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ONTOLOGY REPORT - ANNOTATIONS

Term:tight junction assembly
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Accession:GO:0120192 term browser browse the term
Definition:A cellular process that results in the aggregation, arrangement and bonding together of a set of components to form a tight junction. A tight junction seals cells together in an epithelium in a way that prevents even small molecules from leaking from one side of the sheet to the other.
Synonyms:exact_synonym: occluding cell junction assembly;   occluding junction assembly


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tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actg1 actin, gamma 1 involved_in ISO
IEA		 (PMID:22855531)
GO_REF:0000107		 RGD
Ensembl		 PMID:22855531 GO_REF:0000107 NCBI chr10:106,118,106...106,120,951 JBrowse link
G Actg1l1 actin, gamma 1 like 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:93,434,045...93,435,969 JBrowse link
G Cdc45 cell division cycle 45 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr11:95,689,702...95,714,980 JBrowse link
G Cldn11 claudin 11 involved_in ISO
IEA		 (PMID:30734065)
GO_REF:0000107		 RGD
Ensembl		 PMID:30734065 GO_REF:0000107 NCBI chr 2:114,136,234...114,149,539 JBrowse link
G Cldn12 claudin 12 NOT|involved_in ISO (PMID:31511021) RGD PMID:31511021 NCBI chr 4:29,477,468...29,488,465 JBrowse link
G Cldn18 claudin 18 involved_in ISO (PMID:22079592) RGD PMID:22079592 NCBI chr 8:109,125,819...109,145,110 JBrowse link
G Cldn5 claudin 5 involved_in ISO (PMID:30734065) RGD PMID:30734065 NCBI chr11:95,717,172...95,718,598 JBrowse link
G Dsg3 desmoglein 3 involved_in ISO (PMID:31835537) RGD PMID:31835537 NCBI chr18:12,074,321...12,105,954 JBrowse link
G Ephb2 Eph receptor B2 IDA RGD PMID:33722292 RGD:127285641 NCBI chr 5:154,179,065...154,360,459 JBrowse link
G Mpdz multiple PDZ domain crumbs cell polarity complex component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:100,812,121...100,966,566 JBrowse link
G Patj PATJ, crumbs cell polarity complex component involved_in ISO
IBA
ISS		 (PMID:15738264)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:15738264 GO_REF:0000024 GO_REF:0000033 NCBI chr 5:118,177,557...118,480,301 JBrowse link
bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn4 actinin alpha 4 involved_in ISO (PMID:18332111) RGD PMID:18332111 NCBI chr 1:93,310,294...93,379,369 JBrowse link
G Afdn afadin, adherens junction formation factor involved_in ISO (PMID:27815408) RGD PMID:27815408 NCBI chr 1:58,041,065...58,170,505 JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type NOT|involved_in ISO (PMID:17403930) RGD PMID:17403930 NCBI chr10:54,361,898...54,373,776 JBrowse link
G Aloxe3 arachidonate epidermal lipoxygenase 3 NOT|involved_in ISO (PMID:22832496) RGD PMID:22832496 NCBI chr10:54,329,224...54,353,167 JBrowse link
G Arl2 ARF like GTPase 2 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:212,863,422...212,875,425 JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within ISO MGI:2389020 (PMID:15775979) RGD PMID:15775979 NCBI chr19:51,402,178...51,471,572 JBrowse link
G Cdh5 cadherin 5 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr19:821,875...860,931 JBrowse link
G Cgn cingulin acts_upstream_of_or_within ISO (PMID:24385485) RGD PMID:24385485 NCBI chr 2:184,997,425...185,024,785 JBrowse link
G Cldn1 claudin 1 involved_in ISO
IBA		 (PMID:25849148), (PMID:26607202)
GO_REF:0000033		 RGD
GO_Central		 PMID:25849148 PMID:26607202 GO_REF:0000033 NCBI chr11:87,926,376...87,941,533 JBrowse link
G Cldn10 claudin 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:102,269,858...102,361,589 JBrowse link
G Cldn11 claudin 11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:114,136,234...114,149,539 JBrowse link
G Cldn14 claudin 14 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:46,701,940...46,799,049 JBrowse link
G Cldn15 claudin 15 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:25,334,849...25,345,104 JBrowse link
G Cldn16 claudin 16 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:87,795,106...87,814,396 JBrowse link
G Cldn17 claudin 17 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:41,313,675...41,314,851 JBrowse link
