Bvd1 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Bvd1 (Brain ventricular dilatation QTL 1) Rattus norvegicus

Symbol: Bvd1
Name: Brain ventricular dilatation QTL 1
RGD ID: 1354626
Trait: brain ventricle morphology trait   (VT:0000822)    
Measurement Type: hydrocephalus severity score   (CMO:0001881)    
LOD Score: 3.73
P Value: 0.001
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2975,712,843 - 111,552,878RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0981,411,073 - 119,983,851RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0981,176,785 - 119,437,586RGDRnor5.0
RGSC_v3.4973,454,285 - 110,864,247RGDRGSC3.4
RGSC_v3.1973,601,268 - 111,073,727RGD
Cross Type: backcrosstoH-Tx/Hcj
Strains Crossed: F344/NHsd HTX/Hcj 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Vertebrate Trait

Rat Strain
F344/NHsd  (IEA)
HTX/Hcj  (IEA)

References

References - curated
1. Jones HC, etal., Exp Neurol 2004 Nov;190(1):79-90.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
61806Ecel1endothelin converting enzyme-like 198781443487829154Rat
3646Ccl20C-C motif chemokine ligand 2098438903184391629Rat
619975Hdac1lhistone deacetylase 1-like98045313980454593Rat
619798Ppp4r1protein phosphatase 4, regulatory subunit 19105391271105450626Rat
71089Epb41l3erythrocyte membrane protein band 4.1-like 39109056178109260607Rat
61801Htr2b5-hydroxytryptamine receptor 2B98673579386756640Rat
61803VapaVAMP associated protein A9105177904105208400Rat
70552Acsl3acyl-CoA synthetase long-chain family member 398014099680164636Rat
3527Rab12RAB12, member RAS oncogene family9106480301106506895Rat
61829Ptmaprothymosin alpha98717625187180333Rat
61853Gpc1glypican 199339623493424047Rat
61945Per2period circadian regulator 299200728992049551Rat
3252Pampeptidylglycine alpha-amidating monooxygenase99799858198271966Rat
2124Spegstriated muscle enriched protein kinase97686571476923170Rat
3619SagS-antigen visual arrestin98846779788508821Rat
2905Cxcr1C-X-C motif chemokine receptor 197576812475771122Rat
2912Inhainhibin subunit alpha97699446576997366Rat
2914Inpp5dinositol polyphosphate-5-phosphatase D98828768088392748Rat
2073Agxtalanine--glyoxylate and serine--pyruvate aminotransferase99367538493685337Rat
70984BokBCL2 family apoptosis regulator BOK99422349394234476Rat
620056Septin2septin 299401814194051386Rat
3748Serpine2serpin family E member 298112474681188866Rat
2352Chrndcholinergic receptor nicotinic delta subunit98786241787870833Rat
2354Chrngcholinergic receptor nicotinic gamma subunit98787808587884193Rat
3038Man2a1mannosidase, alpha, class 2A, member 19104252001104408349Rat
2922Irs1insulin receptor substrate 198355296483605797Rat
620021IhhIndian hedgehog signaling molecule97650431576510532Rat
3555Resp18regulated endocrine-specific protein 1897676517976771824Rat
628768Cryba2crystallin, beta A297644725076457968Rat
621025Plcd4phospholipase C, delta 497611552376158602Rat
620949Ugt1a6UDP glucuronosyltransferase family 1 member A698874722988808465Rat
708431Slco6c1solute carrier organic anion transporter family, member 6c199750002897580776Rat
631400Gpbar1G protein-coupled bile acid receptor 197586215175863140Rat
629474Stk16serine/threonine kinase 1697670559176708859Rat
619979Hdac4histone deacetylase 499250346792750164Rat
631436Myom1myomesin 19110916156111039344Rat
727915Cyp27a1cytochrome P450, family 27, subfamily a, polypeptide 197626465576294551Rat
620686Desdesmin97685097976858695Rat
2906Cxcr2C-X-C motif chemokine receptor 297572949375735868Rat
708474Ugt1a8UDP glucuronosyltransferase family 1 member A898872709488808465Rat
621286Twist2twist family bHLH transcription factor 299237474092419222Rat
628860FevFEV transcription factor, ETS family member97643916476443603Rat
620601Ackr3atypical chemokine receptor 399079968290811246Rat
620219Sh3bp4SH3-domain binding protein 498966015689739163Rat
708488Spp2secreted phosphoprotein 298900685889026676Rat
620128IlkapILK associated serine/threonine phosphatase99196644091988791Rat
620950Ugt1a7cUDP glucuronosyltransferase 1 family, polypeptide A7C98873957788808465Rat
621661Kcnj13potassium inwardly-rectifying channel, subfamily J, member 1398806300388071112Rat
621669Psmd1proteasome 26S subunit, non-ATPase 198670971486785213Rat
628712Zfp161zinc finger protein 1619109333440109338646Rat
620776Ptprmprotein tyrosine phosphatase, receptor type, M9106639573107343698Rat
620777Ptprnprotein tyrosine phosphatase, receptor type, N97674101076756704Rat
628855Myl12bmyosin light chain 12B9110873855110888187Rat
619867Nmur1neuromedin U receptor 198703323187038070Rat
621134Ralbp1ralA binding protein 19105456425105492711Rat
727968Ndufa10NADH:ubiquinone oxidoreductase subunit A1099300703493041825Rat
620273Pja2praja ring finger ubiquitin ligase 29103956678104006763Rat
1601463Slc11a1solute carrier family 11 member 197595719375968115Rat
1303210Farsbphenylalanyl-tRNA synthetase subunit beta97988785279947082Rat
620962Hdlbphigh density lipoprotein binding protein99394809994018040Rat
3153Nclnucleolin98699958887008112Rat
1307048Vil1villin 197599114176018860Rat
621845St8sia4ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 499599415096084617Rat
3626Scg2secretogranin II98080307480808646Rat
621733Ndufv2NADH:ubiquinone oxidoreductase core subunit V29105690454105710669Rat
621068Asic4acid sensing ion channel subunit family member 497694153276962900Rat
1304559Wnt6Wnt family member 697632988276343523Rat
71085Col4a3collagen type IV alpha 3 chain98387595884004955Rat
69354Capn10calpain 1099349813293510494Rat
3164Neu2neuraminidase 298821849488267356Rat
71077Abcb6ATP binding cassette subfamily B member 697666855476677263Rat
620762Trpm8transient receptor potential cation channel, subfamily M, member 898889703988990167Rat
620431Pax3paired box 397956745579664042Rat
1304588Lpin2lipin 29111083378111158193Rat
628598Rab31RAB31, member RAS oncogene family9105246712105382973Rat
61870Ramp1receptor activity modifying protein 199176548191816152Rat
620223Dlgap1DLG associated protein 19109857500110726817Rat
1307234Smchd1structural maintenance of chromosomes flexible hinge domain containing 19111243445111387272Rat
1305846HjurpHolliday junction recognition protein98885337988867730Rat
1305848Arpc2actin related protein 2/3 complex, subunit 297582078275851471Rat
1305629Ctdsp1CTD small phosphatase 197597369475979298Rat
1306918Cops7bCOP9 signalosome subunit 7B98723813287263967Rat
620850Nppcnatriuretic peptide C98732005187324251Rat
1305615Armc9armadillo repeat containing 998680279186928860Rat
1306390Cab39calcium binding protein 3998646300886524545Rat
1304996Kif1akinesin family member 1A99356303393647412Rat
1306607Trip12thyroid hormone receptor interactor 1298591669186043312Rat
1306260Zfand2bzinc finger AN1-type containing 2B97666546676668447Rat
1307449Gin1gypsy retrotransposon integrase 199829359698315155Rat
1306355Sp140SP140 nuclear body protein98622447286274724Rat
1305046Stk11ipserine/threonine kinase 11 interacting protein97701229777027989Rat
1307318Stk36serine/threonine kinase 3697617692276204423Rat
1306273FerFER tyrosine kinase9103520452103827364Rat
