Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Sgpp2 (sphingosine-1-phosphate phosphatase 2) Rattus norvegicus
Symbol: Sgpp2
Name: sphingosine-1-phosphate phosphatase 2
Description: Predicted to have sphingosine-1-phosphate phosphatase activity. Predicted to be involved in phospholipid dephosphorylation; regulation of type B pancreatic cell proliferation; and sphingosine metabolic process. Predicted to localize to endoplasmic reticulum and endoplasmic reticulum membrane. Orthologous to human SGPP2 (sphingosine-1-phosphate phosphatase 2); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; INTERACTS WITH 6-propyl-2-thiouracil; amphetamine; bisphenol A.
Type: protein-coding
RefSeq Status: INFERRED
Also known as: LOC301543; RGD1565739; similar to Sphingosine-1-phosphate phosphotase 2; sphingosine-1-phosphate phosphotase 2
Homo sapiens (human) : SGPP2 (sphingosine-1-phosphate phosphatase 2)  HGNC  Alliance
Mus musculus (house mouse) : Sgpp2 (sphingosine-1-phosphate phosphatase 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sgpp2 (sphingosine-1-phosphate phosphatase 2)
Pan paniscus (bonobo/pygmy chimpanzee) : SGPP2 (sphingosine-1-phosphate phosphatase 2)
Canis lupus familiaris (dog) : SGPP2 (sphingosine-1-phosphate phosphatase 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sgpp2 (sphingosine-1-phosphate phosphatase 2)
Sus scrofa (pig) : SGPP2 (sphingosine-1-phosphate phosphatase 2)
Chlorocebus sabaeus (African green monkey) : SGPP2 (sphingosine-1-phosphate phosphatase 2)
Heterocephalus glaber (naked mole-rat) : Sgpp2 (sphingosine-1-phosphate phosphatase 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.0984,203,094 - 84,321,269 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl984,203,072 - 84,319,874 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0983,961,688 - 84,075,946 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4977,679,320 - 77,799,178 (+)NCBIRGSC3.4rn4RGSC3.4
Celera977,274,290 - 77,388,812 (+)NCBICelera
Cytogenetic Map9q33NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
More on Sgpp2
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1565739
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.