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ONTOLOGY REPORT - ANNOTATIONS


Term:cell-cell junction assembly
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Accession:GO:0007043 term browser browse the term
Definition:The aggregation, arrangement and bonding together of a set of components to form a junction between cells.
Synonyms:exact_synonym: intercellular junction assembly


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cell-cell junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034767.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr11:88,912,599...88,972,176 JBrowse link
G Arvcf ARVCF, delta catenin family member involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:86,736,125...86,793,795
Ensembl chr11:86,736,142...86,793,791
JBrowse link
G Cdh10 cadherin 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:69,415,174...69,636,849
Ensembl chr 2:69,415,057...69,637,524
JBrowse link
G Cdh11 cadherin 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:2,391,181...2,551,245
Ensembl chr19:2,393,059...2,551,245
JBrowse link
G Cdh12 cadherin 12 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:71,310,228...72,540,063
Ensembl chr 2:72,006,099...72,540,263
JBrowse link
G Cdh18 cadherin 18 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:73,651,408...74,693,342
Ensembl chr 2:74,360,622...74,693,341
JBrowse link
G Cdh19 cadherin 19 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:32,344,954...32,469,887
Ensembl chr13:32,344,966...32,427,177
JBrowse link
G Cdh2 cadherin 2 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:6216737|PMID:26750727)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:26750727 GO_REF:0000024 GO_REF:0000107 MGI:6216737 NCBI chr18:8,146,971...8,366,037
Ensembl chr18:8,146,971...8,360,684
JBrowse link
G Cdh20 cadherin 20 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:24,630,298...24,914,463
Ensembl chr13:24,823,488...24,913,884
JBrowse link
G Cdh22 cadherin 22 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:161,574,993...161,971,102
Ensembl chr 3:161,575,631...161,917,285
JBrowse link
G Cdh24 cadherin 24 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:33,277,845...33,287,546
Ensembl chr15:33,278,713...33,285,779
JBrowse link
G Cdh5 cadherin 5 involved_in IBA
ISO
PMID:21873635
(PMID:23288152)
RGD PMID:23288152, PMID:21873635 RGD:13792537 NCBI chr19:1,025,122...1,074,333
Ensembl chr19:1,023,683...1,074,365
JBrowse link
G Cdh6 cadherin 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:63,100,723...63,246,618
Ensembl chr 2:63,101,739...63,166,509
JBrowse link
G Cdh7 cadherin 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:31,081,064...31,228,884
Ensembl chr13:31,081,804...31,231,213
JBrowse link
G Cdh8 cadherin 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:6,031,654...6,431,502
Ensembl chr19:6,046,665...6,426,216
JBrowse link
G Cdh9 cadherin 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:66,938,796...67,078,897
Ensembl chr 2:66,940,057...67,078,784
JBrowse link
G Cldn5 claudin 5 involved_in ISO (PMID:23288152) RGD PMID:23288152 NCBI chr11:86,356,292...86,357,718
Ensembl chr11:86,356,294...86,357,718
JBrowse link
G Ctnnd1 catenin delta 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:72,001,904...72,053,047
Ensembl chr 3:72,002,152...72,053,049
JBrowse link
G Ctnnd2 catenin delta 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:83,227,247...84,094,315
Ensembl chr 2:83,393,282...84,094,315
JBrowse link
G Dchs1 dachsous cadherin-related 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:170,594,981...170,629,062
Ensembl chr 1:170,594,822...170,628,915
JBrowse link
G Flcn folliculin involved_in ISS
ISO
GO_REF:0000024
(MGI:5487492|PMID:22965878)
UniProt
RGD
PMID:22965878 GO_REF:0000024 MGI:5487492 NCBI chr10:46,153,185...46,172,331
Ensembl chr10:46,153,188...46,172,309
JBrowse link
G Fscn1 fascin actin-bundling protein 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:9571235)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:9571235 GO_REF:0000024 GO_REF:0000107 NCBI chr12:13,655,459...13,668,595
Ensembl chr12:13,656,554...13,668,515
JBrowse link
G Hdac7 histone deacetylase 7 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3693627 (MGI:3692697|PMID:16873063)
Ensembl
RGD
PMID:16873063 GO_REF:0000107 MGI:3692697 NCBI chr 7:139,280,396...139,319,108
Ensembl chr 7:139,281,187...139,318,455
JBrowse link
G Heg1 heart development protein with EGF-like domains 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:70,234,248...70,322,966