1306281Aampangio-associated, migratory cell protein97586338275869188Rat
1306204Pde6dphosphodiesterase 6D98719299187237926Rat
1306844Retreg2reticulophagy regulator family member 297664028276646400Rat
1307976D2hgdhD-2-hydroxyglutarate dehydrogenase99435055594368384Rat
1306451Mettl4methyltransferase like 49111440976111523871Rat
1309973Fam174afamily with sequence similarity 174, member A99574281595761083Rat
708465Otosotospiralin99321694893220614Rat
1307608Ube2fubiquitin-conjugating enzyme E2F (putative)99184595491881145Rat
1307015Wnt10aWnt family member 10A97634993176362400Rat
2099Alpialkaline phosphatase, intestinal98777341187776877Rat
620391Efna5ephrin A59102316753102595480Rat
727833Ugt1a9-psUDP glycosyltransferase 1 family, polypeptide A9, pseudogene98871318488714042Rat
1307402Slc23a3solute carrier family 23, member 397662262176633188Rat
1310118Ankrd12ankyrin repeat domain 129105583273105687957Rat
1308003Farp2FERM, ARH/RhoGEF and pleckstrin domain protein 299405365094162212Rat
1305343Emilin2elastin microfibril interfacer 29111160708111220463Rat
1307207Lama1laminin subunit alpha 19107692770107816847Rat
1307790Eif4e2eukaryotic translation initiation factor 4E family member 298788607887901058Rat
1305996Wdfy1WD repeat and FYVE domain containing 198103485281092823Rat
3935Ugt1a1UDP glucuronosyltransferase family 1 member A198880134488808465Rat
727809Stk25serine/threonine kinase 2599416183494174095Rat
1306477Rhbdd1rhomboid domain containing 198363003783748690Rat
3712Slc4a3solute carrier family 4 member 397703624377053940Rat
620278Slco6b1solute carrier organic anion transporter family member 6B199726665597347336Rat
1306073Obsl1obscurin like cytoskeletal adaptor 197696780276993565Rat
1311495Cnot9CCR4-NOT transcription complex subunit 997608426976109111Rat
1308624Neu4neuraminidase 499439692094402576Rat
1310173Sp110SP110 nuclear body protein98620050386225355Rat
1333294Olr1346olfactory receptor 134699311732893118299Rat
1302987Ano7anoctamin 799391752493945323Rat
1333345Olr1347olfactory receptor 134799313148393132454Rat
1309648Zfp142zinc finger protein 14297614105376164784Rat
1333489Olr1350olfactory receptor 135099314957393150544Rat
1309556Mrpl44mitochondrial ribosomal protein L4498110665881111709Rat
1359385Dnerdelta/notch-like EGF repeat containing98558698585902820Rat
1359409Tmbim1transmembrane BAX inhibitor motif containing 197587183575889366Rat
1309773Fbxl17F-box and leucine-rich repeat protein 179102780573103206755Rat
621866Gbx2gastrulation brain homeobox 299050963390512212Rat
1560587Epha4Eph receptor A497881546078958139Rat
1310450Atg9aautophagy related 9A97667740376688035Rat
1310830Csprscomponent of Sp100-rs98616578386174596Rat
1310850Asb18ankyrin repeat and SOCS box-containing 1899053135090595953Rat
621650Akp3alkaline phosphatase 3, intestine, not Mn requiring98780474987807866Rat
1311644Mogat1monoacylglycerol O-acyltransferase 197998096379988513Rat
1311772Ap1s3adaptor related protein complex 1 subunit sigma 398095040281039685Rat
1359388Slco6d1solute carrier organic anion transporter family, member 6d199758309397739994Rat
735175Cnppd1cyclin Pas1/PHO80 domain containing 197663347576640164Rat
1310760Asb1ankyrin repeat and SOCS box-containing 199212033292140790Rat
1312047Hes6hes family bHLH transcription factor 699200183892003580Rat
1333615Olr1349olfactory receptor 134999313663293146531Rat
1308319Mtcl1microtubule crosslinking factor 19106305282106441782Rat
1307908Ing5inhibitor of growth family, member 599432691994344220Rat
1310196Washc1WASH complex subunit 19105722779105830836Rat
1560678Rufy4RUN and FYVE domain containing 497570293775727719Rat
1311658Pdcd1programmed cell death 199441878694431945Rat
1311447Snorcsecondary ossification center associated regulator of chondrocyte maturation98814041988145891Rat
1549771Ugt1a9UDP glucuronosyltransferase family 1 member A998869698188808465Rat
1310631Atg16l1autophagy related 16-like 198842073788457530Rat
1310902Nudt12nudix hydrolase 1299874162798755039Rat
1309474Glb1lgalactosidase, beta 1-like97669332576705548Rat
1309252Traf3ip1TRAF3 interacting protein 199207362292110427Rat
1309055Ngefneuronal guanine nucleotide exchange factor98814695688244454Rat
1308169Ppp1r7protein phosphatase 1, regulatory subunit 799388606893909991Rat
1311413Slc19a3solute carrier family 19 member 398427572284299368Rat
1309404Gpr35G protein-coupled receptor 3599352669193539302Rat
1309613Usp40ubiquitin specific peptidase 4098860792088678940Rat
1309614Dtymkdeoxythymidylate kinase99431555294324386Rat
1308698Prkag3protein kinase AMP-activated non-catalytic subunit gamma 397629571576304959Rat
1308190Cul3cullin 398159264181670428Rat
1305311Iqca1IQ motif containing with AAA domain 199062673590742563Rat
1308164Spata3spermatogenesis associated 398666035286672272Rat
1309537Myl12amyosin light chain 12A9110891970110899655Rat
1310154Ndc80NDC80 kinetochore complex component9111407191111440921Rat
1308704Col6a3collagen type VI alpha 3 chain99136157891439434Rat
1309819Chchd2coiled-coil-helix-coiled-coil-helix domain containing 299450043994501110Rat
1310230Mffmitochondrial fission factor98400779884036039Rat
1309244Agap1ArfGAP with GTPase domain, ankyrin repeat and PH domain 199003976090475196Rat
1306675Ddx11DEAD/H-box helicase 119105833234105862844Rat
1309503Itm2cintegral membrane protein 2C98654592786559745Rat
1306139Rnf11l2ring finger protein 11-like 298218177982183568Rat
1311404Cops8COP9 signalosome subunit 899120742791217258Rat
1311557Rnf25ring finger protein 2597617003776176924Rat
1305355Col4a4collagen type IV alpha 4 chain98383317383875436Rat
1310580B3gnt7UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 798695622086960171Rat
1309664Atg4bautophagy related 4B, cysteine peptidase99428241794314109Rat
1309675Slc16a14solute carrier family 16, member 1498611006686137546Rat
1306146PaskPAS domain containing serine/threonine kinase99384427593886036Rat
1307870Fbxo36F-box protein 3698604252286107220Rat
1309644Klhl30kelch-like family member 3099194244391952756Rat
1565739Sgpp2sphingosine-1-phosphate phosphatase 297976265879884665Rat
1561436Daw1dynein assembly factor with WD repeats 198443555284472632Rat
1561963Dock10dedicator of cytokinesis 1098184359982101540Rat
1561755RGD1561755similar to Signal Recognition Particle Alu Rna Binding Heterodimer, Srp91498664582986649077Rat
1562440Mterf4mitochondrial transcription termination factor 499383416293838838Rat
1563955Prss56serine protease 5698784280687859978Rat
1311215Twsg1twisted gastrulation BMP signaling modulator 19105533116105567525Rat
1563309Dgkddiacylglycerol kinase, delta98851668688607349Rat
1562432Espnlespin-like99191204991935292Rat
1559548Tmem232transmembrane protein 2329104887669105115737Rat
1566037RGD1566037similar to Ribosomal protein SA98091006880912886Rat
1563917RGD1563917similar to Nuclear autoantigen Sp-100 (Speckled 100 kDa)98638177786405385Rat
1563832Lrrc30leucine rich repeat containing 309107624479107626551Rat
1565687Mroh2amaestro heat-like repeat family member 2A98881451588862346Rat
1563692Mab21l4mab-21 like 499369045593701267Rat
1560041Agfg1ArfGAP with FG repeats 198412487884178149Rat
