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ONTOLOGY REPORT - ANNOTATIONS


Term:cell junction assembly
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Accession:GO:0034329 term browser browse the term
Definition:A cellular process that results in the aggregation, arrangement and bonding together of a set of components to form a cell junction.


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cell junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Capza1 capping actin protein of muscle Z-line subunit alpha 1 involved_in ISO
ISS
(PMID:22891260)
GO_REF:0000024
RGD
UniProt
PMID:22891260 GO_REF:0000024 NCBI chr 2:207,305,748...207,350,812
Ensembl chr 2:207,305,752...207,350,812
JBrowse link
G Cdc42 cell division cycle 42 involved_in ISO
ISS
(PMID:22891260)
GO_REF:0000024
RGD
UniProt
PMID:22891260 GO_REF:0000024 NCBI chr 5:155,690,267...155,728,385
Ensembl chr 5:155,691,390...155,728,300
JBrowse link
G Grhl2 grainyhead-like transcription factor 2 involved_in ISO (PMID:25152456) RGD PMID:25152456 NCBI chr 7:76,058,623...76,197,360
Ensembl chr 7:76,059,386...76,197,856
JBrowse link
G Myo9a myosin IXA involved_in ISO
IEA
ISS
(PMID:22891260)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:22891260 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:64,573,248...64,777,607
Ensembl chr 8:64,573,358...64,777,543
JBrowse link
G Ophn1 oligophrenin 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:22891260)
UniProt
RGD
PMID:22891260 GO_REF:0000024 NCBI chr  X:68,185,865...68,579,518
Ensembl chr  X:68,189,161...68,563,137
JBrowse link
G Rhoa ras homolog family member A involved_in ISS
ISO
GO_REF:0000024
(PMID:22891260)
UniProt
RGD
PMID:22891260 GO_REF:0000024 NCBI chr 8:117,082,440...117,116,244
Ensembl chr 8:117,106,576...117,116,167
JBrowse link
G Sh3bp1 SH3-domain binding protein 1 involved_in ISO
ISS
(PMID:22891260)
GO_REF:0000024
RGD
UniProt
PMID:22891260 GO_REF:0000024 NCBI chr 7:120,125,747...120,138,148
Ensembl chr 7:120,125,633...120,138,196
JBrowse link
G Vmp1 vacuole membrane protein 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:17724469)
UniProt
RGD
PMID:17724469 GO_REF:0000024 NCBI chr10:73,901,988...74,001,900
Ensembl chr10:73,902,837...74,001,895
JBrowse link
adherens junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta involved_in ISO
IEA
(PMID:22855531)
GO_REF:0000107
RGD
Ensembl
PMID:22855531 GO_REF:0000107 NCBI chr12:13,715,843...13,718,813
Ensembl chr12:13,715,843...13,718,841
JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISO
IEA
ISS
(PMID:20086044), (PMID:20123964)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20086044 PMID:20123964 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5494340|PMID:23565059)
Ensembl
RGD
PMID:23565059 GO_REF:0000107 MGI:5494340 NCBI chr 2:206,224,015...206,274,910
Ensembl chr 2:206,224,015...206,274,079
JBrowse link
G Jam3 junctional adhesion molecule 3 involved_in ISO (PMID:19060272) RGD PMID:19060272 NCBI chr 8:28,147,110...28,208,466
Ensembl chr 8:28,147,111...28,208,466
JBrowse link
G Pak2 p21 (RAC1) activated kinase 2 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr11:72,829,407...72,865,815
Ensembl chr11:72,829,238...72,865,902
Ensembl chr11:72,829,238...72,865,902
JBrowse link
G Ramp2 receptor activity modifying protein 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3772552|PMID:18097473)
(PMID:18097473)
UniProt
RGD
PMID:18097473 GO_REF:0000024 MGI:3772552 NCBI chr10:89,166,170...89,168,962
Ensembl chr10:89,166,890...89,168,965
JBrowse link
G Smad7 SMAD family member 7 involved_in ISO
IEA
(PMID:18593713)
GO_REF:0000107
RGD
Ensembl
PMID:18593713 GO_REF:0000107 NCBI chr18:71,395,830...71,424,164
Ensembl chr18:71,395,830...71,424,157
JBrowse link
G Tbcd tubulin folding cofactor D involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:110,643,693...110,800,493
Ensembl chr10:110,643,759...110,800,493
JBrowse link
G Vcl vinculin involved_in IEA
ISO
GO_REF:0000107
(PMID:20086044)
Ensembl
RGD
PMID:20086044 GO_REF:0000107 NCBI chr15:3,455,211...3,544,738
Ensembl chr15:3,455,211...3,544,702
JBrowse link
G Zfp703 zinc finger protein 703 involved_in ISO (MGI:4940410|PMID:21317240) RGD PMID:21317240 MGI:4940410 NCBI chr16:69,237,857...69,242,028
Ensembl chr16:69,237,857...69,242,028
JBrowse link
apical junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cldn19 claudin 19 acts_upstream_of_or_within ISO MGI:3583804 (MGI:3583407|PMID:15883201) RGD PMID:15883201 MGI:3583407 NCBI chr 5:138,300,692...138,307,982
Ensembl chr 5:138,300,107...138,305,683
JBrowse link
G Ctnna1 catenin alpha 1 acts_upstream_of_or_within ISO MGI:2176173|MGI:2677796 (MGI:3619284|PMID:16543460), (MGI:5315030|PMID:22411810) RGD PMID:16543460 PMID:22411810 MGI:3619284 MGI:5315030 NCBI chr18:27,923,229...28,055,972
Ensembl chr18:27,923,572...28,055,960
JBrowse link
G Fbf1 Fas binding factor 1 involved_in ISO (PMID:18838552) RGD PMID:18838552 NCBI chr10:104,692,791...104,718,630
Ensembl chr10:104,692,755...104,718,621
JBrowse link
G Pkn2 protein kinase N2 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:4941685|PMID:20974804)
GO_REF:0000107
(PMID:20974804)
UniProt
RGD
Ensembl
PMID:20974804 GO_REF:0000024 GO_REF:0000107 MGI:4941685 NCBI chr 2:248,735,699...248,840,735
Ensembl chr 2:248,735,699...248,840,735
JBrowse link
G Rhoa ras homolog family member A involved_in ISS
ISO
GO_REF:0000024
(MGI:4941685|PMID:20974804)
(PMID:20974804)
UniProt
RGD
PMID:20974804 GO_REF:0000024 MGI:4941685 NCBI chr 8:117,082,440...117,116,244
Ensembl chr 8:117,106,576...117,116,167
JBrowse link
G Rhoc ras homolog family member C involved_in ISO (PMID:20974804)
(MGI:4941685|PMID:20974804)
RGD PMID:20974804 MGI:4941685 NCBI chr 2:207,271,692...207,278,010
Ensembl chr 2:207,271,853...207,279,314
JBrowse link
G Vcl vinculin involved_in ISO
IEA
(PMID:9700171)
GO_REF:0000107
RGD
Ensembl
PMID:9700171 GO_REF:0000107 NCBI chr15:3,455,211...3,544,738
Ensembl chr15:3,455,211...3,544,702
JBrowse link
G Wdr1 WD repeat domain 1 involved_in ISO (PMID:25792565) RGD PMID:25792565 NCBI chr14:76,990,014...77,023,739
Ensembl chr14:76,989,919...77,023,726
JBrowse link
bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07024637.1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr16:9,772,688...9,847,444 JBrowse link
G AABR07037477.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:21,944,613...21,945,305 JBrowse link
G AABR07037590.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:24,629,306...24,629,998 JBrowse link
G Actn4 actinin alpha 4 involved_in ISO (MGI:3794927|PMID:18332111) RGD PMID:18332111 MGI:3794927 NCBI chr 1:87,078,012...87,147,347
Ensembl chr 1:87,078,020...87,147,333
JBrowse link
G Afdn afadin, adherens junction formation factor involved_in ISO
IEA
(PMID:27815408)
GO_REF:0000107
RGD
Ensembl
PMID:27815408 GO_REF:0000107 NCBI chr 1:53,713,873...53,861,918
Ensembl chr 1:53,715,693...53,802,658
JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type NOT|involved_in ISO (MGI:3789553|PMID:17403930) RGD PMID:17403930 MGI:3789553 NCBI chr10:55,744,646...55,756,524
Ensembl chr10:55,744,588...55,756,566
JBrowse link
G Aloxe3 arachidonate lipoxygenase 3 NOT|involved_in ISO (MGI:5488571|PMID:22832496) RGD PMID:22832496 MGI:5488571 NCBI chr10:55,711,996...55,735,915
Ensembl chr10:55,712,043...55,735,911
JBrowse link
G Arl2 ADP-ribosylation factor like GTPase 2 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:221,504,150...221,516,191
Ensembl chr 1:221,504,170...221,516,110
JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within ISO MGI:2389020 (MGI:3574751|PMID:15775979) RGD PMID:15775979 MGI:3574751 NCBI chr19:38,768,467...38,838,395
Ensembl chr19:38,768,467...38,838,395
JBrowse link
G Cdh5 cadherin 5 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr19:1,025,122...1,074,333
Ensembl chr19:1,023,683...1,074,365
JBrowse link
G Cgn cingulin acts_upstream_of_or_within ISO (MGI:5562592|PMID:24385485) RGD PMID:24385485 MGI:5562592 NCBI chr 2:195,909,691...195,937,130
Ensembl chr 2:195,909,626...195,935,878
JBrowse link
G Cldn1 claudin 1 involved_in ISO
IBA
(PMID:25849148), (PMID:26607202)
PMID:21873635
RGD PMID:25849148 PMID:26607202, PMID:21873635 RGD:13792537 NCBI chr11:77,815,216...77,830,373
Ensembl chr11:77,815,181...77,830,416
JBrowse link
G Cldn10 claudin 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:104,026,590...104,115,748
Ensembl chr15:104,026,601...104,115,748
JBrowse link
G Cldn11 claudin 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:115,823,541...115,836,846
Ensembl chr 2:115,823,538...115,836,846
JBrowse link
G Cldn14 claudin 14 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:34,132,581...34,142,813
Ensembl chr11:34,132,581...34,142,753
JBrowse link
G Cldn15 claudin 15 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:22,738,198...22,750,392
Ensembl chr12:22,738,195...22,748,860
JBrowse link
G Cldn16 claudin 16 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:77,683,942...77,703,232
Ensembl chr11:77,681,794...77,703,255
JBrowse link
G Cldn17 claudin 17 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:28,477,184...28,478,360
Ensembl chr11:28,477,184...28,478,360
JBrowse link
G Cldn18 claudin 18 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:107,933,725...107,960,656
Ensembl chr 8:107,934,860...107,952,530
JBrowse link
G Cldn19 claudin 19 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:138,300,692...138,307,982
Ensembl chr 5:138,300,107...138,305,683
JBrowse link
G Cldn2 claudin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:111,122,552...111,133,188
Ensembl chr  X:111,122,552...111,137,769
JBrowse link
G Cldn20 claudin 20 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:44,443,218...44,447,595
Ensembl chr 1:44,446,765...44,447,424
JBrowse link
G Cldn22 claudin 22 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:47,534,349...47,535,358
Ensembl chr16:47,534,349...47,535,358
JBrowse link
G Cldn23 claudin 23 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:59,988,603...59,990,327
Ensembl chr16:59,988,603...59,990,326
JBrowse link
G Cldn24 claudin 24 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:47,536,814...47,537,476
Ensembl chr16:47,536,814...47,537,476
JBrowse link
G Cldn25 claudin 25 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:53,360,490...53,362,387
Ensembl chr 8:53,361,323...53,362,006
JBrowse link
G Cldn3 claudin 3 involved_in ISO
IBA
(PMID:25849148)
PMID:21873635
RGD PMID:25849148, PMID:21873635 RGD:13792537 NCBI chr12:21,831,341...21,832,813
Ensembl chr12:21,831,342...21,832,813
JBrowse link
G Cldn34a claudin 34A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:23,371,171...23,415,287
Ensembl chr  X:23,414,354...23,414,989
JBrowse link
G Cldn34b claudin 34B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:43,780,712...43,786,767
Ensembl chr  X:43,780,960...43,781,586
