Gene: Jade1 (jade family PHD finger 1) Rattus norvegicus
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Symbol: Jade1
Name: jade family PHD finger 1
Description: ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN histone H3 acetylation (ortholog); histone H4-K12 acetylation (ortholog); histone H4-K5 acetylation (ortholog); FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); cytosol (ortholog); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2-methoxyethanol
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC310352; PHD finger protein 17; Phf17; protein Jade-1
Orthologs:
Homo sapiens (human) : JADE1 (jade family PHD finger 1)  HGNC  Alliance
Mus musculus (house mouse) : Jade1 (jade family PHD finger 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Jade1 (jade family PHD finger 1)
Pan paniscus (bonobo/pygmy chimpanzee) : JADE1 (jade family PHD finger 1)
Canis lupus familiaris (dog) : JADE1 (jade family PHD finger 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Jade1 (jade family PHD finger 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02128,461,147 - 128,514,298 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02148,061,324 - 148,114,469 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42128,499,983 - 128,553,050 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12128,444,210 - 128,502,196 (+)NCBI
Celera2119,445,989 - 119,498,978 (+)NCBICelera
Cytogenetic Map2q25NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Jade1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1306920
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2018-10-09
Status: ACTIVE