Cm21 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Cm21 (Cardiac mass QTL 21) Rattus norvegicus

Symbol: Cm21
Name: Cardiac mass QTL 21
RGD ID: 724547
Also known as: Hw6; Heart weight QTL 6
Trait: heart mass   (VT:0007028)    
Measurement Type: calculated heart weight   (CMO:0000073)    
LOD Score: 2.7
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2979,271,511 - 102,910,209RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0983,686,153 - 111,609,081RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0983,451,810 - 111,224,462RGDRnor5.0
RGSC_v3.4977,170,797 - 105,580,061RGDRGSC3.4
RGSC_v3.1977,354,082 - 105,789,541RGD
Cross Type: intercross
Strains Crossed: SS/JrTol SHR/NHsd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Vertebrate Trait
heart mass  (IDA)

Rat Strain
SHR/NHsd  (IEA)
SS/JrTol  (IEA)

References

References - curated
1. Garrett MR, etal., J Am Soc Nephrol 2003 May;14(5):1175-87.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
61806Ecel1endothelin converting enzyme-like 198781443487829154Rat
3646Ccl20C-C motif chemokine ligand 2098438903184391629Rat
619975Hdac1lhistone deacetylase 1-like98045313980454593Rat
61801Htr2b5-hydroxytryptamine receptor 2B98673579386756640Rat
70552Acsl3acyl-CoA synthetase long-chain family member 398014099680164636Rat
61829Ptmaprothymosin alpha98717625187180333Rat
61853Gpc1glypican 199339623493424047Rat
61945Per2period circadian regulator 299200728992049551Rat
3252Pampeptidylglycine alpha-amidating monooxygenase99799858198271966Rat
3619SagS-antigen visual arrestin98846779788508821Rat
2914Inpp5dinositol polyphosphate-5-phosphatase D98828768088392748Rat
2073Agxtalanine--glyoxylate and serine--pyruvate aminotransferase99367538493685337Rat
70984BokBCL2 family apoptosis regulator BOK99422349394234476Rat
620056Septin2septin 299401814194051386Rat
3748Serpine2serpin family E member 298112474681188866Rat
2352Chrndcholinergic receptor nicotinic delta subunit98786241787870833Rat
2354Chrngcholinergic receptor nicotinic gamma subunit98787808587884193Rat
2922Irs1insulin receptor substrate 198355296483605797Rat
620949Ugt1a6UDP glucuronosyltransferase family 1 member A698874722988808465Rat
708431Slco6c1solute carrier organic anion transporter family, member 6c199750002897580776Rat
619979Hdac4histone deacetylase 499250346792750164Rat
708474Ugt1a8UDP glucuronosyltransferase family 1 member A898872709488808465Rat
621286Twist2twist family bHLH transcription factor 299237474092419222Rat
620601Ackr3atypical chemokine receptor 399079968290811246Rat
620219Sh3bp4SH3-domain binding protein 498966015689739163Rat
708488Spp2secreted phosphoprotein 298900685889026676Rat
620128IlkapILK associated serine/threonine phosphatase99196644091988791Rat
620950Ugt1a7cUDP glucuronosyltransferase 1 family, polypeptide A7C98873957788808465Rat
621661Kcnj13potassium inwardly-rectifying channel, subfamily J, member 1398806300388071112Rat
621669Psmd1proteasome 26S subunit, non-ATPase 198670971486785213Rat
619867Nmur1neuromedin U receptor 198703323187038070Rat
727968Ndufa10NADH:ubiquinone oxidoreductase subunit A1099300703493041825Rat
1303210Farsbphenylalanyl-tRNA synthetase subunit beta97988785279947082Rat
620962Hdlbphigh density lipoprotein binding protein99394809994018040Rat
3153Nclnucleolin98699958887008112Rat
621845St8sia4ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 499599415096084617Rat
3626Scg2secretogranin II98080307480808646Rat
71085Col4a3collagen type IV alpha 3 chain98387595884004955Rat
69354Capn10calpain 1099349813293510494Rat
3164Neu2neuraminidase 298821849488267356Rat
620762Trpm8transient receptor potential cation channel, subfamily M, member 898889703988990167Rat
620431Pax3paired box 397956745579664042Rat
61870Ramp1receptor activity modifying protein 199176548191816152Rat
1305846HjurpHolliday junction recognition protein98885337988867730Rat
1306918Cops7bCOP9 signalosome subunit 7B98723813287263967Rat
620850Nppcnatriuretic peptide C98732005187324251Rat
1305615Armc9armadillo repeat containing 998680279186928860Rat
1306390Cab39calcium binding protein 3998646300886524545Rat
1304996Kif1akinesin family member 1A99356303393647412Rat
1306607Trip12thyroid hormone receptor interactor 1298591669186043312Rat
1307449Gin1gypsy retrotransposon integrase 199829359698315155Rat
1306355Sp140SP140 nuclear body protein98622447286274724Rat
1306204Pde6dphosphodiesterase 6D98719299187237926Rat
1307976D2hgdhD-2-hydroxyglutarate dehydrogenase99435055594368384Rat
1309973Fam174afamily with sequence similarity 174, member A99574281595761083Rat
708465Otosotospiralin99321694893220614Rat
1307608Ube2fubiquitin-conjugating enzyme E2F (putative)99184595491881145Rat
2099Alpialkaline phosphatase, intestinal98777341187776877Rat
620391Efna5ephrin A59102316753102595480Rat
