Bp334 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Bp334 (Blood pressure QTL 334) Rattus norvegicus

Symbol: Bp334
Name: Blood pressure QTL 334
RGD ID: 2303178
Previously known as: S x SHR QTL Region 2; BP QTL 2
Trait: arterial blood pressure trait   (VT:2000000)    
Measurement Type: diastolic blood pressure   (CMO:0000005)    
mean arterial blood pressure   (CMO:0000009)    
systolic blood pressure   (CMO:0000004)    
LOD Score: 3.7
P Value: 0.01
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2979,271,511 - 91,616,855RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0983,686,153 - 98,164,303RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0983,451,810 - 97,845,437RGDRnor5.0
RGSC_v3.4977,170,797 - 90,249,887RGDRGSC3.4
Cross Type: intercross
Strains Crossed: SS.SHR-(D9Rat7-D9Mco93)/Mco 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Vertebrate Trait

Rat Strain

References

References - curated
# Reference Title Reference Citation
1. Refined mapping of blood pressure quantitative trait loci using congenic strains developed from two genetically hypertensive rat models. Kumarasamy S, etal., Hypertens Res. 2011 Dec;34(12):1263-70. doi: 10.1038/hr.2011.116. Epub 2011 Aug 4.
2. Blood pressure and proteinuria effects of multiple quantitative trait loci on rat chromosome 9 that differentiate the spontaneously hypertensive rat from the Dahl salt-sensitive rat. Toland EJ, etal., J Hypertens. 2008 Nov;26(11):2134-41.
Related QTLs

Related QTL Description Reference
Bp108 interacts with RGD:2302803
Bp34 interacts with RGD:2302803
Pur31 sub_region RGD:6903249


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
41022835LOC120094905U1 spliceosomal RNA97935164579351807Rat
40973822LOC120094851uncharacterized LOC12009485197937539879380326Rat
9346176LOC103690559uncharacterized LOC10369055997939681379426093Rat
620431Pax3paired box 397956745579664042Rat
11455030LOC108351956RING finger protein 223-like97968147879684988Rat
40952464LOC120094975U6 spliceosomal RNA97975781579757917Rat
1565739Sgpp2sphingosine-1-phosphate phosphatase 297976265879884665Rat
1303210Farsbphenylalanyl-tRNA synthetase subunit beta97988785279947082Rat
1311644Mogat1monoacylglycerol O-acyltransferase 197998096379988513Rat
70552Acsl3acyl-CoA synthetase long-chain family member 398011516480164636Rat
7514331LOC102551819U3 small nucleolar RNA-associated protein 14 homolog B-like98012062280129166Rat
1302957Kcne4potassium voltage-gated channel subfamily E regulatory subunit 498024342980251533Rat
41018431Trnat-agu20transfer RNA threonine (anticodon AGU) 2098033471680334790Rat
619975Hdac1lhistone deacetylase 1-like98045261580454615Rat
41241510LOC120094717uncharacterized LOC12009471798064940180677567Rat
3626Scg2secretogranin II98080307480808646Rat
6499336Eef1a1-ps8eukaryotic translation elongation factor 1 alpha 1, pseudogene 898086618480867575Rat
40949615LOC120094936small nucleolar RNA SNORA1798087056180870674Rat
1566037Rpsa-ps11ribosomal protein SA, pseudogene 1198091006880912886Rat
1311772Ap1s3adaptor related protein complex 1 subunit sigma 398095040281009889Rat
1305996Wdfy1WD repeat and FYVE domain containing 198103485281092823Rat
1309556Mrpl44mitochondrial ribosomal protein L4498110665881111709Rat
11406805LOC10835203040S ribosomal protein S2 pseudogene98111517781116076Rat
3748Serpine2serpin family E member 298112474681188866Rat
1589866Fam124bfamily with sequence similarity 124 member B98151301881533621Rat
1308190Cul3cullin 398159264181670428Rat
1561963Dock10dedicator of cytokinesis 1098184359982101540Rat
1306139Rnf11l2ring finger protein 11-like 298218177982183568Rat
