Bp22 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Bp22 (Blood pressure QTL 22) Rattus norvegicus

Symbol: Bp22
Name: Blood pressure QTL 22
RGD ID: 61337
Trait: arterial blood pressure trait   (VT:2000000)    
Measurement Type: systolic blood pressure   (CMO:0000004)    
LOD Score: 5.1
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.0833,558,660 - 46,588,570RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0833,603,024 - 45,061,597RGDRnor5.0
RGSC_v3.4832,203,394 - 45,291,808RGDRGSC3.4
RGSC_v3.1832,212,161 - 45,300,574RGD
Cross Type: intercross
Strains Crossed: BN SHR 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
hypertension  (IDA)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
BN  (IEA)
SHR  (IEA)

References

References - curated
1. Schork NJ, etal., Genome Res 1995 Sep;5(2):164-72
Related QTLs

Related QTL Description Reference
Bp35 interacts with RGD:61045
Bp39 interacts with RGD:61045


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1309837Fli1Fli-1 proto-oncogene, ETS transcription factor83354193233661111Rat
11508432LOC108351670uncharacterized LOC10835167083360784633610341Rat
9077440LOC103693037uncharacterized LOC10369303783375663433785977Rat
2583Ets1ETS proto-oncogene 1, transcription factor83375663433879625Rat
7686868LOC102552230uncharacterized LOC10255223083382857633836877Rat
7587451LOC102552355uncharacterized LOC10255235583393030433988475Rat
1587341LOC315534similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)83432647534327513Rat
9377300LOC103693053proline-rich receptor-like protein kinase PERK283456112534643617Rat
11508436LOC108351820ubiquitin-60S ribosomal protein L40 pseudogene83542289735423434Rat
2323529LOC100359711ubiquitin and ribosomal protein L40-like83549001735536545Rat
11452663LOC108351842uncharacterized LOC10835184283555267935557177Rat
1311382Kirrel3kirre like nephrin family adhesion molecule 383569252536254755Rat
9111684LOC103693038uncharacterized LOC10369303883569444435700031Rat
7523233LOC102555390uncharacterized LOC10255539083572108735723104Rat
11462392LOC108351671uncharacterized LOC10835167183614976936154207Rat
1303068St3gal4ST3 beta-galactoside alpha-2,3-sialyltransferase 483626474136314811Rat
628887Dcpsdecapping enzyme, scavenger83632199236374665Rat
1595496TirapTIR domain containing adaptor protein83638202936399625Rat
9132167LOC103693039uncharacterized LOC10369303983639859636405630Rat
1311785Foxred1FAD-dependent oxidoreductase domain containing 183640131736410589Rat
1311504SrpraSRP receptor subunit alpha83641068336416766Rat
1307173Fam118bfamily with sequence similarity 118, member B83641676936467609Rat
1311268Rpusd4RNA pseudouridine synthase D483646770636477190Rat
7686597LOC102547806uncharacterized LOC10254780683650610336535417Rat
7498142LOC102547872uncharacterized LOC10254787283658578636589785Rat
7699677LOC102547935uncharacterized LOC10254793583661039836620737Rat
11397299LOC108351821translation initiation factor IF-2-like83662506336630650Rat
708433Cdoncell adhesion associated, oncogene regulated83662575736712091Rat
7637175LOC102548010uncharacterized LOC10254801083670093436706053Rat
11474175Vsig10l2V-set and immunoglobulin domain containing 10 like 283671481636717391Rat
1597167LOC300491similar to enolase 1, alpha83673331136734437Rat
68381Ddx25DEAD-box helicase 2583674468636760720Rat
1310757Pus3pseudouridine synthase 383676087436769167Rat
1594169Hyls1HYLS1, centriolar and ciliogenesis associated83676347036772199Rat
2320100Pate2prostate and testis expressed 283677236236879228Rat
1311172Pate4prostate and testis expressed 483681500736817747Rat
2320151Pate3prostate and testis expressed 383684035936842370Rat
2319716Pate1prostate and testis expressed 183687470036876931Rat
2323120LOC100359924prostate and testis expressed N-like83690943336910664Rat
1304554RGD1304554LOC36304383701474737016116Rat
2324568LOC100361828rCG22807-like83702436337026142Rat
2318904LOC100362078prostate and testis expressed family member-like83706431337069464Rat
6484596Pate-fprostate and testis expressed protein F83708043237093082Rat
9140326LOC103693040prostate and testis expressed protein 2-like83712515337126812Rat
2323077LOC100359968rCG64165-like83720846737210078Rat
2322938LOC100360007secreted seminal-vesicle Ly-6 protein 1-like83728161237283052Rat
2322896LOC100360049rCG64165-like83734808437349694Rat
6489452LOC100912026urinary protein 3-like83744677637450363Rat
6489766LOC100911945secreted seminal-vesicle Ly-6 protein 1-like83755577237558469Rat
1590037LOC688335similar to Spleen protein 1 precursor (RSP-1)83755704537563474Rat
1591793LOC680406similar to Urinary protein 2 precursor (RUP-2)83770222937705043Rat