727833Ugt1a9-psUDP glycosyltransferase 1 family, polypeptide A9, pseudogene98871318488714042Rat
1308003Farp2FERM, ARH/RhoGEF and pleckstrin domain protein 299405365094162212Rat
1307790Eif4e2eukaryotic translation initiation factor 4E family member 298788607887901058Rat
1305996Wdfy1WD repeat and FYVE domain containing 198103485281092823Rat
3935Ugt1a1UDP glucuronosyltransferase family 1 member A198880134488808465Rat
727809Stk25serine/threonine kinase 2599416183494174095Rat
1306477Rhbdd1rhomboid domain containing 198363003783748690Rat
620278Slco6b1solute carrier organic anion transporter family member 6B199726665597347336Rat
1308624Neu4neuraminidase 499439692094402576Rat
1310173Sp110SP110 nuclear body protein98620050386225355Rat
1333294Olr1346olfactory receptor 134699311732893118299Rat
1302987Ano7anoctamin 799391752493945323Rat
1333345Olr1347olfactory receptor 134799313148393132454Rat
1333489Olr1350olfactory receptor 135099314957393150544Rat
1309556Mrpl44mitochondrial ribosomal protein L4498110665881111709Rat
1359385Dnerdelta/notch-like EGF repeat containing98558698585902820Rat
1309773Fbxl17F-box and leucine-rich repeat protein 179102780573103206755Rat
621866Gbx2gastrulation brain homeobox 299050963390512212Rat
1310830Csprscomponent of Sp100-rs98616578386174596Rat
1310850Asb18ankyrin repeat and SOCS box-containing 1899053135090595953Rat
621650Akp3alkaline phosphatase 3, intestine, not Mn requiring98780474987807866Rat
1311644Mogat1monoacylglycerol O-acyltransferase 197998096379988513Rat
1311772Ap1s3adaptor related protein complex 1 subunit sigma 398095040281039685Rat
1359388Slco6d1solute carrier organic anion transporter family, member 6d199758309397739994Rat
1310760Asb1ankyrin repeat and SOCS box-containing 199212033292140790Rat
1312047Hes6hes family bHLH transcription factor 699200183892003580Rat
1333615Olr1349olfactory receptor 134999313663293146531Rat
1307908Ing5inhibitor of growth family, member 599432691994344220Rat
1311658Pdcd1programmed cell death 199441878694431945Rat
1311447Snorcsecondary ossification center associated regulator of chondrocyte maturation98814041988145891Rat
1549771Ugt1a9UDP glucuronosyltransferase family 1 member A998869698188808465Rat
1310631Atg16l1autophagy related 16-like 198842073788457530Rat
1310902Nudt12nudix hydrolase 1299874162798755039Rat
1309252Traf3ip1TRAF3 interacting protein 199207362292110427Rat
1309055Ngefneuronal guanine nucleotide exchange factor98814695688244454Rat
1308169Ppp1r7protein phosphatase 1, regulatory subunit 799388606893909991Rat
1311413Slc19a3solute carrier family 19 member 398427572284299368Rat
1309404Gpr35G protein-coupled receptor 3599352669193539302Rat
1309613Usp40ubiquitin specific peptidase 4098860792088678940Rat
1309614Dtymkdeoxythymidylate kinase99431555294324386Rat
1308190Cul3cullin 398159264181670428Rat
1305311Iqca1IQ motif containing with AAA domain 199062673590742563Rat
1308164Spata3spermatogenesis associated 398666035286672272Rat
1308704Col6a3collagen type VI alpha 3 chain99136157891439434Rat
1309819Chchd2coiled-coil-helix-coiled-coil-helix domain containing 299450043994501110Rat
1310230Mffmitochondrial fission factor98400779884036039Rat
1309244Agap1ArfGAP with GTPase domain, ankyrin repeat and PH domain 199003976090475196Rat
1309503Itm2cintegral membrane protein 2C98654592786559745Rat
1306139Rnf11l2ring finger protein 11-like 298218177982183568Rat
1311404Cops8COP9 signalosome subunit 899120742791217258Rat
1305355Col4a4collagen type IV alpha 4 chain98383317383875436Rat
1310580B3gnt7UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 798695622086960171Rat
1309664Atg4bautophagy related 4B, cysteine peptidase99428241794314109Rat
1309675Slc16a14solute carrier family 16, member 1498611006686137546Rat
1306146PaskPAS domain containing serine/threonine kinase99384427593886036Rat
1307870Fbxo36F-box protein 3698604252286107220Rat
1309644Klhl30kelch-like family member 3099194244391952756Rat
1565739Sgpp2sphingosine-1-phosphate phosphatase 297976265879884665Rat
1561436Daw1dynein assembly factor with WD repeats 198443555284472632Rat
1561963Dock10dedicator of cytokinesis 1098184359982101540Rat
1561755RGD1561755similar to Signal Recognition Particle Alu Rna Binding Heterodimer, Srp91498664582986649077Rat
1562440Mterf4mitochondrial transcription termination factor 499383416293838838Rat
1563955Prss56serine protease 5698784280687859978Rat
1563309Dgkddiacylglycerol kinase, delta98851668688607349Rat
1562432Espnlespin-like99191204991935292Rat
1566037RGD1566037similar to Ribosomal protein SA98091006880912886Rat
1563917RGD1563917similar to Nuclear autoantigen Sp-100 (Speckled 100 kDa)98638177786405385Rat
1565687Mroh2amaestro heat-like repeat family member 2A98881451588862346Rat
1563692Mab21l4mab-21 like 499369045593701267Rat