Ensembl chr11:70,236,888...70,322,690
JBrowse link
G Lin7b lin-7 homolog B, crumbs cell polarity complex component NAS RGD PMID:10362251 RGD:633233 NCBI chr 1:101,358,313...101,361,439
Ensembl chr 1:101,358,396...101,360,971
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in ISO (MGI:3620334|PMID:16473946) RGD PMID:16473946 MGI:3620334 NCBI chr 7:30,003,429...30,162,095
Ensembl chr 7:30,003,429...30,162,056
JBrowse link
G Pard6b par-6 family cell polarity regulator beta involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:164,822,111...164,843,395
Ensembl chr 3:164,822,111...164,843,395
JBrowse link
G Pkp1 plakophilin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:52,705,174...52,753,089
Ensembl chr13:52,705,174...52,752,997
JBrowse link
G Pkp3 plakophilin 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:213,884,795...213,897,783
Ensembl chr 1:213,886,775...213,897,783
JBrowse link
G Pkp4 plakophilin 4 involved_in IBA
ISO
PMID:21873635
(MGI:5487492|PMID:22965878)
RGD PMID:22965878, PMID:21873635 MGI:5487492, RGD:13792537 NCBI chr 3:45,211,097...45,414,524
Ensembl chr 3:45,277,348...45,414,613
JBrowse link
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:4820667|PMID:20413591)
UniProt
RGD
PMID:20413591 GO_REF:0000024 MGI:4820667 NCBI chr12:47,698,915...47,737,902
Ensembl chr12:47,698,947...47,737,902
JBrowse link
adherens junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta involved_in ISO
IEA
(PMID:22855531)
GO_REF:0000107
RGD
Ensembl
PMID:22855531 GO_REF:0000107 NCBI chr12:13,715,843...13,718,813
Ensembl chr12:13,715,843...13,718,841
JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISO
IEA
ISS
(PMID:20086044), (PMID:20123964)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20086044 PMID:20123964 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5494340|PMID:23565059)
Ensembl
RGD
PMID:23565059 GO_REF:0000107 MGI:5494340 NCBI chr 2:206,224,015...206,274,910
Ensembl chr 2:206,224,015...206,274,079
JBrowse link
G Jam3 junctional adhesion molecule 3 involved_in ISO (PMID:19060272) RGD PMID:19060272 NCBI chr 8:28,147,110...28,208,466
Ensembl chr 8:28,147,111...28,208,466
JBrowse link
G Pak2 p21 (RAC1) activated kinase 2 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr11:72,829,407...72,865,815
Ensembl chr11:72,829,238...72,865,902
Ensembl chr11:72,829,238...72,865,902
JBrowse link
G Ramp2 receptor activity modifying protein 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3772552|PMID:18097473)
(PMID:18097473)
UniProt
RGD
PMID:18097473 GO_REF:0000024 MGI:3772552 NCBI chr10:89,166,170...89,168,962
Ensembl chr10:89,166,890...89,168,965
JBrowse link
G Smad7 SMAD family member 7 involved_in ISO
IEA
(PMID:18593713)
GO_REF:0000107
RGD
Ensembl
PMID:18593713 GO_REF:0000107 NCBI chr18:71,395,830...71,424,164
Ensembl chr18:71,395,830...71,424,157
JBrowse link
G Tbcd tubulin folding cofactor D involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:110,643,693...110,800,493
Ensembl chr10:110,643,759...110,800,493
JBrowse link
G Vcl vinculin involved_in IEA
ISO
GO_REF:0000107
(PMID:20086044)
Ensembl
RGD
PMID:20086044 GO_REF:0000107 NCBI chr15:3,455,211...3,544,738
Ensembl chr15:3,455,211...3,544,702
JBrowse link
G Zfp703 zinc finger protein 703 involved_in ISO (MGI:4940410|PMID:21317240) RGD PMID:21317240 MGI:4940410 NCBI chr16:69,237,857...69,242,028
Ensembl chr16:69,237,857...69,242,028
JBrowse link
apical junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cldn19 claudin 19 acts_upstream_of_or_within ISO MGI:3583804 (MGI:3583407|PMID:15883201) RGD PMID:15883201 MGI:3583407 NCBI chr 5:138,300,692...138,307,982
Ensembl chr 5:138,300,107...138,305,683
JBrowse link
G Ctnna1 catenin alpha 1 acts_upstream_of_or_within ISO MGI:2176173|MGI:2677796 (MGI:3619284|PMID:16543460), (MGI:5315030|PMID:22411810) RGD PMID:16543460 PMID:22411810 MGI:3619284 MGI:5315030 NCBI chr18:27,923,229...28,055,972
Ensembl chr18:27,923,572...28,055,960
JBrowse link
G Fbf1 Fas binding factor 1 involved_in ISO (PMID:18838552) RGD PMID:18838552 NCBI chr10:104,692,791...104,718,630
Ensembl chr10:104,692,755...104,718,621
JBrowse link
G Pkn2 protein kinase N2 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:4941685|PMID:20974804)
GO_REF:0000107
(PMID:20974804)
UniProt
RGD
Ensembl
PMID:20974804 GO_REF:0000024 GO_REF:0000107 MGI:4941685 NCBI chr 2:248,735,699...248,840,735
Ensembl chr 2:248,735,699...248,840,735
JBrowse link
G Rhoa ras homolog family member A involved_in ISS
ISO
GO_REF:0000024
(MGI:4941685|PMID:20974804)
(PMID:20974804)
UniProt
RGD
