Esam (endothelial cell adhesion molecule) - Rat Genome Database

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Gene: Esam (endothelial cell adhesion molecule) Rattus norvegicus
Analyze
Symbol: Esam
Name: endothelial cell adhesion molecule
RGD ID: 1303286
Description: Predicted to enable cell-cell adhesion mediator activity. Predicted to be involved in several processes, including bicellular tight junction assembly; homophilic cell adhesion via plasma membrane adhesion molecules; and regulation of actin filament polymerization. Predicted to act upstream of or within cell-cell adhesion. Predicted to be located in bicellular tight junction. Predicted to be part of protein-containing complex. Predicted to be active in adherens junction and plasma membrane. Orthologous to human ESAM (endothelial cell adhesion molecule); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; acetamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: endothelial cell-selective adhesion molecule; MGC94065
RGD Orthologs
Human
Mouse
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8845,426,985 - 45,437,976 (+)NCBIGRCr8
mRatBN7.2837,238,228 - 37,249,217 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl837,238,287 - 37,249,215 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx841,254,688 - 41,265,679 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0839,537,741 - 39,548,734 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0837,400,661 - 37,411,652 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0839,997,875 - 40,008,802 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl839,997,875 - 40,008,809 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0839,998,699 - 40,009,626 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4838,773,224 - 38,784,349 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1838,781,989 - 38,793,113 (+)NCBI
Celera837,205,957 - 37,216,885 (-)NCBICelera
Cytogenetic Map8q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
EsamRatchromosome 11 partial duplication syndrome  ISORGD:13488418554872ClinVar Annotator: match by term: Distal trisomy 11qClinVarPMID:25741868
EsamRatDwarfism  ISORGD:13488418554872ClinVar Annotator: match by term: Short statureClinVarPMID:32581362
EsamRatholoprosencephaly 11  ISORGD:13488418554872ClinVar Annotator: match by term: Holoprosencephaly 11ClinVarPMID:28492532
EsamRatJacobsen Syndrome  ISORGD:13488418554872ClinVar Annotator: match by term: Paris-Trousseau thrombocytopeniaClinVarPMID:32581362
EsamRatNEURODEVELOPMENTAL DISORDER WITH INTRACRANIAL HEMORRHAGE, SEIZURES, AND SPASTICITY  ISORGD:13488418554872ClinVar Annotator: match by term: Neurodevelopmental disorder with intracranial hemorrhage, seizures, and spasticityClinVarPMID:25741868|PMID:36996813
EsamRatschizophrenia  ISORGD:13488418554872ClinVar Annotator: match by term: SchizophreniaClinVarPMID:21681106|PMID:30208311
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
EsamRatschizophrenia  ISORGD:134884111554173CTD Direct Evidence: marker/mechanismCTDPMID:21822266
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
EsamRatNEURODEVELOPMENTAL DISORDER WITH INTRACRANIAL HEMORRHAGE, SEIZURES, AND SPASTICITY  ISORGD:13488417240710 OMIM 