1560041Agfg1ArfGAP with FG repeats 198412487884178149Rat
1333070Olr1352olfactory receptor 135299317336093174328Rat
1564730RGD1564730similar to ribosomal protein L3699281561392816212Rat
1303048Slco4c1solute carrier organic anion transporter family, member 4C199718016297229135Rat
1302957Kcne4potassium voltage-gated channel subfamily E regulatory subunit 498024342980251533Rat
1560925RGD1560925similar to 2610034M16Rik protein99859122298717920Rat
1332746Olr1343olfactory receptor 134399304847593049413Rat
1359473Thap4THAP domain containing 499424258194282312Rat
1333848Olr1353olfactory receptor 135399318459493194689Rat
1334135Olr1342-psolfactory receptor pseudogene 134298505117685051964Rat
1334141Olr1345olfactory receptor 134599307003193070969Rat
1549741Ugt1a2UDP glucuronosyltransferase 1 family, polypeptide A298879121688808465Rat
1559955RGD1559955similar to 40S ribosomal protein S1799909327299093890Rat
1549728Ugt1a3UDP glycosyltransferase 1 family, polypeptide A398878032888808465Rat
1310733Mlphmelanophilin99150741091542984Rat
1311951SphkapSPHK1 interactor, AKAP domain containing98450938384657582Rat
1333485Olr1351olfactory receptor 135199316024893161207Rat
628634Prlhprolactin releasing hormone99154312891549022Rat
1562136Macirmacrophage immunometabolism regulator99842076098440818Rat
1559828Gpr55G protein-coupled receptor 5598658490686640601Rat
1334214Olr1344olfactory receptor 134499305674093057675Rat
1333005Olr1348-psolfactory receptor pseudogene 134899313324693133449Rat
1560168Dis3l2DIS3-like 3'-5' exoribonuclease 298735540987736616Rat
1560766Pid1phosphotyrosine interaction domain containing 198528433585503035Rat
1359548Lrrfip1LRR binding FLII interacting protein 199159203291720250Rat
1359550Sp100SP100 nuclear antigen98631099086377036Rat
1559565Efhd1EF-hand domain family, member D198793825987984917Rat
1562478Rab17RAB17, member RAS oncogene family99155292491566759Rat
1583637Rpl21-ps1ribosomal protein L21, pseudogene 198763513387635684Rat
1566074Rbm44RNA binding motif protein 4499173115391756783Rat
1566079Sned1sushi, nidogen and EGF-like domains 199377408793834003Rat
1565945RGD1565945similar to ribosomal protein S1098642216286422790Rat
1564629Tex44testis expressed 4498707568487077102Rat
1562727Aqp12aaquaporin 12A99355452793560011Rat
1565100Alpgalkaline phosphatase, germ cell98774872187761500Rat
1359514Sclyselenocysteine lyase99189026991910947Rat
1593854Gal3st2galactose-3-O-sulfotransferase 299438245694387990Rat
1590765Ppip5k2diphosphoinositol pentakisphosphate kinase 299831528098394537Rat
1593789LOC685468similar to nucleolar complex associated 3 homolog99461937094650913Rat
1588633Tm4sf20transmembrane 4 L six family member 2098403871584052615Rat
1589682LOC367322similar to tumor protein, translationally-controlled 199787450697875077Rat
1589685Arl4cADP ribosylation factor like GTPase 4C98930033589303770Rat
1592977LOC680352similar to peptidylprolyl isomerase D98889168288893091Rat
1584688Erfeerythroferrone99195697191964846Rat
1589866Fam124bfamily with sequence similarity 124 member B98151494781533869Rat
1585470LOC686129similar to bone morphogenetic protein receptor, type 1A9100602229100605006Rat
1583689Ugt1a5UDP glucuronosyltransferase family 1 member A598876225088808465Rat
1598338LOC301604similar to Pyruvate kinase isozyme M299182347291834122Rat
1595220Dusp28dual specificity phosphatase 2899347249293474207Rat
1595229Ankmy1ankyrin repeat and MYND domain containing 199342366493476651Rat
1592616LOC685532hypothetical protein LOC68553299489069494892294Rat
1595210Rnpepl1arginyl aminopeptidase like 199347660093486331Rat
1590183LOC685785similar to solute carrier organic anion transporter family, member 6c199740938897461111Rat
1594329Ugt1a4-psUDP glycosyltransferase 1 family, polypeptide A4, pseudogene98877258788773555Rat
1596701Cops9COP9 signalosome subunit 999320984393214774Rat
1594215Dnajb3DnaJ heat shock protein family (Hsp40) member B398879554288796555Rat
1592668Scand3-ps1SCAN domain containing 3, pseudogene 199450062994501122Rat
1592645LOC685502similar to zinc finger protein 20799471618294759721Rat
2318569LOC100362216hypothetical protein LOC10036221698669176786699920Rat
2318130Gigyf2GRB10 interacting GYF protein 298800121288127040Rat
2322949LOC100363496hypothetical LOC10036349698759060687591465Rat
2324563LOC100362040Ac2-143-like99405057794092832Rat
2325055Alppalkaline phosphatase, placental98776584687768606Rat
6490130LOC100911876protein SET-like99452574394574248Rat
6488392LOC100912214uncharacterized LOC10091221499199437591996238Rat
6499336LOC100910317elongation factor 1-alpha 1-like98086618480867575Rat
6498359LOC100910493ras-related protein Rab-18-like98178454981786163Rat
7514331LOC102551819U3 small nucleolar RNA-associated protein 14 homolog B-like98012062280129166Rat