1560348RGD1560348similar to Heterogeneous nuclear ribonucleoprotein A1 (Helix-destabilizing protein (Topoisomerase-inhibitor suppressed)83779049137902030Rat
7695267LOC102549537uncharacterized LOC10254953783796472937998799Rat
11501301Trnaa-ugc1transfer RNA alanine (anticodon UGC) 183806145738061528Rat
2322852LOC100360095urinary protein 1-like83815068638154356Rat
9245653LOC103693041secreted seminal-vesicle Ly-6 protein 1-like83816275738208529Rat
2324268LOC100362690rCG64164-like83824020638241593Rat
11481302LOC108351672uncharacterized LOC10835167283839300538423248Rat
6487535LOC100912405urinary protein 3-like83854569638549283Rat
11508811LOC108351673uncharacterized LOC10835167383867889838718564Rat
11356749LOC108348206uncharacterized LOC10834820683868644938688359Rat
1592088LOC299524similar to heat shock protein 1, beta83891295738915149Rat
7628640LOC102551757olfactory receptor 145-like83907902839079561Rat
727947Robo4roundabout guidance receptor 483908269339093344Rat
620153Acrv1acrosomal vesicle protein 183916499139170568Rat
620545Chek1checkpoint kinase 183918116239201588Rat
7509306LOC102556325uncharacterized LOC10255632583920170039204969Rat
1565793Stt3aSTT3 oligosaccharyltransferase complex catalytic subunit A83920421839243751Rat
1309868Ei24EI24, autophagy associated transmembrane protein83925488339271238Rat
619708Fez1fasciculation and elongation protein zeta 183930512839350270Rat
11357181LOC10835167460S ribosomal protein L14 pseudogene83935598139358792Rat
1590626LOC680534similar to ribosomal protein L1483935601739356907Rat
1590611Pknox2PBX/knotted 1 homeobox 283936169839551700Rat
11378565LOC108351675uncharacterized LOC10835167583953775239544595Rat
1311364Tmem218transmembrane protein 21883968728039702722Rat
1564160Slc37a2solute carrier family 37 member 283970867839735042Rat
1305591Ccdc15coiled-coil domain containing 1583975907739830235Rat
1306811Hepacamhepatic and glial cell adhesion molecule83984826439866969Rat
6494870LOC100911068roundabout homolog 4-like83987890039891485Rat
1311018Robo3roundabout guidance receptor 383989279239923735Rat
1562840Msantd2Myb/SANT DNA binding domain containing 283995916239994279Rat
7514595LOC102549473uncharacterized LOC10254947383998917639990399Rat
1303286Esamendothelial cell adhesion molecule83999787540008802Rat
1561274Vsig2V-set and immunoglobulin domain containing 284000969140014734Rat
61833Nrgnneurogranin84001504940023193Rat
9245961LOC103693043uncharacterized LOC10369304384003409140038154Rat
11457501LOC108351844uncharacterized LOC10835184484004816040052102Rat
620154Spa17sperm autoantigenic protein 1784006695440078131Rat
1310431Siaesialic acid acetylesterase84007826940113514Rat
1305123Tbrg1transforming growth factor beta regulator 184011479240122450Rat
735137Panx3pannexin 384012637940137390Rat
9346799LOC103693044uncharacterized LOC10369304484015515440169977Rat
1593194LOC367057similar to nudix-type motif 584015926340160167Rat
11416889LOC10835182260S ribosomal protein L31 pseudogene84017478640190935Rat
1334242Olr1194olfactory receptor 119484019190240192831Rat
1332735Olr1195olfactory receptor 119584021906740219996Rat
1334306Olr1196olfactory receptor 119684025898540259917Rat
1332823Olr1197olfactory receptor 119784026283140263763Rat
1332681Olr1199olfactory receptor 119984028563740286572Rat
1333920Olr1200olfactory receptor 120084034516040346095Rat
1334188Olr1201olfactory receptor 120184038399740384929Rat
1333142Olr1202olfactory receptor 120284041070040414063Rat
1333406Olr1203olfactory receptor 120384044895240449899Rat
1334026Olr1204olfactory receptor 120484048879240489736Rat
1333678Olr1205-psolfactory receptor 1205, pseudogene84050542440506367Rat
1333121Olr1206olfactory receptor 120684052473340525659Rat
1333733Olr1207-psolfactory receptor pseudogene 120784056353440564571Rat
4145545LOC100526654heat shock protein 90kDa alpha (cytosolic), class B member 1 pseudogene84057065140572671Rat
1333838Olr1208-psolfactory receptor pseudogene 120884058307040583999Rat
1333731Olr1209-psolfactory receptor pseudogene 120984059131540592243Rat
9305073LOC103693052olfactory receptor 8B3-like84065067940652878Rat
1588456Olr1210-psolfactory receptor pseudogene Olr1210-ps84065570940656042Rat
1333632Olr1212-psolfactory receptor pseudogene 121284067994540680729Rat
1333164Olr1213olfactory receptor 121384069152140692465Rat
1333397Olr1214olfactory receptor 121484070706840708139Rat
1334241Olr1215-psolfactory receptor pseudogene 121584073265440732737Rat
9389419LOC103690374olfactory receptor 145-like84073658240737821Rat
2321135LOC100360924sorting nexin 2684074339140745579Rat
1332836Olr1217olfactory receptor 121784076492140765853Rat
7564439LOC102551050disks large homolog 5-like84083637540856385Rat
9311275LOC103693046uncharacterized LOC10369304684085894140859773Rat
