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Gene: Cldn11 (claudin 11) Rattus norvegicus
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Symbol: Cldn11
Name: claudin 11
Description: Predicted to have identical protein binding activity. Predicted to be involved in axon ensheathment; calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules; and spermatogenesis. Predicted to localize to several cellular components, including the basal part of cell; bicellular tight junction; and lipid droplet. Orthologous to human CLDN11 (claudin 11); PARTICIPATES IN hepatitis C pathway; INTERACTS WITH 17beta-estradiol; 6-propyl-2-thiouracil; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: claudin-11
Orthologs:
Homo sapiens (human) : CLDN11 (claudin 11)  HGNC  Alliance
Mus musculus (house mouse) : Cldn11 (claudin 11)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cldn11 (claudin 11)
Pan paniscus (bonobo/pygmy chimpanzee) : CLDN11 (claudin 11)
Canis lupus familiaris (dog) : CLDN11 (claudin 11)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cldn11 (claudin 11)
Sus scrofa (pig) : CLDN11 (claudin 11)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02115,823,541 - 115,836,846 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2115,823,538 - 115,836,846 (-)Ensembl
Rnor_5.02135,520,050 - 135,533,355 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42116,626,427 - 116,639,732 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12116,571,388 - 116,584,694 (-)NCBI
Celera2107,394,882 - 107,408,187 (-)NCBICelera
Cytogenetic Map2q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Cldn11
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 71081
Created: 2002-07-09
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.