1333070Olr1352olfactory receptor 135299317336093174328Rat
1562530Cdk5r2cyclin-dependent kinase 5 regulatory subunit 297641625176417719Rat
1564730RGD1564730similar to ribosomal protein L3699281561392816212Rat
1303048Slco4c1solute carrier organic anion transporter family, member 4C199718016297229135Rat
1302957Kcne4potassium voltage-gated channel subfamily E regulatory subunit 498024342980251533Rat
1359251Txndc2thioredoxin domain containing 29105230575105235131Rat
1560925RGD1560925similar to 2610034M16Rik protein99859122298717920Rat
1359338Nhej1nonhomologous end-joining factor 197652632276622488Rat
1332746Olr1343olfactory receptor 134399304847593049413Rat
1359473Thap4THAP domain containing 499424258194282312Rat
1560644GmppaGDP-mannose pyrophosphorylase A97692672476934274Rat
1333848Olr1353olfactory receptor 135399318459493194689Rat
1334135Olr1342-psolfactory receptor pseudogene 134298505117685051964Rat
1334141Olr1345olfactory receptor 134599307003193070969Rat
1359242Ankzf1ankyrin repeat and zinc finger peptidyl tRNA hydrolase 197668822376695141Rat
1549741Ugt1a2UDP glucuronosyltransferase 1 family, polypeptide A298879121688808465Rat
1310517Tgif1TGFB-induced factor homeobox 19110748094110757714Rat
1559955RGD1559955similar to 40S ribosomal protein S1799909327299093890Rat
1549728Ugt1a3UDP glycosyltransferase 1 family, polypeptide A398878032888808465Rat
1310733Mlphmelanophilin99150741091542984Rat
1560357RGD1560357similar to peptidylprolyl isomerase A97631300576314011Rat
1311951SphkapSPHK1 interactor, AKAP domain containing98450938384657582Rat
1333485Olr1351olfactory receptor 135199316024893161207Rat
628634Prlhprolactin releasing hormone99154312891549022Rat
1562136Macirmacrophage immunometabolism regulator99842076098440818Rat
1559828Gpr55G protein-coupled receptor 5598658490686640601Rat
1334214Olr1344olfactory receptor 134499305674093057675Rat
1333005Olr1348-psolfactory receptor pseudogene 134899313324693133449Rat
1560168Dis3l2DIS3-like 3'-5' exoribonuclease 298735540987736616Rat
1560766Pid1phosphotyrosine interaction domain containing 198528433585503035Rat
1359548Lrrfip1LRR binding FLII interacting protein 199159203291720250Rat
1359550Sp100SP100 nuclear antigen98631099086377036Rat
1559565Efhd1EF-hand domain family, member D198793825987984917Rat
1359458Chpfchondroitin polymerizing factor97696317876967878Rat
1562478Rab17RAB17, member RAS oncogene family99155292491566759Rat
1359658Bcs1lBCS1 homolog, ubiquinol-cytochrome c reductase complex chaperone97616492576168940Rat
1583848Dnpepaspartyl aminopeptidase97679993176808841Rat
1583637Rpl21-ps1ribosomal protein L21, pseudogene 198763513387635684Rat
1587524L3mbtl4L3MBTL histone methyl-lysine binding protein 49108295004108747879Rat
1566074Rbm44RNA binding motif protein 4499173115391756783Rat
1566079Sned1sushi, nidogen and EGF-like domains 199377408793834003Rat
1565945RGD1565945similar to ribosomal protein S1098642216286422790Rat
1564629Tex44testis expressed 4498707568487077102Rat
1561734Tmem200ctransmembrane protein 200C9108806063108811901Rat
1559882Arhgap28Rho GTPase activating protein 289107832584107998030Rat
1562727Aqp12aaquaporin 12A99355452793560011Rat
1566007RGD1566007similar to hypothetical protein 4930509O229105957452105971785Rat
1565100Alpgalkaline phosphatase, germ cell98774872187761500Rat
1564536RGD1564536similar to Cofilin, non-muscle isoform (Cofilin-1)97843364778434301Rat
1359623Tuba4atubulin, alpha 4A97670961776714327Rat
1563002Cfap65cilia and flagella associated protein 6597645921176494199Rat
1359514Sclyselenocysteine lyase99189026991910947Rat
1593854Gal3st2galactose-3-O-sulfotransferase 299438245694387990Rat
1590765Ppip5k2diphosphoinositol pentakisphosphate kinase 299831528098394537Rat
1593789LOC685468similar to nucleolar complex associated 3 homolog99461937094650913Rat
1588633Tm4sf20transmembrane 4 L six family member 2098403871584052615Rat
1591029LOC689599hypothetical protein LOC6895999106543112106580780Rat
1591035Dnajb2DnaJ heat shock protein family (Hsp40) member B297673106076739278Rat
1589680LOC367333hypothetical LOC3673339106129631106137205Rat
1589682LOC367322similar to tumor protein, translationally-controlled 199787450697875077Rat
1589685Arl4cADP ribosylation factor like GTPase 4C98930033589303770Rat
1592977LOC680352similar to peptidylprolyl isomerase D98889168288893091Rat
1584688Erfeerythroferrone99195697191964846Rat
1589866Fam124bfamily with sequence similarity 124 member B98151494781533869Rat
1585470LOC686129similar to bone morphogenetic protein receptor, type 1A9100602229100605006Rat
1583689Ugt1a5UDP glucuronosyltransferase family 1 member A598876225088808465Rat
1597166LOC301725similar to 60S ribosomal protein L359105925950105926646Rat
1596071Catipciliogenesis associated TTC17 interacting protein97594593375953618Rat
1598338LOC301604similar to Pyruvate kinase isozyme M299182347291834122Rat
1595220Dusp28dual specificity phosphatase 2899347249293474207Rat
1595229Ankmy1ankyrin repeat and MYND domain containing 199342366493476651Rat
1592616LOC685532hypothetical protein LOC68553299489069494892294Rat
1595210Rnpepl1arginyl aminopeptidase like 199347660093486331Rat
1594742Ttll4tubulin tyrosine ligase like 497622165976258219Rat
1590183LOC685785similar to solute carrier organic anion transporter family, member 6c199740938897461111Rat
1594329Ugt1a4-psUDP glycosyltransferase 1 family, polypeptide A4, pseudogene98877258788773555Rat
1596701Cops9COP9 signalosome subunit 999320984393214774Rat
1594215Dnajb3DnaJ heat shock protein family (Hsp40) member B398879554288796555Rat
1592668Scand3-ps1SCAN domain containing 3, pseudogene 199450062994501122Rat
1592645LOC685502similar to zinc finger protein 20799471618294759721Rat
2300155PnkdPNKD metallo-beta-lactamase domain containing97586862075937126Rat
2319715Usp37ubiquitin specific peptidase 3797601886376118732Rat
2319152Tmem198transmembrane protein 19897696807976974131Rat
2318569LOC100362216hypothetical protein LOC10036221698669176786699920Rat
2318130Gigyf2GRB10 interacting GYF protein 298800121288127040Rat
2319343LOC100361833ATP synthase lipid-binding protein, mitochondrial-like97654937076549840Rat
2323399LOC100363241ribosomal protein L24-like9108837168108844780Rat
2322949LOC100363496hypothetical LOC10036349698759060687591465Rat
2324352Akain1A-kinase anchor inhibitor 19109389654109436029Rat
2325360Mir375microRNA 37597645791176457985Rat
2325394Mir26bmicroRNA 26b97597659675976680Rat
2324748LOC100363142ribosomal protein S26-like9108073668108074017Rat
2324563LOC100362040Ac2-143-like99405057794092832Rat
2325055Alppalkaline phosphatase, placental98776584687768606Rat
6490130LOC100911876protein SET-like99452574394574248Rat
6488392LOC100912214uncharacterized LOC10091221499199437591996238Rat
6499336LOC100910317elongation factor 1-alpha 1-like98086618480867575Rat
6498359LOC100910493ras-related protein Rab-18-like98178454981786163Rat
7514331LOC102551819U3 small nucleolar RNA-associated protein 14 homolog B-like98012062280129166Rat
7521510LOC102551060uncharacterized LOC10255106097896537978982823Rat
