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Gene: Tm4sf1 (transmembrane 4 L six family member 1) Rattus norvegicus
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Symbol: Tm4sf1
Name: transmembrane 4 L six family member 1
Description: Predicted to be involved in blastocyst formation. Predicted to localize to the integral component of plasma membrane. Orthologous to human TM4SF1 (transmembrane 4 L six family member 1); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 3-chloropropane-1,2-diol; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC295061; transmembrane 4 L6 family member 1; transmembrane 4 superfamily member 1
Orthologs:
Homo sapiens (human) : TM4SF1 (transmembrane 4 L six family member 1)  HGNC  Alliance
Mus musculus (house mouse) : Tm4sf1 (transmembrane 4 superfamily member 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tm4sf1 (transmembrane 4 L six family member 1)
Pan paniscus (bonobo/pygmy chimpanzee) : TM4SF1 (transmembrane 4 L six family member 1)
Canis lupus familiaris (dog) : TM4SF1 (transmembrane 4 L six family member 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tm4sf1 (transmembrane 4 L six family member 1)
Sus scrofa (pig) : TM4SF1 (transmembrane 4 L six family member 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02147,382,866 - 147,392,062 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02166,792,815 - 166,802,011 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42146,521,188 - 146,530,382 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12146,471,764 - 146,480,098 (-)NCBI
Celera2135,910,307 - 135,919,488 (-)NCBICelera
Cytogenetic Map2q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tm4sf1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309652
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.