7513527LOC102548291uncharacterized LOC10254829199216421992167303Rat
7663504LOC102554789uncharacterized LOC10255478999059597190640971Rat
7663763Rps27a-ps9ribosomal protein S27a, pseudogene 999242577992426321Rat
7656325LOC102549694protein NYNRIN-like99387646993885044Rat
7595527LOC102550706uncharacterized LOC10255070698611970286126905Rat
7610058LOC102553020uncharacterized LOC10255302099722913997261503Rat
7570114LOC102553709uncharacterized LOC10255370998344640383484732Rat
7570937LOC102546692uncharacterized LOC1025466929102664654102668053Rat
7593803LOC102555145uncharacterized LOC10255514599097464190981811Rat
7548599LOC102554430uncharacterized LOC10255443098977724089781278Rat
7553846LOC102554187uncharacterized LOC10255418798906466489104187Rat
7705608LOC102555030uncharacterized LOC10255503099084553190856417Rat
7706814LOC102547942uncharacterized LOC10254794299188056691890075Rat
7727178LOC102552654uncharacterized LOC10255265499640731196442600Rat
7690483LOC102548542uncharacterized LOC10254854298689060086956019Rat
7737812LOC102554475uncharacterized LOC10255447598990182189920445Rat
7714518LOC102548729uncharacterized LOC10254872998709320987102973Rat
7740505LOC102547414zinc finger protein 120-like99546270695463751Rat
7716002LOC102546629uncharacterized LOC1025466299102666911102677582Rat
7728635LOC102556490uncharacterized LOC1025564909102279478102295083Rat
7728853Crocc2ciliary rootlet coiled-coil, rootletin family member 299370878693769617Rat
9102062LOC103690569uncharacterized LOC10369056998946099289469978Rat
9112007LOC103690574ubiquitin-associated domain-containing protein 1 pseudogene99384071293842719Rat
9197887LOC103690566ice-structuring glycoprotein-like98405615984056734Rat
9171458Nyap2neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 298240679782658250Rat
9384454LOC10369058740S ribosomal protein S25 pseudogene99565867595659046Rat
9334462LOC103690562uncharacterized LOC10369056298640947386421040Rat
9346176LOC103690559uncharacterized LOC10369055997939681379426093Rat
9448552LOC103690581tubulin alpha-1B chain pseudogene9102869196102876650Rat
9685085Mir149microRNA 14999341438993414477Rat
11362438LOC108352035uncharacterized LOC10835203599893282698940487Rat
11449647LOC108352031glyceraldehyde-3-phosphate dehydrogenase pseudogene98336527983366295Rat
11455030LOC108351956RING finger protein 223-like97968147879684988Rat
11405256LOC108351976uncharacterized LOC10835197699885796198904468Rat
11406805LOC10835203040S ribosomal protein S2 pseudogene98111517781116076Rat
11417562LOC108352034uncharacterized LOC10835203499421687394217837Rat
11424261LOC108352033glyceraldehyde-3-phosphate dehydrogenase-like98952514989526174Rat
11410190LOC108351974uncharacterized LOC10835197499281772392865423Rat
11476313LOC10835200460S ribosomal protein L30-like98426224084265380Rat
11502495LOC108351978uncharacterized LOC10835197899844709698454842Rat
11512085LOC108351971uncharacterized LOC10835197198890685488909792Rat
11517988LOC108351970uncharacterized LOC10835197098874889788759048Rat
41138001LOC120094734uncharacterized LOC12009473498709647687113703Rat
41275851LOC120094738uncharacterized LOC12009473898931119889324968Rat
41139248LOC120094737uncharacterized LOC12009473798828213688287642Rat
41207194LOC120094759uncharacterized LOC1200947599102487656102498261Rat
41281036LOC120094755uncharacterized LOC1200947559100320816100337741Rat
41118077LOC120094722uncharacterized LOC12009472298404353984047154Rat
41173954LOC120094725uncharacterized LOC12009472598568638485693986Rat
41329502LOC120094860U6 spliceosomal RNA98792549287925595Rat
41363602LOC120094871U6 spliceosomal RNA98779243687792530Rat
41096162NEWGENE_40933816transfer RNA valine (anticodon AAC)98801670588016779Rat
41119897LOC120094730uncharacterized LOC12009473098664897086663626Rat
41176099LOC120094749uncharacterized LOC12009474999369094793696037Rat
41331248LOC120094919small nucleolar RNA SNORA1798517594485176070Rat
41178953LOC120094949small nucleolar RNA U1398719052987190633Rat
41153847LOC120094885small nucleolar RNA SNORD2098700106887001147Rat
41266143LOC1200949515S ribosomal RNA99415679494156912Rat
41266300LOC120094731uncharacterized LOC12009473198668501986707213Rat
41266326LOC120094719uncharacterized LOC12009471998316197583182540Rat
41395183LOC120094750uncharacterized LOC12009475099581984395825054Rat
41155597LOC120094739uncharacterized LOC12009473998932522289345530Rat
41192800LOC120094723uncharacterized LOC12009472398407402184082651Rat
41288558LOC120094808uncharacterized LOC12009480899025367190301267Rat
41289198LOC120094894U1 spliceosomal RNA98656550586565670Rat
41348918LOC120094939small nucleolar RNA SNORA1799542152095421616Rat
41104869LOC120094896small Cajal body-specific RNA 698845058488450846Rat
41128648LOC120094585glyceraldehyde-3-phosphate dehydrogenase-like99735703597358357Rat