JBrowse link
G Cldn34c4 claudin 34C4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:97,261,326...97,266,967
Ensembl chr  X:97,261,354...97,262,013
JBrowse link
G Cldn34d claudin 34D involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:43,870,402...43,878,881
Ensembl chr  X:43,870,402...43,878,881
JBrowse link
G Cldn34e claudin 34E involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:44,999,482...45,006,621
Ensembl chr  X:44,999,725...45,000,363
JBrowse link
G Cldn4 claudin 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:24,761,210...24,763,008
Ensembl chr12:24,761,210...24,763,005
JBrowse link
G Cldn5 claudin 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:86,356,292...86,357,718
Ensembl chr11:86,356,294...86,357,718
JBrowse link
G Cldn6 claudin 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:12,999,256...13,002,860
Ensembl chr10:13,000,090...13,002,862
JBrowse link
G Cldn7 claudin 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:56,576,326...56,578,632
Ensembl chr10:56,576,428...56,578,626
JBrowse link
G Cldn8 claudin 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:28,525,641...28,527,890
Ensembl chr11:28,525,643...28,527,890
JBrowse link
G Cldn9 claudin 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:13,003,010...13,004,441
Ensembl chr10:13,003,011...13,004,441
JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISO (PMID:8636221) RGD PMID:8636221 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in ISO
IEA
(PMID:17332497)
GO_REF:0000107
RGD
Ensembl
PMID:17332497 GO_REF:0000107 NCBI chr11:72,164,566...72,378,895
Ensembl chr11:72,163,749...72,378,895
JBrowse link
G Ect2 epithelial cell transforming 2 involved_in ISO (PMID:15254234) RGD PMID:15254234 NCBI chr 2:112,769,385...112,831,476
Ensembl chr 2:112,769,385...112,831,476
JBrowse link
G Esam endothelial cell adhesion molecule involved_in ISO (PMID:26607202) RGD PMID:26607202 NCBI chr 8:39,997,875...40,008,802
Ensembl chr 8:39,997,875...40,008,809
JBrowse link
G Frmpd2 FERM and PDZ domain containing 2 involved_in ISO (PMID:19706687) RGD PMID:19706687 NCBI chr16:9,745,171...9,879,490 JBrowse link
G Grhl2 grainyhead-like transcription factor 2 involved_in ISO (PMID:25152456) RGD PMID:25152456 NCBI chr 7:76,058,623...76,197,360
Ensembl chr 7:76,059,386...76,197,856
JBrowse link
G Itgb1 integrin subunit beta 1 IMP RGD PMID:18579774 RGD:2325293 NCBI chr19:61,677,512...61,725,537
Ensembl chr19:61,677,542...61,725,535
JBrowse link
G LOC100362173 rCG36365-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:43,713,128...43,746,425
Ensembl chr  X:43,745,604...43,746,236
JBrowse link
G LOC102554799 uncharacterized LOC102554799 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:1,500,272...1,505,254
Ensembl chr14:1,499,711...1,505,085
JBrowse link
G LOC680190 hypothetical protein LOC680190 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:43,289,631...43,294,392
Ensembl chr  X:43,293,551...43,294,177
JBrowse link
G LOC685699 hypothetical protein LOC685699 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:23,464,884...23,469,812
Ensembl chr  X:23,464,863...23,469,041
JBrowse link
G LOC685747 hypothetical protein LOC685747 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:24,058,965...24,061,851
Ensembl chr  X:24,059,516...24,061,857
JBrowse link
G LOC685762 hypothetical protein LOC685762 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:24,117,023...24,121,003
Ensembl chr  X:24,117,026...24,120,987
JBrowse link
G LOC685789 hypothetical protein LOC685789 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:22,681,975...22,749,355
Ensembl chr  X:22,674,759...22,737,523
JBrowse link
G Marveld2 MARVEL domain containing 2 involved_in ISO (PMID:20164257), (PMID:23073616) RGD PMID:20164257 PMID:23073616 NCBI chr 2:30,612,746...30,634,308
Ensembl chr 2:30,612,106...30,634,243
JBrowse link
G Marveld3 MARVEL domain containing 3 involved_in IBA
ISO
PMID:21873635
(PMID:20164257)
RGD PMID:20164257, PMID:21873635 RGD:13792537 NCBI chr19:41,710,076...41,724,923
Ensembl chr19:41,710,102...41,724,923
JBrowse link
G Micall2 MICAL-like 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5508599|PMID:18094055)
UniProt
RGD
PMID:18094055 GO_REF:0000024 MGI:5508599 NCBI chr12:16,988,013...17,016,794
Ensembl chr12:16,988,136...17,016,791
JBrowse link
G Mpp7 membrane palmitoylated protein 7 involved_in ISO (PMID:17332497) RGD PMID:17332497 NCBI chr17:60,057,077...60,250,303
Ensembl chr17:60,059,949...60,250,352
JBrowse link
G Mtdh metadherin IEP RGD PMID:15383321 RGD:1359738 NCBI chr 7:72,771,018...72,830,599
Ensembl chr 7:72,772,440...72,827,908
JBrowse link
G Ocln occludin involved_in ISO (PMID:20164257), (PMID:26607202) RGD PMID:20164257 PMID:26607202 NCBI chr 2:30,527,327...30,577,218
Ensembl chr 2:30,527,715...30,577,218
JBrowse link
G Pak2 p21 (RAC1) activated kinase 2 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr11:72,829,407...72,865,815
Ensembl chr11:72,829,238...72,865,902
Ensembl chr11:72,829,238...72,865,902
JBrowse link
G Pard3 par-3 family cell polarity regulator involved_in IMP PMID:18082612 UniProt PMID:18082612 RGD:8553352 NCBI chr19:60,017,746...60,580,628
Ensembl chr19:60,017,746...60,580,651
JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5819325|PMID:27336173)
UniProt
Ensembl
RGD
PMID:27336173 GO_REF:0000024 GO_REF:0000107 MGI:5819325 NCBI chr 8:121,916,233...121,973,145
Ensembl chr 8:121,916,185...121,973,125
JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 involved_in ISO (PMID:26607202) RGD PMID:26607202 NCBI chr10:94,850,971...94,913,202 JBrowse link
G Pof1b POF1B, actin binding protein involved_in ISO (PMID:21940798) RGD PMID:21940798 NCBI chr  X:84,099,618...84,167,717
Ensembl chr  X:84,099,618...84,167,717
JBrowse link
G Rab13 RAB13, member RAS oncogene family involved_in ISS
ISO
GO_REF:0000024
(PMID:12058051), (PMID:15096524)
UniProt
RGD
PMID:12058051 PMID:15096524 GO_REF:0000024 NCBI chr 2:189,581,209...189,586,358
Ensembl chr 2:189,581,644...189,586,338
JBrowse link
G Ramp2 receptor activity modifying protein 2 involved_in ISO
ISS
(PMID:18097473)
(MGI:3772552|PMID:18097473)
GO_REF:0000024
RGD
UniProt
PMID:18097473 GO_REF:0000024 MGI:3772552 NCBI chr10:89,166,170...89,168,962
Ensembl chr10:89,166,890...89,168,965
JBrowse link
G Samt3 spermatogenesis associated multipass transmembrane protein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:54,553,870...54,556,708
Ensembl chr  X:54,553,878...54,556,771
JBrowse link
G Samt4 spermatogenesis associated multipass transmembrane protein 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:24,362,079...24,364,320
Ensembl chr  X:24,362,076...24,364,322
JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:2445832|MGI:3522206 (MGI:4421610|PMID:20047077) RGD PMID:20047077 MGI:4421610 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
JBrowse link
G Tbcd tubulin folding cofactor D involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:110,643,693...110,800,493
Ensembl chr10:110,643,759...110,800,493
JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:8636221) RGD PMID:8636221 NCBI chr 1:126,146,489...126,515,359
Ensembl chr 1:126,146,489...126,227,469
JBrowse link
G Wnt11 Wnt family member 11 acts_upstream_of_or_within ISO MGI:2665014 (MGI:3759355|PMID:17767158) RGD PMID:17767158 MGI:3759355 NCBI chr 1:163,794,136...163,813,756
Ensembl chr 1:163,797,660...163,813,756
JBrowse link
cell-cell junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034767.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr11:88,912,599...88,972,176 JBrowse link
G Arvcf ARVCF, delta catenin family member involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:86,736,125...86,793,795
Ensembl chr11:86,736,142...86,793,791
JBrowse link
G Cdh10 cadherin 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:69,415,174...69,636,849
Ensembl chr 2:69,415,057...69,637,524
JBrowse link
G Cdh11 cadherin 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:2,391,181...2,551,245
Ensembl chr19:2,393,059...2,551,245
JBrowse link
G Cdh12 cadherin 12 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:71,310,228...72,540,063
Ensembl chr 2:72,006,099...72,540,263
JBrowse link
G Cdh18 cadherin 18 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:73,651,408...74,693,342
Ensembl chr 2:74,360,622...74,693,341
JBrowse link
G Cdh19 cadherin 19 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:32,344,954...32,469,887
Ensembl chr13:32,344,966...32,427,177
JBrowse link
G Cdh2 cadherin 2 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:6216737|PMID:26750727)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:26750727 GO_REF:0000024 GO_REF:0000107 MGI:6216737 NCBI chr18:8,146,971...8,366,037
Ensembl chr18:8,146,971...8,360,684
JBrowse link
G Cdh20 cadherin 20 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:24,630,298...24,914,463
Ensembl chr13:24,823,488...24,913,884
JBrowse link
G Cdh22 cadherin 22 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:161,574,993...161,971,102
Ensembl chr 3:161,575,631...161,917,285
JBrowse link
G Cdh24 cadherin 24 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:33,277,845...33,287,546
Ensembl chr15:33,278,713...33,285,779
JBrowse link
G Cdh5 cadherin 5 involved_in IBA
ISO
PMID:21873635
(PMID:23288152)
RGD PMID:23288152, PMID:21873635 RGD:13792537 NCBI chr19:1,025,122...1,074,333
Ensembl chr19:1,023,683...1,074,365
JBrowse link
G Cdh6 cadherin 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:63,100,723...63,246,618
Ensembl chr 2:63,101,739...63,166,509
JBrowse link
G Cdh7 cadherin 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:31,081,064...31,228,884
Ensembl chr13:31,081,804...31,231,213
JBrowse link
G Cdh8 cadherin 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:6,031,654...6,431,502
Ensembl chr19:6,046,665...6,426,216
JBrowse link
G Cdh9 cadherin 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:66,938,796...67,078,897
Ensembl chr 2:66,940,057...67,078,784
JBrowse link
G Cldn5 claudin 5 involved_in ISO (PMID:23288152) RGD PMID:23288152 NCBI chr11:86,356,292...86,357,718
Ensembl chr11:86,356,294...86,357,718
JBrowse link
G Ctnnd1 catenin delta 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:72,001,904...72,053,047
Ensembl chr 3:72,002,152...72,053,049
JBrowse link
G Ctnnd2 catenin delta 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:83,227,247...84,094,315
Ensembl chr 2:83,393,282...84,094,315
JBrowse link
G Dchs1 dachsous cadherin-related 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:170,594,981...170,629,062
Ensembl chr 1:170,594,822...170,628,915
JBrowse link
G Flcn folliculin involved_in ISS
ISO
GO_REF:0000024
(MGI:5487492|PMID:22965878)
UniProt
RGD
PMID:22965878 GO_REF:0000024 MGI:5487492 NCBI chr10:46,153,185...46,172,331
Ensembl chr10:46,153,188...46,172,309
JBrowse link