1 to 20 of 87 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
EsamRat1,2-dimethylhydrazine increases expressionISORGD:155165964804641,2-Dimethylhydrazine results in increased expression of ESAM mRNACTDPMID:22206623
EsamRat17alpha-ethynylestradiol increases expressionISORGD:15516596480464Ethinyl Estradiol results in increased expression of ESAM mRNACTDPMID:17942748
EsamRat17alpha-ethynylestradiol multiple interactionsISORGD:15516596480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of ESAM mRNACTDPMID:17942748
EsamRat2,2',4,4'-Tetrabromodiphenyl ether decreases expressionISORGD:134884164804642,2',4,4'-tetrabromodiphenyl ether results in decreased expression of ESAM proteinCTDPMID:31675489
EsamRat2,3,7,8-tetrachlorodibenzodioxine increases expressionISORGD:15516596480464Tetrachlorodibenzodioxin results in increased expression of ESAM mRNACTDPMID:17942748
EsamRat2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of ESAM mRNACTDPMID:34747641
EsamRat2,3,7,8-tetrachlorodibenzodioxine affects expressionISORGD:15516596480464Tetrachlorodibenzodioxin affects the expression of ESAM mRNACTDPMID:21570461
EsamRat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISORGD:15516596480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of ESAM mRNA; [TIPARP gene mutant more ...CTDPMID:17942748|PMID:25975270
EsamRat3,3',5,5'-tetrabromobisphenol A decreases expressionISORGD:13488416480464tetrabromobisphenol A results in decreased expression of ESAM proteinCTDPMID:31675489
EsamRat4,4'-sulfonyldiphenol increases expressionISORGD:15516596480464bisphenol S results in increased expression of ESAM mRNACTDPMID:30951980
EsamRat4-hydroxyphenyl retinamide increases expressionISORGD:15516596480464Fenretinide results in increased expression of ESAM mRNACTDPMID:28973697
EsamRat5-aza-2'-deoxycytidine increases expressionISORGD:13488416480464Decitabine results in increased expression of ESAM mRNACTDPMID:21856257
EsamRat6-propyl-2-thiouracil increases expressionEXP 6480464Propylthiouracil results in increased expression of ESAM mRNACTDPMID:30047161
EsamRatacetamide increases expressionEXP 6480464acetamide results in increased expression of ESAM mRNACTDPMID:31881176
EsamRataconitine increases expressionEXP 6480464Aconitine results in increased expression of ESAM proteinCTDPMID:33236894
EsamRataflatoxin B1 decreases methylationISORGD:13488416480464Aflatoxin B1 results in decreased methylation of ESAM geneCTDPMID:27153756
EsamRatalpha-Zearalanol multiple interactionsEXP 6480464[Zeranol co-treated with perfluorooctanoic acid] results in increased expression of ESAM mRNACTDPMID:35163327
EsamRatamitrole increases expressionEXP 6480464Amitrole results in increased expression of ESAM mRNACTDPMID:30047161
EsamRatantirheumatic drug increases expressionISORGD:13488416480464Antirheumatic Agents results in increased expression of ESAM mRNACTDPMID:24449571
EsamRataristolochic acid A increases expressionISORGD:13488416480464aristolochic acid I results in increased expression of ESAM mRNACTDPMID:33212167

1 to 20 of 87 rows

Biological Process
1 to 11 of 11 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
EsamRatbicellular tight junction assembly involved_inISORGD:13488411624291 PMID:26607202RGDPMID:26607202
EsamRatbiological_process  ND 159840702/2009: no relevant rat dataRGD 
EsamRatcell adhesion involved_inIEAUniProtKB-KW:KW-01301600115GO_REF:0000043UniProtGO_REF:0000043
EsamRatcell-cell adhesion involved_inISORGD:13488411624291 PMID:20298433RGDPMID:20298433
EsamRatcell-cell adhesion acts_upstream_of_or_withinISORGD:15516591624291 PMID:11279107RGDPMID:11279107
EsamRatcell-cell adhesion involved_inIEAInterPro:IPR0427571600115GO_REF:0000002InterProGO_REF:0000002
EsamRathomophilic cell adhesion via plasma membrane adhesion molecules involved_inIBAMGI:1916774|PANTHER:PTN0028935381600115GO_REF:0000033GO_CentralGO_REF:0000033
EsamRathomophilic cell adhesion via plasma membrane adhesion molecules acts_upstream_of_or_withinISORGD:15516591624291 PMID:11847224RGDPMID:11847224
EsamRatprotein localization involved_inISORGD:13488411624291 PMID:20298433RGDPMID:20298433
EsamRatregulation of actin cytoskeleton organization involved_inISORGD:13488411624291 PMID:20298433RGDPMID:20298433
EsamRatregulation of actin filament polymerization involved_inISORGD:13488411624291 PMID:20298433RGDPMID:20298433
1 to 11 of 11 rows