41229829LOC120094897small Cajal body-specific RNA 698844206588442334Rat
41293215LOC120094986U6 spliceosomal RNA99390673393906836Rat
41106528LOC120094724uncharacterized LOC12009472498501268385038789Rat
41107223LOC120094741uncharacterized LOC12009474199098204990996757Rat
41132162LOC120094985U6 spliceosomal RNA99208750692087608Rat
41200243LOC120094728uncharacterized LOC12009472898644420386453311Rat
41232573LOC120094807uncharacterized LOC12009480799023271790241118Rat
41275197LOC120094718cytochrome c, somatic-like98107866181092612Rat
41320137LOC120094925small nucleolar RNA SNORA1799712804597128175Rat
41133306LOC120094756uncharacterized LOC1200947569100416164100553687Rat
41202132LOC120094979U6 spliceosomal RNA99930440999304515Rat
41233501LOC120094751uncharacterized LOC12009475199591321895960037Rat
40996703LOC120094748uncharacterized LOC12009474899354109493549241Rat
40972669LOC120094890small nucleolar RNA SNORA4499260122092601359Rat
40949588LOC120094729uncharacterized LOC12009472998652439486545913Rat
40949615LOC120094936small nucleolar RNA SNORA1798087056180870674Rat
40973822LOC120094851uncharacterized LOC12009485197937539879380326Rat
40974776LOC120094745uncharacterized LOC12009474599238718892400105Rat
40952464LOC120094975U6 spliceosomal RNA97975781579757917Rat
41012887LOC120094746signal peptidase complex subunit 3-like99303549493038160Rat
41013737LOC120094881small nucleolar RNA SNORA7598700024887000384Rat
40954341LOC120094865U6 spliceosomal RNA99351284493512931Rat
40978519LOC120094757uncharacterized LOC1200947579101577047101591773Rat
40957244LOC120094727uncharacterized LOC12009472798613731486139788Rat
40983173LOC120094852uncharacterized LOC12009485298924012989242768Rat
40940351LOC120094883small nucleolar RNA SNORD8298700451587004586Rat
40940829NEWGENE_40933816transfer RNA valine (anticodon AAC)98721626887216349Rat
40965981LOC120094809uncharacterized LOC12009480999398578693989762Rat
40967038LOC120094742uncharacterized LOC12009474299096632090990369Rat
40992437LOC120094726uncharacterized LOC12009472698608361486085120Rat
40944180LOC120094914small nucleolar RNA SNORA1798899178588991916Rat
40970647LOC120094732uncharacterized LOC12009473298687081486874105Rat
41023977LOC120094584CXXC motif containing zinc binding protein-like99657454496583661Rat
41025224LOC120094736uncharacterized LOC12009473698718430287194314Rat
41245914LOC120094752uncharacterized LOC12009475299620883596229501Rat
41246614LOC120094950U1 spliceosomal RNA9100241673100241835Rat
41051343LOC120094586potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like99799691297998894Rat
41055286NEWGENE_40926764transfer RNA proline (anticodon AGG)98693189386931965Rat
41056788LOC120094980U6 spliceosomal RNA98978862789788730Rat
41317148LOC120094747uncharacterized LOC12009474799342929193434280Rat
41299434LOC120094720uncharacterized LOC12009472098370011483711914Rat
41225257LOC120094740uncharacterized LOC12009474098956540589590849Rat
41300199LOC120094721uncharacterized LOC12009472198382906283863252Rat
41035686LOC120094743uncharacterized LOC12009474399102931191033418Rat
41302765LOC120094754uncharacterized LOC12009475499951165699522408Rat
41334814LOC120094758uncharacterized LOC1200947589101690445101717311Rat
41038481LOC120094744uncharacterized LOC12009474499183820391840876Rat
41236287LOC120094926small nucleolar RNA SNORA1799894837498948498Rat
41305354LOC120094760uncharacterized LOC1200947609102742646102748788Rat
41018300LOC120094733uncharacterized LOC12009473398694832786954272Rat
41018431NEWGENE_6576114transfer RNA threonine (anticodon AGU)98033471680334790Rat
41019106LOC120094853uncharacterized LOC12009485398975472689756973Rat
41069405LOC120094753uncharacterized LOC12009475399636047096409723Rat
41309199LOC120094735uncharacterized LOC12009473598713565287154677Rat
41021246NEWGENE_40926764transfer RNA proline (anticodon AGG)99839748698397567Rat
41241510LOC120094717uncharacterized LOC12009471798064940180677567Rat
41022835LOC120094905U1 spliceosomal RNA97935164579351807Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10359D9Got10923298788122287881453Ratregion
10965D9Arb525798700863587008898Ratregion
34088D9Mgh211098636963186369743Ratregion
33688D9Mit717598920003589200212Ratregion
36009D9Rat5414998131436481314513Ratregion
36027D9Rat31349100929646100929786Ratregion
37216D9Rat6720998838794388388152Ratregion
37312D9Rat10010199465802494658115Ratregion
36803D9Rat5015099355248293552632Ratregion
36838D9Rat5116698451486184515030Ratregion
36908D9Rat414899205881192058970Ratregion
37002D9Rat5312898119923881199366Ratregion
37052D9Rat615798850705588507212Ratregion
37190D9Rat9921998921570589215924Ratregion
37724D9Rat8420998519398285194188Ratregion
37932D9Rat6820798907535889075565Ratregion
35691D9Rat510898707346887073594Ratregion