PMID:20974804 GO_REF:0000024 MGI:4941685 NCBI chr 8:117,082,440...117,116,244
Ensembl chr 8:117,106,576...117,116,167
JBrowse link
G Rhoc ras homolog family member C involved_in ISO (PMID:20974804)
(MGI:4941685|PMID:20974804)
RGD PMID:20974804 MGI:4941685 NCBI chr 2:207,271,692...207,278,010
Ensembl chr 2:207,271,853...207,279,314
JBrowse link
G Vcl vinculin involved_in ISO
IEA
(PMID:9700171)
GO_REF:0000107
RGD
Ensembl
PMID:9700171 GO_REF:0000107 NCBI chr15:3,455,211...3,544,738
Ensembl chr15:3,455,211...3,544,702
JBrowse link
G Wdr1 WD repeat domain 1 involved_in ISO (PMID:25792565) RGD PMID:25792565 NCBI chr14:76,990,014...77,023,739
Ensembl chr14:76,989,919...77,023,726
JBrowse link
bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07024637.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr16:9,772,688...9,847,444 JBrowse link
G AABR07037477.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:21,944,613...21,945,305 JBrowse link
G AABR07037590.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:24,629,306...24,629,998 JBrowse link
G Actn4 actinin alpha 4 involved_in ISO (MGI:3794927|PMID:18332111) RGD PMID:18332111 MGI:3794927 NCBI chr 1:87,078,012...87,147,347
Ensembl chr 1:87,078,020...87,147,333
JBrowse link
G Afdn afadin, adherens junction formation factor involved_in ISO (PMID:27815408) RGD PMID:27815408 NCBI chr 1:53,713,873...53,861,918
Ensembl chr 1:53,715,693...53,802,658
JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type NOT|involved_in ISO (MGI:3789553|PMID:17403930) RGD PMID:17403930 MGI:3789553 NCBI chr10:55,744,646...55,756,524
Ensembl chr10:55,744,588...55,756,566
JBrowse link
G Aloxe3 arachidonate lipoxygenase 3 NOT|involved_in ISO (MGI:5488571|PMID:22832496) RGD PMID:22832496 MGI:5488571 NCBI chr10:55,711,996...55,735,915
Ensembl chr10:55,712,043...55,735,911
JBrowse link
G Arl2 ADP-ribosylation factor like GTPase 2 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:221,504,150...221,516,191
Ensembl chr 1:221,504,170...221,516,110
JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within ISO MGI:2389020 (MGI:3574751|PMID:15775979) RGD PMID:15775979 MGI:3574751 NCBI chr19:38,768,467...38,838,395
Ensembl chr19:38,768,467...38,838,395
JBrowse link
G Cdh5 cadherin 5 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr19:1,025,122...1,074,333
Ensembl chr19:1,023,683...1,074,365
JBrowse link
G Cgn cingulin acts_upstream_of_or_within ISO (MGI:5562592|PMID:24385485) RGD PMID:24385485 MGI:5562592 NCBI chr 2:195,909,691...195,937,130
Ensembl chr 2:195,909,626...195,935,878
JBrowse link
G Cldn1 claudin 1 involved_in ISO
IBA
(PMID:25849148), (PMID:26607202)
PMID:21873635
RGD PMID:25849148 PMID:26607202, PMID:21873635 RGD:13792537 NCBI chr11:77,815,216...77,830,373
Ensembl chr11:77,815,181...77,830,416
JBrowse link
G Cldn10 claudin 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:104,026,590...104,115,748
Ensembl chr15:104,026,601...104,115,748
JBrowse link
G Cldn11 claudin 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:115,823,541...115,836,846
Ensembl chr 2:115,823,538...115,836,846
JBrowse link
G Cldn14 claudin 14 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:34,132,581...34,142,813
Ensembl chr11:34,132,581...34,142,753
JBrowse link
G Cldn15 claudin 15 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:22,738,198...22,750,392
Ensembl chr12:22,738,195...22,748,860
JBrowse link
G Cldn16 claudin 16 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:77,683,942...77,703,232
Ensembl chr11:77,681,794...77,703,255
JBrowse link
G Cldn17 claudin 17 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:28,477,184...28,478,360
Ensembl chr11:28,477,184...28,478,360
JBrowse link
G Cldn18 claudin 18 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:107,933,725...107,960,656
Ensembl chr 8:107,934,860...107,952,530
JBrowse link
G Cldn19 claudin 19 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:138,300,692...138,307,982
Ensembl chr 5:138,300,107...138,305,683
JBrowse link
G Cldn2 claudin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:111,122,552...111,133,188
Ensembl chr  X:111,122,552...111,137,769
JBrowse link
G Cldn20 claudin 20 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:44,443,218...44,447,595
Ensembl chr 1:44,446,765...44,447,424
JBrowse link
G Cldn22 claudin 22 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:47,534,349...47,535,358
Ensembl chr16:47,534,349...47,535,358
JBrowse link
G Cldn23 claudin 23 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:59,988,603...59,990,327
Ensembl chr16:59,988,603...59,990,326
