arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2114837527143657569Rat
1359030Bp277Blood pressure QTL 277arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)2114837527185876470Rat
1359030Bp277Blood pressure QTL 277arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2114837527185876470Rat
1578648Bss11Bone structure and strength QTL 114.7femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)2114837527211674221Rat
1554319Bmd2Bone mineral density QTL 213.40.0001lumbar vertebra area (VT:0010570)lumbar vertebra cross-sectional area (CMO:0001689)2114837675212549332Rat
5135226Leukc2Leukocyte quantity QTL 2eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)2118111229149559726Rat
1582257Gluco21Glucose level QTL 213.10.0035blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)2118111229157142209Rat
738007Anxrr7Anxiety related response QTL 74.4exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)2118189491163189491Rat
1581578Cm49Cardiac mass QTL 494.90.01heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)2127447387143657569Rat
1358360Sradr2Stress Responsive Adrenal Weight QTL 210.24adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)2129164097152195315Rat
6907363Bp357Blood pressure QTL 3574.10.002arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)2129540907174540907Rat
1300165Rf9Renal function QTL 93.28kidney glomerulus integrity trait (VT:0010546)index of glomerular damage (CMO:0001135)2133914684202447032Rat
70175BpQTLCluster3Blood pressure QTL cluster 34.128arterial blood pressure trait (VT:2000000)absolute change in systolic blood pressure (CMO:0000607)2135552573202446871Rat
70175BpQTLCluster3Blood pressure QTL cluster 34.128arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)2135552573202446871Rat
70175BpQTLCluster3Blood pressure QTL cluster 34.128arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2135552573202446871Rat
70175BpQTLCluster3Blood pressure QTL cluster 34.128arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2135552573202446871Rat
70175BpQTLCluster3Blood pressure QTL cluster 34.128arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)2135552573202446871Rat
1298076Bp166Blood pressure QTL 1660.0009arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2136445150202447032Rat
1581502Esta3Estrogen-induced thymic atrophy QTL 3thymus mass (VT:0004954)thymus wet weight (CMO:0000855)2136916935189599348Rat
1359022Ppulsi1Prepulse inhibition QTL 13.63prepulse inhibition trait (VT:0003088)acoustic startle response measurement (CMO:0001519)2136916935213594495Rat
12879830Bw178Body weight QTL 1780.001body mass (VT:0001259)body weight (CMO:0000012)2137219876142323610Rat
12879831Cm82Cardiac mass QTL 820.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)2137219876142323610Rat
12879832Cm83Cardiac mass QTL 830.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)2137219876142323610Rat
12879833Cm84Cardiac mass QTL 840.001heart right ventricle mass (VT:0007033)heart weight to body weight ratio (CMO:0000074)2137219876142323610Rat
12879834Am1Aortic mass QTL 10.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)2137219876142323610Rat
12879835Kidm60Kidney mass QTL 600.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)2137219876142323610Rat
1549841Bp256Blood pressure QTL 2560.03arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2137219876142323610Rat
7488931Bp367Blood pressure QTL 3670.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2139401804142323610Rat
1331794Bp202Blood pressure QTL 2023.66819arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2141194931223265385Rat
1331805Cm29Cardiac mass QTL 293.50746heart mass (VT:0007028)heart wet weight (CMO:0000069)2141194931223265385Rat
71113Cari2Carrageenan-induced inflammation QTL 22.70.009hypodermis integrity trait (VT:0010550)inflammatory exudate volume (CMO:0001429)2141596551202447032Rat
12879841Cm87Cardiac mass QTL 870.026heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)2142323368146786035Rat
12879842Cm88Cardiac mass QTL 880.042heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)2142323368146786035Rat
12879843Am3Aortic mass QTL 30.016aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)2142323368146786035Rat
12879844Kidm62Kidney mass QTL 620.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)2142323368146786035Rat
7488933Bp368Blood pressure QTL 3680.004arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2142323368147803808Rat
1549828Bp258Blood pressure QTL 2580.03arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2142323368150650069Rat
724568Uae13Urinary albumin excretion QTL 134.4urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)2143157029210020885Rat
10043136Iddm54Insulin dependent diabetes mellitus QTL 543.40.0001blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)2143657411190602963Rat
10043136Iddm54Insulin dependent diabetes mellitus QTL 543.40.0001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)2143657411190602963Rat
6903312Bw112Body weight QTL 1123.20.0013body mass (VT:0001259)body weight (CMO:0000012)2143657569184114274Rat
61401Niddm2Non-insulin dependent diabetes mellitus QTL 24.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)2144599348189599348Rat
631520Bp73Blood pressure QTL 730.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2147686913168355276Rat
1598833Bp295Blood pressure QTL 2953.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2147798556192798556Rat
1641925Alcrsp2Alcohol response QTL 2response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)2149559561221167075Rat
1641891Alcrsp17Alcohol response QTL 17response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)2149559561249053267Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general number of animals used: 41 F1 (20 males and 21 females) and 209 backcross (104 males and 105 females) 8662443
qtl_general software used: Mapmaker; parametric analysis 8662443
qtl_general LOD=0.24 for females and 4.3 for males 8662443
qtl_general measurement method: at 18 wks of age, animals were anesthetized with pentobarbital sodium, heart was removed and a catheter inserted into the aorta for perfusion, after 15 min of perfusion the thoracic aorta was dissected, and elastin/collagen content recorded 8662443