Cellular Component
1 to 16 of 16 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
EsamRatadherens junction located_inISORGD:15516591624291 PMID:11279107RGDPMID:11279107
EsamRatadherens junction is_active_inIBAMGI:1916774|PANTHER:PTN0028935381600115GO_REF:0000033GO_CentralGO_REF:0000033
EsamRatadherens junction located_inIEAUniProtKB-SubCell:SL-00091600115GO_REF:0000044UniProtGO_REF:0000044
EsamRatanchoring junction located_inIEAUniProtKB-KW:KW-09651600115GO_REF:0000043UniProtGO_REF:0000043
EsamRatbicellular tight junction located_inIEAUniProtKB-SubCell:SL-02651600115GO_REF:0000044UniProtGO_REF:0000044
EsamRatbicellular tight junction located_inIEAUniProtKB-KW:KW-07961600115GO_REF:0000043UniProtGO_REF:0000043
EsamRatbicellular tight junction located_inISORGD:15516591624291 PMID:11847224RGDPMID:11847224
EsamRatcell-cell junction located_inISORGD:13488411624291 PMID:20298433RGDPMID:20298433
EsamRatmembrane located_inIEAUniProtKB-KW:KW-04721600115GO_REF:0000043UniProtGO_REF:0000043
EsamRatplasma membrane located_inISSUniProtKB:Q96AP71600115GO_REF:0000024UniProtGO_REF:0000024
EsamRatplasma membrane located_inIEAUniProtKB-KW:KW-10031600115GO_REF:0000043UniProtGO_REF:0000043
EsamRatplasma membrane located_inISORGD:15516591624291 PMID:11279107RGDPMID:11279107
EsamRatplasma membrane is_active_inIBAMGI:1916774|PANTHER:PTN002893538|UniProtKB:Q96AP71600115GO_REF:0000033GO_CentralGO_REF:0000033
EsamRatplasma membrane located_inISORGD:13488411624291 PMID:20298433, PMID:36996813RGDPMID:20298433|PMID:36996813
EsamRatplasma membrane located_inIEAUniProtKB-SubCell:SL-00391600115GO_REF:0000044UniProtGO_REF:0000044
EsamRatprotein-containing complex part_ofISORGD:13488411624291 PMID:26607202RGDPMID:26607202
1 to 16 of 16 rows

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
EsamRatcell-cell adhesion mediator activity enablesISORGD:13488411624291 PMID:20298433RGDPMID:20298433
EsamRatcell-cell adhesion mediator activity enablesIBAPANTHER:PTN002893538|UniProtKB:Q96AP71600115GO_REF:0000033GO_CentralGO_REF:0000033
EsamRatprotein binding enablesISORGD:13488411624291UniProtKB:O95832|UniProtKB:P16284|UniProtKB:P55061|UniProtKB:Q16625|UniProtKB:Q5BVD1 PMID:26607202, PMID:32296183RGDPMID:26607202|PMID:32296183


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Comprehensive gene review and curation RGD comprehensive gene curation
6. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
PMID:11279107   PMID:11847224   PMID:15489334   PMID:20298433   PMID:23376485   PMID:26607202  