JBrowse link
G Cldn24 claudin 24 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:47,536,814...47,537,476
Ensembl chr16:47,536,814...47,537,476
JBrowse link
G Cldn25 claudin 25 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:53,360,490...53,362,387
Ensembl chr 8:53,361,323...53,362,006
JBrowse link
G Cldn3 claudin 3 involved_in ISO
IBA
(PMID:25849148)
PMID:21873635
RGD PMID:25849148, PMID:21873635 RGD:13792537 NCBI chr12:21,831,341...21,832,813
Ensembl chr12:21,831,342...21,832,813
JBrowse link
G Cldn34a claudin 34A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:23,371,171...23,415,287
Ensembl chr  X:23,414,354...23,414,989
JBrowse link
G Cldn34b claudin 34B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:43,780,712...43,786,767
Ensembl chr  X:43,780,960...43,781,586
JBrowse link
G Cldn34c4 claudin 34C4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:97,261,326...97,266,967
Ensembl chr  X:97,261,354...97,262,013
JBrowse link
G Cldn34d claudin 34D involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:43,870,402...43,878,881
Ensembl chr  X:43,870,402...43,878,881
JBrowse link
G Cldn34e claudin 34E involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:44,999,482...45,006,621
Ensembl chr  X:44,999,725...45,000,363
JBrowse link
G Cldn4 claudin 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:24,761,210...24,763,008
Ensembl chr12:24,761,210...24,763,005
JBrowse link
G Cldn5 claudin 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:86,356,292...86,357,718
Ensembl chr11:86,356,294...86,357,718
JBrowse link
G Cldn6 claudin 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:12,999,256...13,002,860
Ensembl chr10:13,000,090...13,002,862
JBrowse link
G Cldn7 claudin 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:56,576,326...56,578,632
Ensembl chr10:56,576,428...56,578,626
JBrowse link
G Cldn8 claudin 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:28,525,641...28,527,890
Ensembl chr11:28,525,643...28,527,890
JBrowse link
G Cldn9 claudin 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:13,003,010...13,004,441
Ensembl chr10:13,003,011...13,004,441
JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISO (PMID:8636221) RGD PMID:8636221 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in ISO
IEA
(PMID:17332497)
GO_REF:0000107
RGD
Ensembl
PMID:17332497 GO_REF:0000107 NCBI chr11:72,164,566...72,378,895
Ensembl chr11:72,163,749...72,378,895
JBrowse link
G Ect2 epithelial cell transforming 2 involved_in ISO (PMID:15254234) RGD PMID:15254234 NCBI chr 2:112,769,385...112,831,476
Ensembl chr 2:112,769,385...112,831,476
JBrowse link
G Esam endothelial cell adhesion molecule involved_in ISO (PMID:26607202) RGD PMID:26607202 NCBI chr 8:39,997,875...40,008,802
Ensembl chr 8:39,997,875...40,008,809
JBrowse link
G Frmpd2 FERM and PDZ domain containing 2 involved_in ISO (PMID:19706687) RGD PMID:19706687 NCBI chr16:9,745,171...9,879,490 JBrowse link
G Grhl2 grainyhead-like transcription factor 2 involved_in ISO (PMID:25152456) RGD PMID:25152456 NCBI chr 7:76,058,623...76,197,360
Ensembl chr 7:76,059,386...76,197,856
JBrowse link
G Itgb1 integrin subunit beta 1 IMP RGD PMID:18579774 RGD:2325293 NCBI chr19:61,677,512...61,725,537
Ensembl chr19:61,677,542...61,725,535
JBrowse link
G LOC100362173 rCG36365-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:43,713,128...43,746,425
Ensembl chr  X:43,745,604...43,746,236
JBrowse link
G LOC102554799 uncharacterized LOC102554799 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:1,500,272...1,505,254
Ensembl chr14:1,499,711...1,505,085
JBrowse link
G LOC680190 hypothetical protein LOC680190 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:43,289,631...43,294,392
Ensembl chr  X:43,293,551...43,294,177
JBrowse link
G LOC685699 hypothetical protein LOC685699 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:23,464,884...23,469,812
Ensembl chr  X:23,464,863...23,469,041
JBrowse link
G LOC685747 hypothetical protein LOC685747 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:24,058,965...24,061,851
Ensembl chr  X:24,059,516...24,061,857
JBrowse link
G LOC685762 hypothetical protein LOC685762 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:24,117,023...24,121,003
Ensembl chr  X:24,117,026...24,120,987
JBrowse link
G LOC685789 hypothetical protein LOC685789 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:22,681,975...22,749,355
Ensembl chr  X:22,674,759...22,737,523
JBrowse link
G Marveld2 MARVEL domain containing 2 involved_in ISO (PMID:20164257), (PMID:23073616) RGD PMID:20164257 PMID:23073616 NCBI chr 2:30,612,746...30,634,308