39654D9Rat11123098910172889101958Ratregion
39658D9Rat14220198988242189882624Ratregion
39970D9Rat14110099154551291545612Ratregion
38036D9Rat6420199249158992491790Ratregion
38270D9Rat9720199109075891090963Ratregion
38388D9Rat7424198369287683693117Ratregion
40510D9Rat1091509101597509101597663Ratregion
40584D9Rat1531299101016130101016265Ratregion
40080D9Rat14412798385153183851658Ratregion
38902D9Rat8324599294927192949515Ratregion
39384D9Rat14523498329093383291164Ratregion
42896D9Rat16822998698659586986825Ratregion
42362D9Rat18623498259800082598227Ratregion
42363D9Rat18723198526960585269815Ratregion
41600D9Rat11017499541071195410867Ratregion
41672D9Rat1632329102302629102302863Ratregion
44638D9Got9425197941223679412487Ratregion
44644D9Got9112597984257979842704Ratregion
44646D9Got9314598104993281050077Ratregion
44647D9Got10826398697266986972940Ratregion
44648D9Got10720798617469286174899Ratregion
44649D9Wox216298778709587787267Ratregion
44650D9Got10617298608030486080475Ratregion
44653D9Got11413898972242989722567Ratregion
44654D9Got11116799071994690720113Ratregion
44656D9Got11212299142450391424625Ratregion
44657D9Got11617099279342392793590Ratregion
44658D9Got11916499352575193525915Ratregion
44659D9Got11522899340536993405597Ratregion
44660D9Got12018499581054095810719Ratregion
44661D9Got12129699413659594136891Ratregion
44662D9Got11818799511644195116628Ratregion
44663D9Got12221999439383294394051Ratregion
44665D9Got12518099787255897872738Ratregion
60644D9Got10028498256128282561565Ratregion
60645D9Got10127299235666392356935Ratregion
60648D9Got10419597951306679513258Ratregion
625807D9Got11025698925897489259230Ratregion
61287D9Uia625797927151179271759Ratregion
66548D9Uia514698627799986278145Ratregion
67303D9Arb428299099946990999751Ratregion
1630368D9Kyo214498941444189414585Ratregion
1630391D9Got22921898225052082250738Ratregion
1631961D9Ulb125498312954483129798Ratregion
1632142D9Got2182769102402586102402860Ratregion
1627000D9Mco1528798878671888787007Ratregion
1629733D9Wox3321098080922980809441Ratregion
1638663D9Got24225098952728589527535Ratregion
1638754D9Got24025998952728589527572Ratregion
1638983D9Got23623198831784988318080Ratregion
1639198D9Got24412299363833293638454Ratregion
1639583D9Wox2998850165388501685Ratregion
1639583D9Wox2998850156488501966Ratregion
1639583D9Wox2998850156488501685Ratregion
1640795D9Got20724599573685795737102Ratregion
1640929D9Got24618498267316982673353Ratregion
1641780D9Wox2722898788130487881532Ratregion
1632892D9Wox3998780764487807855Ratregion
1633278D9Wox4019998878675588786956Ratregion
1640606D9Got23414898861979988619947Ratregion
1635653D9Wox1213398394073883940871Ratregion
1635697D9Wox2511698360565083605766Ratregion
1635700D9Wox2620498360243583602639Ratregion
1634068D9Got21218998347586583476054Ratregion
1634189D9Got22525598229104582291298Ratregion
1634430D9Got2261559100571078100571233Ratregion
1634430D9Got2261559100570902100571233Ratregion
1634643D9Got20615998229032682290487Ratregion
2302873D9Mco9323999161661491616855Ratregion
2302889D9Mco9228099139542391395703Ratregion
2302897D9Mco9022598016827780168502Ratregion
2302915D9Mco9422999228248492282715Ratregion
2302943D9Mco9120098067632180676524Ratregion
2302949D9Mco8925097983367679833926Ratregion
7193002D2995111199356583993565950Ratregion
5035937PMC312758P18398700806487008147Ratregion
5035991PMC55360P119498700791987008113Ratregion
5039232RH12758820598717099987171204Ratregion
5039302RH12762820498403893884039142Ratregion
5036484Scg294098080381480804754Ratregion
5036695AU04890028198147040581470686Ratregion
5036941AU04969516598184004781840212Ratregion
5036999AU04987018999352574493525933Ratregion
5035673WI-159861039102316796102316899Ratregion
5033955RH14075115498621444786214601Ratregion
5025970RH13040018098564183985642019Ratregion
5026076RH13081718799465053794650724Ratregion
5026076RH13081718799465053794650724Ratregion
7205754stSG614592098037584380376623Ratregion
7205754stSG614592098037582580376623Ratregion
720577201.MMHAP9FLA1.seq22099797785897978078Ratregion
7206136Irs18198354973883549819Ratregion
5031560AU04792221898002882880029046Ratregion
5034211RH14178821299376929493769505Ratregion
5026332RH13180119198803264588032836Ratregion
5034386RH656581489102780940102781088Ratregion
5034462BE11865615099598895495989104Ratregion
5026596RH13281718098973890589739085Ratregion
5029073RH14341510499834717398347277Ratregion
5029261RH14412511798636660086366717Ratregion
5029361RH14450528499434534994345633Ratregion
5029539AI00907918199394820993948390Ratregion
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5035088D15S12725698090647680906732Ratregion
5035152BQ19586320699369052093690726Ratregion
5029571BE09567018699339800993398195Ratregion
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5027097SHGC-3616410798016444680164553Ratregion