11502151LOC108351678uncharacterized LOC10835167884088641340889503Rat
6494030LOC100911291uncharacterized LOC10091129184091083540913250Rat
7674986LOC102550569uncharacterized LOC10255056984091511240958924Rat
7533822LOC102550188disks large homolog 5-like84109021341150080Rat
7711549LOC102550102uncharacterized LOC10255010284115517541156437Rat
9408147LOC103690606disks large homolog 5-like84117944341185623Rat
1332662Olr1219olfactory receptor 121984124753641248489Rat
1333214Olr1220olfactory receptor 122084125245641253397Rat
6493590LOC100911359olfactory receptor 143-like84127268341273726Rat
1332714Olr1222olfactory receptor 122284128364141286388Rat
1333270Olr1223olfactory receptor 122384130263141303572Rat
1333340Olr1224-psolfactory receptor pseudogene 122484131559041316622Rat
1583232LOC685070similar to developmentally regulated GTP binding protein 184132830241328999Rat
1333819Olr1225olfactory receptor 122584133634041337323Rat
7508647LOC102557573urinary protein 3-like84139763141403526Rat
727919LOC171573spleen protein 1 precursor84144289841445722Rat
1560112RGD1560112similar to Urinary protein 2 precursor (RUP-2)84155319941554799Rat
1561250Rup2urinary protein 284165766241661223Rat
7677632LOC102552977uncharacterized LOC10255297784165885941677152Rat
9251694LOC103693047uncharacterized LOC10369304784170165441702732Rat
2322663LOC100360186PDZ domain containing 484172002441726264Rat
11404048LOC108351677uncharacterized LOC10835167784183155641853390Rat
9185110LOC103693048uncharacterized LOC10369304884184291141859546Rat
6489512LOC100912038HAUS augmin-like complex subunit 8-like84187813741889580Rat
6489852LOC100911958olfactory receptor 147-like84189862441899645Rat
7594678LOC102554388olfactory receptor 143-like84191591541925235Rat
9211187LOC103693049olfactory receptor 143-like84192475341925235Rat
9334900LOC103690392olfactory receptor 143-like84195849841968086Rat
11440283LOC108351823olfactory receptor 143-like84196749841973708Rat
1332728Olr1226olfactory receptor 122684200191242002853Rat
1333734Olr1227olfactory receptor 122784200982242010754Rat
1334183Olr1228olfactory receptor 122884201749342018434Rat
1333009Olr1229olfactory receptor 122984204639342047334Rat
1563738RGD1563738similar to Discs, large homolog 5 (Placenta and prostate DLG)84207586742171433Rat
11464516LOC108351679uncharacterized LOC10835167984207712742114983Rat
11412160LOC108351681uncharacterized LOC10835168184210747542130262Rat
7525038LOC102555114disks large homolog 5-like84212005142124783Rat
11475278LOC108351680uncharacterized LOC10835168084213929142141962Rat
9158001LOC103693051uncharacterized LOC10369305184219069242207373Rat
1560153Haus8-ps1HAUS augmin-like complex, subunit 8, pseudogene 184222667342236638Rat
1334147Olr1218olfactory receptor 121884224716942248639Rat
6487950LOC100912245olfactory receptor 143-like84226037242261354Rat
1333864Olr1237olfactory receptor 123784228465442285583Rat
1332689Olr1238olfactory receptor 123884229630342297232Rat
1333041Olr1239olfactory receptor 123984230056442302404Rat
1333265Olr1240olfactory receptor 124084230895442309886Rat
1334120Olr1241olfactory receptor 124184232281342323745Rat
1334003Olr1246olfactory receptor 124684233841042339342Rat
1333436Olr1247olfactory receptor 124784234781142348731Rat
6501973LOC100909736olfactory receptor 8B3-like84236058042361272Rat
1332874Olr1252olfactory receptor 125284236488742365819Rat
1332988Olr1253olfactory receptor 125384237632542377257Rat
1333492Olr1254olfactory receptor 125484238106542382377Rat
1333509Olr1255-psolfactory receptor pseudogene 125584238867742389620Rat
1333525Olr1256olfactory receptor 125684240918742410119Rat
1332639Olr1257olfactory receptor 125784242999342430928Rat
735145Vwa5avon Willebrand factor A domain containing 5A84244293242476417Rat
1334343Olr1258-psolfactory receptor pseudogene 125884248437442485305Rat
1334332Olr1259olfactory receptor 125984251152042512467Rat
1333403Olr1260olfactory receptor 126084254993042570509Rat
7568378LOC102549510von Willebrand factor A domain-containing protein 5A-like84256816742569920Rat
1333750Olr1263-psolfactory receptor pseudogene 126384257175842572625Rat
1332727Olr1264olfactory receptor 126484261360142614536Rat
1333722Olr1265olfactory receptor 126584265043842651391Rat
1334033Olr1266olfactory receptor 126684266363342664568Rat
1332904Olr1267-psolfactory receptor pseudogene 126784268259242683521Rat
1334293Olr1268-psolfactory receptor pseudogene 126884268895942689847Rat
1333680Olr1269-psolfactory receptor pseudogene 126984271301842713947Rat
9182238LOC103689935olfactory receptor 147-like84273704642737727Rat
631358Olr1271olfactory receptor 127184277630242780782Rat
1333447Olr1272-psolfactory receptor pseudogene 127284278685942787785Rat
1333145Olr1273olfactory receptor 127384279261842793553Rat