G Fscn1 fascin actin-bundling protein 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:9571235)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:9571235 GO_REF:0000024 GO_REF:0000107 NCBI chr12:13,655,459...13,668,595
Ensembl chr12:13,656,554...13,668,515
JBrowse link
G Hdac7 histone deacetylase 7 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3693627 (MGI:3692697|PMID:16873063)
Ensembl
RGD
PMID:16873063 GO_REF:0000107 MGI:3692697 NCBI chr 7:139,280,396...139,319,108
Ensembl chr 7:139,281,187...139,318,455
JBrowse link
G Heg1 heart development protein with EGF-like domains 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:70,234,248...70,322,966
Ensembl chr11:70,236,888...70,322,690
JBrowse link
G Lin7b lin-7 homolog B, crumbs cell polarity complex component NAS RGD PMID:10362251 RGD:633233 NCBI chr 1:101,358,313...101,361,439
Ensembl chr 1:101,358,396...101,360,971
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in IEA
ISO
GO_REF:0000107
(MGI:3620334|PMID:16473946)
Ensembl
RGD
PMID:16473946 GO_REF:0000107 MGI:3620334 NCBI chr 7:30,003,429...30,162,095
Ensembl chr 7:30,003,429...30,162,056
JBrowse link
G Pard6b par-6 family cell polarity regulator beta involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:164,822,111...164,843,395
Ensembl chr 3:164,822,111...164,843,395
JBrowse link
G Pkp1 plakophilin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:52,705,174...52,753,089
Ensembl chr13:52,705,174...52,752,997
JBrowse link
G Pkp3 plakophilin 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:213,884,795...213,897,783
Ensembl chr 1:213,886,775...213,897,783
JBrowse link
G Pkp4 plakophilin 4 involved_in IBA
ISO
PMID:21873635
(MGI:5487492|PMID:22965878)
RGD PMID:22965878, PMID:21873635 MGI:5487492, RGD:13792537 NCBI chr 3:45,211,097...45,414,524
Ensembl chr 3:45,277,348...45,414,613
JBrowse link
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:4820667|PMID:20413591)
UniProt
RGD
PMID:20413591 GO_REF:0000024 MGI:4820667 NCBI chr12:47,698,915...47,737,902
Ensembl chr12:47,698,947...47,737,902
JBrowse link
cell-substrate junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fn1 fibronectin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
(MGI:2667760|PMID:12867986)
PMID:21873635
Ensembl
RGD
PMID:12867986, PMID:21873635 GO_REF:0000107 MGI:2667760, RGD:13792537 NCBI chr 9:78,900,111...78,969,018
Ensembl chr 9:78,900,103...78,969,078
JBrowse link
G Itga5 integrin subunit alpha 5 acts_upstream_of_or_within ISO (MGI:2667760|PMID:12867986) RGD PMID:12867986 MGI:2667760 NCBI chr 7:144,970,444...144,993,652
Ensembl chr 7:144,970,444...144,993,652
JBrowse link
G Itgb3 integrin subunit beta 3 acts_upstream_of_or_within ISO (MGI:2667760|PMID:12867986) RGD PMID:12867986 MGI:2667760 NCBI chr10:92,667,869...92,783,413
Ensembl chr10:92,667,869...92,783,410
JBrowse link
G Tln1 talin 1 acts_upstream_of_or_within ISO (MGI:2667760|PMID:12867986) RGD PMID:12867986 MGI:2667760 NCBI chr 5:59,033,635...59,063,592
Ensembl chr 5:59,033,636...59,063,592
JBrowse link
G Tns1 tensin 1 acts_upstream_of_or_within ISO MGI:2447792 (MGI:86584|PMID:9087448) RGD PMID:9087448 MGI:86584 NCBI chr 9:81,190,192...81,401,020
Ensembl chr 9:81,194,119...81,400,987
JBrowse link
desmosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034767.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr11:88,912,599...88,972,176 JBrowse link
G Jup junction plakoglobin involved_in
acts_upstream_of_or_within
ISO (PMID:20859650), (PMID:9049256)
MGI:1857539 (MGI:1314706|PMID:9847250), (MGI:3843580|PMID:18496566), (MGI:85439|PMID:8954745)
RGD PMID:8954745 PMID:9049256 PMID:9847250 PMID:18496566 PMID:20859650 MGI:1314706 MGI:3843580 MGI:85439 NCBI chr10:88,280,517...88,307,451
Ensembl chr10:88,279,632...88,307,412
JBrowse link
G Pkp2 plakophilin 2 involved_in ISO (PMID:18474624) RGD PMID:18474624 NCBI chr11:88,912,163...88,972,213 JBrowse link
G Pkp3 plakophilin 3 involved_in ISO (PMID:20859650) RGD PMID:20859650 NCBI chr 1:213,884,795...213,897,783
Ensembl chr 1:213,886,775...213,897,783
JBrowse link
G Prkca protein kinase C, alpha involved_in ISO
IEA
(PMID:18474624)
GO_REF:0000107
RGD
Ensembl
PMID:18474624 GO_REF:0000107 NCBI chr10:96,186,509...96,585,168
Ensembl chr10:96,191,133...96,584,947
JBrowse link
excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:27418511)
Ensembl
RGD
PMID:27418511 GO_REF:0000107 NCBI chr 4:94,068,112...95,476,864
Ensembl chr 4:94,696,965...95,442,778
JBrowse link
G Lrrc4 leucine rich repeat containing 4 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:3664681|PMID:16980967)
PMID:21873635
RGD PMID:16980967, PMID:21873635 MGI:3664681, RGD:13792537 NCBI chr 4:56,110,658...56,114,254
Ensembl chr 4:56,110,658...56,114,254
JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO (MGI:5780536|PMID:22960622), (MGI:5908777|PMID:26440732) RGD PMID:22960622 PMID:26440732 MGI:5780536 MGI:5908777 NCBI chr 2:111,057,291...111,973,681
Ensembl chr 2:111,057,291...111,793,326
JBrowse link
G Nptn neuroplastin acts_upstream_of_or_within ISO MGI:5621191 (MGI:5581388|PMID:24554721) RGD PMID:24554721 MGI:5581388 NCBI chr 8:63,379,062...63,445,694
Ensembl chr 8:63,379,087...63,445,686
JBrowse link
G Plxnb2 plexin B2 involved_in ISO (MGI:6269924|PMID:29981480) RGD PMID:29981480 MGI:6269924 NCBI chr 7:130,135,484...130,161,568
Ensembl chr 7:130,135,464...130,151,880
JBrowse link
focal adhesion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn1 actinin, alpha 1 involved_in ISO
IEA
(PMID:16807302)
GO_REF:0000107
RGD
Ensembl
PMID:16807302 GO_REF:0000107 NCBI chr 6:103,376,557...103,470,497
Ensembl chr 6:103,375,799...103,470,555
JBrowse link
G Actn2 actinin alpha 2 involved_in ISO (PMID:16807302) RGD PMID:16807302 NCBI chr17:66,304,530...66,397,647
Ensembl chr17:66,304,501...66,397,653
JBrowse link
G Actn3 actinin alpha 3 involved_in ISO (PMID:16807302) RGD PMID:16807302 NCBI chr 1:220,120,532...220,136,460
Ensembl chr 1:220,120,533...220,136,470
JBrowse link
G Ajuba ajuba LIM protein acts_upstream_of_or_within ISO MGI:3578221 (MGI:3577694|PMID:15728191) RGD PMID:15728191 MGI:3577694 NCBI chr15:33,208,210...33,218,456
Ensembl chr15:33,208,216...33,218,456
JBrowse link
G Arhgap6 Rho GTPase activating protein 6 acts_upstream_of_or_within ISO (MGI:2447568|PMID:10699171) RGD PMID:10699171 MGI:2447568 NCBI chr  X:26,314,561...26,845,242
Ensembl chr  X:26,315,878...26,376,467
JBrowse link
G Bcl2 BCL2, apoptosis regulator involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857134 (MGI:3526739|PMID:15292044)
Ensembl
RGD
PMID:15292044 GO_REF:0000107 MGI:3526739 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Bcr BCR activator of RhoGEF and GTPase involved_in ISO (PMID:23940119) RGD PMID:23940119 NCBI chr20:14,421,250...14,546,406
Ensembl chr20:14,421,141...14,545,772
JBrowse link
G Coro2b coronin 2B acts_upstream_of_or_within ISO MGI:4419137 (MGI:6110508|PMID:29162887) RGD PMID:29162887 MGI:6110508 NCBI chr 8:67,374,617...67,492,490
Ensembl chr 8:67,376,294...67,492,037
JBrowse link
G Cttn cortactin involved_in IMP PMID:18768925 UniProt PMID:18768925 RGD:10047281 NCBI chr 1:217,602,698...217,638,196
NCBI chr 1:215,255,385...215,290,882
Ensembl chr 1:217,602,698...217,638,152
Ensembl chr 1:217,602,698...217,638,152
JBrowse link
G Dlc1 DLC1 Rho GTPase activating protein acts_upstream_of_or_within ISO MGI:3529997 (MGI:3529660|PMID:15710412) RGD PMID:15710412 MGI:3529660 NCBI chr16:58,776,489...59,247,752
Ensembl chr16:59,077,574...59,247,754
JBrowse link
G Fermt2 FERM domain containing kindlin 2 involved_in ISO (PMID:21356350)
(MGI:3789779|PMID:18483218)
RGD PMID:18483218 PMID:21356350 MGI:3789779 NCBI chr15:19,807,806...19,876,557
Ensembl chr15:19,807,808...19,876,408
JBrowse link
G Itga2 integrin subunit alpha 2 IMP RGD PMID:15591055 RGD:8693310 NCBI chr 2:46,996,904...47,097,011
Ensembl chr 2:47,000,323...47,096,961
JBrowse link
G Pdpk1 3-phosphoinositide dependent protein kinase-1 IMP RGD PMID:14585963 RGD:1581775 NCBI chr10:13,446,373...13,525,248
Ensembl chr10:13,451,624...13,515,448
JBrowse link
G Peak1 pseudopodium-enriched atypical kinase 1 involved_in ISO (PMID:23105102) RGD PMID:23105102 NCBI chr 8:60,861,742...61,080,128
Ensembl chr 8:60,867,819...61,079,526
JBrowse link
G Pip5k1a phosphatidylinositol-4-phosphate 5-kinase, type 1, alpha involved_in ISO (PMID:20660631) RGD PMID:20660631 NCBI chr 2:196,227,669...196,270,949
Ensembl chr 2:196,227,670...196,270,826
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta IMP RGD PMID:14585963 RGD:1581775 NCBI chr15:42,827,306...42,947,796
Ensembl chr15:42,827,310...42,947,656
JBrowse link
G Ptprk protein tyrosine phosphatase, receptor type, K involved_in ISO (PMID:15899872) RGD PMID:15899872 NCBI chr 1:17,445,052...18,058,266
Ensembl chr 1:17,446,417...18,058,055
JBrowse link
G Pxn paxillin acts_upstream_of_or_within ISO (MGI:2680875|PMID:14636584) RGD PMID:14636584 MGI:2680875 NCBI chr12:46,797,953...46,845,107
Ensembl chr12:46,797,954...46,845,080
JBrowse link
G Rcc2 regulator of chromosome condensation 2 involved_in ISO (PMID:19738201) RGD PMID:19738201 NCBI chr 5:159,220,531...159,236,313
Ensembl chr 5:159,220,979...159,234,320
JBrowse link
G Rhod ras homolog family member D involved_in ISO (PMID:23087206) RGD PMID:23087206 NCBI chr 1:219,668,352...219,682,287
Ensembl chr 1:219,668,352...219,682,287
JBrowse link
G Rhpn1 rhophilin, Rho GTPase binding protein 1 acts_upstream_of_or_within ISO MGI:6316664 (MGI:6316493|PMID:25071083) RGD PMID:25071083 MGI:6316493 NCBI chr 7:116,738,999...116,749,791
Ensembl chr 7:116,739,062...116,748,715
JBrowse link
G Sorbs1 sorbin and SH3 domain containing 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:1196128|PMID:9461600)
UniProt
RGD
PMID:9461600 GO_REF:0000024 MGI:1196128 NCBI chr 1:259,373,921...259,502,108
Ensembl chr 1:259,376,933...259,484,569
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase involved_in ISO (PMID:21411625) RGD PMID:21411625 NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
JBrowse link
G Ston1 stonin 1 acts_upstream_of_or_within ISO MGI:5788726 (MGI:5699914|PMID:26437238) RGD PMID:26437238 MGI:5699914 NCBI chr 6:12,332,465...12,379,783
Ensembl chr 6:12,362,813...12,379,783
JBrowse link
G Taok2 TAO kinase 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:10660600)
Ensembl
RGD
PMID:10660600 GO_REF:0000107 NCBI chr 1:198,301,789...198,354,601
Ensembl chr 1:198,301,938...198,320,075
JBrowse link
G Tesk2 testis associated actin remodelling kinase 2 involved_in IMP PMID:11418599 UniProt PMID:11418599 RGD:727318 NCBI chr 5:135,574,172...135,659,842
Ensembl chr 5:135,574,172...135,659,842
JBrowse link
G Thsd1 thrombospondin type 1 domain containing 1 involved_in ISO (PMID:29069646) RGD PMID:29069646 NCBI chr16:74,680,621...74,712,368
Ensembl chr16:74,680,621...74,710,704
JBrowse link