5027191AW48793711598025041380250528Ratregion
5027193AB0151368598439121184391296Ratregion
5027195AI6426979699383386793833963Ratregion
5034902AI22774918299181900691819188Ratregion
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5032715RH13503319299347263793472829Ratregion
5032725RH13507120698111148481111690Ratregion
5032855RH13673612298683483586834957Ratregion
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5033317RH1383941319102907594102907725Ratregion
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5030661BI3016991619102823620102823781Ratregion
5030661BI3016991619102823576102823781Ratregion
5030691BE10760817699168914391689319Ratregion
5025538RH12871119599384263393842828Ratregion
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5025752RH12952619299434603494346226Ratregion
5028378AA96051218698652432186524507Ratregion
5028380AI43001016499351007393510237Ratregion
5033695RH13977322098591902685919246Ratregion
5054925RH14350312599041740490417529Ratregion
5055017RH14355815498418074284180896Ratregion
5055033RH14356711598886225288862367Ratregion
5051224RH13451119499383000893830202Ratregion
5051308AV12953110798791277187912878Ratregion
5051310U795238999827136398271452Ratregion
5053627RH14275810799434463494344741Ratregion
5055989RH14411916698781976187819927Ratregion
5056041RH14414911099812457498124684Ratregion
5056077RH14416910399806165498061757Ratregion
5056165RH14422129899799561797995915Ratregion
5052083RH9483020098880814088808341Ratregion
5057414AA99772119799081088890811085Ratregion
5054687RH14336719298104100681041198Ratregion
5059424AW53070118399391477893914961Ratregion
5059476AW52448718199203520392035384Ratregion
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5058662BE10228416398417862084178783Ratregion
5056189RH14423510198632925186329352Ratregion
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5056739RH14455210798830439588304502Ratregion
505216501.MMHAP90FLA1.seq15599143142991431584Ratregion
5052347X5935814997956929879569447Ratregion
5055319RH14373325398531833685318589Ratregion
5058926BF38725615499196673891966892Ratregion
5058932BF38727817499188090891881082Ratregion
5059748BE10314215999399612293996281Ratregion
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5058272BF38691219899416049994160697Ratregion
5058302BF38699216998705811587058284Ratregion
5052241D2995110499356582693565930Ratregion
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5053425RH14264111199412733594127446Ratregion
5059368BG37774814599258654992586694Ratregion
5057726BE10142215799829372998293886Ratregion
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5053621RH14275415497964771179647865Ratregion
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5052603RH12588431199362775293628063Ratregion
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5050292RH1339722009102318729102318865Ratregion
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5053181RH1425001679102673956102674123Ratregion
5050854RH13429618699369103293691218Ratregion
5041722RH12902119698361521683615412Ratregion
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5041032RH12862420999416200894162217Ratregion
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5044172RH13045118099844053998440719Ratregion
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5044724RH13076718098879559988795779Ratregion
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5045138RH13100620598375186983752074Ratregion
5046160RH13159318298678418586784367Ratregion
5048956RH13320319199210993392110124Ratregion
5045674RH13131319798591672885916926Ratregion
5047834RH13255520398669970786699910Ratregion
5048996RH13322621998690843786908656Ratregion
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5049322RH13341421399431383594314048Ratregion
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5048124RH13272218499085602490856208Ratregion
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5049732RH13365018298839255988392741Ratregion
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5048400RH13288220998012492280125131Ratregion
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5043164RH12986822099121696491217184Ratregion
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Position Markers

Flank 1: (D9Uia6)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2979,271,511 - 79,271,759 (+)MAPPER
Rnor_6.0983,686,153 - 83,686,404NCBI
Rnor_5.0983,451,810 - 83,452,061UniSTS
RGSC_v3.4977,170,797 - 77,171,049RGD
RGSC_v3.4977,170,798 - 77,171,049UniSTS
RGSC_v3.1977,354,082 - 77,354,334RGD
Celera976,786,573 - 76,786,824UniSTS
Cytogenetic Map9 RGD
Peak: (D9Rat97)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2991,090,758 - 91,090,963 (+)MAPPER
Rnor_6.0997,647,515 - 97,647,719NCBI