6500186LOC100910120olfactory receptor 8D1-like84281714142818067Rat
6499688LOC100910153olfactory receptor 149-like84283301942833954Rat
6499892LOC100910193olfactory receptor 8D1-like84283878742839713Rat
6499446LOC100910224olfactory receptor 8D1-like84284609642847025Rat
6499613LOC100910256olfactory receptor 146-like84287082442871759Rat
9347943LOC103693055olfactory receptor 8D1-like84288112142883941Rat
6498784LOC100910335olfactory receptor 146-like84288557342886508Rat
6498554LOC100910409olfactory receptor 146-like84294313842944070Rat
1333840Olr1275olfactory receptor 127584297837042979305Rat
6498766LOC100910445olfactory receptor 146-like84300645543007390Rat
6498474LOC100910509olfactory receptor 8D1-like84301786343018789Rat
6497945LOC100910548olfactory receptor 149-like84302362243024557Rat
1334310Olr1274olfactory receptor 127484304309443044026Rat
9176036LOC103693054olfactory receptor 8G1-like84305424043055175Rat
1334419Olr1298-psolfactory receptor pseudogene 129884313153843131837Rat
1333725Olr1299-psolfactory receptor pseudogene 129984314180743142614Rat
1333033Olr1300-psolfactory receptor pseudogene 130084315732343158165Rat
1334352Olr1301olfactory receptor 130184316715843167664Rat
1333329Olr1302olfactory receptor 130284319196643192910Rat
1333431Olr1303olfactory receptor 130384320831343209239Rat
1333478Olr1304olfactory receptor 130484323427343235208Rat
1333195Olr1305olfactory receptor 130584324893443249887Rat
1333668Olr1306olfactory receptor 130684328282843283766Rat
1333860Olr1307olfactory receptor 130784330362543304560Rat
1311744RGD1311744similar to RIKEN cDNA 5830475I0684331510443336357Rat
1333249Olr1308olfactory receptor 130884334897343349905Rat
1332870Olr1309olfactory receptor 130984335506043356004Rat
1334105Olr1310-psolfactory receptor pseudogene 131084337826943378464Rat
1333074Olr1311olfactory receptor 131184338217643383120Rat
1332713Olr1312-psolfactory receptor pseudogene 131284339868943399135Rat
1332827Olr1313olfactory receptor 131384340863543409570Rat
1334386Olr1314olfactory receptor 131484344261443443531Rat
1332791Olr1315olfactory receptor 131584346404543470377Rat
1588815LOC688473similar to 40S ribosomal protein S284347993243480636Rat
1333360Olr1316olfactory receptor 131684356678843567726Rat
1333872Olr1317-psolfactory receptor pseudogene 131784357904843579715Rat
1333217Olr1318olfactory receptor 131884359024843591186Rat
1333266Olr1319olfactory receptor 131984360667643607614Rat
1333918Olr1320olfactory receptor 132084362818243629120Rat
1333175Olr1321olfactory receptor 132184364466243645754Rat
2318366LOC100362319olfactory receptor Olr1323-like84366072843661666Rat
1332597Olr1323olfactory receptor 132384367595043676885Rat
1334325Olr1324-psolfactory receptor pseudogene 132484370521643705602Rat
1332881Olr1325olfactory receptor 132584372222843723151Rat
1332765Olr1326olfactory receptor 132684373354543734483Rat
1333701Olr1327olfactory receptor 132784374754843748483Rat
1332693Olr1328olfactory receptor 132884376237443764782Rat
1332698Olr1329olfactory receptor 132984378192143782853Rat
1333673Olr1330olfactory receptor 133084379529543796224Rat
1334315Olr1331olfactory receptor 133184380300843803787Rat
1333134Olr1332olfactory receptor 133284381527743816669Rat
1333373Olr1333-psolfactory receptor pseudogene 133384383512643836061Rat
9321686LOC103693061transcription initiation factor IIA subunit 2 pseudogene84384457043845241Rat
1333039Olr1334olfactory receptor 133484384805843848993Rat
1333391Olr1335olfactory receptor 133584385383343854765Rat
1333299Olr1337olfactory receptor 133784387272843873681Rat
1332974Olr1338olfactory receptor 133884390796743908914Rat
1332863Olr1339olfactory receptor 133984391947643920420Rat
1333740Olr1340olfactory receptor 134084396945943970400Rat
1562358Tmem225transmembrane protein 22584400119944003757Rat
1334385Olr1341olfactory receptor 134184404304544043983Rat
1562294Zfp202zinc finger protein 20284404758644068990Rat
621657Scn3bsodium voltage-gated channel beta subunit 384413641344159011Rat
1305443Gramd1bGRAM domain containing 1B84416063444399110Rat
9436081LOC103693059uncharacterized LOC10369305984429731844298122Rat
7547199LOC102553969uncharacterized LOC10255396984439912744428191Rat
6499464LOC100910225vomeronasal type-2 receptor 26-like84449757444506455Rat
1586123Vom2r-ps1vomeronasal 2 receptor, pseudogene 184454814044565977Rat
6489646LOC100911926vomeronasal type-2 receptor 26-like84463849544659459Rat
9402616LOC103693062vomeronasal type-2 receptor 116-like84466689244667960Rat
708569ClmpCXADR-like membrane protein84484668544975460Rat
6486292LOC100912569uncharacterized LOC10091256984497081744973144Rat
621725Hspa8heat shock protein family A (Hsp70) member 884498940144993261Rat