Esam
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8845,426,985 - 45,437,976 (+)NCBIGRCr8
mRatBN7.2837,238,228 - 37,249,217 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl837,238,287 - 37,249,215 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx841,254,688 - 41,265,679 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0839,537,741 - 39,548,734 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0837,400,661 - 37,411,652 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0839,997,875 - 40,008,802 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl839,997,875 - 40,008,809 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0839,998,699 - 40,009,626 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4838,773,224 - 38,784,349 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1838,781,989 - 38,793,113 (+)NCBI
Celera837,205,957 - 37,216,885 (-)NCBICelera
Cytogenetic Map8q22NCBI
ESAM
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3811124,753,126 - 124,762,290 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl11124,752,583 - 124,762,290 (-)EnsemblGRCh38hg38GRCh38
GRCh3711124,623,022 - 124,632,186 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3611124,128,229 - 124,137,433 (-)NCBINCBI36Build 36hg18NCBI36
Build 3411124,128,241 - 124,137,385NCBI
Celera11121,783,196 - 121,792,400 (-)NCBICelera
Cytogenetic Map11q24.2NCBI
HuRef11120,565,472 - 120,574,614 (-)NCBIHuRef
CHM1_111124,509,116 - 124,518,320 (-)NCBICHM1_1
T2T-CHM13v2.011124,781,790 - 124,790,954 (-)NCBIT2T-CHM13v2.0
Esam
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39937,439,385 - 37,449,615 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl937,439,374 - 37,449,615 (+)EnsemblGRCm39 Ensembl
GRCm38937,528,089 - 37,538,319 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl937,528,078 - 37,538,319 (+)EnsemblGRCm38mm10GRCm38
MGSCv37937,335,674 - 37,345,904 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36937,263,004 - 37,287,987 (+)NCBIMGSCv36mm8
Celera934,745,238 - 34,755,449 (+)NCBICelera
Cytogenetic Map9A4NCBI
cM Map920.77NCBI
ESAM
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v29125,448,572 - 125,457,765 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan111126,553,459 - 126,562,632 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v011119,580,140 - 119,589,338 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.111123,495,773 - 123,504,938 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl11123,495,779 - 123,504,938 (-)Ensemblpanpan1.1panPan2
ESAM
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.159,658,920 - 9,667,134 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl59,658,937 - 9,667,141 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha59,703,800 - 9,712,017 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.059,598,546 - 9,606,762 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl59,598,562 - 9,606,762 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.159,670,739 - 9,678,936 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.059,641,129 - 9,649,324 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.059,677,654 - 9,685,860 (+)NCBIUU_Cfam_GSD_1.0
Esam
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947106,957,212 - 106,966,360 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367431,203,400 - 1,213,975 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367431,204,536 - 1,213,918 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ESAM
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl951,983,023 - 51,992,393 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1951,983,019 - 51,992,415 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2957,498,520 - 57,507,920 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ESAM
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11115,901,705 - 115,911,100 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1115,900,499 - 115,911,660 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604310,207,913 - 10,216,911 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0

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Variants in Esam
98 total Variants

Predicted Target Of
Summary Value
Count of predictions:336
Count of miRNA genes:190
Interacting mature miRNAs:221
Transcripts:ENSRNOT00000050609
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 54 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298065Scl16Serum cholesterol level QTL 163.8blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)83085640475856404Rat
1578769Uae31Urinary albumin excretion QTL 313.30.001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)830848154101699754Rat
11556286Cm81Cardiac mass QTL 810.01heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)83084815461290444Rat
1578765Klgr1Kidney lesion grade QTL 13.30.0001kidney morphology trait (VT:0002135)organ lesion measurement (CMO:0000677)830848154101699754Rat
1582222Epfw2Epididymal fat weight QTL 23.20.0005epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)83173772976737729Rat
1354627Despr14Despair related QTL 140.0056locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)8768895552688955Rat
61464Niddm11Non-insulin dependent diabetes mellitus QTL 113.10.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)83558203280582032Rat
61337Bp22Blood pressure QTL 225.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)83084815442692818Rat
1578755Pur5Proteinuria QTL 53.30.0001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)830848154101699754Rat
1300146Rf17Renal function QTL 172.9renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)82824291273242912Rat