G Cldn18 claudin 18 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:109,125,819...109,145,110 JBrowse link
G Cldn19 claudin 19 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:138,148,234...138,155,672 JBrowse link
G Cldn2 claudin 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:108,248,383...108,258,847 JBrowse link
G Cldn20 claudin 20 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:46,539,039...46,539,698 JBrowse link
G Cldn22 claudin 22 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:51,155,058...51,156,084 JBrowse link
G Cldn24 claudin 24 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:51,157,524...51,158,186 JBrowse link
G Cldn25 claudin 25 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:58,288,411...58,289,145 JBrowse link
G Cldn3 claudin 3 involved_in IBA
ISO		 GO_REF:0000033
(PMID:20655293), (PMID:25849148)		 GO_Central
RGD		 PMID:20655293 PMID:25849148 GO_REF:0000033 NCBI chr12:27,345,075...27,346,547 JBrowse link
G Cldn34a claudin 34A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:25,164,586...25,233,074 JBrowse link
G Cldn34b claudin 34B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:44,396,219...44,402,241 JBrowse link
G Cldn34b4 claudin 34B4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:44,329,083...44,362,148 JBrowse link
G Cldn34c4 claudin 34C4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:94,391,092...94,396,766 JBrowse link
G Cldn34d claudin 34D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:44,473,389...44,481,870 JBrowse link
G Cldn34e claudin 34E involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:45,620,496...45,627,344 JBrowse link
G Cldn4 claudin 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:27,388,160...27,389,958 JBrowse link
G Cldn5 claudin 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:95,717,172...95,718,598 JBrowse link
G Cldn6 claudin 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:13,213,837...13,218,578 JBrowse link
G Cldn7 claudin 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:55,188,670...55,190,871 JBrowse link
G Cldn8 claudin 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:41,362,081...41,364,330 JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISO (PMID:8636221) RGD PMID:8636221 NCBI chr 8:129,517,576...129,544,661 JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in ISO
IEA		 (PMID:17332497)
GO_REF:0000107		 RGD
Ensembl		 PMID:17332497 GO_REF:0000107 NCBI chr11:82,416,853...82,607,797 JBrowse link
G Ect2 epithelial cell transforming 2 involved_in ISO (PMID:15254234) RGD PMID:15254234 NCBI chr 2:111,904,522...111,966,786 JBrowse link
G Esam endothelial cell adhesion molecule involved_in ISO (PMID:26607202) RGD PMID:26607202 NCBI chr 8:45,426,985...45,437,976 JBrowse link
G Frmpd2 FERM and PDZ domain containing 2 involved_in ISO (PMID:19706687) RGD PMID:19706687 NCBI chr16:8,763,889...8,883,558 JBrowse link
G Grhl2 grainyhead-like transcription factor 2 involved_in ISO (PMID:25152456) RGD PMID:25152456 NCBI chr 7:70,280,360...70,415,277 JBrowse link
G Itgb1 integrin subunit beta 1 IMP RGD PMID:18579774 RGD:2325293 NCBI chr19:73,602,277...73,650,271 JBrowse link
G Marveld2 MARVEL domain containing 2 involved_in ISO (PMID:20164257), (PMID:23073616) RGD PMID:20164257 PMID:23073616 NCBI chr 2:33,474,750...33,498,225 JBrowse link
G Marveld3 MARVEL domain containing 3 involved_in ISO (PMID:20164257) RGD PMID:20164257 NCBI chr19:54,818,180...54,832,871 JBrowse link
G Micall2 MICAL-like 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:18094055)		 UniProt
RGD		 PMID:18094055 GO_REF:0000024 NCBI chr12:20,013,037...20,041,795 JBrowse link
G Mpp7 MAGUK p55 scaffold protein 7 involved_in ISO
IEA		 (PMID:17332497)
GO_REF:0000107		 RGD
Ensembl		 PMID:17332497 GO_REF:0000107 NCBI chr17:60,135,096...60,401,814 JBrowse link
G Mtdh metadherin IEP RGD PMID:15383321 RGD:1359738 NCBI chr 7:67,192,592...67,250,819 JBrowse link
G Ocel1 occludin/ELL domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:18,076,428...18,079,068 JBrowse link
G Ocln occludin involved_in ISO
IBA		 (PMID:20164257), (PMID:26607202)
GO_REF:0000033		 RGD
GO_Central		 PMID:20164257 PMID:26607202 GO_REF:0000033 NCBI chr 2:33,391,303...33,442,207 JBrowse link
G Pak2 p21 (RAC1) activated kinase 2 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr11:82,212,896...82,273,803 JBrowse link