Ensembl chr 2:30,612,106...30,634,243
JBrowse link
G Marveld3 MARVEL domain containing 3 involved_in IBA
ISO
PMID:21873635
(PMID:20164257)
RGD PMID:20164257, PMID:21873635 RGD:13792537 NCBI chr19:41,710,076...41,724,923
Ensembl chr19:41,710,102...41,724,923
JBrowse link
G Micall2 MICAL-like 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5508599|PMID:18094055)
UniProt
RGD
PMID:18094055 GO_REF:0000024 MGI:5508599 NCBI chr12:16,988,013...17,016,794
Ensembl chr12:16,988,136...17,016,791
JBrowse link
G Mpp7 membrane palmitoylated protein 7 involved_in ISO (PMID:17332497) RGD PMID:17332497 NCBI chr17:60,057,077...60,250,303
Ensembl chr17:60,059,949...60,250,352
JBrowse link
G Mtdh metadherin IEP RGD PMID:15383321 RGD:1359738 NCBI chr 7:72,771,018...72,830,599
Ensembl chr 7:72,772,440...72,827,908
JBrowse link
G Ocln occludin involved_in ISO (PMID:20164257), (PMID:26607202) RGD PMID:20164257 PMID:26607202 NCBI chr 2:30,527,327...30,577,218
Ensembl chr 2:30,527,715...30,577,218
JBrowse link
G Pak2 p21 (RAC1) activated kinase 2 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr11:72,829,407...72,865,815
Ensembl chr11:72,829,238...72,865,902
Ensembl chr11:72,829,238...72,865,902
JBrowse link
G Pard3 par-3 family cell polarity regulator involved_in IMP PMID:18082612 UniProt PMID:18082612 RGD:8553352 NCBI chr19:60,017,746...60,580,628
Ensembl chr19:60,017,746...60,580,651
JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5819325|PMID:27336173)
UniProt
Ensembl
RGD
PMID:27336173 GO_REF:0000024 GO_REF:0000107 MGI:5819325 NCBI chr 8:121,916,233...121,973,145
Ensembl chr 8:121,916,185...121,973,125
JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 involved_in ISO (PMID:26607202) RGD PMID:26607202 NCBI chr10:94,850,971...94,913,202 JBrowse link
G Pof1b POF1B, actin binding protein involved_in ISO (PMID:21940798) RGD PMID:21940798 NCBI chr  X:84,099,618...84,167,717
Ensembl chr  X:84,099,618...84,167,717
JBrowse link
G Rab13 RAB13, member RAS oncogene family involved_in ISS
ISO
GO_REF:0000024
(PMID:12058051), (PMID:15096524)
UniProt
RGD
PMID:12058051 PMID:15096524 GO_REF:0000024 NCBI chr 2:189,581,209...189,586,358
Ensembl chr 2:189,581,644...189,586,338
JBrowse link
G Ramp2 receptor activity modifying protein 2 involved_in ISO
ISS
(PMID:18097473)
(MGI:3772552|PMID:18097473)
GO_REF:0000024
RGD
UniProt
PMID:18097473 GO_REF:0000024 MGI:3772552 NCBI chr10:89,166,170...89,168,962
Ensembl chr10:89,166,890...89,168,965
JBrowse link
G Samt3 spermatogenesis associated multipass transmembrane protein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:54,553,870...54,556,708
Ensembl chr  X:54,553,878...54,556,771
JBrowse link
G Samt4 spermatogenesis associated multipass transmembrane protein 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:24,362,079...24,364,320
Ensembl chr  X:24,362,076...24,364,322
JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:2445832|MGI:3522206 (MGI:4421610|PMID:20047077) RGD PMID:20047077 MGI:4421610 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
JBrowse link
G Tbcd tubulin folding cofactor D involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:110,643,693...110,800,493
Ensembl chr10:110,643,759...110,800,493
JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:8636221) RGD PMID:8636221 NCBI chr 1:126,146,489...126,515,359
Ensembl chr 1:126,146,489...126,227,469
JBrowse link
G Wnt11 Wnt family member 11 acts_upstream_of_or_within ISO MGI:2665014 (MGI:3759355|PMID:17767158) RGD PMID:17767158 MGI:3759355 NCBI chr 1:163,794,136...163,813,756
Ensembl chr 1:163,797,660...163,813,756
JBrowse link
desmosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034767.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr11:88,912,599...88,972,176 JBrowse link
G Jup junction plakoglobin involved_in
acts_upstream_of_or_within
ISO (PMID:20859650), (PMID:9049256)
MGI:1857539 (MGI:1314706|PMID:9847250), (MGI:3843580|PMID:18496566), (MGI:85439|PMID:8954745)
RGD PMID:8954745 PMID:9049256 PMID:9847250 PMID:18496566 PMID:20859650 MGI:1314706 MGI:3843580 MGI:85439 NCBI chr10:88,280,517...88,307,451
Ensembl chr10:88,279,632...88,307,412
JBrowse link
G Pkp2 plakophilin 2 involved_in ISO (PMID:18474624) RGD PMID:18474624 NCBI chr11:88,912,163...88,972,213 JBrowse link
G Pkp3 plakophilin 3 involved_in ISO (PMID:20859650) RGD PMID:20859650 NCBI chr 1:213,884,795...213,897,783
Ensembl chr 1:213,886,775...213,897,783
JBrowse link
G Prkca protein kinase C, alpha involved_in ISO
IEA