9171458Nyap2neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 298240679782658250Rat
41266326LOC120094719uncharacterized LOC12009471998316197583182540Rat
11449647LOC108352031glyceraldehyde-3-phosphate dehydrogenase pseudogene98336527983366295Rat
7570114LOC102553709uncharacterized LOC10255370998344640383484732Rat
2922Irs1insulin receptor substrate 198355296483605797Rat
1306477Rhbdd1rhomboid domain containing 198363003783748690Rat
41300199LOC120094721uncharacterized LOC12009472198382906283863252Rat
1305355Col4a4collagen type IV alpha 4 chain98383317383875436Rat
71085Col4a3collagen type IV alpha 3 chain98387584984004955Rat
1310230Mffmitochondrial fission factor98400779884036039Rat
1588633Tm4sf20transmembrane 4 L six family member 2098403871584052615Rat
41118077LOC120094722uncharacterized LOC12009472298404353984047154Rat
41192800LOC120094723uncharacterized LOC12009472398407402184082651Rat
1560041Agfg1ArfGAP with FG repeats 198412484584182615Rat
11476313LOC10835200460S ribosomal protein L30-like98426224084265380Rat
1311413Slc19a3solute carrier family 19 member 398427572284299368Rat
3646Ccl20C-C motif chemokine ligand 2098438903184391629Rat
1561436Daw1dynein assembly factor with WD repeats 198443555284472632Rat
1311951SphkapSPHK1 interactor, AKAP domain containing98450938384657582Rat
41106528LOC120094724uncharacterized LOC12009472498501268385038789Rat
1334135Or5ak27-ps1olfactory receptor family 5 subfamily AK member 27, pseudogene 198505117685051964Rat
41331248LOC120094919small nucleolar RNA SNORA1798517594485176070Rat
1560766Pid1phosphotyrosine interaction domain containing 198528433585503035Rat
1359385Dnerdelta/notch-like EGF repeat containing98558698585902461Rat
41173954LOC120094725uncharacterized LOC12009472598568638485693986Rat
1306607Trip12thyroid hormone receptor interactor 1298591669186043312Rat
1307870Fbxo36F-box protein 3698604252286107220Rat
1309675Slc16a14solute carrier family 16, member 1498611006686137546Rat
7595527LOC102550706uncharacterized LOC10255070698611970286126905Rat
40957244LOC120094727uncharacterized LOC12009472798613731486139788Rat
1310830Csprscomponent of Sp100-rs98616578386174596Rat
1310173Sp110SP110 nuclear body protein98620050386225355Rat
1306355Sp140SP140 nuclear body protein98622447286274724Rat
1359550Sp100SP100 nuclear antigen98631099086377036Rat
1563917A630001G21RiklRIKEN cDNA A630001G21 gene like98638177786405385Rat
9334462LOC103690562uncharacterized LOC10369056298640947386421040Rat
1565945Rps10-ps8ribosomal protein S10, pseudogene 898642216286422790Rat
1306390Cab39calcium binding protein 3998646309586524545Rat
1309503Itm2cintegral membrane protein 2C98654592786559745Rat
41289198LOC120094894U1 spliceosomal RNA98656550586565670Rat
1559828Gpr55G protein-coupled receptor 5598658490686640601Rat
1561755Srp14l1signal recognition particle 14 like 198664582986649077Rat
41119897LOC120094730uncharacterized LOC12009473098664897086663626Rat
1308164Spata3spermatogenesis associated 398666035286672272Rat
41266300LOC120094731uncharacterized LOC12009473198668501986707213Rat
2318569C9h2orf72similar to human chromosome 2 open reading frame 7298669176786699920Rat
621669Psmd1proteasome 26S subunit, non-ATPase 198670971486785213Rat
61801Htr2b5-hydroxytryptamine receptor 2B98673579386756638Rat
1305615Armc9armadillo repeat containing 998680279186928611Rat
7690483LOC102548542uncharacterized LOC10254854298689060086956019Rat
41055286Trnap-agg49transfer RNA proline (anticodon AGG) 4998693189386931965Rat
1310580B3gnt7UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 798695622086960171Rat
3153Nclnucleolin98699958887008112Rat