7506283LOC102549980uncharacterized LOC10254998097649418676502960Rat
7513527LOC102548291uncharacterized LOC10254829199216421992167303Rat
7516098LOC102549383uncharacterized LOC1025493839106454196106463002Rat
7538675LOC102555570uncharacterized LOC1025555709110754109110760371Rat
7519496LOC102553550uncharacterized LOC1025535509105754932105760191Rat
7520878LOC102553881probable ATP-dependent RNA helicase DDX11-like9105736820105759042Rat
7663504LOC102554789uncharacterized LOC10255478999059597190640971Rat
7663763Rps27a-ps9ribosomal protein S27a, pseudogene 999242577992426321Rat
7614446LOC102556146nuclease-sensitive element-binding protein 1-like9111253296111254245Rat
7559628LOC102550477uncharacterized LOC10255047797685832976873352Rat
7577720LOC102552268uncharacterized LOC1025522689104080473104090589Rat
7656325LOC102549694protein NYNRIN-like99387646993885044Rat
7626994LOC10254951760S ribosomal protein L29-like9106526222106526701Rat
7657246LOC102555849uncharacterized LOC1025558499111044904111070189Rat
7595527LOC102550706uncharacterized LOC10255070698611970286126905Rat
7595609LOC102555687uncharacterized LOC1025556879110900218110903794Rat
7610058LOC102553020uncharacterized LOC10255302099722913997261503Rat
7570114LOC102553709uncharacterized LOC10255370998344640383484732Rat
7570937LOC102546692uncharacterized LOC1025466929102664654102668053Rat
7593803LOC102555145uncharacterized LOC10255514599097464190981811Rat
7574102LOC102555914tRNA-splicing endonuclease subunit Sen2-like9111099648111105546Rat
7574457LOC102550603uncharacterized LOC1025506039108195804108198286Rat
7548599LOC102554430uncharacterized LOC10255443098977724089781278Rat
7606582LOC102552880uncharacterized LOC1025528809109308321109332227Rat
7607069LOC102554935uncharacterized LOC1025549359105808131105817824Rat
7553846LOC102554187uncharacterized LOC10255418798906466489104187Rat
7588003LOC102554367sperm motility kinase W-like9105876898105901108Rat
7693218LOC102555426uncharacterized LOC1025554269110658044110666509Rat
7694684LOC102554696uncharacterized LOC1025546969105992228106081835Rat
7695235LOC102554903uncharacterized LOC10255490397671474776730584Rat
7705608LOC102555030uncharacterized LOC10255503099084553190856417Rat
7706814LOC102547942uncharacterized LOC10254794299188056691890075Rat
7726443LOC102555239sperm motility kinase W-like9105946864106050218Rat
7727178LOC102552654uncharacterized LOC10255265499640731196442600Rat
7690483LOC102548542uncharacterized LOC10254854298689060086956019Rat
7682815LOC102552718uncharacterized LOC1025527189105011551105028066Rat
7737812LOC102554475uncharacterized LOC10255447598990182189920445Rat
7714518LOC102548729uncharacterized LOC10254872998709320987102973Rat
7740505LOC102547414zinc finger protein 120-like99546270695463751Rat
7716002LOC102546629uncharacterized LOC1025466299102666911102677582Rat
7696905LOC102553382uncharacterized LOC1025533829105994520106018505Rat
7718140LOC102549382PCNA-associated factor-like97638401676392184Rat
7672326LOC102552808uncharacterized LOC1025528089105381302105384784Rat
7728635LOC102556490uncharacterized LOC1025564909102279478102295083Rat
7728853Crocc2ciliary rootlet coiled-coil, rootletin family member 299370878693769617Rat
9102062LOC103690569uncharacterized LOC10369056998946099289469978Rat
9112007LOC103690574ubiquitin-associated domain-containing protein 1 pseudogene99384071293842719Rat
9197887LOC103690566ice-structuring glycoprotein-like98405615984056734Rat
9171458Nyap2neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 298240679782658250Rat
9308951LOC103693253WAS protein family homolog 1-like9106024639106027594Rat
9384454LOC10369058740S ribosomal protein S25 pseudogene99565867595659046Rat
9281499LOC103690558uncharacterized LOC10369055897582005675820840Rat
9387184LOC103690592uncharacterized LOC1036905929107717553107722787Rat
9334462LOC103690562uncharacterized LOC10369056298640947386421040Rat
9346176LOC103690559uncharacterized LOC10369055997939681379426093Rat
9448552LOC103690581tubulin alpha-1B chain pseudogene9102869196102876650Rat
9685085Mir149microRNA 14999341438993414477Rat
11362438LOC108352035uncharacterized LOC10835203599893282698940487Rat
11358779LOC108351981uncharacterized LOC1083519819104033886104038086Rat
11456389LOC108351980uncharacterized LOC1083519809103726001103727080Rat
11449647LOC108352031glyceraldehyde-3-phosphate dehydrogenase pseudogene98336527983366295Rat
11455030LOC108351956RING finger protein 223-like97968147879684988Rat
11462050LOC108348307putative sperm motility kinase W9106111205106125574Rat
11451317LOC108351964uncharacterized LOC10835196497834128378353399Rat
11441754LOC108351966uncharacterized LOC10835196697840676678510208Rat
11432437LOC108352014uncharacterized LOC1083520149106855145106861310Rat
11405256LOC108351976uncharacterized LOC10835197699885796198904468Rat
11406805LOC10835203040S ribosomal protein S2 pseudogene98111517781116076Rat
11417562LOC108352034uncharacterized LOC10835203499421687394217837Rat
11424261LOC108352033glyceraldehyde-3-phosphate dehydrogenase-like98952514989526174Rat
11410190LOC108351974uncharacterized LOC10835197499281772392865423Rat
11476313LOC10835200460S ribosomal protein L30-like98426224084265380Rat
11502495LOC108351978uncharacterized LOC10835197899844709698454842Rat
11504255LOC108352015dephospho-CoA kinase domain-containing protein pseudogene9110261729110270008Rat
11504586LOC108351955uncharacterized LOC10835195597693729576940926Rat
11496487LOC108351983uncharacterized LOC1083519839104707415104717405Rat
11512085LOC108351971uncharacterized LOC10835197198890685488909792Rat
11484248LOC108349306putative sperm motility kinase W9105911001105913224Rat
11517988LOC108351970uncharacterized LOC10835197098874889788759048Rat
11491820LOC108352013uncharacterized LOC1083520139103207033103225986Rat
11492101LOC108351965uncharacterized LOC10835196597851091578541993Rat
41138001LOC120094734uncharacterized LOC12009473498709647687113703Rat
41275851LOC120094738uncharacterized LOC12009473898931119889324968Rat
41139248LOC120094737uncharacterized LOC12009473798828213688287642Rat
41206352LOC120094765basic proline-rich protein-like9105566911105572037Rat
41207194LOC120094759uncharacterized LOC1200947599102487656102498261Rat
41281036LOC120094755uncharacterized LOC1200947559100320816100337741Rat
41118077LOC120094722uncharacterized LOC12009472298404353984047154Rat
41173954LOC120094725uncharacterized LOC12009472598568638485693986Rat
41148085LOC120094774uncharacterized LOC1200947749106093973106096111Rat
41210998NEWGENE_40940579transfer RNA leucine (anticodon AAG)9105397716105397796Rat
41328829LOC120094924small nucleolar RNA SNORA179104607118104607247Rat
41329502LOC120094860U6 spliceosomal RNA98792549287925595Rat
41329714LOC120094769uncharacterized LOC1200947699105725482105729155Rat
41363602LOC120094871U6 spliceosomal RNA98779243687792530Rat
41096162NEWGENE_40933816transfer RNA valine (anticodon AAC)98801670588016779Rat
41119897LOC120094730uncharacterized LOC12009473098664897086663626Rat
41120957LOC120094716uncharacterized LOC12009471697889685178933600Rat
41176099LOC120094749uncharacterized LOC12009474999369094793696037Rat
