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Gene: Itm2c (integral membrane protein 2C) Rattus norvegicus
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Symbol: Itm2c
Name: integral membrane protein 2C
Description: Predicted to have ATP binding activity and amyloid-beta binding activity. Predicted to be involved in generation of neurons; negative regulation of amyloid precursor protein biosynthetic process; and positive regulation of extrinsic apoptotic signaling pathway. Predicted to localize to several cellular components, including the Golgi apparatus; lysosome; and perinuclear region of cytoplasm. Orthologous to human ITM2C (integral membrane protein 2C); INTERACTS WITH all-trans-retinoic acid; amphetamine; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: integral membrane protein 3; LOC301575; MGC94903
Orthologs:
Homo sapiens (human) : ITM2C (integral membrane protein 2C)  HGNC  Alliance
Mus musculus (house mouse) : Itm2c (integral membrane protein 2C)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Itm2c (integral membrane protein 2C)
Pan paniscus (bonobo/pygmy chimpanzee) : ITM2C (integral membrane protein 2C)
Canis lupus familiaris (dog) : ITM2C (integral membrane protein 2C)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Itm2c (integral membrane protein 2C)
Sus scrofa (pig) : ITM2C (integral membrane protein 2C)
Chlorocebus sabaeus (African green monkey) : ITM2C (integral membrane protein 2C)
Heterocephalus glaber (naked mole-rat) : Itm2c (integral membrane protein 2C)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0992,916,469 - 92,930,306 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl992,916,469 - 92,930,279 (+)Ensembl
Rnor_5.0992,645,770 - 92,659,607 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4984,611,756 - 84,625,391 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1984,795,174 - 84,808,783 (+)NCBI
Celera983,967,245 - 83,980,873 (+)NCBICelera
Cytogenetic Map9q35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Itm2c
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309503
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.