G Thy1 Thy-1 cell surface antigen involved_in IDA
IBA
PMID:15093746
PMID:21873635
UniProt
GO_Central
PMID:15093746, PMID:21873635 RGD:8553684, RGD:13792537 NCBI chr 8:48,382,121...48,387,271
Ensembl chr 8:48,382,121...48,386,935
JBrowse link
G Whamm WASP homolog associated with actin, golgi membranes and microtubules involved_in ISO (PMID:23087206) RGD PMID:23087206 NCBI chr 1:143,401,986...143,430,356
Ensembl chr 1:143,401,986...143,430,356
JBrowse link
gap junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnna1 catenin alpha 1 IMP RGD PMID:12577316 RGD:2289808 NCBI chr18:27,923,229...28,055,972
Ensembl chr18:27,923,572...28,055,960
JBrowse link
G Gja1 gap junction protein, alpha 1 involved_in TAS PMID:15709751 UniProt PMID:15709751 RGD:8554661 NCBI chr20:37,876,650...37,889,097
Ensembl chr20:37,876,650...37,889,089
JBrowse link
G Gja5 gap junction protein, alpha 5 involved_in ISO (PMID:16790700), (PMID:22247482), (PMID:23348765) RGD PMID:16790700 PMID:22247482 PMID:23348765 NCBI chr 2:199,162,745...199,184,942
Ensembl chr 2:199,162,745...199,184,939
JBrowse link
G Gjb2 gap junction protein, beta 2 involved_in
acts_upstream_of_or_within
ISO (PMID:12767933)
(MGI:5568196|PMID:24590285)
RGD PMID:12767933 PMID:24590285 MGI:5568196 NCBI chr15:37,377,313...37,394,494
Ensembl chr15:37,377,316...37,383,277
JBrowse link
G Gjb6 gap junction protein, beta 6 involved_in ISO (PMID:19285977) RGD PMID:19285977 NCBI chr15:37,400,888...37,411,656
Ensembl chr15:37,400,889...37,410,848
JBrowse link
G Gjc1 gap junction protein, gamma 1 involved_in ISO (MGI:5544102|PMID:22982984) RGD PMID:22982984 MGI:5544102 NCBI chr10:90,781,408...90,912,440
Ensembl chr10:90,781,402...90,912,287
JBrowse link
G Gjd3 gap junction protein, delta 3 involved_in ISO (PMID:12154091) RGD PMID:12154091 NCBI chr10:86,888,982...86,891,915
Ensembl chr10:86,889,421...86,890,257
JBrowse link
G Pkp2 plakophilin 2 IMP RGD PMID:17673670 RGD:6784510 NCBI chr11:88,912,163...88,972,213 JBrowse link
gephyrin clustering involved in postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn2 neuroligin 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5284797|PMID:15620359)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:15620359 GO_REF:0000024 GO_REF:0000107 MGI:5284797 NCBI chr10:56,431,586...56,444,847
Ensembl chr10:56,431,573...56,444,847
JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5284797|PMID:15620359), (MGI:5285129|PMID:21424692)
BHF-UCL
RGD
PMID:15620359 PMID:21424692 GO_REF:0000024 MGI:5284797 MGI:5285129 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
G Nrxn2 neurexin 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5285129|PMID:21424692)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:21424692 GO_REF:0000024 GO_REF:0000107 MGI:5285129 NCBI chr 1:221,792,191...221,908,047
Ensembl chr 1:221,792,221...221,908,049
JBrowse link
G Zdhhc12 zinc finger DHHC-type palmitoyltransferase 12 involved_in ISS
ISO
GO_REF:0000024
(MGI:5586946|PMID:25025157)
UniProt
RGD
PMID:25025157 GO_REF:0000024 MGI:5586946 NCBI chr 3:8,656,397...8,659,102
Ensembl chr 3:8,656,412...8,659,102
JBrowse link
hemidesmosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col17a1 collagen type XVII alpha 1 chain involved_in ISO (PMID:12482924) RGD PMID:12482924 NCBI chr 1:267,416,681...267,465,049
Ensembl chr 1:267,417,459...267,463,705
JBrowse link
G Dst dystonin involved_in IBA
ISO
PMID:21873635
(PMID:12482924)
RGD PMID:12482924, PMID:21873635 RGD:13792537 NCBI chr 9:37,902,336...38,296,961
Ensembl chr 9:37,902,303...38,196,273
JBrowse link
G Itgb4 integrin subunit beta 4 involved_in IEA
ISO
GO_REF:0000002
(PMID:12482924), (PMID:23496044)
GO_REF:0000107
InterPro
RGD
Ensembl
PMID:12482924 PMID:23496044 GO_REF:0000002 GO_REF:0000107 NCBI chr10:104,524,000...104,560,180
Ensembl chr10:104,523,996...104,561,078
JBrowse link
G Lama3 laminin subunit alpha 3 IMP RGD PMID:8923212 RGD:633107 NCBI chr18:3,704,866...3,941,215
Ensembl chr18:3,705,916...3,940,838
JBrowse link
G Lamc1 laminin subunit gamma 1 involved_in ISO (PMID:15159456) RGD PMID:15159456 NCBI chr13:70,656,727...70,783,515
Ensembl chr13:70,658,707...70,783,515
JBrowse link
G Plec plectin involved_in IBA
IEA
ISO
ISS
PMID:21873635
GO_REF:0000107
(PMID:12482924)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12482924, PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr 7:117,230,319...117,291,859
Ensembl chr 7:117,230,319...117,289,961
JBrowse link
inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbln4 cerebellin 4 precursor involved_in ISO (MGI:6280523|PMID:30679375), (MGI:6383349|PMID:25534236) RGD PMID:25534236 PMID:30679375 MGI:6280523 MGI:6383349 NCBI chr 3:170,033,166...170,040,953
Ensembl chr 3:170,033,166...170,040,953
JBrowse link
G Fgf13 fibroblast growth factor 13 involved_in ISS
ISO
GO_REF:0000024
(MGI:6280523|PMID:30679375)
UniProt
RGD
PMID:30679375 GO_REF:0000024 MGI:6280523 NCBI chr  X:142,053,648...142,589,274
Ensembl chr  X:142,053,654...142,248,369
JBrowse link
G Gabra1 gamma-aminobutyric acid type A receptor subunit alpha 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:6208009|PMID:27129275)
(PMID:23909897), (PMID:25489750)
UniProt
RGD
PMID:23909897 PMID:25489750 PMID:27129275 GO_REF:0000024 MGI:6208009 NCBI chr10:27,310,718...27,371,802
Ensembl chr10:27,310,725...27,366,665
JBrowse link
G Gabra2 gamma-aminobutyric acid type A receptor subunit alpha 2 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:6208009|PMID:27129275)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:27129275 GO_REF:0000024 GO_REF:0000107 MGI:6208009 NCBI chr14:39,662,411...39,801,082
Ensembl chr14:39,661,968...39,798,302
JBrowse link
G Gabrb2 gamma-aminobutyric acid type A receptor subunit beta 2 involved_in ISO
ISS
(PMID:23909897), (PMID:25489750)
(MGI:6208009|PMID:27129275)
GO_REF:0000024
RGD
UniProt
PMID:23909897 PMID:25489750 PMID:27129275 GO_REF:0000024 MGI:6208009 NCBI chr10:27,973,694...28,193,072
Ensembl chr10:27,973,681...28,187,565
JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta 3 involved_in ISO
IEA
ISS
(PMID:25489750)
GO_REF:0000107
(MGI:6208009|PMID:27129275)
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:25489750 PMID:27129275 GO_REF:0000024 GO_REF:0000107 MGI:6208009 NCBI chr 1:113,034,251...113,265,364
Ensembl chr 1:112,976,770...113,265,364
JBrowse link
G Gabrg2 gamma-aminobutyric acid type A receptor subunit gamma 2 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:6208009|PMID:27129275)
GO_REF:0000024
(PMID:23909897), (PMID:25489750)
Ensembl
RGD
UniProt
PMID:23909897 PMID:25489750 PMID:27129275 GO_REF:0000024 GO_REF:0000107 MGI:6208009 NCBI chr10:27,090,913...27,179,786
Ensembl chr10:27,092,827...27,179,900
JBrowse link
G Lgi2 leucine-rich repeat LGI family, member 2 involved_in ISO
IBA
(MGI:6280523|PMID:30679375)
PMID:21873635
RGD PMID:30679375, PMID:21873635 MGI:6280523, RGD:13792537 NCBI chr14:60,764,325...60,791,809
Ensembl chr14:60,764,409...60,796,116
JBrowse link
G Nlgn2 neuroligin 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:5780536|PMID:22960622)
Ensembl
RGD
PMID:22960622 GO_REF:0000107 MGI:5780536 NCBI chr10:56,431,586...56,444,847
Ensembl chr10:56,431,573...56,444,847
JBrowse link
G Npas4 neuronal PAS domain protein 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:3826741|PMID:18815592)
UniProt
RGD
PMID:18815592 GO_REF:0000024 MGI:3826741 NCBI chr 1:220,260,310...220,278,177
Ensembl chr 1:220,261,008...220,265,772
JBrowse link
G Plxnb1 plexin B1 involved_in ISO (MGI:5498626|PMID:23699507), (MGI:6269924|PMID:29981480) RGD PMID:23699507 PMID:29981480 MGI:5498626 MGI:6269924 NCBI chr 8:117,832,826...117,858,515
Ensembl chr 8:117,836,701...117,856,689
JBrowse link
negative regulation of bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta involved_in ISO
IEA
(PMID:25816133)
GO_REF:0000107
RGD
Ensembl
PMID:25816133 GO_REF:0000107 NCBI chr16:74,177,233...74,230,809
Ensembl chr16:74,177,215...74,230,815
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:O75116 (PMID:25816133)
Ensembl
RGD
PMID:25816133 GO_REF:0000107 NCBI chr18:1,273,490...1,390,790
Ensembl chr18:1,273,453...1,390,190
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:Q13464 (PMID:25816133)
Ensembl
RGD
PMID:25816133 GO_REF:0000107 NCBI chr 6:42,180,864...42,289,910
Ensembl chr 6:42,180,894...42,289,908
JBrowse link
G Rps6 ribosomal protein S6 IDA RGD PMID:25217631 RGD:11041641 NCBI chr 5:105,197,821...105,200,681
Ensembl chr 5:105,197,857...105,200,148
Ensembl chr 5:105,197,857...105,200,148
JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:25816133) RGD PMID:25816133 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
negative regulation of focal adhesion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvrl1 activin A receptor like type 1 involved_in ISO (PMID:12453878) RGD PMID:12453878 NCBI chr 7:142,769,942...142,787,336
Ensembl chr 7:142,776,252...142,787,335
JBrowse link
G Apod apolipoprotein D involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:21705670)
UniProt
Ensembl
RGD
PMID:21705670 GO_REF:0000024 GO_REF:0000107 NCBI chr11:72,705,204...72,726,263
Ensembl chr11:72,705,129...72,726,301
JBrowse link
G Arhgap6 Rho GTPase activating protein 6 involved_in ISO (PMID:10699171) RGD PMID:10699171 NCBI chr  X:26,314,561...26,845,242
Ensembl chr  X:26,315,878...26,376,467
JBrowse link
G Bcas3 BCAS3, microtubule associated cell migration factor involved_in ISO (MGI:5582152|PMID:22300583) RGD PMID:22300583 MGI:5582152 NCBI chr10:72,756,548...73,271,851
NCBI chr10:72,951,303...73,015,309
JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 involved_in ISO
IEA
(PMID:24859005)
GO_REF:0000107
RGD
Ensembl
PMID:24859005 GO_REF:0000107 NCBI chr 8:122,003,719...122,185,495
Ensembl chr 8:122,003,916...122,185,495
JBrowse link
G Coro1c coronin 1C involved_in ISO (PMID:19913511) RGD PMID:19913511 NCBI chr12:48,481,741...48,554,054
Ensembl chr12:48,481,750...48,554,052
JBrowse link
G Dlc1 DLC1 Rho GTPase activating protein involved_in IEA
ISO
GO_REF:0000107
(PMID:19158340)
Ensembl
RGD
PMID:19158340 GO_REF:0000107 NCBI chr16:58,776,489...59,247,752
Ensembl chr16:59,077,574...59,247,754
JBrowse link
G Dmtn dematin actin binding protein involved_in ISO (MGI:3803395|PMID:18505823) RGD PMID:18505823 MGI:3803395 NCBI chr15:52,292,762...52,320,385
Ensembl chr15:52,292,765...52,320,385
JBrowse link
G Dusp22 dual specificity phosphatase 22 involved_in ISO (PMID:20018849) RGD PMID:20018849 NCBI chr17:34,986,589...35,037,297
Ensembl chr17:34,986,591...35,037,076
JBrowse link
G Fam107a family with sequence similarity 107, member A involved_in ISO
IEA
ISS
(PMID:20543869)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20543869 GO_REF:0000024 GO_REF:0000107 NCBI chr15:18,399,145...18,415,959
Ensembl chr15:18,399,515...18,415,965
JBrowse link
G Itgb1bp1 integrin subunit beta 1 binding protein 1 involved_in ISO (PMID:12473654)
