D2Rat373 Marker Search Result - Rat Genome Database

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Marker: D2Rat373

Symbol: D2Rat373
Previously known as: oxsts10633; R0321-A02; 
RGD ID: 42289
Expected Size: 119 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr82142,321,519 - 142,321,638 (+)Marker Load Pipeline
mRatBN7.22140,171,409 - 140,171,528 (+)MAPPERmRatBN7.2
Rnor_6.02145,431,818 - 145,431,936NCBIRnor6.0
Rnor_5.02164,844,071 - 164,844,189UniSTSRnor5.0
RGSC_v3.42145,236,092 - 145,236,211RGDRGSC3.4
RGSC_v3.42145,236,093 - 145,236,211UniSTSRGSC3.4
RGSC_v3.12145,185,892 - 145,186,204RGD
Celera2134,650,346 - 134,650,464UniSTS
FHH x ACI Map263.3399UniSTS
FHH x ACI Map263.3399RGD
Cytogenetic Map2q26UniSTS
Is Marker For: Genes:   Nbea  




#
Reference Title
Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. Rat Genetic Map Data Rat Genetic Map Data, Whitehead Institute for Biomedical Research/MIT Center for Genome Research Website, http://waldo.wi.mit.edu/rat/public/distribution/rat_sslp_releases/jan00/
3. Electronic Transfer of SSLP Data Rat Genetic Mapping Project, Whitehead Institute for Biomedical Research. APR. 2001.
4. UniSTS Pipeline RGD automated pipelines


 
Forward Primer TTTCTTTTGGAGCCTGATGG
Reverse Primer CCTAGTGACAGATTCAGAGGGTG
 
Template 
TGGGCCATNTTTGTTACCTTCAGTATTAGGATTTTCTTTTGGAGCCTGATGGAGTCACAGTGGT
AGGGCATAACTGATGGCAGTGACACACACACACACACACACACACACACACACCGNACACACAC
ACACCCTCTGAATCTGTCACTAGGTATCTTAGTTTATTTTGTTTCTGTTTTCTGCTTCTGTTCC
ATGACTAAGGCAACTTATAGAAGAAAGTTTATTGGGGGCTTACAGTTTCAGATAGTAAGTCCAT
GGTCATCATGGTGTCCCATGACATCAGGCAGGAAGGTGGGCATAGTGCTGGACCAGTAGGGTAC
CGAGCTCGAATTCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAAT
TCCACACAACATACGAG


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1562629Nbeaneurobeachin2139780021140338639Rat
GenBank Nucleotide CH474003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 66 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1578648Bss11Bone structure and strength QTL 114.7femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)2114837527211674221Rat
2293671Bss44Bone structure and strength QTL 4410.970.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)243162366148478373Rat
1549841Bp256Blood pressure QTL 2560.03arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2137219876142323610Rat
631566Bp90Blood pressure QTL 900.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2102803808147803808Rat
1298074Bp164Blood pressure QTL 1640.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
6907363Bp357Blood pressure QTL 3574.10.002arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)2129540907174540907Rat
1354648Bp239Blood pressure QTL 2390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266118463226797303Rat
1358360Sradr2Stress Responsive Adrenal Weight QTL 210.24adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)2129164097152195315Rat
1354649Kidm17Kidney mass QTL 172.9kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)281754530227146641Rat
10755499Bp389Blood pressure QTL 3892.61arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)218960362228801039Rat

1 to 10 of 66 rows


Database
Acc Id
Source(s)
NCBI Gene 361948 UniSTS