41331248LOC120094919small nucleolar RNA SNORA1798517594485176070Rat
41365424LOC120094589putative sperm motility kinase W9105987492105988457Rat
41391292LOC120094761uncharacterized LOC1200947619104394277104396639Rat
41150265LOC120094772ATP-dependent DNA helicase DDX11-like9106076509106093788Rat
41178646LOC120094770uncharacterized LOC1200947709105826563105829574Rat
41178953LOC120094949small nucleolar RNA U1398719052987190633Rat
41153847LOC120094885small nucleolar RNA SNORD2098700106887001147Rat
41266143LOC1200949515S ribosomal RNA99415679494156912Rat
41266300LOC120094731uncharacterized LOC12009473198668501986707213Rat
41266326LOC120094719uncharacterized LOC12009471998316197583182540Rat
41266346LOC120094714uncharacterized LOC12009471497694623276947900Rat
41395183LOC120094750uncharacterized LOC12009475099581984395825054Rat
41395376NEWGENE_40926764transfer RNA proline (anticodon AGG)97606777276067852Rat
41125149LOC120094773uncharacterized LOC1200947739106021195106023245Rat
41155597LOC120094739uncharacterized LOC12009473998932522289345530Rat
41192800LOC120094723uncharacterized LOC12009472398407402184082651Rat
41288558LOC120094808uncharacterized LOC12009480899025367190301267Rat
41289198LOC120094894U1 spliceosomal RNA98656550586565670Rat
41289249LOC120094711uncharacterized LOC12009471197608471676090207Rat
41345836LOC120094974U6 spliceosomal RNA9104060817104060923Rat
41102138LOC120094812uncharacterized LOC1200948129106743184106751186Rat
41127926LOC12009476360S ribosomal protein L19-like9105108731105110179Rat
41160873LOC120094710uncharacterized LOC12009471097588047575889459Rat
41196131LOC120094823putative sperm motility kinase W9105762206105763237Rat
41348918LOC120094939small nucleolar RNA SNORA1799542152095421616Rat
41104869LOC120094896small Cajal body-specific RNA 698845058488450846Rat
41128648LOC120094585glyceraldehyde-3-phosphate dehydrogenase-like99735703597358357Rat
41229829LOC120094897small Cajal body-specific RNA 698844206588442334Rat
41229971LOC120094810uncharacterized LOC1200948109103266798103279343Rat
41293215LOC120094986U6 spliceosomal RNA99390673393906836Rat
41106528LOC120094724uncharacterized LOC12009472498501268385038789Rat
41107223LOC120094741uncharacterized LOC12009474199098204990996757Rat
41351480LOC120094779uncharacterized LOC1200947799111033994111034364Rat
41132162LOC120094985U6 spliceosomal RNA99208750692087608Rat
41200243LOC120094728uncharacterized LOC12009472898644420386453311Rat
41231727LOC120094854ferritin light chain 1-like9105518447105520770Rat
41232573LOC120094807uncharacterized LOC12009480799023271790241118Rat
41275197LOC120094718cytochrome c, somatic-like98107866181092612Rat
41320137LOC120094925small nucleolar RNA SNORA1799712804597128175Rat
41133306LOC120094756uncharacterized LOC1200947569100416164100553687Rat
41202132LOC120094979U6 spliceosomal RNA99930440999304515Rat
41233501LOC120094751uncharacterized LOC12009475199591321895960037Rat
40996703LOC120094748uncharacterized LOC12009474899354109493549241Rat
40972669LOC120094890small nucleolar RNA SNORA4499260122092601359Rat
40998509LOC120094713uncharacterized LOC12009471397690245676921926Rat
41011003LOC120094877U7 small nuclear RNA9111148631111148693Rat
40949588LOC120094729uncharacterized LOC12009472998652439486545913Rat
40949615LOC120094936small nucleolar RNA SNORA1798087056180870674Rat
40973822LOC120094851uncharacterized LOC12009485197937539879380326Rat
40950838LOC120093109putative sperm motility kinase W9105880489105882110Rat
40974462LOC120094771spindlin-2-like9106059362106061254Rat
40974577LOC120094977U6 spliceosomal RNA9111081719111081825Rat
40974776LOC120094745uncharacterized LOC12009474599238718892400105Rat
40952464LOC120094975U6 spliceosomal RNA97975781579757917Rat
40976842LOC120094855uncharacterized LOC1200948559106246548106249794Rat
41012887LOC120094746signal peptidase complex subunit 3-like99303549493038160Rat
41013737LOC120094881small nucleolar RNA SNORA7598700024887000384Rat
40926184LOC120094762hypoxanthine-guanine phosphoribosyltransferase-like9105004754105006560Rat
40953535LOC120094814uncharacterized LOC1200948149110288993110292709Rat
40954341LOC120094865U6 spliceosomal RNA99351284493512931Rat
40954510LOC120094824spindlin-2-like9105781504105782339Rat
40977941LOC120094850uncharacterized LOC12009485097752644877540491Rat
40978519LOC120094757uncharacterized LOC1200947579101577047101591773Rat
40957244LOC120094727uncharacterized LOC12009472798613731486139788Rat
40983058LOC120094715uncharacterized LOC12009471597711987877144297Rat
40983173LOC120094852uncharacterized LOC12009485298924012989242768Rat
41003698LOC12009459140S ribosomal protein S10-like9108120999108122987Rat
40984701LOC120094776uncharacterized LOC1200947769107961921107963215Rat
40985578NEWGENE_40933816transfer RNA valine (anticodon AAC)97609924176099313Rat
40986825LOC120094767uncharacterized LOC1200947679105733955105735596Rat
40963239LOC120094857uncharacterized LOC1200948579107639405107641412Rat
41009587LOC120094856uncharacterized LOC1200948569107478401107480416Rat
41010654LOC120094588spindlin-2-like9105965637105972659Rat
40940351LOC120094883small nucleolar RNA SNORD8298700451587004586Rat
40940829NEWGENE_40933816transfer RNA valine (anticodon AAC)98721626887216349Rat
40965981LOC120094809uncharacterized LOC12009480999398578693989762Rat
40967038LOC120094742uncharacterized LOC12009474299096632090990369Rat
40992437LOC120094726uncharacterized LOC12009472698608361486085120Rat
40942445LOC120094712uncharacterized LOC12009471297674560976750739Rat
40967822LOC120094825glyceraldehyde-3-phosphate dehydrogenase-like9108470335108471352Rat
40993185LOC120094777uncharacterized LOC1200947779110860521110869727Rat
40944180LOC120094914small nucleolar RNA SNORA1798899178588991916Rat
40970647LOC120094732uncharacterized LOC12009473298687081486874105Rat
41312733LOC120094811uncharacterized LOC1200948119102924816102933216Rat
41023977LOC120094584CXXC motif containing zinc binding protein-like99657454496583661Rat
41025224LOC120094736uncharacterized LOC12009473698718430287194314Rat
41025529LOC1200948585S ribosomal RNA9104784301104784419Rat
41245564LOC120094891small nucleolar RNA SNORA4397857850178578638Rat
41245914LOC120094752uncharacterized LOC12009475299620883596229501Rat
41246614LOC120094950U1 spliceosomal RNA9100241673100241835Rat
41316454LOC120094590putative sperm motility kinase W9105989168105990198Rat
41050941LOC120094768uncharacterized LOC1200947689105830848105832296Rat
41051343LOC120094586potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like99799691297998894Rat
41052192LOC12009458760S ribosomal protein L18-like9105120769105143212Rat
41080310LOC120094928small nucleolar RNA SNORA179102916976102917100Rat
41054576LOC120094778uncharacterized LOC1200947789110854699110874264Rat
41055286NEWGENE_40926764transfer RNA proline (anticodon AGG)98693189386931965Rat
41056435LOC120094775WASH complex subunit 1-like9106097337106103219Rat
41056788LOC120094980U6 spliceosomal RNA98978862789788730Rat
41317148LOC120094747uncharacterized LOC12009474799342929193434280Rat
41299434LOC120094720uncharacterized LOC12009472098370011483711914Rat
