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Gene: Lhfpl6 (LHFPL tetraspan subfamily member 6) Rattus norvegicus
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Symbol: Lhfpl6
Name: LHFPL tetraspan subfamily member 6
Description: Predicted to localize to the integral component of membrane. Orthologous to human LHFPL6 (LHFPL tetraspan subfamily member 6); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Lhfp; lipoma HMGIC fusion partner; MGC109397; RGD1560177; similar to RIKEN cDNA 2810489O06
Orthologs:
Homo sapiens (human) : LHFPL6 (LHFPL tetraspan subfamily member 6)  HGNC  Alliance
Mus musculus (house mouse) : Lhfp (lipoma HMGIC fusion partner)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Lhfpl6 (LHFPL tetraspan subfamily member 6)
Pan paniscus (bonobo/pygmy chimpanzee) : LHFPL6 (LHFPL tetraspan subfamily member 6)
Canis lupus familiaris (dog) : LHFPL6 (LHFPL tetraspan subfamily member 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Lhfpl6 (LHFPL tetraspan subfamily member 6)
Sus scrofa (pig) : LHFPL6 (LHFPL tetraspan subfamily member 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02142,262,236 - 142,461,980 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02161,947,947 - 162,146,115 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42141,974,792 - 142,183,203 (+)NCBIRGSC3.4rn4RGSC3.4
Celera2131,623,723 - 131,820,297 (+)NCBICelera
Cytogenetic Map2q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Lhfpl6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1560177
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.