(PMID:18474624)
GO_REF:0000107
RGD
Ensembl
PMID:18474624 GO_REF:0000107 NCBI chr10:96,186,509...96,585,168
Ensembl chr10:96,191,133...96,584,947
JBrowse link
gap junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnna1 catenin alpha 1 IMP RGD PMID:12577316 RGD:2289808 NCBI chr18:27,923,229...28,055,972
Ensembl chr18:27,923,572...28,055,960
JBrowse link
G Gja1 gap junction protein, alpha 1 involved_in TAS PMID:15709751 UniProt PMID:15709751 RGD:8554661 NCBI chr20:37,876,650...37,889,097
Ensembl chr20:37,876,650...37,889,089
JBrowse link
G Gja5 gap junction protein, alpha 5 involved_in ISO (PMID:16790700), (PMID:22247482), (PMID:23348765) RGD PMID:16790700 PMID:22247482 PMID:23348765 NCBI chr 2:199,162,745...199,184,942
Ensembl chr 2:199,162,745...199,184,939
JBrowse link
G Gjb2 gap junction protein, beta 2 involved_in
acts_upstream_of_or_within
ISO (PMID:12767933)
(MGI:5568196|PMID:24590285)
RGD PMID:12767933 PMID:24590285 MGI:5568196 NCBI chr15:37,377,313...37,394,494
Ensembl chr15:37,377,316...37,383,277
JBrowse link
G Gjb6 gap junction protein, beta 6 involved_in ISO (PMID:19285977) RGD PMID:19285977 NCBI chr15:37,400,888...37,411,656
Ensembl chr15:37,400,889...37,410,848
JBrowse link
G Gjc1 gap junction protein, gamma 1 involved_in ISO (MGI:5544102|PMID:22982984) RGD PMID:22982984 MGI:5544102 NCBI chr10:90,781,408...90,912,440
Ensembl chr10:90,781,402...90,912,287
JBrowse link
G Gjd3 gap junction protein, delta 3 involved_in ISO (PMID:12154091) RGD PMID:12154091 NCBI chr10:86,888,982...86,891,915
Ensembl chr10:86,889,421...86,890,257
JBrowse link
G Pkp2 plakophilin 2 IMP RGD PMID:17673670 RGD:6784510 NCBI chr11:88,912,163...88,972,213 JBrowse link
negative regulation of bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta involved_in ISO
IEA
(PMID:25816133)
GO_REF:0000107
RGD
Ensembl
PMID:25816133 GO_REF:0000107 NCBI chr16:74,177,233...74,230,809
Ensembl chr16:74,177,215...74,230,815
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:O75116 (PMID:25816133)
Ensembl
RGD
PMID:25816133 GO_REF:0000107 NCBI chr18:1,273,490...1,390,790
Ensembl chr18:1,273,453...1,390,190
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:Q13464 (PMID:25816133)
Ensembl
RGD
PMID:25816133 GO_REF:0000107 NCBI chr 6:42,180,864...42,289,910
Ensembl chr 6:42,180,894...42,289,908
JBrowse link
G Rps6 ribosomal protein S6 IDA RGD PMID:25217631 RGD:11041641 NCBI chr 5:105,197,821...105,200,681
Ensembl chr 5:105,197,857...105,200,148
Ensembl chr 5:105,197,857...105,200,148
JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:25816133) RGD PMID:25816133 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
negative regulation of gap junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace angiotensin I converting enzyme involved_in IEA
ISO
GO_REF:0000107
(MGI:5607357|PMID:25017399)
Ensembl
RGD
PMID:25017399 GO_REF:0000107 MGI:5607357 NCBI chr10:94,170,766...94,213,831
Ensembl chr10:94,170,766...94,187,822
JBrowse link
G Il1b interleukin 1 beta involved_in IEA
ISO
GO_REF:0000107
(PMID:11090614)
Ensembl
RGD
PMID:11090614 GO_REF:0000107 NCBI chr 3:121,876,256...121,882,637
Ensembl chr 3:121,876,263...121,882,726
JBrowse link
G Mir23a microRNA 23a IMP RGD PMID:25798059 RGD:13592600 NCBI chr19:25,318,582...25,318,656
Ensembl chr19:25,318,582...25,318,656
JBrowse link
paranodal junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 IEP RGD PMID:16687515 RGD:1599119 NCBI chr 2:231,224,643...231,522,655
Ensembl chr 2:231,226,949...231,648,122
JBrowse link
G Cd9 CD9 molecule involved_in ISS
ISO
GO_REF:0000024
(MGI:3027661|PMID:14715942)
UniProt
RGD
PMID:14715942 GO_REF:0000024 MGI:3027661 NCBI chr 4:157,977,163...158,010,091
Ensembl chr 4:157,977,162...158,010,166
JBrowse link
G Cntnap1 contactin associated protein 1 involved_in ISS
ISO
TAS
GO_REF:0000024
(MGI:3621602|PMID:16551741), (MGI:4838147|PMID:19816196)
(PMID:27818385)
PMID:19166515
BHF-UCL
RGD
PMID:16551741 PMID:19816196 PMID:27818385, PMID:19166515 GO_REF:0000024 MGI:3621602 MGI:4838147, RGD:6483326 NCBI chr10:89,087,904...89,103,615
Ensembl chr10:89,089,646...89,103,614
JBrowse link
G Epb41l3 erythrocyte membrane protein band 4.1-like 3 involved_in ISO (MGI:5296417|PMID:21966409) RGD PMID:21966409 MGI:5296417 NCBI chr 9:117,314,935...117,666,408
Ensembl chr 9:117,538,009...117,666,410
JBrowse link
G Gnpat glyceronephosphate O-acyltransferase acts_upstream_of_or_within ISO MGI:2670461 (MGI:3843561|PMID:19270340) RGD PMID:19270340 MGI:3843561 NCBI chr19:57,614,813...57,640,524
Ensembl chr19:57,614,628...57,640,726
JBrowse link