41225257LOC120094740uncharacterized LOC12009474098956540589590849Rat
41300199LOC120094721uncharacterized LOC12009472198382906283863252Rat
41035686LOC120094743uncharacterized LOC12009474399102931191033418Rat
41302765LOC120094754uncharacterized LOC12009475499951165699522408Rat
41334814LOC120094758uncharacterized LOC1200947589101690445101717311Rat
41038481LOC120094744uncharacterized LOC12009474499183820391840876Rat
41302973LOC120094764uncharacterized LOC1200947649105396219105398819Rat
41039594LOC120094813uncharacterized LOC1200948139107216101107234238Rat
41236287LOC120094926small nucleolar RNA SNORA1799894837498948498Rat
41305354LOC120094760uncharacterized LOC1200947609102742646102748788Rat
41018300LOC120094733uncharacterized LOC12009473398694832786954272Rat
41018431NEWGENE_6576114transfer RNA threonine (anticodon AGU)98033471680334790Rat
41019106LOC120094853uncharacterized LOC12009485398975472689756973Rat
41069405LOC120094753uncharacterized LOC12009475399636047096409723Rat
41309199LOC120094735uncharacterized LOC12009473598713565287154677Rat
41021246NEWGENE_40926764transfer RNA proline (anticodon AGG)99839748698397567Rat
41044929LOC120094766uncharacterized LOC1200947669105861678105876707Rat
41241510LOC120094717uncharacterized LOC12009471798064940180677567Rat
41022835LOC120094905U1 spliceosomal RNA97935164579351807Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10359D9Got10923298788122287881453Ratregion
10807D9Wox1012397699412376994246Ratregion
10965D9Arb525798700863587008898Ratregion
33794D9Mit82019107948703107948903Ratregion
33999D9Mit514297781389477814038Ratregion
34088D9Mgh211098636963186369743Ratregion
34294D9Mgh72449107973446107973690Ratregion
11296D9Arb312497594962675949750Ratregion
11312D9Bro116697702634377026453Ratregion
33650D9Mit11309105219893105220033Ratregion
33688D9Mit717598920003589200212Ratregion
36009D9Rat5414998131436481314513Ratregion
36027D9Rat31349100929646100929786Ratregion
36155D9Rat913697739687677397012Ratregion
36325D9Rat11379111552760111552878Ratregion
37216D9Rat6720998838794388388152Ratregion
37268D9Rat752129105369721105369933Ratregion
37312D9Rat10010199465802494658115Ratregion
35284D9Rat491669111067206111067356Ratregion
35284D9Rat491669111067206111067323Ratregion
35555D9Rat813397690295476903085Ratregion
36803D9Rat5015099355248293552632Ratregion
36838D9Rat5116698451486184515030Ratregion
36908D9Rat414899205881192058970Ratregion
37002D9Rat5312898119923881199366Ratregion
37052D9Rat615798850705588507212Ratregion
37190D9Rat9921998921570589215924Ratregion
37626D9Rat10720197791580877916013Ratregion
37724D9Rat8420998519398285194188Ratregion
37932D9Rat6820798907535889075565Ratregion
36620D9Rat482079110199119110199326Ratregion
35072D9Rat471709110025175110025345Ratregion
35691D9Rat510898707346887073594Ratregion
39654D9Rat11123098910172889101958Ratregion
39658D9Rat14220198988242189882624Ratregion
39970D9Rat14110099154551291545612Ratregion
38036D9Rat6420199249158992491790Ratregion
38048D9Rat9019697571284375713051Ratregion
38270D9Rat9720199109075891090963Ratregion
38388D9Rat7424198369287683693117Ratregion
40510D9Rat1091509101597509101597663Ratregion
40584D9Rat1531299101016130101016265Ratregion
38536D9Rat1032089107915537107915739Ratregion
40080D9Rat14412798385153183851658Ratregion
38902D9Rat8324599294927192949515Ratregion
39036D9Rat711089107078745107078837Ratregion
39380D9Rat1081339104821531104821652Ratregion
39384D9Rat14523498329093383291164Ratregion
39542D9Rat1401179103532184103532285Ratregion
42894D9Rat17020197762749377627685Ratregion
42896D9Rat16822998698659586986825Ratregion
42899D9Rat1662419107094693107094916Ratregion
42900D9Rat1652159111332055111332272Ratregion
42362D9Rat18623498259800082598227Ratregion
42363D9Rat18723198526960585269815Ratregion
40886D9Rat11214697869194278692080Ratregion
41600D9Rat11017499541071195410867Ratregion
41672D9Rat1632329102302629102302863Ratregion
44638D9Got9425197941223679412487Ratregion
44639D9Got9611697708160177081719Ratregion
44640D9Got9813697630759776307733Ratregion
44641D9Got9721497810013078100344Ratregion
44642D9Got9012597856243778562558Ratregion
44644D9Got9112597984257979842704Ratregion
44646D9Got9314598104993281050077Ratregion
44647D9Got10826398697266986972940Ratregion
44648D9Got10720798617469286174899Ratregion
44649D9Wox216298778709587787267Ratregion
44650D9Got10617298608030486080475Ratregion
44653D9Got11413898972242989722567Ratregion
44654D9Got11116799071994690720113Ratregion
44656D9Got11212299142450391424625Ratregion
44657D9Got11617099279342392793590Ratregion
44658D9Got11916499352575193525915Ratregion
44659D9Got11522899340536993405597Ratregion
44660D9Got12018499581054095810719Ratregion
44661D9Got12129699413659594136891Ratregion
44662D9Got11818799511644195116628Ratregion
44663D9Got12221999439383294394051Ratregion
44665D9Got12518099787255897872738Ratregion
44667D9Got1262829110940957110941239Ratregion
44668D9Got1271729110235618110235790Ratregion
44669D9Got1411629107870241107870403Ratregion
60644D9Got10028498256128282561565Ratregion
60645D9Got10127299235666392356935Ratregion
60646D9Got10212297890545778905579Ratregion
60648D9Got10419597951306679513258Ratregion
60671D9Got9513397665161876651753Ratregion
60672D9Got9917497595697175957145Ratregion
625807D9Got11025698925897489259230Ratregion
61287D9Uia625797927151179271759Ratregion
66426D9Mco418197885844678858631Ratregion
66432D9Mco728597885844878858739Ratregion
66548D9Uia514698627799986278145Ratregion
67303D9Arb428299099946990999751Ratregion
1358014D9Wox3115397576819175768344Ratregion
1358016D9Mco4316297676389676764058Ratregion
1630368D9Kyo214498941444189414585Ratregion
1630391D9Got22921898225052082250738Ratregion
1631961D9Ulb125498312954483129798Ratregion
1632142D9Got2182769102402586102402860Ratregion
1632157D9Got2231109109167104109167214Ratregion
1578935D9Mco1425797665062976650886Ratregion
1626784D9Mco5819897719213977192337Ratregion
1626791D9Mco6818897674235176742539Ratregion
1626797D9Mco3325797797343877973695Ratregion
1626811D9Mco6418197666240876662591Ratregion
1626813D9Mco4220397677283676773039Ratregion
1626824D9Mco3621697887117178871387Ratregion
1626841D9Mco4818097661811776618297Ratregion
1626843D9Mco4717797663479976634976Ratregion
1626867D9Mco7019597685301076853205Ratregion
1626889D9Mco3423397798897777989210Ratregion
1626892D9Mco5921097716872377168933Ratregion
1626899D9Mco6322197726037677260597Ratregion
1626918D9Mco4117597678345176783626Ratregion
1626973D9Mco4518597663832976638514Ratregion
1626987D9Mco5319797694352676943723Ratregion
1626996D9Mco7117397687423676874409Ratregion
1627000D9Mco1528798878671888787007Ratregion
1627019D9Mco2819497789582077896014Ratregion
1627032D9Mco4418897675782276758010Ratregion
1627065D9Mco4019997678510876785307Ratregion
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5070305RH12593620998591983885920047Ratregion
5070313X744389697674101676741112Ratregion
5069154AU04668929198075995680760247Ratregion
5069202AU04665113299289451792894646Ratregion
5060164AI07252019498159341881593612Ratregion
5065406AA92414419599424265794242852Ratregion