11496131LOC108351682uncharacterized LOC10835168284500684945007838Rat
1594555LOC300647similar to Microtubule-associated protein RP/EB family member 1 (APC-binding protein EB1) (End-binding protein 1) (EB1)84504980845052143Rat
1582930LOC688977hypothetical protein LOC68897784505249845052977Rat
1565120Bsxbrain specific homeobox84506167045065430Rat
1309108Jhyjunctional cadherin complex regulator84508406745140570Rat
1304602Crtamcytotoxic and regulatory T cell molecule84515258445216082Rat
1310357Ubash3bubiquitin associated and SH3 domain containing, B84522405345375450Rat
7594619LOC102555115uncharacterized LOC10255511584541514045418921Rat
7629132LOC102555203uncharacterized LOC10255520384541900345450990Rat
11396193LOC108351683glyceraldehyde-3-phosphate dehydrogenase pseudogene84556139345562483Rat
7521214LOC102555653uncharacterized LOC10255565384560184945621537Rat
9685088Lnc215long non-coding RNA 21584569119645809133Rat
2325389Mir100microRNA 10084574694845747027Rat
4888538Mir3596amicroRNA 3596a84575325445753367Rat
2325608Mirlet7a-2microRNA let-7a-284575326445753359Rat
2325457Mir125b1microRNA 125b-184579826045798346Rat
628754Vof16ischemia related factor vof-1684579835645800462Rat
7745341LOC102555479uncharacterized LOC10255547984579885845823695Rat
7678026LOC102555563glyceraldehyde-3-phosphate dehydrogenase-like84587426245877366Rat
7722605LOC102547107uncharacterized LOC10254710784602937946044093Rat
11424963LOC108351684uncharacterized LOC10835168484616747946177840Rat
619914Sorl1sortilin related receptor 184622807746287171Rat
11359665LOC108351685uncharacterized LOC10835168584650103346507187Rat
620775Sc5dsterol-C5-desaturase84652540646537014Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10819D8Got4319283923013039230321Ratregion
33858D8Mit414484571234445712475Ratregion
33887D8Mit315084658843746588570Ratregion
33913D8Mit1313284488810344888234Ratregion
33559D8Mit512283355866033558764Ratregion
36117D8Rat4615684421919744219353Ratregion
37580D8Rat9919684445793044458129Ratregion
37602D8Rat8222183630097836301208Ratregion
37988D8Rat10020883618183136182038Ratregion
35867D8Rat4811083438326734383393Ratregion
35899D8Rat4713383932267639322798Ratregion
38358D8Rat8315083764674937646902Ratregion
42244D8Arb613083394818533948317Ratregion
42849D8Rat21912583943842339438552Ratregion
42851D8Rat18813584527285345272975Ratregion
42349D8Rat22013883932268539322797Ratregion
42350D8Rat22113183387819733878338Ratregion
42353D8Rat23531584603309146033366Ratregion
41718D8Rat18921383684855936848765Ratregion
44390D8Got4615383920051339200665Ratregion
44391D8Got19928583926274239263026Ratregion
44393D8Got21212383920055039200805Ratregion
44393D8Got21212383920055039200672Ratregion
44394D8Got4916284016647540166636Ratregion
44395D8Got5015984350383743503995Ratregion
44395D8Got5015984344999443450152Ratregion
44396D8Got5324784565179345652039Ratregion
44397D8Got5913884651930546520069Ratregion
44397D8Got5913884651930546519442Ratregion
60628D8Got4217283957792539578095Ratregion
60630D8Got4513583812943538129566Ratregion
60630D8Got4513583807803438078165Ratregion
60633D8Got5215384521973245219881Ratregion
625769D8Got20022284530291145303132Ratregion
1582036D3Mco5516083599681935996978Ratregion
1628730D8Got34210883570739635707503Ratregion
1630033D8Cebr115983990540939905567Ratregion
1639223D8Got34911983920055739200808Ratregion
1639223D8Got34911983920055739200675Ratregion
1632937D8Got31814183932387139324011Ratregion
1636900D8Wox2783387824233878390Ratregion
1637459D8Got33428284037383340374114Ratregion
1632538D8Got33724884379344543793692Ratregion
7206030Olfr87845184041110940411559Ratregion
5036271Mapre186984505004345050911Ratregion
5036931AU04966217384532437945324551Ratregion
5035707ETS111383387941633879528Ratregion
5028715RH6945717884385432243854499Ratregion
5028715RH6945717884384855043848727Ratregion
5031602AU04778029384574054445740828Ratregion
5031626AU04769117784571293445713110Ratregion
5034219RH14181720483638419136384394Ratregion
5026312RH13172819183626488436265074Ratregion
5031700AU04744217384561514645615318Ratregion
5034412BE11747418184587647845876658Ratregion
5032165RH12599920383647697936477181Ratregion
5026768RH133454084652866246528875Ratregion
5032387AI19600015183387934933879499Ratregion
5035414AI22830915784652834146528497Ratregion
5032693RH13494721083970990239710111Ratregion
5029939BE10344015084580892145809070Ratregion
5030113BE09851021484405785744058070Ratregion
5027777RH9470117183381639433816564Ratregion
502784910.MMHAP16FRD7.seq16883568038935680556Ratregion
5033389RH13866023383360273433602966Ratregion
5033401RH13870017283387455133876047Ratregion
5025770RH12959518384522663045226812Ratregion
5028501AF0908668083670871436708793Ratregion
5051861RH9470019183387775233877942Ratregion
