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Gene: Lrrfip1 (LRR binding FLII interacting protein 1) Rattus norvegicus
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Symbol: Lrrfip1
Name: LRR binding FLII interacting protein 1
Description: Predicted to have DNA-binding transcription repressor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and protein homodimerization activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II and positive regulation of NF-kappaB transcription factor activity. Predicted to localize to cytosol and plasma membrane. Orthologous to human LRRFIP1 (LRR binding FLII interacting protein 1); INTERACTS WITH (+)-schisandrin B; 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: leucine rich repeat (in FLII) interacting protein 1; leucine-rich repeat flightless-interacting protein 1; LOC367314; LRR FLII-interacting protein 1; similar to FLI-LRR associated protein-1
Orthologs:
Homo sapiens (human) : LRRFIP1 (LRR binding FLII interacting protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Lrrfip1 (leucine rich repeat (in FLII) interacting protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Lrrfip1 (LRR binding FLII interacting protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : LRRFIP1 (LRR binding FLII interacting protein 1)
Canis lupus familiaris (dog) : LRRFIP1 (LRR binding FLII interacting protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Lrrfip1 (LRR binding FLII interacting protein 1)
Sus scrofa (pig) : LRRFIP1 (LRR binding FLII interacting protein 1)
Chlorocebus sabaeus (African green monkey) : LRRFIP1 (LRR binding FLII interacting protein 1)
Heterocephalus glaber (naked mole-rat) : Lrrfip1 (LRR binding FLII interacting protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0998,139,484 - 98,268,148 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl998,190,829 - 98,257,735 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0997,820,647 - 97,950,350 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4990,278,891 - 90,346,980 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1990,483,659 - 90,551,748 (+)NCBI
Celera989,186,375 - 89,252,422 (+)NCBICelera
Cytogenetic Map9q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Lrrfip1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1359548
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.