41013737Snora75small nucleolar RNA, H/ACA box 7598700024887000384Rat
41153847Snord20small nucleolar RNA, C/D box 2098700106887001147Rat
40940351Snord82small nucleolar RNA, C/D box 8298700451587004586Rat
619867Nmur1neuromedin U receptor 198703323187038070Rat
1564629Tex44testis expressed 4498707568487077102Rat
7714518LOC102548729uncharacterized LOC10254872998709320987102973Rat
41138001LOC120094734uncharacterized LOC12009473498709647687113703Rat
41309199LOC120094735uncharacterized LOC12009473598713565287154677Rat
61829Ptmaprothymosin alpha98717625187180333Rat
41178953LOC120094949small nucleolar RNA U1398719052987190633Rat
1306204Pde6dphosphodiesterase 6D98719298987237979Rat
40940829Trnav-aac37transfer RNA valine (anticodon AAC) 3798721626887216349Rat
1306918Cops7bCOP9 signalosome subunit 7B98723813287263967Rat
620850Nppcnatriuretic peptide C98732005187324251Rat
1560168Dis3l2DIS3-like 3'-5' exoribonuclease 298735540987736616Rat
2322949Nsa2-ps1NSA2 ribosome biogenesis factor, pseudogene 198759060687591465Rat
1583637Rpl21-ps1ribosomal protein L21, pseudogene 198763513387635684Rat
1565100Alpgalkaline phosphatase, germ cell98774872187761500Rat
2325055Alppalkaline phosphatase, placental98776584687768606Rat
2099Alpialkaline phosphatase, intestinal98777341187776877Rat
41363602LOC120094871U6 spliceosomal RNA98779243687792530Rat
621650Akp3alkaline phosphatase 3, intestine, not Mn requiring98780468087808715Rat
61806Ecel1endothelin converting enzyme-like 198781951687829154Rat
1563955Prss56serine protease 5698784280687859978Rat
2352Chrndcholinergic receptor nicotinic delta subunit98786241787870833Rat
2354Chrngcholinergic receptor nicotinic gamma subunit98787808587884193Rat
1307790Eif4e2eukaryotic translation initiation factor 4E family member 298788612687914470Rat
41329502LOC120094860U6 spliceosomal RNA98792549287925595Rat
1559565Efhd1EF-hand domain family, member D198793825987984917Rat
2318130Gigyf2GRB10 interacting GYF protein 298800121288127040Rat
41096162Trnav-aac33transfer RNA valine (anticodon AAC) 3398801670588016779Rat
621661Kcnj13potassium inwardly-rectifying channel, subfamily J, member 1398806300388071112Rat
1311447Snorcsecondary ossification center associated regulator of chondrocyte maturation98814051088145527Rat
1309055Ngefneuronal guanine nucleotide exchange factor98814695688244454Rat
3164Neu2neuraminidase 298821849488267356Rat
41139248LOC120094737uncharacterized LOC12009473798828213688287642Rat
2914Inpp5dinositol polyphosphate-5-phosphatase D98828768088392748Rat
1310631Atg16l1autophagy related 16-like 198842073788457530Rat
41229829Scarna6lsmall Cajal body-specific RNA 6 like98844206588442334Rat
41104869Scarna6small Cajal body-specific RNA 698845058488450846Rat
3619SagS-antigen visual arrestin98846779788508821Rat
1563309Dgkddiacylglycerol kinase, delta98851668688607349Rat
1309613Usp40ubiquitin specific peptidase 4098860792088678940Rat
1549771Ugt1a9UDP glucuronosyltransferase family 1 member A998869698188808465Rat
727833Ugt1a-ps1UDP glycosyltransferase 1 family, pseudogene 198871318488714042Rat
708474Ugt1a8UDP glucuronosyltransferase family 1 member A898872709488808465Rat
620950Ugt1a7cUDP glucuronosyltransferase 1 family, polypeptide A7C98873957788808465Rat
620949Ugt1a6UDP glucuronosyltransferase family 1 member A698874721388808465Rat
11517988LOC108351970uncharacterized LOC10835197098874889788759048Rat
1583689Ugt1a5UDP glucuronosyltransferase family 1 member A598876225088808465Rat
1594329Ugt1a4-psUDP glycosyltransferase 1 family, polypeptide A4, pseudogene98877258788773555Rat
1549728Ugt1a3UDP glycosyltransferase 1 family, polypeptide A398878032888808465Rat