1 to 10 of 54 rows
RH130493  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2837,249,033 - 37,249,213 (+)MAPPERmRatBN7.2
Rnor_6.0840,008,619 - 40,008,798NCBIRnor6.0
Rnor_5.0840,009,443 - 40,009,622UniSTSRnor5.0
RGSC_v3.4838,784,166 - 38,784,345UniSTSRGSC3.4
Celera837,205,961 - 37,206,140UniSTS
RH 3.4 Map8333.8UniSTS
Cytogenetic Map8q21UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000050609   ⟹   ENSRNOP00000051485
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl837,238,287 - 37,249,215 (+)Ensembl
Rnor_6.0 Ensembl839,997,875 - 40,008,796 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000083778   ⟹   ENSRNOP00000071098
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl840,001,030 - 40,008,809 (+)Ensembl
RefSeq Acc Id: NM_001004245   ⟹   NP_001004245
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8845,427,047 - 45,437,976 (+)NCBI
mRatBN7.2837,238,287 - 37,249,217 (+)NCBI
Rnor_6.0839,997,875 - 40,008,802 (+)NCBI
Rnor_5.0839,998,699 - 40,009,626 (+)NCBI
RGSC_v3.4838,773,224 - 38,784,349 (+)RGD
Celera837,205,957 - 37,216,885 (-)RGD
Sequence:
RefSeq Acc Id: XM_063265074   ⟹   XP_063121144
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8845,428,608 - 45,437,969 (+)NCBI
RefSeq Acc Id: XM_063265075   ⟹   XP_063121145
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8845,426,985 - 45,436,878 (+)NCBI
1 to 9 of 9 rows
Protein RefSeqs NP_001004245 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121144 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121145 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH79093 (Get FASTA)   NCBI Sequence Viewer  
  EDL84068 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000051485
  ENSRNOP00000051485.2
  ENSRNOP00000109876
GenBank Protein Q6AYD4 (Get FASTA)   NCBI Sequence Viewer  
1 to 9 of 9 rows
RefSeq Acc Id: NP_001004245   ⟸   NM_001004245
- Peptide Label: precursor
- UniProtKB: Q6AYD4 (UniProtKB/Swiss-Prot),   A6KRK8 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000071098   ⟸   ENSRNOT00000083778
Ensembl Acc Id: ENSRNOP00000051485   ⟸   ENSRNOT00000050609
RefSeq Acc Id: XP_063121145   ⟸   XM_063265075
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063121144   ⟸   XM_063265074
- Peptide Label: isoform X1
Ig-like   Ig-like C2-type   Ig-like V-type

Name Modeler Protein Id AA Range Protein Structure
AF-Q6AYD4-F1-model_v2 AlphaFold Q6AYD4 1-394 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13695860
Promoter ID:EPDNEW_R6385
Type:initiation region
Name:Esam_1
Description:endothelial cell adhesion molecule
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0839,997,848 - 39,997,908EPDNEW


1 to 29 of 29 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-31066 BioCyc
Ensembl Genes ENSRNOG00000033217 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000050609 ENTREZGENE
  ENSRNOT00000050609.5 UniProtKB/Swiss-Prot
  ENSRNOT00000121397 ENTREZGENE
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7123905 IMAGE-MGC_LOAD
InterPro ESAM UniProtKB/Swiss-Prot
  Ig-like_dom UniProtKB/Swiss-Prot
  Ig-like_dom_sf UniProtKB/Swiss-Prot
  Ig-like_fold UniProtKB/Swiss-Prot
  Ig_sub UniProtKB/Swiss-Prot
  Ig_sub2 UniProtKB/Swiss-Prot
  Ig_V-set UniProtKB/Swiss-Prot
KEGG Report rno:300519 UniProtKB/Swiss-Prot
MGC_CLONE MGC:94065 IMAGE-MGC_LOAD
NCBI Gene 300519 ENTREZGENE
PANTHER ENDOTHELIAL CELL-SELECTIVE ADHESION MOLECULE UniProtKB/Swiss-Prot
  PTHR44549 UniProtKB/Swiss-Prot
Pfam Ig_3 UniProtKB/Swiss-Prot
  V-set UniProtKB/Swiss-Prot
PhenoGen Esam PhenoGen
PROSITE IG_LIKE UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000033217 RatGTEx
SMART IGc2 UniProtKB/Swiss-Prot
  SM00409 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF48726 UniProtKB/Swiss-Prot
UniProt A6KRK8 ENTREZGENE, UniProtKB/TrEMBL
  ESAM_RAT UniProtKB/Swiss-Prot, ENTREZGENE
1 to 29 of 29 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2005-11-17 Esam  endothelial cell adhesion molecule      Symbol and Name status set to approved 1299863 APPROVED
2005-09-30 Esam        Symbol and Name status set to provisional 70820 PROVISIONAL