5054885RH14348022584498300744983231Ratregion
5051461AW0470468583674479536744879Ratregion
5051463AW55781913784497298244973118Ratregion
5053817RH14286815083385356633853715Ratregion
5056681RH14451819584616756446167758Ratregion
5054277RH14313212683920742739207552Ratregion
5057990BF38641515283364118333641334Ratregion
5058130BF38665915083624956436249713Ratregion
5059986BF39489120283572122235721423Ratregion
5060028BF40029418883582684835827035Ratregion
5052329U3199213283917061639170747Ratregion
5050164RH13389919084623199546233332Ratregion
5050528RH13410818784331575743315943Ratregion
5053999RH14297212383918148939181611Ratregion
5050296RH13397418484333131343331496Ratregion
5044210RH13047221684652544346525658Ratregion
5044246RH13049318084000861940008798Ratregion
5043812RH13024120483639897936399182Ratregion
5048766RH13309319084415878744158976Ratregion
5045188RH13103418783641431236414498Ratregion
5046200RH13161619083647686136477050Ratregion
5047680RH13246618684541522545415410Ratregion
5047730RH13249518584074569140745880Ratregion
5049750RH13366022083970243739702656Ratregion
5047292RH13224319683986511739865312Ratregion
5047408RH13231018383935757839357760Ratregion
5048456RH13291418283674485936746290Ratregion
5043016RH12978021484406758944067802Ratregion
5039736RH12787718384015990740160073Ratregion
5073840RH13766913884006611840066255Ratregion
5072394RH13682412783918143339181559Ratregion
5072622RH13695615384652836046528512Ratregion
5075258RH13849012783663081736630943Ratregion
5076894RH13944017784006702340067199Ratregion
5076962RH13947918183625435936254539Ratregion
5076040RH13894414883989226139892408Ratregion
5076268RH13907715083385356133853710Ratregion
5076304RH13909814484498306944983212Ratregion
5077156RH13959418084497482044974999Ratregion
5077346RH13970318384652931646529498Ratregion
5077864RH14000418084522406645224245Ratregion
5078622RH14045016584497483544974999Ratregion
5080106RH14138619983936122739361425Ratregion
5080232RH14146120483638206536382268Ratregion
5071682RH13522318383640335236403534Ratregion
5074144RH13784716484622814346228306Ratregion
5074540RH13807614583595815335958297Ratregion
5065050BF40559221683364142233641637Ratregion
5067188AU04790723584618418946184421Ratregion
5068018AU04739822683962832439628869Ratregion
5068042AU04738216683634917536349340Ratregion
5068362AU04719215983618522536185383Ratregion
5068712AU04697910283671208136712182Ratregion
5069995RH944089783387660433876700Ratregion
5068788AU04693124183550614535506990Ratregion
5069386AU04653318283673274736732924Ratregion
5069422AU04651119684600042346000613Ratregion
5069466AU0464798584652754846527632Ratregion
5063930BE12026618184606719646067376Ratregion
5060758BF38909513383676706136767193Ratregion
5060786BF38913620284496781744968018Ratregion
5060884BF40124618184628144046281620Ratregion
5063764AW53511415283997127639971427Ratregion
5062400BF39788315483997382639973979Ratregion
5062426BF40325621583989110639891320Ratregion
5062482BF39797117383929377339293945Ratregion
5064058BE12057420184418020044180400Ratregion
5062762AW53435515084404829044048439Ratregion
5064636BF39948015583599998336000137Ratregion
5064744BE10844318484508409045084273Ratregion
5061362BE11162220383975283039753032Ratregion
5061392BF39631613084652579546525924Ratregion
5061520BE1053879384497519544975287Ratregion
5084116AI17555818183641715036417330Ratregion
5086999AI22773415284011326640113417Ratregion
5082197BI28057117083681515936815328Ratregion
5087261AI22958115884011169340111850Ratregion
5086531BM38724020284580788245808083Ratregion
5089279AU04906128684488808644888372Ratregion
5088457AU04858118483634138636341569Ratregion
5089493AU04918829683447906934479364Ratregion
5081012RH14191319083632206536322254Ratregion
5085280AI17605610884583203545832142Ratregion
5085425BQ20143518583675202436752208Ratregion
5080964RH14188518684442836444428555Ratregion
5086831BE10595116783920742639207592Ratregion
5083761AI23058120583919025439190458Ratregion
5503970Serpinb6083471429734715208Ratregion
5505440Hyls154583676351736764061Ratregion
5505702UniSTS:48944693684366073143661666Ratregion
5505492PCU64649100683899645338997458Ratregion
5505684UniSTS:48930895184335505443356004Ratregion
5505692UniSTS:48939194584391947643920420Ratregion
5505758UniSTS:492675107184338215143383221Ratregion
5506727G4483624683969026339690508Ratregion
5507265fb36c1088383522410935224991Ratregion
5507089UniSTS:22447510284001564640015747Ratregion
5507135UniSTS:22478616083474500034745159Ratregion
5499939UniSTS:23564522084074475440744993Ratregion
5500005UniSTS:23610120484522772645227929Ratregion
5500266D11S3963E10883935009739350204Ratregion
5500083UniSTS:23663031783641076236411955Ratregion
5500344GDB:19786315083641369636413982Ratregion
