LOC102554475 (uncharacterized LOC102554475) - Rat Genome Database

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Gene: LOC102554475 (uncharacterized LOC102554475) Rattus norvegicus
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Symbol: LOC102554475
Name: uncharacterized LOC102554475
RGD ID: 7737812
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8997,350,194 - 97,368,162 (+)NCBIGRCr8
mRatBN7.2989,901,821 - 89,920,445 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.0996,452,088 - 96,469,974 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0996,156,339 - 96,174,191 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera987,456,247 - 87,474,082 (+)NCBICelera
Cytogenetic Map9q35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in LOC102554475
72 total Variants

1 to 10 of 19 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
631656Bp108Blood pressure QTL 1085.970.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94859825193598251Rat
8662828Vetf6Vascular elastic tissue fragility QTL 63.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)93696235992058970Rat
11353957Bmd92Bone mineral density QTL 920.01tibia mineral mass (VT:1000283)volumetric bone mineral density (CMO:0001553)94611419991114199Rat
724515Uae16Urinary albumin excretion QTL 168urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)958163035100929646Rat
731171Glom6Glomerulus QTL 62.80.0003kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)964573531109573531Rat
724547Cm21Cardiac mass QTL 212.7heart mass (VT:0007028)calculated heart weight (CMO:0000073)979271511102910209Rat
61385Edpm9Estrogen-dependent pituitary mass QTL 93.430.05pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)963869687108869687Rat
2303178Bp334Blood pressure QTL 3343.70.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)97927151191616855Rat
724544Uae9Urinary albumin excretion QTL 94.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)925268044114175309Rat
2290450Scl57Serum cholesterol level QTL 574.15blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)93696235995410867Rat

1 to 10 of 19 rows






RefSeq Acc Id: XR_357196
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8997,350,194 - 97,368,162 (+)NCBI
mRatBN7.2989,901,821 - 89,920,445 (+)NCBI
Rnor_6.0996,452,088 - 96,469,974 (+)NCBI
Rnor_5.0996,156,339 - 96,174,191 (+)NCBI
Sequence:


Database
Acc Id
Source(s)
BioCyc Gene G2FUF-26773 BioCyc
NCBI Gene LOC102554475 ENTREZGENE
PhenoGen LOC102554475 PhenoGen
RNAcentral URS0000CCFAAD RNACentral
  URS0000CD0607 RNACentral


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-12-18 LOC102554475  uncharacterized LOC102554475      Symbol and Name status set to provisional 70820 PROVISIONAL