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Gene: Sgpp2 (sphingosine-1-phosphate phosphatase 2) Rattus norvegicus
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Symbol: Sgpp2
Name: sphingosine-1-phosphate phosphatase 2
Description: Predicted to have sphingosine-1-phosphate phosphatase activity. Predicted to be involved in phospholipid dephosphorylation; regulation of type B pancreatic cell proliferation; and sphingosine metabolic process. Predicted to localize to endoplasmic reticulum and endoplasmic reticulum membrane. Orthologous to human SGPP2 (sphingosine-1-phosphate phosphatase 2); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; INTERACTS WITH 6-propyl-2-thiouracil; amphetamine; bisphenol A.
Type: protein-coding
RefSeq Status: INFERRED
Also known as: LOC301543; RGD1565739; similar to Sphingosine-1-phosphate phosphotase 2; sphingosine-1-phosphate phosphotase 2
Orthologs:
Homo sapiens (human) : SGPP2 (sphingosine-1-phosphate phosphatase 2)  HGNC  Alliance
Mus musculus (house mouse) : Sgpp2 (sphingosine-1-phosphate phosphatase 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sgpp2 (sphingosine-1-phosphate phosphatase 2)
Pan paniscus (bonobo/pygmy chimpanzee) : SGPP2 (sphingosine-1-phosphate phosphatase 2)
Canis lupus familiaris (dog) : SGPP2 (sphingosine-1-phosphate phosphatase 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sgpp2 (sphingosine-1-phosphate phosphatase 2)
Sus scrofa (pig) : SGPP2 (sphingosine-1-phosphate phosphatase 2)
Chlorocebus sabaeus (African green monkey) : SGPP2 (sphingosine-1-phosphate phosphatase 2)
Heterocephalus glaber (naked mole-rat) : Sgpp2 (sphingosine-1-phosphate phosphatase 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0984,203,094 - 84,321,269 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl984,203,072 - 84,319,874 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0983,961,688 - 84,075,946 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4977,679,320 - 77,799,178 (+)NCBIRGSC3.4rn4RGSC3.4
Celera977,274,290 - 77,388,812 (+)NCBICelera
Cytogenetic Map9q33NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sgpp2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1565739
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.