1549741Ugt1a2UDP glucuronosyltransferase 1 family, polypeptide A298879121688808465Rat
1594215Dnajb3DnaJ heat shock protein family (Hsp40) member B398879554288796555Rat
3935Ugt1a1UDP glucuronosyltransferase family 1 member A198880134488808465Rat
1565687Mroh2amaestro heat-like repeat family member 2A98881451588862346Rat
1305846HjurpHolliday junction recognition protein98885337988867730Rat
1592977Ppid-ps21peptidylprolyl isomerase D, pseudogene 2198889168288893091Rat
620762Trpm8transient receptor potential cation channel, subfamily M, member 898889703988990167Rat
11512085LOC108351971uncharacterized LOC10835197198890685488909792Rat
40944180LOC120094914small nucleolar RNA SNORA1798899178588991916Rat
708488Spp2secreted phosphoprotein 298900685889026676Rat
7553846LOC102554187uncharacterized LOC10255418798906466489104187Rat
40983173LOC120094852uncharacterized LOC12009485298924012989242768Rat
1589685Arl4cARF like GTPase 4C98930033589303770Rat
41275851LOC120094738uncharacterized LOC12009473898931119889324968Rat
41155597LOC120094739uncharacterized LOC12009473998932522289345530Rat
9102062LOC103690569uncharacterized LOC10369056998946099289469978Rat
11424261Gapdh-ps25Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 2598952514989526174Rat
41225257LOC120094740uncharacterized LOC12009474098956540589590849Rat
620219Sh3bp4SH3-domain binding protein 498966015689739163Rat
7548599LOC102554430uncharacterized LOC10255443098977724089781278Rat
41056788LOC120094980U6 spliceosomal RNA98978862789788730Rat
7737812LOC102554475uncharacterized LOC10255447598990182189920445Rat
1309244Agap1ArfGAP with GTPase domain, ankyrin repeat and PH domain 199003972090475196Rat
41232573LOC120094807uncharacterized LOC12009480799023271790241118Rat
621866Gbx2gastrulation brain homeobox 299050963390512212Rat
1310850Asb18ankyrin repeat and SOCS box-containing 1899053135090595953Rat
7663504LOC102554789uncharacterized LOC10255478999059597190640971Rat
1305311Iqca1IQ motif containing with AAA domain 199062673590742563Rat
620601Ackr3atypical chemokine receptor 399079968290811246Rat
7705608LOC102555030uncharacterized LOC10255503099084553190856417Rat
40967038LOC120094742uncharacterized LOC12009474299096632090990369Rat
7593803LOC102555145uncharacterized LOC10255514599097464190981811Rat
41035686LOC120094743uncharacterized LOC12009474399102931191033418Rat
1311404Cops8COP9 signalosome subunit 899120742791217258Rat
1308704Col6a3collagen type VI alpha 3 chain99136157891439434Rat
1310733Mlphmelanophilin99150741091542984Rat
628634Prlhprolactin releasing hormone99154312891549022Rat
1562478Rab17RAB17, member RAS oncogene family99155292491566759Rat
1359548Lrrfip1LRR binding FLII interacting protein 199159203291720250Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10359D9Got10923298788122287881453Ratregion
10965D9Arb525798700863587008898Ratregion
34088D9Mgh211098636963186369743Ratregion
33688D9Mit717598920003589200212Ratregion
36009D9Rat5414998131436481314513Ratregion
37216D9Rat6720998838794388388152Ratregion
36838D9Rat5116698451486184515030Ratregion
37002D9Rat5312898119923881199366Ratregion
37052D9Rat615798850705588507212Ratregion
37190D9Rat9921998921570589215924Ratregion
37724D9Rat8420998519398285194188Ratregion
37932D9Rat6820798907535889075565Ratregion
35691D9Rat510898707346887073594Ratregion
39654D9Rat11123098910172889101958Ratregion
39658D9Rat14220198988242189882624Ratregion
39970D9Rat14110099154551291545612Ratregion
38270D9Rat9720199109075891090963Ratregion
38388D9Rat7424198369287683693117Ratregion
40080D9Rat14412798385153183851658Ratregion
39384D9Rat14523498329093383291164Ratregion