G Pard3 par-3 family cell polarity regulator involved_in IMP PMID:18082612 UniProt PMID:18082612 RGD:8553352 NCBI chr19:71,977,420...72,527,273 JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:27336173)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:27336173 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:122,469,223...122,524,993 JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 involved_in ISO
IEA		 (PMID:26607202)
GO_REF:0000107		 RGD
Ensembl		 PMID:26607202 GO_REF:0000107 NCBI chr10:92,090,263...92,152,002 JBrowse link
G Pof1b POF1B, actin binding protein involved_in ISO
IBA		 (PMID:21940798)
GO_REF:0000033		 RGD
GO_Central		 PMID:21940798 GO_REF:0000033 NCBI chr  X:81,875,348...81,942,046 JBrowse link
G Rab13 RAB13, member RAS oncogene family involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:12058051), (PMID:15096524)		 UniProt
Ensembl
RGD		 PMID:12058051 PMID:15096524 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:177,972,535...177,977,679 JBrowse link
G Ramp2 receptor activity modifying protein 2 involved_in ISO
ISS		 (PMID:18097473)
GO_REF:0000024		 RGD
UniProt		 PMID:18097473 GO_REF:0000024 NCBI chr10:86,689,148...86,690,956 JBrowse link
G Samt1 spermatogenesis associated multipass transmembrane protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:26,362,766...26,427,634 JBrowse link
G Samt2 spermatogenesis associated multipass transmembrane protein 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:26,845,413...26,898,389 JBrowse link
G Samt2l1 spermatogenesis associated multipass transmembrane protein 2 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:25,930,744...25,933,712 JBrowse link
G Samt2l2 spermatogenesis associated multipass transmembrane protein 2 like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:25,873,151...25,876,071 JBrowse link
G Samt2l3 spermatogenesis associated multipass transmembrane protein 2 like 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:25,294,178...25,299,103 JBrowse link
G Samt3 spermatogenesis associated multipass transmembrane protein 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:54,522,644...54,525,478 JBrowse link
G Samt4 spermatogenesis associated multipass transmembrane protein 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:26,173,282...26,176,055 JBrowse link
G Slc39a9 solute carrier family 39, member 9 involved_in IMP
IDA		 PMID:27164415
PMID:35625396		 UniProt PMID:27164415 PMID:35625396 RGD:155663545, RGD:155663535 NCBI chr 6:106,022,858...106,061,734 JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:2445832|MGI:3522206 (PMID:20047077) RGD PMID:20047077 NCBI chr 9:21,924,050...21,933,338 JBrowse link
G Tbcd tubulin folding cofactor D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:107,215,626...107,372,398 JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:8636221) RGD PMID:8636221 NCBI chr 1:128,260,330...128,505,018 JBrowse link
G Wnt11 Wnt family member 11 acts_upstream_of_or_within ISO MGI:2665014 (PMID:17767158) RGD PMID:17767158 NCBI chr 1:162,545,660...162,565,456 JBrowse link
negative regulation of bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta involved_in ISO
IEA		 (PMID:25816133)
GO_REF:0000107		 RGD
Ensembl		 PMID:25816133 GO_REF:0000107 NCBI chr16:76,021,968...76,075,717 JBrowse link
G Mir105 microRNA 105 acts_upstream_of ISO (PMID:24735924) RGD PMID:24735924 NCBI chr  X:155,480,841...155,480,913 JBrowse link
G Mir142 microRNA 142 involved_in ISO (PMID:27277258) RGD PMID:27277258 NCBI chr10:73,055,104...73,055,190 JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:O75116 (PMID:25816133)		 Ensembl
RGD		 PMID:25816133 GO_REF:0000107 NCBI chr18:1,387,360...1,509,218 JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:Q13464 (PMID:25816133)		 Ensembl
RGD		 PMID:25816133 GO_REF:0000107 NCBI chr 6:45,407,823...45,502,773 JBrowse link
G Rps6 ribosomal protein S6 IDA RGD PMID:25217631 RGD:11041641 NCBI chr 5:106,417,680...106,420,540 JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:25816133) RGD PMID:25816133 NCBI chr20:3,626,685...3,629,303 JBrowse link
positive regulation of bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvrl1 activin A receptor like type 1 involved_in ISO UniProtKB:Q9UK05 (PMID:32561494) RGD PMID:32561494 NCBI chr 7:134,117,917...134,135,306 JBrowse link