Rnor_5.0997,338,034 - 97,338,238UniSTS
Celera988,638,830 - 88,639,034UniSTS
FHH x ACI Map962.18RGD
FHH x ACI Map962.18UniSTS
Flank 2: (D9Mco6)
Rat AssemblyChrPosition (strand)Source
RGSC_v3.49105,579,863 - 105,580,061UniSTS
RGSC_v3.49105,579,863 - 105,580,061RGD
RGSC_v3.19105,789,343 - 105,789,541RGD
Cytogenetic Map9 RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10054125Srcrt7Stress Responsive Cort QTL 73.330.0011blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)9187073594Rat
70186Niddm26Non-insulin dependent diabetes mellitus QTL 263.87blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)92207116986369743Rat
7207814Bmd91Bone mineral density QTL 913.5femur size trait (VT:1000369)femoral neck cross-sectional area (CMO:0001697)92375414483851531Rat
70218Cm28Cardiac mass QTL 288.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)92526804479271759Rat
724544Uae9Urinary albumin excretion QTL 94.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)925268044114175309Rat
731164Uae25Urinary albumin excretion QTL 253.50.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)925661188100929786Rat
8662828Vetf6Vascular elastic tissue fragility QTL 63.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)93696235992058970Rat
2290450Scl57Serum cholesterol level QTL 574.15blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)93696235995410867Rat
6903941Pur31Proteinuria QTL 310.036total urine protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)94019418885194188Rat
11353949Bp393Blood pressure QTL 393arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94019418885194188Rat
61352Bp34Blood pressure QTL 345arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94249534379271511Rat
10058949Gmadr5Adrenal mass QTL 520.014adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)94279151387976209Rat
11353951Bp394Blood pressure QTL 394arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94464992189649921Rat
12879506Pur33Proteinuria QTL 33total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)94464992189649921Rat
11353957Bmd92Bone mineral density QTL 920.01tibia mineral mass (VT:1000283)volumetric bone mineral density (CMO:0001553)94611419991114199Rat
631656Bp108Blood pressure QTL 1085.970.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94859825193598251Rat
1578760Cm53Cardiac mass QTL 533.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)956771635101771635Rat
724515Uae16Urinary albumin excretion QTL 168urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)958163035100929646Rat
1300134Bp185Blood pressure QTL 1853.73arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)961381434104821652Rat
1581580Uae34Urinary albumin excretion QTL 34urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)96207227596470995Rat
1578757Pur6Proteinuria QTL 63.30.005total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)96207227596470995Rat
61385Edpm9Estrogen-dependent pituitary mass QTL 93.430.05pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)963869687108869687Rat
731171Glom6Glomerulus QTL 62.80.0003kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)964573531109573531Rat
1354626Bvd1Brain ventricular dilatation QTL 13.730.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)975712843111552878Rat
4889852Pur26Proteinuria QTL 26150.001total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)977813894101597663Rat
7794784Mcs31Mammary carcinoma susceptibility QTL 312.98mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)977813894111552878Rat
2303178Bp334Blood pressure QTL 3343.70.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)97927151191616855Rat
2303178Bp334Blood pressure QTL 3343.70.01arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)97927151191616855Rat
2303178Bp334Blood pressure QTL 3343.70.01arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)97927151191616855Rat
724547Cm21Cardiac mass QTL 212.7heart mass (VT:0007028)calculated heart weight (CMO:0000073)979271511102910209Rat
4889943Bss90Bone structure and strength QTL 904.1tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)98636963192058970Rat
1582203Gluco19Glucose level QTL 193.30.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)992491589100929786Rat
1354645Swd1Spike wave discharge measurement QTL 13.910.00012brain electrophysiology trait (VT:0010557)mean duration of a single type I spike-and-wave discharge train (CMO:0002064)9101597509102302863Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Cm21


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2004-09-08 Cm21  Cardiac mass QTL 21  Hw6  Heart weight QTL 6  Symbol and Name updated 1299863 APPROVED

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general SS allele suggestively associated with increased heart weight 634617