42896D9Rat16822998698659586986825Ratregion
42362D9Rat18623498259800082598227Ratregion
42363D9Rat18723198526960585269815Ratregion
44638D9Got9425197941223679412487Ratregion
44644D9Got9112597984257979842704Ratregion
44646D9Got9314598104993281050077Ratregion
44647D9Got10826398697266986972940Ratregion
44648D9Got10720798617469286174899Ratregion
44649D9Wox216298778709587787267Ratregion
44650D9Got10617298608030486080475Ratregion
44653D9Got11413898972242989722567Ratregion
44654D9Got11116799071994690720113Ratregion
44656D9Got11212299142450391424625Ratregion
60644D9Got10028498256128282561565Ratregion
60648D9Got10419597951306679513258Ratregion
625807D9Got11025698925897489259230Ratregion
61287D9Uia625797927151179271759Ratregion
66548D9Uia514698627799986278145Ratregion
67303D9Arb428299099946990999751Ratregion
1630368D9Kyo214498941444189414585Ratregion
1630391D9Got22921898225052082250738Ratregion
1631961D9Ulb125498312954483129798Ratregion
1627000D9Mco1528798878671888787007Ratregion
1629733D9Wox3321098080922980809441Ratregion
1638663D9Got24225098952728589527535Ratregion
1638754D9Got24025998952728589527572Ratregion
1638983D9Got23623198831784988318080Ratregion
1639583D9Wox2998850156488501685Ratregion
1639583D9Wox2998850156488501966Ratregion
1639583D9Wox2998850165388501685Ratregion
1640929D9Got24618498267316982673353Ratregion
1641780D9Wox2722898788130487881532Ratregion
1632892D9Wox3998780764487807855Ratregion
1633278D9Wox4019998878675588786956Ratregion
1640606D9Got23414898861979988619947Ratregion
1635653D9Wox1213398394073883940871Ratregion
1635697D9Wox2511698360565083605766Ratregion
1635700D9Wox2620498360243583602639Ratregion
1634068D9Got21218998347586583476054Ratregion
1634189D9Got22525598229104582291298Ratregion
1634643D9Got20615998229032682290487Ratregion
2302873D9Mco9323999161661491616855Ratregion
2302889D9Mco9228099139542391395703Ratregion
2302897D9Mco9022598016827780168502Ratregion
2302943D9Mco9120098067632180676524Ratregion
2302949D9Mco8925097983367679833926Ratregion
5035937PMC312758P18398700806487008147Ratregion
5035991PMC55360P119498700791987008113Ratregion
5039232RH12758820598717099987171204Ratregion
5039302RH12762820498403893884039142Ratregion
5036484Scg294098080381480804754Ratregion
5036695AU04890028198147040581470686Ratregion
5036941AU04969516598184004781840212Ratregion
5033955RH14075115498621444786214601Ratregion
5025970RH13040018098564183985642019Ratregion
7205754stSG614592098037582580376623Ratregion
7205754stSG614592098037584380376623Ratregion
7206136Irs18198354973883549819Ratregion
5031560AU04792221898002882880029046Ratregion
5026332RH13180119198803264588032836Ratregion
5026596RH13281718098973890589739085Ratregion
5029261RH14412511798636660086366717Ratregion
5035088D15S12725698090647680906732Ratregion
5027097SHGC-3616410798016444680164553Ratregion
5027191AW48793711598025041380250528Ratregion
5027193AB0151368598439121184391296Ratregion
5032725RH13507120698111148481111690Ratregion
5032855RH13673612298683483586834957Ratregion
5028378AA96051218698652432186524507Ratregion
5033695RH13977322098591902685919246Ratregion
5054925RH14350312599041740490417529Ratregion
5055017RH14355815498418074284180896Ratregion
5055033RH14356711598886225288862367Ratregion
5051308AV12953110798791277187912878Ratregion
5055989RH14411916698781976187819927Ratregion
5052083RH9483020098880814088808341Ratregion
5057414AA99772119799081088890811085Ratregion
5054687RH14336719298104100681041198Ratregion
5058640BE10223021699068943590689651Ratregion
5058662BE10228416398417862084178783Ratregion
5056189RH14423510198632925186329352Ratregion
5058834BF38713917899020876990208947Ratregion