G Cdc45 cell division cycle 45 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr11:95,689,702...95,714,980 JBrowse link
G Cldn1 claudin 1 IMP RGD PMID:22684624 RGD:11341733 NCBI chr11:87,926,376...87,941,533 JBrowse link
G Cldn5 claudin 5 involved_in ISO (PMID:25323998) RGD PMID:25323998 NCBI chr11:95,717,172...95,718,598 JBrowse link
G Dsg3 desmoglein 3 involved_in ISO (PMID:22796473) RGD PMID:22796473 NCBI chr18:12,074,321...12,105,954 JBrowse link
G Epha2 Eph receptor A2 involved_in ISO (PMID:27815408) RGD PMID:27815408 NCBI chr 5:158,888,629...158,917,100 JBrowse link
G Gcg glucagon involved_in ISO (PMID:25050009) RGD PMID:25050009 NCBI chr 3:67,522,489...67,531,533 JBrowse link
G Gdf2 growth differentiation factor 2 involved_in ISO (PMID:32561494) RGD PMID:32561494 NCBI chr16:9,261,679...9,267,678 JBrowse link
G Il17a interleukin 17A involved_in IEA
ISO		 GO_REF:0000107
(PMID:26431948)		 Ensembl
RGD		 PMID:26431948 GO_REF:0000107 NCBI chr 9:30,640,844...30,644,331 JBrowse link
G Nphp1 nephrocystin 1 involved_in ISO (PMID:19755384) RGD PMID:19755384 NCBI chr 3:135,413,927...135,469,505 JBrowse link
G Nphp4 nephrocystin 4 involved_in ISO (PMID:19755384) RGD PMID:19755384 NCBI chr 5:168,270,522...168,356,393 JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO
ISS
IEA		 (PMID:22796473)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:22796473 GO_REF:0000024 GO_REF:0000107 NCBI chr12:16,150,411...16,170,864 JBrowse link
regulation of bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F11r F11 receptor involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr13:86,406,229...86,429,819 JBrowse link
G Fzd5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3583769 (PMID:23610556)		 Ensembl
RGD		 PMID:23610556 GO_REF:0000107 NCBI chr 9:73,606,860...73,614,039 JBrowse link
G Gja1 gap junction protein, alpha 1 IMP RGD PMID:19509333 RGD:6784505 NCBI chr20:36,302,490...36,315,010 JBrowse link
G Gpbar1 G protein-coupled bile acid receptor 1 involved_in ISO (PMID:22046243) RGD PMID:22046243 NCBI chr 9:83,309,895...83,312,397 JBrowse link
G Myo1c myosin 1C involved_in ISO
IEA		 (PMID:21402783)
GO_REF:0000107		 RGD
Ensembl		 PMID:21402783 GO_REF:0000107 NCBI chr10:60,996,642...61,019,022 JBrowse link
G Nedd4l NEDD4 like E3 ubiquitin protein ligase acts_upstream_of_or_within ISO (PMID:20504882) RGD PMID:20504882 NCBI chr18:60,663,918...60,996,824 JBrowse link
G Pkp2 plakophilin 2 IMP RGD PMID:19509333 RGD:6784505 NCBI chr11:98,165,974...98,231,916 JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in ISO
IEA		 (PMID:15905176)
GO_REF:0000107		 RGD
Ensembl		 PMID:15905176 GO_REF:0000107 NCBI chr19:41,059,843...41,083,189 JBrowse link
G Prkch protein kinase C, eta involved_in ISO
ISS		 (PMID:19114660)
GO_REF:0000024		 RGD
UniProt		 PMID:19114660 GO_REF:0000024 NCBI chr 6:98,027,830...98,226,486 JBrowse link
G Snai1 snail family transcriptional repressor 1 involved_in ISO (PMID:15314165) RGD PMID:15314165 NCBI chr 3:176,667,476...176,671,965 JBrowse link
G Snai2 snail family transcriptional repressor 2 involved_in ISO (PMID:15314165) RGD PMID:15314165 NCBI chr11:99,686,934...99,690,349 JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr 1:128,260,330...128,505,018 JBrowse link
tricellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ildr1 immunoglobulin-like domain containing receptor 1 involved_in ISO (PMID:25217574) RGD PMID:25217574 NCBI chr11:77,591,146...77,624,268 JBrowse link
G Lsr lipolysis stimulated lipoprotein receptor involved_in IBA
ISO		 GO_REF:0000033
(PMID:21245199), (PMID:22671589)		 GO_Central
RGD		 PMID:21245199 PMID:22671589 GO_REF:0000033 NCBI chr 1:95,313,830...95,329,471 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20533
    cellular process 19522
      cellular component organization or biogenesis 7187
        cellular component organization 6903
          cellular component assembly 3197
            cell junction assembly 573
              cell-cell junction assembly 174
                tight junction assembly 103
                  bicellular tight junction assembly + 95
                  septate junction assembly + 0
                  tricellular tight junction assembly 2
paths to the root