G Nfasc neurofascin acts_upstream_of_or_within
involved_in
ISO MGI:3808598|MGI:4837620 (MGI:3621515|PMID:16337912), (MGI:4452171|PMID:20371806)
(MGI:3836161|PMID:19185024)
RGD PMID:16337912 PMID:19185024 PMID:20371806 MGI:3621515 MGI:3836161 MGI:4452171 NCBI chr13:49,335,407...49,522,474
Ensembl chr13:49,335,408...49,522,415
JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO MGI:3614822 (MGI:3613258|PMID:16436605) RGD PMID:16436605 MGI:3613258 NCBI chr10:49,538,588...49,568,583
Ensembl chr10:49,538,588...49,568,583
JBrowse link
G Ugt8 UDP glycosyltransferase 8 involved_in ISO (MGI:3621602|PMID:16551741) RGD PMID:16551741 MGI:3621602 NCBI chr 2:229,644,373...229,718,678
Ensembl chr 2:229,644,382...229,718,659
JBrowse link
positive regulation of bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cldn1 claudin 1 IMP RGD PMID:22684624 RGD:11341733 NCBI chr11:77,815,216...77,830,373
Ensembl chr11:77,815,181...77,830,416
JBrowse link
G Cldn3 claudin 3 involved_in ISO (PMID:20655293) RGD PMID:20655293 NCBI chr12:21,831,341...21,832,813
Ensembl chr12:21,831,342...21,832,813
JBrowse link
G Cldn5 claudin 5 involved_in ISO (PMID:25323998) RGD PMID:25323998 NCBI chr11:86,356,292...86,357,718
Ensembl chr11:86,356,294...86,357,718
JBrowse link
G Epha2 Eph receptor A2 involved_in ISO (PMID:27815408) RGD PMID:27815408 NCBI chr 5:159,845,773...159,874,203
Ensembl chr 5:159,845,774...159,874,206
JBrowse link
G Gcg glucagon involved_in ISO (PMID:25050009) RGD PMID:25050009 NCBI chr 3:48,442,635...48,451,650
Ensembl chr 3:48,442,635...48,451,650
JBrowse link
G Il17a interleukin 17A involved_in IEA
ISO
GO_REF:0000107
(MGI:5788042|PMID:26431948)
Ensembl
RGD
PMID:26431948 GO_REF:0000107 MGI:5788042 NCBI chr 9:26,841,299...26,844,786
Ensembl chr 9:26,841,299...26,844,786
JBrowse link
G Nphp1 nephrocystin 1 involved_in ISO
IEA
(PMID:19755384)
GO_REF:0000107
RGD
Ensembl
PMID:19755384 GO_REF:0000107 NCBI chr 3:120,316,048...120,370,089
Ensembl chr 3:120,316,047...120,373,500
JBrowse link
G Nphp4 nephrocystin 4 involved_in ISO (PMID:19755384) RGD PMID:19755384 NCBI chr 5:169,647,581...169,744,662
Ensembl chr 5:169,659,188...169,744,660
JBrowse link
positive regulation of gap junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin I converting enzyme 2 involved_in ISO
IEA
(PMID:12967627)
GO_REF:0000107
RGD
Ensembl
PMID:12967627 GO_REF:0000107 NCBI chr  X:32,050,734...32,095,860
Ensembl chr  X:32,049,931...32,096,016
JBrowse link
G Agt angiotensinogen involved_in ISO UniProtKB:P00797 (PMID:17416596) RGD PMID:17416596 NCBI chr19:57,321,594...57,333,460
Ensembl chr19:57,321,640...57,333,433
JBrowse link
G Cav1 caveolin 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5607357|PMID:25017399)
Ensembl
RGD
PMID:25017399 GO_REF:0000107 MGI:5607357 NCBI chr 4:44,597,123...44,630,206
Ensembl chr 4:44,597,123...44,630,200
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:33238150) RGD PMID:33238150 NCBI chr 4:74,700,539...77,025,463 JBrowse link
G Irx3 iroquois homeobox 3 involved_in ISO (MGI:5288100|PMID:21825130), (MGI:6101691|PMID:26786475) RGD PMID:21825130 PMID:26786475 MGI:5288100 MGI:6101691 NCBI chr19:15,838,714...15,842,135
Ensembl chr19:15,838,714...15,840,990
JBrowse link
G Tbx5 T-box transcription factor 5 involved_in IEA
ISO
GO_REF:0000107
(MGI:5449667|PMID:22728936)
Ensembl
RGD
PMID:22728936 GO_REF:0000107 MGI:5449667 NCBI chr12:42,059,688...42,148,226
Ensembl chr12:42,097,626...42,148,146
JBrowse link
regulation of bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F11r F11 receptor involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr13:89,826,272...89,850,151
Ensembl chr13:89,826,254...89,850,612
JBrowse link
G Fzd5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3583769 (MGI:5494335|PMID:23610556)
Ensembl
RGD
PMID:23610556 GO_REF:0000107 MGI:5494335 NCBI chr 9:71,443,784...71,445,541
Ensembl chr 9:71,443,588...71,445,739
JBrowse link
G Gja1 gap junction protein, alpha 1 IMP RGD PMID:19509333 RGD:6784505 NCBI chr20:37,876,650...37,889,097
Ensembl chr20:37,876,650...37,889,089
JBrowse link
G Gpbar1 G protein-coupled bile acid receptor 1 involved_in ISO (MGI:5297273|PMID:22046243) RGD PMID:22046243 MGI:5297273 NCBI chr 9:81,555,914...81,560,931
Ensembl chr 9:81,559,605...81,560,594
JBrowse link
G Myo1c myosin 1C involved_in ISO (PMID:21402783) RGD PMID:21402783 NCBI chr10:63,803,311...63,819,614
Ensembl chr10:63,803,309...63,819,614
JBrowse link
G Nedd4l NEDD4 like E3 ubiquitin protein ligase acts_upstream_of_or_within ISO (MGI:4819049|PMID:20504882) RGD PMID:20504882 MGI:4819049 NCBI chr18:60,392,376...60,719,720