5502481RH125059083993210239932817Ratregion
5500835WS29083387940633879537Ratregion
5501484D11S18609684580023545800330Ratregion
5502537RH12521018884001554240015729Ratregion
Position Markers

Flank 1: (D8Mit5)
Rat AssemblyChrPosition (strand)Source
Rnor_6.0833,558,660 - 33,558,764NCBI
Rnor_5.0833,603,024 - 33,603,128UniSTS
RGSC_v3.4832,203,394 - 32,203,499RGD
RGSC_v3.4832,203,395 - 32,203,499UniSTS
RGSC_v3.1832,212,161 - 32,212,265RGD
Celera832,299,483 - 32,299,583UniSTS
RH 3.4 Map8248.5UniSTS
RH 3.4 Map8248.5RGD
RH 2.0 Map8167.4RGD
Cytogenetic Map8q21UniSTS
Flank 2: (D8Mit3)
Rat AssemblyChrPosition (strand)Source
Rnor_6.0846,588,437 - 46,588,570NCBI
Rnor_5.0845,061,464 - 45,061,597UniSTS
RGSC_v3.4845,291,674 - 45,291,808RGD
RGSC_v3.4845,291,675 - 45,291,808UniSTS
RGSC_v3.1845,300,440 - 45,300,574RGD
Celera842,285,573 - 42,285,706UniSTS
RH 3.4 Map8410.8UniSTS
RH 3.4 Map8410.8RGD
Cytogenetic Map8 RGD


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
12880023Bw184Body weight QTL 1840.001body mass (VT:0001259)body weight (CMO:0000012)8210812847108128Rat
12880025Cm102Cardiac mass QTL 1020.044heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)8210812847108128Rat
12880028Cm103Cardiac mass QTL 1030.02heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)8210812847108128Rat
12880044Am9Aortic mass QTL 90.007aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)8210812847108128Rat
2317032Ginf2Gastrointestinal inflammation QTL 23.210.005liver integrity trait (VT:0010547)liver granuloma severity score (CMO:0002157)8736807652368076Rat
2317036Livw3Liver weight QTL 32.430.01liver mass (VT:0003402)liver weight to body weight ratio (CMO:0000633)8736807652368076Rat
2317048Ginf1Gastrointestinal inflammation QTL 13.520.005cecum mucosa thickness (VT:0010234)enterocolitis severity score (CMO:0002138)8736807652368076Rat
2301416Bp315Blood pressure QTL 3150.008arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)8873867753738677Rat
1581557Eae16Experimental allergic encephalomyelitis QTL 163.8nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)89531047119211942Rat
1354627Despr14Despair related QTL 140.0056locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)81038843955388439Rat
1354595Despr4Despair related QTL 42.160.0036locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)81038843955388439Rat
631650Stl6Serum triglyceride level QTL 640.0019blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)810938911120496129Rat
1598824Memor4Memory QTL 42.5exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)81137326757541668Rat
1357398Slep3Serum leptin concentration QTL 33.43blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)81137350945712344Rat
2302367Slep5Serum leptin concentration QTL 53.43blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)81137350945712344Rat
2317030Wbc5White blood cell count QTL 53.210.005leukocyte quantity (VT:0000217)white blood cell count (CMO:0000027)81144825156448251Rat
2317051Aia18Adjuvant induced arthritis QTL 182.42joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)81144825156448251Rat
1558646Swd5Spike wave discharge measurement QTL 53.450.00036brain electrophysiology trait (VT:0010557)brain spike-and-wave discharge frequency (CMO:0001742)81766655562666555Rat
61373Mcs4Mammary carcinoma susceptibility QTL 41.1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)82071759265717592Rat
631271Lecl1Lens clarity QTL 10.001lens clarity trait (VT:0001304)age of onset/diagnosis of cataract (CMO:0001584)82146491991140553Rat
731182Uae24Urinary albumin excretion QTL 246.4urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)821813070100873963Rat
631842Inf1Infertility severity QTL 14.10.001seminal gland mass (VT:0010524)seminal vesicle wet weight (CMO:0001603)82784149672841496Rat
1359021Bp271Blood pressure QTL 2711.8arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)82816802350708951Rat
631648Stl5Serum triglyceride level QTL 540.0003blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)82986798359908353Rat
1358892Kidm26Kidney mass QTL 263.69kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)829867983106526740Rat
1358896Bp262Blood pressure QTL 2622.89arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)829867983106526740Rat
1358907Cm40Cardiac mass QTL 401.89heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)829867983106526740Rat
2303564Gluco43Glucose level QTL 433blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)83014480075144800Rat
2303572Insul13Insulin level QTL 132blood insulin amount (VT:0001560)blood insulin level (CMO:0000349)83014480075144800Rat
724540Uae8Urinary albumin excretion QTL 85urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)83084545033558764Rat