5060492BE11021616297584783275847994Ratregion
5060550BE11032615999062678790626946Ratregion
5062198BF39755220797582267675822883Ratregion
5063960BE1203171989107971721107971919Ratregion
5060848BF3892061349110760213110760347Ratregion
5064268BE1209501789110618214110618392Ratregion
5065826BE1099951699104230061104230230Ratregion
5065840AI04549020897614221576142423Ratregion
5065972BE1163572389106024759106024997Ratregion
5065972BE1163572389105732629105732867Ratregion
5063822AW53536816799402190294022069Ratregion
5065464BE1155921769105246928105247104Ratregion
5060478BE09821316797692238576922552Ratregion
5060580BI28604615098930235989302508Ratregion
5060608BE10407715599849273998492894Ratregion
5060626BI28626416998886093288861101Ratregion
5060632BE09874921897666863476668974Ratregion
5060678BE11081317298393353783933709Ratregion
5062170BE11287317799416209494162271Ratregion
5062212BF3975762389107836365107836603Ratregion
5064032BE12048416498845080988450973Ratregion
5064112BE11406121499833979598340009Ratregion
5065706BF40624715898374818383748341Ratregion
5060892BF401259949107717654107717749Ratregion
5065892AA96445118297685850176858683Ratregion
5065934BE1162041679102318698102318865Ratregion
5061076BG3794739299384443393844525Ratregion
5062882BE1132062059107583335107583540Ratregion
5062938BI28905111297702966777029779Ratregion
5066170BF4137242299111472551111472780Ratregion
5061254BE09944315498562674285626896Ratregion
5061304BE09952716398717726887177431Ratregion
5063056AA95582816997669336776693536Ratregion
5063076BI29585619598180378981803984Ratregion
5066272PMC133987P244398700732287007765Ratregion
5061524BE10539915098930235989302509Ratregion
5084398AI17670719499416134494161538Ratregion
5087088BE10699317099822665398226823Ratregion
5087348BQ19398416297667698176677143Ratregion
5082501BE11958915399168012791680280Ratregion
5086512AW5299031519111137486111137637Ratregion
5087313BM38950116899961419399614361Ratregion
5082675BE1199861569110681429110681585Ratregion
5082961BF39049015699415662394156779Ratregion
5087333BM38959316897895391578954083Ratregion
5087498PMC209322P137897685105976851437Ratregion
5083167BI28188218498613754186137725Ratregion
5089433AU0491532379105219894105220133Ratregion
5083657BI27667413999203482192034960Ratregion
5083873AI0106281689103819978103820146Ratregion
5088769AU0487651129109140746109140858Ratregion
5088839AU04880012997927095179271080Ratregion
5090437AU04975018398259279082592975Ratregion
5090571AU04983122399286189092862113Ratregion
5084176AA79943413097684866276848792Ratregion
5081543BE11729619797989705679897253Ratregion
5081675BE11797315698265212382652279Ratregion
5081685BG371570969106639761106639857Ratregion
5087791D1Bwg1450e17797692288076923057Ratregion
5087958Ihh11297650520976505321Ratregion
5087962UniSTS:14358744597699642776996872Ratregion
5080866RH141828098095077480950955Ratregion
5085139AI54814118397586287875863061Ratregion
5085161AW53258715899831720498317362Ratregion
5088883AU04882619298384429683844488Ratregion
5085647AI23079716699836648998366655Ratregion
5082525BE1196271629102802654102802816Ratregion
5082657BE11994618299391380793913989Ratregion
5080832RH14180821499195236791952581Ratregion
5084498AA9449701039105585246105585349Ratregion
5082717BF4169671139105456242105456355Ratregion
5082977BF39053815399341786993418022Ratregion
5081208RH14202720397898257678982779Ratregion
5084736AI1713111809111000576111000755Ratregion
5084998AI23691118197664575376645934Ratregion
5083217BI27543414997650678376506932Ratregion
5083329BF41786917199393921593939386Ratregion
5081623BE11767216597615051976150684Ratregion
5081631BF41427913199404859994049469Ratregion
5083441BF39125811497988443779884551Ratregion
5085824BF38816815999321699993217158Ratregion
5128489D9Mco10023297599003975990271Ratregion
5128492D9Mco10122097614576676145986Ratregion
5128494D9Mco10223097617534676175576Ratregion
5503057Wnt10a52297636166376362185Ratregion
5503111CUL3-110698160890581609462Ratregion
5503144PSMD110098672993686730503Ratregion
5503160ZNF207-114499475869794758840Ratregion
5503352UniSTS:24053335499080970090810054Ratregion
5503512TRIP12_393049598591973285920227Ratregion
5507495ECD0644870797694241076943117Ratregion
5507567D17S178995098797254587973112Ratregion
5503138OMM105655598392747083928025Ratregion
5503270UniSTS:2376781039102319253102319356Ratregion
5503340UniSTS:238129098788325287884005Ratregion
5507757REN5287822397687824176878464Ratregion
5507759REN5303123597691284376913078Ratregion
5507761REN5313419297693466076934852Ratregion
5507763REN5314125197693616676936417Ratregion
5507765REN5316727097694186376942133Ratregion
5507767REN5316625197694165976941910Ratregion
5507769REN5316526997694141076941679Ratregion
5507771REN5341327397699275776993030Ratregion
5507773REN5417124997716174177161990Ratregion
5507775REN5431223297720270477202936Ratregion
5503597UniSTS:46471314298360159283601734Ratregion
5503599UniSTS:46471237298360222683602598Ratregion
5503807UniSTS:47132837297634030076340672Ratregion
5504494PMC23772P164397894966178950304Ratregion
5504218RH8000418798016441480164601Ratregion
5504332D17S1516E16899475900494759158Ratregion
5504588PMC310709P244697576867975769125Ratregion
5504855ha256484399586065595861498Ratregion
5505430Zfp1618069109336409109337215Ratregion
5505318Nppc80598732344187324246Ratregion
5505138Cryba277997644936776450146Ratregion
5505580UniSTS:484839110797641625076417357Ratregion
5505740UniSTS:492179138098707567087077050Ratregion
5506129UniSTS:4984317499342290593422979Ratregion
5506330MARC_49122-49123:1117732036:119897883086978831513Ratregion
5506165UniSTS:498517118798858995388591140Ratregion
5506567PTPRN_135056897674102276741590Ratregion
5506871G470171839110324526110324709Ratregion
5507021fk33e12.x122098652129886522120Ratregion
5500669RH1365902229100601827100602044Ratregion
5500244AI85424312297586954175870766Ratregion
5500274D19S841142499222013192221555Ratregion
5500410GDB:5429059597601811976018214Ratregion
5499703UniSTS:23416719298652432286524514Ratregion
5499705UniSTS:23417413199250753492507665Ratregion
5499707UniSTS:23417120999046948290469691Ratregion
5500795stSG625835126197629834276299603Ratregion
5500817stSG63297982197685693076857751Ratregion
5500819stSG633055122897694188976943117Ratregion
5500807stSG62996750298625370686254208Ratregion
5501033PMC124275P150499200864992009153Ratregion
5501329ECD1721140997699303776993446Ratregion
5501596RH808772269105472175105472401Ratregion
5501582RH765961719105177948105178119Ratregion
5502190MARC_8095-8096:996688286:168797674565076746337Ratregion
5506096UniSTS:49834370999342246293423171Ratregion
5501800MARC_12911-12912:999888716:317097644740976447937Ratregion
5501990MARC_21861-21862:1027094738:1105997617760376178662Ratregion
5502008MARC_23613-23614:1027526035:1097702629977027156Ratregion
5507256G6737222497685325976853650Ratregion
5502758EFNA51989102321143102321341Ratregion
5502253AI447901929103956718103956810Ratregion
11354904D9Mco11025098869803788698287Ratregion
11354906D9Mco12121899097588790976105Ratregion
11354931D9Mco11520098954172889541928Ratregion
11353958D9Mco12422099111397791114199Ratregion