(MGI:5486544|PMID:18227284)
RGD PMID:12473654 PMID:18227284 MGI:5486544 NCBI chr 6:43,348,927...43,363,633
Ensembl chr 6:43,348,958...43,363,335
JBrowse link
G Lrp1 LDL receptor related protein 1 IMP RGD PMID:20197276 RGD:13800550 NCBI chr 7:70,846,313...70,927,028
Ensembl chr 7:70,846,344...70,926,903
JBrowse link
G Mmp14 matrix metallopeptidase 14 IDA RGD PMID:15044209 RGD:1582604 NCBI chr15:33,074,441...33,083,666
Ensembl chr15:33,074,441...33,083,655
JBrowse link
G Phldb2 pleckstrin homology-like domain, family B, member 2 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr11:60,042,879...60,051,229
Ensembl chr11:57,265,732...57,481,589
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:9616126) RGD PMID:9616126 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
G Rcc2 regulator of chromosome condensation 2 involved_in ISO (MGI:5551375|PMID:19738201) RGD PMID:19738201 MGI:5551375 NCBI chr 5:159,220,531...159,236,313
Ensembl chr 5:159,220,979...159,234,320
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase involved_in IMP PMID:21440892 BHF-UCL PMID:21440892 RGD:7248703 NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
JBrowse link
negative regulation of gap junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace angiotensin I converting enzyme involved_in IEA
ISO
GO_REF:0000107
(MGI:5607357|PMID:25017399)
Ensembl
RGD
PMID:25017399 GO_REF:0000107 MGI:5607357 NCBI chr10:94,170,766...94,213,831
Ensembl chr10:94,170,766...94,187,822
JBrowse link
G Il1b interleukin 1 beta involved_in IEA
ISO
GO_REF:0000107
(PMID:11090614)
Ensembl
RGD
PMID:11090614 GO_REF:0000107 NCBI chr 3:121,876,256...121,882,637
Ensembl chr 3:121,876,263...121,882,726
JBrowse link
G Mir23a microRNA 23a IMP RGD PMID:25798059 RGD:13592600 NCBI chr19:25,318,582...25,318,656
Ensembl chr19:25,318,582...25,318,656
JBrowse link
negative regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbln1 cerebellin 1 precursor involved_in ISS
ISO
GO_REF:0000024
(MGI:5707148|PMID:24467251)
UniProt
RGD
PMID:24467251 GO_REF:0000024 MGI:5707148 NCBI chr19:20,607,507...20,611,316
Ensembl chr19:20,607,507...20,611,316
JBrowse link
negative regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in ISO (MGI:6274944|PMID:29643768) RGD PMID:29643768 MGI:6274944 NCBI chr 1:248,952,896...248,956,579
Ensembl chr 1:248,895,738...248,898,607
Ensembl chr 1:248,895,738...248,898,607
JBrowse link
negative regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epha7 Eph receptor A7 involved_in ISO (MGI:5426777|PMID:19036963) RGD PMID:19036963 MGI:5426777 NCBI chr 5:43,602,744...43,761,198
Ensembl chr 5:43,603,043...43,757,549
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 IDA RGD PMID:23358245 RGD:9743980 NCBI chr20:8,515,142...8,574,632
Ensembl chr20:8,515,142...8,574,082
JBrowse link
G Ptk2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO MGI:1857596 (MGI:3056242|PMID:15378065) RGD PMID:15378065 MGI:3056242 NCBI chr 7:114,436,419...114,611,317
Ensembl chr 7:114,437,361...114,590,119
JBrowse link
G Slit1 slit guidance ligand 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:260,843,481...260,992,366
Ensembl chr 1:260,843,483...260,992,366
JBrowse link
G Tlr2 toll-like receptor 2 involved_in ISO UniProtKB:P05067|UniProtKB:P49768 (MGI:5307186|PMID:22198949) RGD PMID:22198949 MGI:5307186 NCBI chr 2:182,840,171...182,846,061
Ensembl chr 2:182,840,727...182,846,061
JBrowse link
G Wnt5a Wnt family member 5A involved_in IEA
ISO
GO_REF:0000107
(MGI:4820709|PMID:18986540)
Ensembl
RGD
PMID:18986540 GO_REF:0000107 MGI:4820709 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
negative regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsk3b glycogen synthase kinase 3 beta involved_in IMP PMID:25764078 CACAO PMID:25764078 RGD:15023478 NCBI chr11:65,060,884...65,208,842
Ensembl chr11:65,066,235...65,209,268
JBrowse link
neurexin clustering involved in presynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:2665153|PMID:12796785)
BHF-UCL
RGD
PMID:12796785 GO_REF:0000024 MGI:2665153 NCBI chr 2:111,057,291...111,973,681
Ensembl chr 2:111,057,291...111,793,326
JBrowse link
neuroligin clustering involved in postsynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh2 cadherin 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:4457945|PMID:20534458)
Ensembl
RGD
PMID:20534458 GO_REF:0000107 MGI:4457945 NCBI chr18:8,146,971...8,366,037
Ensembl chr18:8,146,971...8,360,684
JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO (MGI:4457945|PMID:20534458) RGD PMID:20534458 MGI:4457945 NCBI chr 4:10,995,241...12,472,423
Ensembl chr 4:10,995,234...11,610,518
JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5284797|PMID:15620359), (MGI:5285129|PMID:21424692)
BHF-UCL
RGD
PMID:15620359 PMID:21424692 GO_REF:0000024 MGI:5284797 MGI:5285129 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
G Nrxn2 neurexin 2 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5285129|PMID:21424692)
GO_REF:0000024
Ensembl
RGD
BHF-UCL
PMID:21424692 GO_REF:0000024 GO_REF:0000107 MGI:5285129 NCBI chr 1:221,792,191...221,908,047
Ensembl chr 1:221,792,221...221,908,049
JBrowse link
paranodal junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 IEP RGD PMID:16687515 RGD:1599119 NCBI chr 2:231,224,643...231,522,655
Ensembl chr 2:231,226,949...231,648,122
JBrowse link
G Cd9 CD9 molecule involved_in ISS
ISO
GO_REF:0000024
(MGI:3027661|PMID:14715942)
UniProt
RGD
PMID:14715942 GO_REF:0000024 MGI:3027661 NCBI chr 4:157,977,163...158,010,091
Ensembl chr 4:157,977,162...158,010,166
JBrowse link
G Cntnap1 contactin associated protein 1 involved_in ISS
ISO
TAS
GO_REF:0000024
(MGI:3621602|PMID:16551741), (MGI:4838147|PMID:19816196)
(PMID:27818385)
PMID:19166515
BHF-UCL
RGD
PMID:16551741 PMID:19816196 PMID:27818385, PMID:19166515 GO_REF:0000024 MGI:3621602 MGI:4838147, RGD:6483326 NCBI chr10:89,087,904...89,103,615
Ensembl chr10:89,089,646...89,103,614
JBrowse link
G Epb41l3 erythrocyte membrane protein band 4.1-like 3 involved_in ISO (MGI:5296417|PMID:21966409) RGD PMID:21966409 MGI:5296417 NCBI chr 9:117,314,935...117,666,408
Ensembl chr 9:117,538,009...117,666,410
JBrowse link
G Gnpat glyceronephosphate O-acyltransferase acts_upstream_of_or_within ISO MGI:2670461 (MGI:3843561|PMID:19270340) RGD PMID:19270340 MGI:3843561 NCBI chr19:57,614,813...57,640,524
Ensembl chr19:57,614,628...57,640,726
JBrowse link
G Nfasc neurofascin acts_upstream_of_or_within
involved_in
ISO MGI:3808598|MGI:4837620 (MGI:3621515|PMID:16337912), (MGI:4452171|PMID:20371806)
(MGI:3836161|PMID:19185024)
RGD PMID:16337912 PMID:19185024 PMID:20371806 MGI:3621515 MGI:3836161 MGI:4452171 NCBI chr13:49,335,407...49,522,474
Ensembl chr13:49,335,408...49,522,415
JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO MGI:3614822 (MGI:3613258|PMID:16436605) RGD PMID:16436605 MGI:3613258 NCBI chr10:49,538,588...49,568,583
Ensembl chr10:49,538,588...49,568,583
JBrowse link
G Ugt8 UDP glycosyltransferase 8 involved_in ISO (MGI:3621602|PMID:16551741) RGD PMID:16551741 MGI:3621602 NCBI chr 2:229,644,373...229,718,678
Ensembl chr 2:229,644,382...229,718,659
JBrowse link
positive regulation of bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cldn1 claudin 1 IMP RGD PMID:22684624 RGD:11341733 NCBI chr11:77,815,216...77,830,373
Ensembl chr11:77,815,181...77,830,416
JBrowse link
G Cldn3 claudin 3 involved_in ISO (PMID:20655293) RGD PMID:20655293 NCBI chr12:21,831,341...21,832,813
Ensembl chr12:21,831,342...21,832,813
JBrowse link
G Cldn5 claudin 5 involved_in ISO (PMID:25323998) RGD PMID:25323998 NCBI chr11:86,356,292...86,357,718
Ensembl chr11:86,356,294...86,357,718
JBrowse link
G Epha2 Eph receptor A2 involved_in ISO (PMID:27815408) RGD PMID:27815408 NCBI chr 5:159,845,773...159,874,203
Ensembl chr 5:159,845,774...159,874,206
JBrowse link
G Gcg glucagon involved_in ISO (PMID:25050009) RGD PMID:25050009 NCBI chr 3:48,442,635...48,451,650
Ensembl chr 3:48,442,635...48,451,650
JBrowse link
G Il17a interleukin 17A involved_in IEA
ISO
GO_REF:0000107
(MGI:5788042|PMID:26431948)
Ensembl
RGD
PMID:26431948 GO_REF:0000107 MGI:5788042 NCBI chr 9:26,841,299...26,844,786
Ensembl chr 9:26,841,299...26,844,786
JBrowse link
G Nphp1 nephrocystin 1 involved_in ISO
IEA
(PMID:19755384)
GO_REF:0000107
RGD
Ensembl
PMID:19755384 GO_REF:0000107 NCBI chr 3:120,316,048...120,370,089
Ensembl chr 3:120,316,047...120,373,500
JBrowse link
G Nphp4 nephrocystin 4 involved_in ISO (PMID:19755384) RGD PMID:19755384 NCBI chr 5:169,647,581...169,744,662
Ensembl chr 5:169,659,188...169,744,660
JBrowse link
positive regulation of cell junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cldn19 claudin 19 involved_in ISO (PMID:27593915) RGD PMID:27593915 NCBI chr 5:138,300,692...138,307,982
Ensembl chr 5:138,300,107...138,305,683
JBrowse link
G Cldn3 claudin 3 involved_in ISO (PMID:27593915) RGD PMID:27593915 NCBI chr12:21,831,341...21,832,813
Ensembl chr12:21,831,342...21,832,813
JBrowse link
G Crb3 crumbs cell polarity complex component 3 involved_in ISO (MGI:4939579|PMID:21145499) RGD PMID:21145499 MGI:4939579 NCBI chr 9:9,982,529...9,986,896
Ensembl chr 9:9,980,720...9,985,630
JBrowse link
G Flot1 flotillin 1 involved_in IBA
ISO
PMID:21873635
(MGI:5634880|PMID:24046456)
(PMID:24046456)
RGD PMID:24046456, PMID:21873635 MGI:5634880, RGD:13792537 NCBI chr20:3,427,890...3,438,418
Ensembl chr20:3,427,880...3,438,396
JBrowse link
positive regulation of excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sema4a semaphorin 4A involved_in ISO (MGI:6269924|PMID:29981480) RGD PMID:29981480 MGI:6269924 NCBI chr 2:187,799,568...187,823,014
Ensembl chr 2:187,799,568...187,822,997
JBrowse link
G Vstm5 V-set and transmembrane domain containing 5 involved_in ISS
ISO
GO_REF:0000024
(MGI:5800585|PMID:27683913)
UniProt
RGD
PMID:27683913 GO_REF:0000024 MGI:5800585 NCBI chr 8:13,796,009...13,816,125
Ensembl chr 8:13,796,021...13,816,109
JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:21670302) RGD PMID:21670302 NCBI chr 4:122,994,425...123,040,609
Ensembl chr 4:122,994,425...123,040,609
JBrowse link
positive regulation of focal adhesion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in ISO (PMID:24863063) RGD PMID:24863063 NCBI chr 3:10,041,820...10,145,076
Ensembl chr 3:10,041,826...10,144,388
Ensembl chr 3:10,041,826...10,144,388
JBrowse link
G Cfl1 cofilin 1 IMP RGD PMID:24093776 RGD:11570550 NCBI chr 1:220,869,805...220,873,337
Ensembl chr 1:220,869,805...220,873,337
JBrowse link
G Col16a1 collagen type XVI alpha 1 chain involved_in ISO (PMID:24466237) RGD PMID:24466237 NCBI chr 5:148,257,030...148,311,645
Ensembl chr 5:148,257,642...148,311,645
JBrowse link
G Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 IDA RGD PMID:22139091 RGD:9685417 NCBI chr 7:94,479,931...94,563,086
Ensembl chr 7:94,480,396...94,563,001
JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO MGI:3822451 (MGI:3821807|PMID:18794329) RGD PMID:18794329 MGI:3821807 NCBI chr13:35,622,472...35,673,449
Ensembl chr13:35,580,098...35,668,968
JBrowse link
G Fermt2 FERM domain containing kindlin 2 involved_in ISO (PMID:29496737) RGD PMID:29496737 NCBI chr15:19,807,806...19,876,557
Ensembl chr15:19,807,808...19,876,408
JBrowse link
G Fmn1 formin 1 acts_upstream_of_or_within ISO MGI:3800994 (MGI:3798334|PMID:18560567) RGD PMID:18560567 MGI:3798334 NCBI chr 3:104,783,093...105,170,761
Ensembl chr 3:104,816,987...105,086,436
JBrowse link
G Hrg histidine-rich glycoprotein involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:14744774), (PMID:16436387)
Ensembl
UniProt
RGD
PMID:14744774 PMID:16436387 GO_REF:0000024 GO_REF:0000107 NCBI chr11:81,621,274...81,639,938
Ensembl chr11:81,621,283...81,639,952
JBrowse link
G Iqgap1 IQ motif containing GTPase activating protein 1 IMP RGD PMID:23657573 RGD:11049552 NCBI chr 1:142,525,041...142,615,673
Ensembl chr 1:142,525,046...142,615,673
JBrowse link
G Itgb1bp1 integrin subunit beta 1 binding protein 1 involved_in ISO (MGI:5486551|PMID:17654484) RGD PMID:17654484 MGI:5486551 NCBI chr 6:43,348,927...43,363,633
Ensembl chr 6:43,348,958...43,363,335
JBrowse link
G Kdr kinase insert domain receptor involved_in IEA
ISO
GO_REF:0000107
(PMID:12820653)
Ensembl
RGD
PMID:12820653 GO_REF:0000107 NCBI chr14:34,727,677...34,787,127
Ensembl chr14:34,727,623...34,787,183
JBrowse link
G Lims1 LIM zinc finger domain containing 1 involved_in ISO (PMID:20926685) RGD PMID:20926685 NCBI chr20:27,895,981...28,004,767
Ensembl chr20:27,954,433...28,002,082
JBrowse link
G LOC681544 similar to histidine-rich glycoprotein involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 Ensembl chr11:81,621,283...81,639,952 JBrowse link
G Map4k4 mitogen-activated protein kinase kinase kinase kinase 4 involved_in ISO (MGI:6189265|PMID:25490267) RGD PMID:25490267 MGI:6189265 NCBI chr 9:46,657,444...46,782,545
Ensembl chr 9:46,657,575...46,782,545
JBrowse link
G Myh9 myosin, heavy chain 9 IMP RGD PMID:21598299 RGD:12798522 NCBI chr 7:118,740,005...118,792,507
Ensembl chr 7:118,741,110...118,792,625
JBrowse link
G Myoc myocilin involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:18855004)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:18855004 GO_REF:0000024 GO_REF:0000107 NCBI chr13:80,517,531...80,527,928
Ensembl chr13:80,517,536...80,527,928
JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (PMID:24863063) RGD PMID:24863063 NCBI chr19:61,332,351...61,486,166
Ensembl chr19:61,332,351...61,485,858
JBrowse link
G Poldip2 DNA polymerase delta interacting protein 2 IMP RGD PMID:30354218 RGD:124713558 NCBI chr10:65,781,994...65,790,833
Ensembl chr10:65,780,494...65,790,272
JBrowse link
G Ppm1f protein phosphatase, Mg2+/Mn2+ dependent, 1F involved_in ISS
ISO
GO_REF:0000024
(PMID:20016286)
UniProt
RGD
PMID:20016286 GO_REF:0000024 NCBI chr11:88,313,709...88,343,726
Ensembl chr11:88,313,709...88,343,627
JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 IMP RGD PMID:16905534 RGD:39456088 NCBI chr12:40,895,515...40,955,999
Ensembl chr12:40,895,515...40,955,999
JBrowse link
G Ptprj protein tyrosine phosphatase, receptor type, J involved_in ISO (PMID:21091576) RGD PMID:21091576 NCBI chr 3:79,233,519...79,390,956
Ensembl chr 3:79,233,525...79,390,956
JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO (PMID:23129259) RGD PMID:23129259 NCBI chr12:13,090,316...13,111,841
Ensembl chr12:13,090,172...13,111,873
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5486551|PMID:17654484)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17654484 GO_REF:0000024 GO_REF:0000107 MGI:5486551 NCBI chr18:1,273,490...1,390,790
Ensembl chr18:1,273,453...1,390,190
JBrowse link
G S100a10 S100 calcium binding protein A10 involved_in ISO (PMID:23129259) RGD PMID:23129259 NCBI chr 2:193,892,589...193,901,236
Ensembl chr 2:193,892,589...193,901,236
JBrowse link
G Sdc4 syndecan 4 IMP RGD PMID:10504291 RGD:2312327 NCBI chr 3:160,872,503...160,891,190
Ensembl chr 3:160,872,503...160,891,190
JBrowse link
G Smad3 SMAD family member 3 IDA RGD PMID:15987742 RGD:2300418 NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349
JBrowse link
G Tek TEK receptor tyrosine kinase involved_in ISO (PMID:18425120) RGD PMID:18425120 NCBI chr 5:113,725,717...113,852,799
Ensembl chr 5:113,725,717...113,852,799
JBrowse link
G Thy1 Thy-1 cell surface antigen involved_in ISO
ISS
(PMID:18346467)
(MGI:3796911|PMID:18346467)
RGD PMID:18346467, PMID:18346467 MGI:3796911, RGD:12793016 NCBI chr 8:48,382,121...48,387,271
Ensembl chr 8:48,382,121...48,386,935
JBrowse link
G Tsc1 TSC complex subunit 1 involved_in ISO (PMID:10806479) RGD PMID:10806479 NCBI chr 3:7,219,955...7,269,063
Ensembl chr 3:7,237,192...7,265,145
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO
ISS
(PMID:16489009)
GO_REF:0000024
RGD
UniProt
PMID:16489009 GO_REF:0000024 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
G Wnt4 Wnt family member 4 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:P01112 (MGI:5487484|PMID:23027131)
Ensembl
RGD
PMID:23027131 GO_REF:0000107 MGI:5487484 NCBI chr 5:155,649,238...155,668,065
Ensembl chr 5:155,649,217...155,672,579
JBrowse link
positive regulation of gap junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin I converting enzyme 2 involved_in ISO
IEA
(PMID:12967627)
GO_REF:0000107
RGD
Ensembl
PMID:12967627 GO_REF:0000107 NCBI chr  X:32,050,734...32,095,860
Ensembl chr  X:32,049,931...32,096,016
JBrowse link
G Agt angiotensinogen involved_in ISO UniProtKB:P00797 (PMID:17416596) RGD PMID:17416596 NCBI chr19:57,321,594...57,333,460
Ensembl chr19:57,321,640...57,333,433
JBrowse link
G Cav1 caveolin 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5607357|PMID:25017399)
Ensembl
RGD
PMID:25017399 GO_REF:0000107 MGI:5607357 NCBI chr 4:44,597,123...44,630,206
Ensembl chr 4:44,597,123...44,630,200
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:33238150) RGD PMID:33238150 NCBI chr 4:74,700,539...77,025,463 JBrowse link
G Irx3 iroquois homeobox 3 involved_in ISO (MGI:5288100|PMID:21825130), (MGI:6101691|PMID:26786475) RGD PMID:21825130 PMID:26786475 MGI:5288100 MGI:6101691 NCBI chr19:15,838,714...15,842,135
Ensembl chr19:15,838,714...15,840,990
JBrowse link
G Tbx5 T-box transcription factor 5 involved_in IEA
ISO
GO_REF:0000107
(MGI:5449667|PMID:22728936)
Ensembl
RGD
PMID:22728936 GO_REF:0000107 MGI:5449667 NCBI chr12:42,059,688...42,148,226
Ensembl chr12:42,097,626...42,148,146
JBrowse link
positive regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sema4a semaphorin 4A involved_in ISO (MGI:6269924|PMID:29981480) RGD PMID:29981480 MGI:6269924 NCBI chr 2:187,799,568...187,823,014
Ensembl chr 2:187,799,568...187,822,997
JBrowse link
G Sema4d semaphorin 4D involved_in ISO (MGI:5498626|PMID:23699507), (MGI:6269924|PMID:29981480) RGD PMID:23699507 PMID:29981480 MGI:5498626 MGI:6269924 NCBI chr17:13,516,276...13,538,513
Ensembl chr17:13,488,376...13,553,974
JBrowse link
positive regulation of presynaptic active zone assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in IDA PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chr 2:111,057,291...111,973,681
Ensembl chr 2:111,057,291...111,793,326
JBrowse link
G Nrxn1 neurexin 1 involved_in TAS PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
positive regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr3 actin related protein 3 IMP RGD PMID:18430734 RGD:2306201 NCBI chr13:41,695,520...41,738,622
Ensembl chr13:41,695,183...41,738,658
JBrowse link
G Adgrb1 adhesion G protein-coupled receptor B1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 7:115,766,484...115,828,514 JBrowse link
G Adgrb2 adhesion G protein-coupled receptor B2 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 5:148,168,530...148,231,587
Ensembl chr 5:148,193,710...148,231,587
JBrowse link
G Adgrb3 adhesion G protein-coupled receptor B3 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 9:31,280,623...32,022,535
Ensembl chr 9:31,281,316...32,019,205
JBrowse link
G Adgre5 adhesion G protein-coupled receptor E5 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr19:24,854,981...24,875,712
Ensembl chr19:24,855,299...24,875,137
JBrowse link
G Adgrl1 adhesion G protein-coupled receptor L1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr19:25,029,037...25,069,146
Ensembl chr19:25,029,037...25,069,142
JBrowse link
G Adgrl2 adhesion G protein-coupled receptor L2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5576449|PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 MGI:5576449 NCBI chr 2:258,792,838...258,997,145
Ensembl chr 2:258,792,839...258,997,145
JBrowse link
G Adgrl3 adhesion G protein-coupled receptor L3 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr14:28,362,176...29,226,085
Ensembl chr14:28,393,394...28,967,980
JBrowse link
G Adnp activity-dependent neuroprotector homeobox IDA RGD PMID:15800376 RGD:2312779 NCBI chr 3:164,937,188...164,964,819
Ensembl chr 3:164,937,198...164,964,702
JBrowse link
G Amigo1 adhesion molecule with Ig like domain 1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 2:210,977,125...210,982,582
Ensembl chr 2:210,977,938...210,982,579
JBrowse link
G Amigo2 adhesion molecule with Ig like domain 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5576449|PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 MGI:5576449 NCBI chr 7:138,704,124...138,707,221
Ensembl chr 7:138,704,126...138,707,221
JBrowse link
G Amigo3 adhesion molecule with Ig like domain 3 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 8:116,830,773...116,832,299 JBrowse link
G Asic2 acid sensing ion channel subunit 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180111 (MGI:3851850|PMID:19571134)
Ensembl
RGD
PMID:19571134 GO_REF:0000107 MGI:3851850 NCBI chr10:68,247,800...69,347,223
Ensembl chr10:68,248,655...68,517,564
JBrowse link
G Bdnf brain-derived neurotrophic factor involved_in ISO
IEA
(PMID:19036963)
GO_REF:0000107
RGD
Ensembl
PMID:19036963 GO_REF:0000107 NCBI chr 3:100,768,637...100,819,216
Ensembl chr 3:100,768,637...100,819,210
JBrowse link
G Bhlhb9 basic helix-loop-helix family member B9 involved_in ISO (MGI:5545985|PMID:21199326) RGD PMID:21199326 MGI:5545985 NCBI chr  X:106,359,981...106,393,457
Ensembl chr  X:106,390,759...106,393,459
JBrowse link
G Cbln1 cerebellin 1 precursor acts_upstream_of_or_within ISO MGI:1096391 (MGI:5002432|PMID:21356198) RGD PMID:21356198 MGI:5002432 NCBI chr19:20,607,507...20,611,316
Ensembl chr19:20,607,507...20,611,316
JBrowse link
G Cbln2 cerebellin 2 precursor acts_upstream_of_or_within ISO (MGI:5002432|PMID:21356198) RGD PMID:21356198 MGI:5002432 NCBI chr18:83,775,568...83,783,841
Ensembl chr18:83,777,665...83,782,930
JBrowse link
G Clstn1 calsyntenin 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1929897|MGI:2178323 (MGI:5576449|PMID:24613359)