1331804Cm30Cardiac mass QTL 303.77443heart mass (VT:0007028)heart wet weight (CMO:0000069)83091811258858224Rat
1300146Rf17Renal function QTL 172.9renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)83091811275918112Rat
8662823Vetf5Vascular elastic tissue fragility QTL 51.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)830918112107206309Rat
2302278Gluco36Glucose level QTL 364.2blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)83220198154065241Rat
724514Uae15Urinary albumin excretion QTL 152.9urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)83220198175971421Rat
1549908Neudeg1Neurodegradation QTL 15.50nervous system integrity trait (VT:0010566)logarithm of the ratio of the lesioned side motor neuron count to contralateral side motor neuron count (CMO:0001986)832888352101374135Rat
70206Alc20Alcohol consumption QTL 202drinking behavior trait (VT:0001422)ethanol intake volume to total fluid intake volume ratio (CMO:0001591)83355866044219353Rat
61337Bp22Blood pressure QTL 225.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)83355866046588570Rat
1331744Bp217Blood pressure QTL 2173.398arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)83355866062857995Rat
61353Bp35Blood pressure QTL 350.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)83355866065717592Rat
61353Bp35Blood pressure QTL 350.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)83355866065717592Rat
61353Bp35Blood pressure QTL 350.001arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)83355866065717592Rat
61353Bp35Blood pressure QTL 350.001arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)83355866065717592Rat
1359033Bp273Blood pressure QTL 273arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)83355866065717592Rat
11556286Cm81Cardiac mass QTL 810.01heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)83355866065717592Rat
2313046Bss78Bone structure and strength QTL 783.50.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)83355866089058369Rat
2313057Bss76Bone structure and strength QTL 7630.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)83355866089058369Rat
2313067Bss77Bone structure and strength QTL 773.10.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)83355866089058369Rat
2313088Bss75Bone structure and strength QTL 753.10.0001body length (VT:0001256)body length, nose to rump (CMO:0000079)83355866089058369Rat
1578765Klgr1Kidney lesion grade QTL 13.30.0001kidney morphology trait (VT:0002135)organ lesion measurement (CMO:0000677)833558660109028082Rat
1578769Uae31Urinary albumin excretion QTL 313.30.001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)833558660109028082Rat
1578755Pur5Proteinuria QTL 53.30.0001total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)833558660109028082Rat
2316950Scl66Serum cholesterol level QTL 664.1blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)833558764113580387Rat
1298065Scl16Serum cholesterol level QTL 163.8blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)83504141480041414Rat
1582222Epfw2Epididymal fat weight QTL 23.20.0005epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)83592559480925594Rat
1331838Niddm61Non-insulin dependent diabetes mellitus QTL 613.530.0004blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)839230130106506973Rat
61358Bp39Blood pressure QTL 392arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)83992790184927901Rat
61464Niddm11Non-insulin dependent diabetes mellitus QTL 113.10.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)83995802284958022Rat
737824Hcar10Hepatocarcinoma resistance QTL 102.9liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)84421919789542960Rat
1358906Bp253Blood pressure QTL 25340.0004arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)844219197100873963Rat
1554321Bmd3Bone mineral density QTL 37.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)844458129118087517Rat
1331769Rf39Renal function QTL 393.871urine output (VT:0003620)timed urine volume (CMO:0000260)84571234480003418Rat
1298079Activ2Activity QTL 29.50.000001voluntary movement trait (VT:0003491)rearing measurement (CMO:0001515)84571234490712344Rat
631216Stl9Serum triglyceride level QTL 94.710.0001blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)84571247575971259Rat
5684993Bmd84Bone mineral density QTL 844.1tibia mineral mass (VT:1000283)bone mineral content (CMO:0001554)84658843754065241Rat
70161Bp62Blood pressure QTL 622.90.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)84658843796998640Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Bp22

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general associates with the increase of salt-loaded blood pressure 61045