5056739RH14455210798830439588304502Ratregion
505216501.MMHAP90FLA1.seq15599143142991431584Ratregion
5052347X5935814997956929879569447Ratregion
5055319RH14373325398531833685318589Ratregion
5058302BF38699216998705811587058284Ratregion
5059080BF38743515799160491191605068Ratregion
5059122BE10288116599030194390302108Ratregion
5059176BE10297715898190589681906054Ratregion
5053621RH14275415497964771179647865Ratregion
5053713RH14280810298979363389793735Ratregion
5051208RH13450220097988804679888246Ratregion
5041722RH12902119698361521683615412Ratregion
5043376RH12999022098637666286376882Ratregion
5041122RH12867520298630240886302610Ratregion
5041468RH12887421998450944184509660Ratregion
5045842RH13141018798826709188267278Ratregion
5044724RH13076718098879559988795779Ratregion
5044770RH13079422098104097781041197Ratregion
5046436RH13175219898930039389300591Ratregion
5045138RH13100620598375186983752074Ratregion
5046160RH13159318298678418586784367Ratregion
5045674RH13131319798591672885916926Ratregion
5047834RH13255520398669970786699910Ratregion
5048996RH13322621998690843786908656Ratregion
5046726RH13191919498652249786522691Ratregion
5048124RH13272218499085602490856208Ratregion
5047050RH13210521598885346188853676Ratregion
5049732RH13365018298839255988392741Ratregion
5049768RH13367021798111248581112702Ratregion
5048400RH13288220998012492280125131Ratregion
5048492RH13293420198860694888607149Ratregion
5042352RH12938522099136163591361855Ratregion
5048554RH13297020498418231384182517Ratregion
5048566RH13297718899155353191553719Ratregion
5040428RH12827718598773631787736502Ratregion
5043164RH12986822099121696491217184Ratregion
7192183Scg210298080847580808577Ratregion
5042350RH12938419198151311881513309Ratregion
5040862RH12852619898652431986524517Ratregion
5043272RH12993118199121700391217184Ratregion
5043560RH13009521498798466287984876Ratregion
5040294RH12820121498719323287193446Ratregion
5041170RH12870219598375498583755180Ratregion
5041494RH12888915298591835585918507Ratregion
5072812RH13706722098655945186559671Ratregion
5075106RH13840224998691568986915938Ratregion
5075494RH13862612698811836488118591Ratregion
5075536RH13865012198016452780164648Ratregion
5074286RH13792917298692701786927189Ratregion
5076078RH13896613898790655087906688Ratregion
5076252RH13906816898845382588453993Ratregion
5076416RH13916314998648516586485314Ratregion
5072832RH13708021198025031980250530Ratregion
5076666RH13930819999030101490301213Ratregion
5077028RH13951720997990241679902625Ratregion
5077330RH13969418698427591784276103Ratregion
5076030RH13893819398717289987173092Ratregion
5077572RH13983318098400265584002835Ratregion
5076768RH13936718798080326280803449Ratregion
5077564RH13982920098363532883635528Ratregion
5078226RH14021718297942584279426024Ratregion
5078792RH14055518898721698887217176Ratregion
5078014RH14009218798723641487236601Ratregion
5078852RH14058919498719736387197557Ratregion
5078454RH14035213597990251679902651Ratregion
5079124RH14074913498112486581124999Ratregion
5079124RH14074913498112486581124999Ratregion
5079190RH14078820699039580290396008Ratregion
5073156RH13727118098695996086960140Ratregion
5071090RH13488121998699752586997744Ratregion
5071162RH13492318097994772379947903Ratregion
5078680RH14048716199066368790663848Ratregion
5078874RH14060221798184404581844262Ratregion
5073616RH13753914798405515984055306Ratregion
5072966RH13715716298860801488608176Ratregion
5071514RH13512621398454207784542290Ratregion
5070854RH13474418398383328483833467Ratregion
5074292RH13793217598844973688449911Ratregion
5071780RH13528020998885737488857583Ratregion