RGD PMID:24613359, PMID:21873635 MGI:5576449, RGD:13792537 NCBI chr 5:166,533,262...166,601,686
Ensembl chr 5:166,533,181...166,601,684
JBrowse link
G Clstn2 calsyntenin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:1929895|MGI:2178323 (MGI:5576449|PMID:24613359)
PMID:21873635
Ensembl
RGD
PMID:24613359, PMID:21873635 GO_REF:0000107 MGI:5576449, RGD:13792537 NCBI chr 8:105,322,577...106,036,821
Ensembl chr 8:105,323,837...105,462,168
JBrowse link
G Clstn3 calsyntenin 3 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
PMID:21873635
MGI:1929895|MGI:1929897 (MGI:5576449|PMID:24613359)
GO_REF:0000107
RGD
Ensembl
PMID:24613359, PMID:21873635 GO_REF:0000107 MGI:5576449, RGD:13792537 NCBI chr 4:157,044,736...157,078,013
Ensembl chr 4:157,043,925...157,078,130
JBrowse link
G Cux2 cut-like homeobox 2 involved_in ISO (MGI:4836115|PMID:20510857) RGD PMID:20510857 MGI:4836115 NCBI chr12:40,016,774...40,221,067
Ensembl chr12:40,018,937...40,219,291
JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 involved_in ISO (MGI:5608921|PMID:25232112) RGD PMID:25232112 MGI:5608921 NCBI chr15:120,213...230,312
Ensembl chr15:120,372...228,977
JBrowse link
G Eef2k eukaryotic elongation factor-2 kinase IMP RGD PMID:20427644 RGD:10401235 NCBI chr 1:190,780,211...190,839,926
Ensembl chr 1:190,780,236...190,842,324
JBrowse link
G Efna5 ephrin A5 involved_in IEA
ISO
GO_REF:0000107
(MGI:5426777|PMID:19036963)
Ensembl
RGD
PMID:19036963 GO_REF:0000107 MGI:5426777 NCBI chr 9:110,054,002...110,329,878
Ensembl chr 9:110,057,155...110,225,486
JBrowse link
G Ephb1 Eph receptor B1 involved_in ISS
ISO
GO_REF:0000024
(MGI:2683349|PMID:14691139)
UniProt
RGD
PMID:14691139 GO_REF:0000024 MGI:2683349 NCBI chr 8:110,376,954...110,813,193
Ensembl chr 8:110,376,954...110,813,000
JBrowse link
G Ephb2 Eph receptor B2 involved_in ISO (MGI:2683349|PMID:14691139), (MGI:4881358|PMID:21029865) RGD PMID:14691139 PMID:21029865 MGI:2683349 MGI:4881358 NCBI chr 5:155,024,478...155,143,539
Ensembl chr 5:155,022,493...155,204,456
JBrowse link
G Ephb3 Eph receptor B3 involved_in ISO (MGI:2683349|PMID:14691139) RGD PMID:14691139 MGI:2683349 NCBI chr11:83,527,960...83,546,742
Ensembl chr11:83,527,962...83,546,674
JBrowse link
G Flrt1 fibronectin leucine rich transmembrane protein 1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 1:222,340,481...222,417,915
Ensembl chr 1:222,344,713...222,350,173
JBrowse link
G Flrt2 fibronectin leucine rich transmembrane protein 2 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 6:119,518,459...119,613,534
Ensembl chr 6:119,519,714...119,609,296
JBrowse link
G Flrt3 fibronectin leucine rich transmembrane protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5576449|PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 MGI:5576449 NCBI chr 3:134,684,446...134,696,586
Ensembl chr 3:134,683,065...134,696,654
JBrowse link
G Ghrl ghrelin and obestatin prepropeptide acts_upstream_of_or_within ISO MGI:3045041 (MGI:3620293|PMID:16491079) RGD PMID:16491079 MGI:3620293 NCBI chr 4:145,674,157...145,678,066
Ensembl chr 4:145,674,157...145,678,066
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:27418511)
Ensembl
RGD
PMID:27418511 GO_REF:0000107 NCBI chr 4:94,068,112...95,476,864
Ensembl chr 4:94,696,965...95,442,778
JBrowse link
G Il1rap interleukin 1 receptor accessory protein involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
(MGI:5645611|PMID:25908590)
(MGI:5315316|PMID:22357843)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22357843 PMID:25908590 GO_REF:0000024 GO_REF:0000107 MGI:5315316 MGI:5645611 NCBI chr11:77,456,648...77,593,208
Ensembl chr11:77,463,954...77,593,207
JBrowse link
G Il1rapl1 interleukin 1 receptor accessory protein-like 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5645611|PMID:25908590)
UniProt
RGD
PMID:25908590 GO_REF:0000024 MGI:5645611 NCBI chr  X:55,439,388...57,004,865
Ensembl chr  X:55,439,578...56,765,893
JBrowse link
G Lingo2 leucine rich repeat and Ig domain containing 2 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 5:51,466,367...51,638,161 JBrowse link
G Lingo4 leucine rich repeat and Ig domain containing 4 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 2:195,617,044...195,643,502
Ensembl chr 2:195,617,044...195,643,502
JBrowse link
G Lrrc24 leucine rich repeat containing 24 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 7:117,779,733...117,786,872
Ensembl chr 7:117,779,620...117,786,872
JBrowse link
G Lrrc4b leucine rich repeat containing 4B involved_in ISO
IBA
(MGI:5294265|PMID:21940441)
PMID:21873635
RGD PMID:21940441, PMID:21873635 MGI:5294265, RGD:13792537 NCBI chr 1:100,434,418...100,468,914
Ensembl chr 1:100,447,998...100,468,868
JBrowse link
G Lrrn1 leucine rich repeat neuronal 1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 4:139,633,310...139,679,730
Ensembl chr 4:139,670,092...139,673,143
JBrowse link
G Lrrn3 leucine rich repeat neuronal 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5576449|PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 MGI:5576449 NCBI chr 6:61,374,328...61,405,195
Ensembl chr 6:61,374,328...61,405,195
JBrowse link
G LRRTM1 leucine rich repeat transmembrane neuronal 1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 4:108,300,927...108,316,373
Ensembl chr 4:108,301,129...108,316,373
JBrowse link
G Lrrtm2 leucine rich repeat transmembrane neuronal 2 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr18:28,012,877...28,017,925
Ensembl chr18:28,012,877...28,017,925
JBrowse link
G Lrrtm3 leucine rich repeat transmembrane neuronal 3 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr20:25,990,304...26,163,656
Ensembl chr20:25,990,304...26,163,656
JBrowse link
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 4:110,699,577...111,497,643
Ensembl chr 4:110,699,557...111,497,643
JBrowse link
G Lrtm1 leucine-rich repeats and transmembrane domains 1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr16:4,993,728...5,005,110
Ensembl chr16:4,997,461...5,003,066
JBrowse link
G Lrtm2 leucine-rich repeats and transmembrane domains 2 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 4:151,375,568...151,397,485
Ensembl chr 4:151,375,572...151,390,263
JBrowse link
G Nlgn1 neuroligin 1 involved_in
acts_upstream_of_or_within
IDA
ISO
PMID:17582332
(MGI:5002432|PMID:21356198)
PMID:15797875
RGD PMID:21356198, PMID:17582332, PMID:15797875 MGI:5002432, RGD:8553502, RGD:8554205 NCBI chr 2:111,057,291...111,973,681
Ensembl chr 2:111,057,291...111,793,326
JBrowse link
G Nlgn2 neuroligin 2 involved_in IDA PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chr10:56,431,586...56,444,847
Ensembl chr10:56,431,573...56,444,847
JBrowse link
G Nlgn3 neuroligin 3 involved_in IDA
ISO
PMID:15797875
(MGI:5320268|PMID:21642956)
RGD PMID:21642956, PMID:15797875 MGI:5320268, RGD:8554205 NCBI chr  X:71,199,390...71,227,460
Ensembl chr  X:71,199,491...71,222,732
JBrowse link
G Nrxn1 neurexin 1 involved_in
acts_upstream_of_or_within
ISS
ISO
TAS
GO_REF:0000024
MGI:88281|MGI:88282 (MGI:5002432|PMID:21356198)
PMID:15797875
BHF-UCL
RGD
PMID:21356198, PMID:15797875 GO_REF:0000024 MGI:5002432, RGD:8554205 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 2:187,143,568...187,160,373
Ensembl chr 2:187,143,568...187,160,373
JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5576449|PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 MGI:5576449 NCBI chr17:5,934,651...6,245,778
Ensembl chr17:5,933,729...6,244,676
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 1:139,890,537...140,262,503
Ensembl chr 1:139,890,560...140,262,503
JBrowse link
G Oxt oxytocin/neurophysin I prepropeptide IDA RGD PMID:16488155 RGD:2304173 NCBI chr 3:123,106,694...123,107,534
Ensembl chr 3:123,106,694...123,107,534
JBrowse link
G Oxtr oxytocin receptor IMP RGD PMID:16488155 RGD:2304173 NCBI chr 4:144,399,326...144,417,598
Ensembl chr 4:144,403,358...144,416,116
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in IDA PMID:21414895 CACAO PMID:21414895 RGD:15023480 NCBI chr 2:31,742,326...31,826,882
Ensembl chr 2:31,745,088...31,826,867
JBrowse link
G Prkca protein kinase C, alpha IMP RGD PMID:18073185 RGD:2293299 NCBI chr10:96,186,509...96,585,168
Ensembl chr10:96,191,133...96,584,947
JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in ISO (MGI:5645611|PMID:25908590), (MGI:5902672|PMID:25989451) RGD PMID:25908590 PMID:25989451 MGI:5645611 MGI:5902672 NCBI chr 5:92,862,229...93,514,071
Ensembl chr 5:92,862,267...93,244,202
JBrowse link
G Slitrk1 SLIT and NTRK-like family, member 1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr15:93,303,382...93,307,420
Ensembl chr15:93,303,382...93,307,420
JBrowse link
G Slitrk2 SLIT and NTRK-like family, member 2 acts_upstream_of_or_within
involved_in
ISO (MGI:5576449|PMID:24613359)
(MGI:5902672|PMID:25989451)
RGD PMID:24613359 PMID:25989451 MGI:5576449 MGI:5902672 NCBI chr  X:151,099,388...151,111,816
Ensembl chr  X:151,103,576...151,107,016
JBrowse link
G Slitrk3 SLIT and NTRK-like family, member 3 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 2:170,446,582...170,461,513
Ensembl chr 2:170,452,702...170,460,754
JBrowse link
G Slitrk4 SLIT and NTRK-like family, member 4 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr  X:147,582,195...147,589,529 JBrowse link
G Slitrk5 SLIT and NTRK-like family, member 5 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr15:96,817,907...96,826,760
Ensembl chr15:96,821,832...96,826,653
JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr15:95,507,632...95,514,259
Ensembl chr15:95,507,640...95,514,259
JBrowse link
G Srpx2 sushi-repeat-containing protein, X-linked 2 involved_in ISO
IDA
(PMID:24179158) RGD PMID:24179158, PMID:24179158 RGD:8553698 NCBI chr  X:104,734,035...104,760,658
Ensembl chr  X:104,734,082...104,760,547
JBrowse link
G St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 IMP RGD PMID:16887122 RGD:27372880 NCBI chr 1:135,336,374...135,406,699
Ensembl chr 1:135,336,374...135,406,700
JBrowse link
G Stau2 staufen double-stranded RNA binding protein 2 IMP RGD PMID:16418534 RGD:10043163 NCBI chr 5:2,257,910...2,497,429 JBrowse link
G Syndig1 synapse differentiation inducing 1 involved_in ISO
IBA
IMP
(PMID:20152115)
PMID:21873635
(MGI:4439218|PMID:20152115)
RGD PMID:20152115, PMID:21873635, PMID:20152115 MGI:4439218, RGD:13792537, RGD:8554654 NCBI chr 3:145,031,427...145,199,273
Ensembl chr 3:145,032,200...145,199,356
JBrowse link
G Thbs2 thrombospondin 2 IMP RGD PMID:15707899 RGD:1580068 NCBI chr 1:56,653,929...56,683,571
Ensembl chr 1:56,653,938...56,683,731
JBrowse link
G Tpbg trophoblast glycoprotein acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 8:93,491,761...93,495,132
Ensembl chr 8:93,491,761...93,495,130
JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 IMP RGD PMID:12750002 RGD:1299567 NCBI chr11:89,557,273...89,591,175