11353953D9Mco11686798964905489649921Ratregion
Position Markers

Flank 1: (D9Rat90)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2975,712,843 - 75,713,051 (+)MAPPER
Rnor_6.0981,411,073 - 81,411,292NCBI
Rnor_5.0981,176,785 - 81,177,004UniSTS
RGSC_v3.4973,454,286 - 73,454,505UniSTS
RGSC_v3.4973,454,285 - 73,454,505RGD
RGSC_v3.1973,601,268 - 73,601,487RGD
Celera973,290,214 - 73,290,421UniSTS
RH 3.4 Map9698.4RGD
RH 3.4 Map9698.4UniSTS
RH 2.0 Map9772.6RGD
SHRSP x BN Map951.1998RGD
FHH x ACI Map949.02RGD
Cytogenetic Map9q33UniSTS
Peak: (D9Rat2)
Rat AssemblyChrPosition (strand)Source
mRatBN7.29112,146,143 - 112,146,278 (+)MAPPER
Rnor_6.09120,688,327 - 120,688,461NCBI
Rnor_5.09120,142,710 - 120,142,844UniSTS
RGSC_v3.49111,490,522 - 111,490,656UniSTS
RGSC_v3.49111,490,521 - 111,490,656RGD
RGSC_v3.19111,700,002 - 111,700,136RGD
Celera9109,257,358 - 109,257,492UniSTS
RH 3.4 Map9844.1RGD
RH 3.4 Map9844.1UniSTS
RH 2.0 Map91029.9RGD
SHRSP x BN Map979.4799RGD
Flank 2: (D9Rat1)
Rat AssemblyChrPosition (strand)Source
mRatBN7.29111,552,760 - 111,552,878 (+)MAPPER
Rnor_6.09119,983,734 - 119,983,851NCBI
Rnor_5.09119,437,469 - 119,437,586UniSTS
RGSC_v3.49110,864,130 - 110,864,247UniSTS
RGSC_v3.49110,864,129 - 110,864,247RGD
RGSC_v3.19111,073,609 - 111,073,727RGD
Celera9108,665,341 - 108,665,458UniSTS
RH 3.4 Map9880.1RGD
RH 3.4 Map9880.1UniSTS
RH 2.0 Map91043.1RGD
SHRSP x BN Map979.5198RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10054125Srcrt7Stress Responsive Cort QTL 73.330.0011blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)9187073594Rat
70186Niddm26Non-insulin dependent diabetes mellitus QTL 263.87blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)92207116986369743Rat
7207814Bmd91Bone mineral density QTL 913.5femur size trait (VT:1000369)femoral neck cross-sectional area (CMO:0001697)92375414483851531Rat
70218Cm28Cardiac mass QTL 288.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)92526804479271759Rat
724544Uae9Urinary albumin excretion QTL 94.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)925268044114175309Rat
731164Uae25Urinary albumin excretion QTL 253.50.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)925661188100929786Rat
7411656Foco26Food consumption QTL 269.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)93253550577535505Rat
7411571Bw138Body weight QTL 13814.30.001body mass (VT:0001259)body weight gain (CMO:0000420)93253550577535505Rat
1598834Memor11Memory QTL 112.5exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)93696235977814038Rat
8662828Vetf6Vascular elastic tissue fragility QTL 63.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)93696235992058970Rat
2290450Scl57Serum cholesterol level QTL 574.15blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)93696235995410867Rat
6903941Pur31Proteinuria QTL 310.036total urine protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)94019418885194188Rat
11353949Bp393Blood pressure QTL 393arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94019418885194188Rat
61352Bp34Blood pressure QTL 345arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94249534379271511Rat
10058949Gmadr5Adrenal mass QTL 520.014adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)94279151387976209Rat
11353951Bp394Blood pressure QTL 394arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94464992189649921Rat
12879506Pur33Proteinuria QTL 33total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)94464992189649921Rat
11353957Bmd92Bone mineral density QTL 920.01tibia mineral mass (VT:1000283)volumetric bone mineral density (CMO:0001553)94611419991114199Rat
631656Bp108Blood pressure QTL 1085.970.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94859825193598251Rat
2303170Bp332Blood pressure QTL 3323.730.027arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)95584784177026453Rat
2303180Bp333Blood pressure QTL 3330.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)95662771378595166Rat
2303180Bp333Blood pressure QTL 3330.001arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)95662771378595166Rat
2303180Bp333Blood pressure QTL 3330.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)95662771378595166Rat
1578760Cm53Cardiac mass QTL 533.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)956771635101771635Rat
724515Uae16Urinary albumin excretion QTL 168urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)958163035100929646Rat
1300134Bp185Blood pressure QTL 1853.73arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)961381434104821652Rat
1581580Uae34Urinary albumin excretion QTL 34urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)96207227596470995Rat
1578757Pur6Proteinuria QTL 63.30.005total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)96207227596470995Rat
61385Edpm9Estrogen-dependent pituitary mass QTL 93.430.05pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)963869687108869687Rat
731171Glom6Glomerulus QTL 62.80.0003kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)964573531109573531Rat
1354626Bvd1Brain ventricular dilatation QTL 13.730.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)975712843111552878Rat
1581517Bp284Blood pressure QTL 284arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)97665062976771824Rat
4889852Pur26Proteinuria QTL 26150.001total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)977813894101597663Rat
7794784Mcs31Mammary carcinoma susceptibility QTL 312.98mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)977813894111552878Rat
2303178Bp334Blood pressure QTL 3343.70.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)97927151191616855Rat
2303178Bp334Blood pressure QTL 3343.70.01arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)97927151191616855Rat
2303178Bp334Blood pressure QTL 3343.70.01arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)97927151191616855Rat
724547Cm21Cardiac mass QTL 212.7heart mass (VT:0007028)calculated heart weight (CMO:0000073)979271511102910209Rat
4889943Bss90Bone structure and strength QTL 904.1tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)98636963192058970Rat
1582203Gluco19Glucose level QTL 193.30.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)992491589100929786Rat
1354645Swd1Spike wave discharge measurement QTL 13.910.00012brain electrophysiology trait (VT:0010557)mean duration of a single type I spike-and-wave discharge train (CMO:0002064)9101597509102302863Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Bvd1

RGD Curation Notes
Note Type Note Reference
qtl_cross_type backcrosstoH-Tx/Hcj  
qtl_gene Homology mapping to human shows that three potential candidate genes for this QTL in human are ST8SIA IV (CMP-N-acetylneuraminate-poly-alpha-2,8-sialyl transferase), TWSG1 (twisted gastrulation), and TGIF (5'-TG-3' interacting factor; a homeobox transcription factor). 1302890
qtl_general Majority of animals with hydrocephalus were homozygous HH for chromosome 9. 1302890
qtl_map This QTL is located at the telomeric end of chromosome 9. 1302890
qtl_statistics_details Confidence interval for this QTL is 41 cM. 1302890