5061820AW52716915298782585487826006Ratregion
5066902AU04808317098342158683421756Ratregion
5067390AU04778213998341833583418474Ratregion
5067490AU04771322998271573682715960Ratregion
5067998AU04741117098118975281189924Ratregion
5069394AU04652814798021058180210770Ratregion
5069394AU04652814798021062180210770Ratregion
5069532AU04643617899111401691114191Ratregion
5070273RH9457216098700446887004628Ratregion
5070305RH12593620998591983885920047Ratregion
5069154AU04668929198075995680760247Ratregion
5060164AI07252019498159341881593612Ratregion
5060550BE11032615999062678790626946Ratregion
5060580BI28604615098930235989302508Ratregion
5060626BI28626416998886093288861101Ratregion
5060678BE11081317298393353783933709Ratregion
5064032BE12048416498845080988450973Ratregion
5065706BF40624715898374818383748341Ratregion
5061254BE09944315498562674285626896Ratregion
5061304BE09952716398717726887177431Ratregion
5063076BI29585619598180378981803984Ratregion
5066272PMC133987P244398700732287007765Ratregion
5061524BE10539915098930235989302509Ratregion
5083167BI28188218498613754186137725Ratregion
5090437AU04975018398259279082592975Ratregion
5081543BE11729619797989705679897253Ratregion
5081675BE11797315698265212382652279Ratregion
5080866RH141828098095077480950955Ratregion
5088883AU04882619298384429683844488Ratregion
5083441BF39125811497988443779884551Ratregion
5503111CUL3-110698160890581609462Ratregion
5503144PSMD110098672993686730503Ratregion
5503352UniSTS:24053335499080970090810054Ratregion
5503512TRIP12_393049598591973285920227Ratregion
5507567D17S178995098797254587973112Ratregion
5503138OMM105655598392747083928025Ratregion
5503340UniSTS:238129098788325287884005Ratregion
5503597UniSTS:46471314298360159283601734Ratregion
5503599UniSTS:46471237298360222683602598Ratregion
5504218RH8000418798016441480164601Ratregion
5505318Nppc80598732344187324246Ratregion
5505740UniSTS:492179138098707567087077050Ratregion
5506165UniSTS:498517118798858995388591140Ratregion
5507021fk33e12.x122098652129886522120Ratregion
5499703UniSTS:23416719298652432286524514Ratregion
5499707UniSTS:23417120999046948290469691Ratregion
5500807stSG62996750298625370686254208Ratregion
11354904D9Mco11025098869803788698287Ratregion
11354906D9Mco12121899097588790976105Ratregion
11354931D9Mco11520098954172889541928Ratregion
11353958D9Mco12422099111397791114199Ratregion
11353953D9Mco11686798964905489649921Ratregion
Position Markers

Flank 1: (D9Uia6)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2979,271,511 - 79,271,759 (+)MAPPER
Rnor_6.0983,686,153 - 83,686,404NCBI
Rnor_5.0983,451,810 - 83,452,061UniSTS
RGSC_v3.4977,170,797 - 77,171,049RGD
RGSC_v3.4977,170,798 - 77,171,049UniSTS
RGSC_v3.1977,354,082 - 77,354,334RGD
Celera976,786,573 - 76,786,824UniSTS
Cytogenetic Map9 RGD
Peak: (D9Got111)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2990,719,946 - 90,720,113 (+)MAPPER
Rnor_6.0997,276,144 - 97,276,310NCBI
Rnor_5.0996,967,774 - 96,967,940UniSTS
RGSC_v3.4989,249,726 - 89,249,893RGD
RGSC_v3.4989,249,727 - 89,249,893UniSTS
RGSC_v3.1989,454,495 - 89,454,662RGD
Celera988,267,055 - 88,267,221UniSTS
RH 2.0 Map9927.4RGD
Cytogenetic Map9q35UniSTS
Flank 2: (D9Mco93)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2991,616,614 - 91,616,855 (+)MAPPER
Rnor_6.0998,164,065 - 98,164,303NCBI
Rnor_5.0997,845,199 - 97,845,437UniSTS
RGSC_v3.4990,249,649 - 90,249,887UniSTS
Celera989,159,614 - 89,159,852UniSTS
Cytogenetic Map9 RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11353957Bmd92Bone mineral density QTL 920.01tibia mineral mass (VT:1000283)volumetric bone mineral density (CMO:0001553)94611419991114199Rat