Ensembl chr18:60,392,376...60,719,720
JBrowse link
G Pkp2 plakophilin 2 IMP RGD PMID:19509333 RGD:6784505 NCBI chr11:88,912,163...88,972,213 JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in ISO
IEA
(PMID:15905176)
GO_REF:0000107
RGD
Ensembl
PMID:15905176 GO_REF:0000107 NCBI chr19:25,095,089...25,118,869
Ensembl chr19:25,095,089...25,118,860
JBrowse link
G Prkch protein kinase C, eta involved_in ISO
ISS
(PMID:19114660)
GO_REF:0000024
RGD
UniProt
PMID:19114660 GO_REF:0000024 NCBI chr 6:96,479,243...96,677,368
Ensembl chr 6:96,479,430...96,676,225
JBrowse link
G Snai1 snail family transcriptional repressor 1 involved_in ISO (PMID:15314165) RGD PMID:15314165 NCBI chr 3:164,274,710...164,279,199
Ensembl chr 3:164,274,710...164,279,378
JBrowse link
G Snai2 snail family transcriptional repressor 2 involved_in ISO (PMID:15314165) RGD PMID:15314165 NCBI chr11:90,404,421...90,406,730
Ensembl chr11:90,403,333...90,406,797
JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr 1:126,146,489...126,515,359
Ensembl chr 1:126,146,489...126,227,469
JBrowse link
regulation of gap junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aplnr apelin receptor acts_upstream_of_or_within ISO (MGI:5584055|PMID:23603510) RGD PMID:23603510 MGI:5584055 NCBI chr 3:72,540,538...72,544,183
Ensembl chr 3:72,540,538...72,544,182
JBrowse link
slit diaphragm assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptpro protein tyrosine phosphatase, receptor type, O involved_in ISS
ISO
GO_REF:0000024
(MGI:1927435|PMID:11086029)
UniProt
RGD
PMID:11086029 GO_REF:0000024 MGI:1927435 NCBI chr 4:171,250,766...171,461,571
Ensembl chr 4:171,250,818...171,461,677
JBrowse link
tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actg1 actin, gamma 1 involved_in ISO (PMID:22855531) RGD PMID:22855531 NCBI chr10:109,518,429...109,521,288
Ensembl chr 3:75,643,054...75,644,954
Ensembl chr10:75,643,054...75,644,954
JBrowse link
G Cldn11 claudin 11 involved_in ISO
IEA
(PMID:30734065)
GO_REF:0000107
RGD
Ensembl
PMID:30734065 GO_REF:0000107 NCBI chr 2:115,823,541...115,836,846
Ensembl chr 2:115,823,538...115,836,846
JBrowse link
G Cldn12 claudin 12 NOT|involved_in ISO (MGI:6368067|PMID:31511021) RGD PMID:31511021 MGI:6368067 NCBI chr 4:25,681,561...25,692,547
Ensembl chr 4:25,686,392...25,692,547
JBrowse link
G Cldn5 claudin 5 involved_in ISO (MGI:6369916|PMID:30734065) RGD PMID:30734065 MGI:6369916 NCBI chr11:86,356,292...86,357,718
Ensembl chr11:86,356,294...86,357,718
JBrowse link
G Ephb2 Eph receptor B2 IDA RGD PMID:33722292 RGD:127285641 NCBI chr 5:155,024,478...155,143,539
Ensembl chr 5:155,022,493...155,204,456
JBrowse link
G Mpdz multiple PDZ domain crumbs cell polarity complex component involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:99,413,184...99,566,356
Ensembl chr 5:99,413,187...99,566,318
JBrowse link
G Patj PATJ, crumbs cell polarity complex component involved_in ISO
IBA
ISS
(PMID:15738264)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:15738264, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 5:117,038,548...117,340,308
Ensembl chr 5:117,052,260...117,340,336
JBrowse link
tricellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lsr lipolysis stimulated lipoprotein receptor involved_in ISO (MGI:5700290|PMID:22671589), (MGI:6316553|PMID:21245199) RGD PMID:21245199 PMID:22671589 MGI:5700290 MGI:6316553 NCBI chr 1:89,383,515...89,399,041
Ensembl chr 1:89,383,519...89,399,041
JBrowse link
zonula adherens assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi2 abl-interactor 2 involved_in ISO (PMID:15572692) RGD PMID:15572692 NCBI chr 9:67,234,612...67,284,504
Ensembl chr 9:67,234,303...67,282,600
JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 acts_upstream_of_or_within ISO MGI:3757646 (MGI:3722974|PMID:17765678) RGD PMID:17765678 MGI:3722974 NCBI chr15:120,213...230,312
Ensembl chr15:120,372...228,977
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19491
    cellular process 18343
      cellular component organization or biogenesis 6721
        cellular component organization 6481
          cellular component assembly 2996
            cell junction assembly 459
              cell-cell junction assembly 167
                adherens junction assembly + 12
                apical junction assembly + 101
                desmosome assembly 5
                filtration diaphragm assembly + 1
                gap junction assembly + 18
                paranodal junction assembly 8
                tight junction assembly + 98
paths to the root