724547Cm21Cardiac mass QTL 212.7heart mass (VT:0007028)calculated heart weight (CMO:0000073)979271511102910209Rat
61385Edpm9Estrogen-dependent pituitary mass QTL 93.430.05pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)963869687108869687Rat
70218Cm28Cardiac mass QTL 288.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)92526804479271759Rat
724544Uae9Urinary albumin excretion QTL 94.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)925268044114175309Rat
1578760Cm53Cardiac mass QTL 533.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)956771635101771635Rat
1581580Uae34Urinary albumin excretion QTL 34urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)96207227596470995Rat
12879506Pur33Proteinuria QTL 33urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)94464992189649921Rat
1354626Bvd1Brain ventricular dilatation QTL 13.730.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)975712843111552878Rat
7794784Mcs31Mammary carcinoma susceptibility QTL 312.98mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)977813894111552878Rat
731164Uae25Urinary albumin excretion QTL 253.50.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)925661188100929786Rat
10058949Gmadr5Adrenal mass QTL 520.014adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)94279151387976209Rat
1578757Pur6Proteinuria QTL 63.30.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)96207227596470995Rat
4889943Bss90Bone structure and strength QTL 904.1tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)98636963192058970Rat
631656Bp108Blood pressure QTL 1085.970.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94859825193598251Rat
8662828Vetf6Vascular elastic tissue fragility QTL 63.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)93696235992058970Rat
61352Bp34Blood pressure QTL 345arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94249534379271511Rat
724515Uae16Urinary albumin excretion QTL 168urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)958163035100929646Rat
731171Glom6Glomerulus QTL 62.80.0003kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)964573531109573531Rat
2303178Bp334Blood pressure QTL 3343.70.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)97927151191616855Rat
70186Niddm26Non-insulin dependent diabetes mellitus QTL 263.87blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)92207116986369743Rat
7207814Bmd91Bone mineral density QTL 913.5femur size trait (VT:1000369)femoral neck cross-sectional area (CMO:0001697)92375414483851531Rat
6903941Pur31Proteinuria QTL 310.036urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)94019418885194188Rat
2290450Scl57Serum cholesterol level QTL 574.15blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)93696235995410867Rat
11353949Bp393Blood pressure QTL 393arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94019418885194188Rat
11353951Bp394Blood pressure QTL 394arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94464992189649921Rat
10054125Srcrt7Stress Responsive Cort QTL 73.330.0011blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)9187073594Rat
1300134Bp185Blood pressure QTL 1853.73arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)961381434104821652Rat
4889852Pur26Proteinuria QTL 26150.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)977813894101597663Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general number of animals used: 20 2302803
qtl_general measurement method: animals were on 0.3% NaCl diet, at 40-42 of age they were on 2% NaCl diet; systolic blood pressure was measured by tail-cuff method on days 24-28 of high salt regimen 2302803