Ensembl chr11:89,557,273...89,591,175
JBrowse link
G Wnt7a Wnt family member 7A involved_in
acts_upstream_of_or_within
ISO (PMID:18986540)
(MGI:1195230|PMID:9405095)
RGD PMID:9405095 PMID:18986540 MGI:1195230 NCBI chr 4:122,994,425...123,040,609
Ensembl chr 4:122,994,425...123,040,609
JBrowse link
positive regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrn agrin involved_in ISS
ISO
GO_REF:0000024
(MGI:1337916|PMID:10402191)
UniProt
RGD
PMID:10402191 GO_REF:0000024 MGI:1337916 NCBI chr 5:173,589,910...173,622,813
Ensembl chr 5:173,589,819...173,622,645
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in IMP PMID:25764078 CACAO PMID:25764078 RGD:15023478 NCBI chr11:65,060,884...65,208,842
Ensembl chr11:65,066,235...65,209,268
JBrowse link
G Musk muscle associated receptor tyrosine kinase IMP RGD PMID:14749715 RGD:2317108 NCBI chr 5:75,392,790...75,498,694
Ensembl chr 5:75,392,790...75,498,694
JBrowse link
postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3772418|PMID:18082964) RGD PMID:18082964 MGI:3772418 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
G Shank1 SH3 and multiple ankyrin repeat domains 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:100,297,137...100,344,377
Ensembl chr 1:100,297,152...100,344,377
JBrowse link
G Shank2 SH3 and multiple ankyrin repeat domains 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:217,149,156...217,593,950
Ensembl chr 1:217,151,166...217,592,763
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in IBA
ISO
IEA
ISS
PMID:21873635
(MGI:4948759|PMID:21423165)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
BHF-UCL
PMID:21423165, PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:4948759, RGD:13792537 NCBI chr 7:130,474,278...130,534,679
Ensembl chr 7:130,474,279...130,534,679
JBrowse link
postsynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cel carboxyl ester lipase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:7,134,021...7,141,522
Ensembl chr 3:7,134,021...7,141,522
JBrowse link
G Ephb2 Eph receptor B2 involved_in IMP
IDA
PMID:11136979 SynGO PMID:11136979, PMID:11136979 RGD:13702452, RGD:13702452 NCBI chr 5:155,024,478...155,143,539
Ensembl chr 5:155,022,493...155,204,456
JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:5295488|PMID:22038977)
UniProt
RGD
PMID:22038977 GO_REF:0000024 MGI:5295488 NCBI chr 3:80,362,643...80,416,684
Ensembl chr 3:80,362,858...80,416,679
JBrowse link
G Nlgn1 neuroligin 1 involved_in IBA
ISO
ISS
PMID:21873635
(MGI:2665153|PMID:12796785), (MGI:5284797|PMID:15620359)
GO_REF:0000024
RGD
BHF-UCL
PMID:12796785 PMID:15620359, PMID:21873635 GO_REF:0000024 MGI:2665153 MGI:5284797, RGD:13792537 NCBI chr 2:111,057,291...111,973,681
Ensembl chr 2:111,057,291...111,793,326
JBrowse link
G Nlgn2 neuroligin 2 involved_in ISS
ISO
IEA
IBA
GO_REF:0000024
(MGI:5284797|PMID:15620359)
GO_REF:0000107
PMID:21873635
BHF-UCL
RGD
Ensembl
PMID:15620359, PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:5284797, RGD:13792537 NCBI chr10:56,431,586...56,444,847
Ensembl chr10:56,431,573...56,444,847
JBrowse link
G Nlgn3 neuroligin 3 involved_in IBA
ISO
ISS
PMID:21873635
(MGI:5320268|PMID:21642956)
GO_REF:0000024
RGD
BHF-UCL
PMID:21642956, PMID:21873635 GO_REF:0000024 MGI:5320268, RGD:13792537 NCBI chr  X:71,199,390...71,227,460
Ensembl chr  X:71,199,491...71,222,732
JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5284797|PMID:15620359), (MGI:5285129|PMID:21424692)
BHF-UCL
RGD
PMID:15620359 PMID:21424692 GO_REF:0000024 MGI:5284797 MGI:5285129 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
G Nrxn2 neurexin 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5285129|PMID:21424692)
BHF-UCL
RGD
PMID:21424692 GO_REF:0000024 MGI:5285129 NCBI chr 1:221,792,191...221,908,047
Ensembl chr 1:221,792,221...221,908,049
JBrowse link
postsynaptic specialization assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in ISO (MGI:5284797|PMID:15620359) RGD PMID:15620359 MGI:5284797 NCBI chr 2:111,057,291...111,973,681
Ensembl chr 2:111,057,291...111,793,326
JBrowse link
G Nlgn2 neuroligin 2 involved_in ISO (MGI:4411943|PMID:19755106), (MGI:5284797|PMID:15620359) RGD PMID:15620359 PMID:19755106 MGI:4411943 MGI:5284797 NCBI chr10:56,431,586...56,444,847
Ensembl chr10:56,431,573...56,444,847
JBrowse link
G Nlgn3 neuroligin 3 involved_in IDA PMID:17897391 SynGO PMID:17897391 RGD:9831151 NCBI chr  X:71,199,390...71,227,460
Ensembl chr  X:71,199,491...71,222,732
JBrowse link
G Ntng2 netrin G2 involved_in ISO (MGI:3664681|PMID:16980967) RGD PMID:16980967 MGI:3664681 NCBI chr 3:7,742,511...7,800,834
Ensembl chr 3:7,742,531...7,796,385
JBrowse link
presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cadm1 cell adhesion molecule 1 involved_in ISO (MGI:2385986|PMID:12202822) RGD PMID:12202822 MGI:2385986 NCBI chr 8:51,858,906...52,200,591
Ensembl chr 8:52,127,399...52,189,722
JBrowse link
G Cntn5 contactin 5 involved_in IEA
ISO
GO_REF:0000107
(MGI:5635777|PMID:24411736)
Ensembl
RGD
PMID:24411736 GO_REF:0000107 MGI:5635777 NCBI chr 8:7,812,371...9,033,962
Ensembl chr 8:7,814,895...8,524,643
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in ISO (MGI:3653273|PMID:16818724) RGD PMID:16818724 MGI:3653273 NCBI chr 5:173,295,948...173,308,014
Ensembl chr 5:173,296,270...173,307,945
JBrowse link
G Efnb1 ephrin B1 involved_in IDA
IMP
PMID:19915143 SynGO PMID:19915143, PMID:19915143 RGD:13702172, RGD:13702172 NCBI chr  X:68,891,227...68,904,034
Ensembl chr  X:68,891,227...68,904,038
JBrowse link
G Efnb2 ephrin B2 involved_in IMP
IDA
PMID:19915143 SynGO PMID:19915143, PMID:19915143 RGD:13702172, RGD:13702172 NCBI chr16:86,631,151...86,672,050
Ensembl chr16:86,631,064...86,675,049
JBrowse link
G Fzd5 frizzled class receptor 5 involved_in IDA
EXP
IMP
PMID:20530549 SynGO PMID:20530549, PMID:20530549, PMID:20530549 RGD:13702329, RGD:13702329, RGD:13702329 NCBI chr 9:71,443,784...71,445,541
Ensembl chr 9:71,443,588...71,445,739
JBrowse link
G Lrrtm3 leucine rich repeat transmembrane neuronal 3 involved_in ISO (PMID:26776509) RGD PMID:26776509 NCBI chr20:25,990,304...26,163,656
Ensembl chr20:25,990,304...26,163,656
JBrowse link
G Nrxn1 neurexin 1 involved_in IMP
IDA
EXP
PMID:12796785 SynGO PMID:12796785, PMID:12796785, PMID:12796785 RGD:13702298, RGD:13702298, RGD:13702298 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
G Sdcbp syndecan binding protein involved_in IDA
IMP
PMID:19915143 SynGO PMID:19915143, PMID:19915143 RGD:13702172, RGD:13702172 NCBI chr 5:19,471,664...19,498,499
Ensembl chr 5:19,471,664...19,498,485
JBrowse link
presynaptic active zone assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsn bassoon (presynaptic cytomatrix protein) involved_in IDA
IBA
PMID:22875941
PMID:21873635
UniProt
GO_Central
PMID:22875941, PMID:21873635 RGD:14390063, RGD:13792537 NCBI chr 8:116,873,721...116,965,396
Ensembl chr 8:116,873,721...116,965,396
JBrowse link
G Pcdh17 protocadherin 17 acts_upstream_of_or_within ISO (MGI:5514320|PMID:23684785) RGD PMID:23684785 MGI:5514320 NCBI chr15:67,555,835...67,647,990
Ensembl chr15:67,555,835...67,645,088
JBrowse link
G Pclo piccolo (presynaptic cytomatrix protein) involved_in IBA
IDA
PMID:21873635
PMID:22875941
GO_Central
UniProt
PMID:21873635, PMID:22875941 RGD:13792537, RGD:14390063 NCBI chr 4:16,454,904...17,058,921
Ensembl chr 4:16,454,904...17,058,921
JBrowse link
presynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cel carboxyl ester lipase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:7,134,021...7,141,522
Ensembl chr 3:7,134,021...7,141,522
JBrowse link
G Il1rapl1 interleukin 1 receptor accessory protein-like 1 involved_in ISO (MGI:5294265|PMID:21940441) RGD PMID:21940441 MGI:5294265 NCBI chr  X:55,439,388...57,004,865
Ensembl chr  X:55,439,578...56,765,893
JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:5295488|PMID:22038977)
UniProt
RGD
PMID:22038977 GO_REF:0000024 MGI:5295488 NCBI chr 3:80,362,643...80,416,684
Ensembl chr 3:80,362,858...80,416,679
JBrowse link
G Nlgn1 neuroligin 1 involved_in IDA
ISO
IBA
PMID:19730411
(MGI:2665153|PMID:12796785), (MGI:3694190|PMID:10892652), (MGI:5284797|PMID:15620359)
PMID:15797875
PMID:21873635
RGD PMID:10892652 PMID:12796785 PMID:15620359, PMID:19730411, PMID:15797875, PMID:21873635 MGI:2665153 MGI:3694190 MGI:5284797, RGD:8554379, RGD:8554205, RGD:13792537 NCBI chr 2:111,057,291...111,973,681
Ensembl chr 2:111,057,291...111,793,326
JBrowse link
G Nlgn2 neuroligin 2 involved_in IBA
ISO
IEA
IDA
PMID:21873635
(MGI:4352827|PMID:19016888), (MGI:5284797|PMID:15620359)
GO_REF:0000107
PMID:15797875
RGD
Ensembl
PMID:15620359 PMID:19016888, PMID:21873635, PMID:15797875 GO_REF:0000107 MGI:4352827 MGI:5284797, RGD:13792537, RGD:8554205 NCBI chr10:56,431,586...56,444,847
Ensembl chr10:56,431,573...56,444,847
JBrowse link
G Nlgn3 neuroligin 3 involved_in IDA
IBA
PMID:15797875
PMID:21873635
BHF-UCL
GO_Central
PMID:15797875, PMID:21873635 RGD:8554205, RGD:13792537 NCBI chr  X:71,199,390...71,227,460
Ensembl chr  X:71,199,491...71,222,732
JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:2665153|PMID:12796785)
BHF-UCL
RGD
PMID:12796785 GO_REF:0000024 MGI:2665153 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3772418|PMID:18082964) RGD PMID:18082964 MGI:3772418 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in ISO (MGI:5294265|PMID:21940441) RGD PMID:21940441 MGI:5294265 NCBI chr 5:92,862,229...93,514,071
Ensembl chr 5:92,862,267...93,244,202
JBrowse link
regulation of bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F11r F11 receptor involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr13:89,826,272...89,850,151
Ensembl chr13:89,826,254...89,850,612
JBrowse link
G Fzd5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3583769 (MGI:5494335|PMID:23610556)
Ensembl
RGD
PMID:23610556 GO_REF:0000107 MGI:5494335 NCBI chr 9:71,443,784...71,445,541
Ensembl chr 9:71,443,588...71,445,739
JBrowse link
G Gja1 gap junction protein, alpha 1 IMP RGD PMID:19509333 RGD:6784505 NCBI chr20:37,876,650...37,889,097
Ensembl chr20:37,876,650...37,889,089
JBrowse link
G Gpbar1 G protein-coupled bile acid receptor 1 involved_in ISO (MGI:5297273|PMID:22046243) RGD PMID:22046243 MGI:5297273 NCBI chr 9:81,555,914...81,560,931
Ensembl chr 9:81,559,605...81,560,594
JBrowse link
G Myo1c myosin 1C involved_in ISO (PMID:21402783) RGD PMID:21402783 NCBI chr10:63,803,311...63,819,614
Ensembl chr10:63,803,309...63,819,614
JBrowse link
G Nedd4l NEDD4 like E3 ubiquitin protein ligase acts_upstream_of_or_within ISO (MGI:4819049|PMID:20504882) RGD PMID:20504882 MGI:4819049 NCBI chr18:60,392,376...60,719,720
Ensembl chr18:60,392,376...60,719,720
JBrowse link
G Pkp2 plakophilin 2 IMP RGD PMID:19509333 RGD:6784505 NCBI chr11:88,912,163...88,972,213 JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in ISO
IEA
(PMID:15905176)
GO_REF:0000107
RGD
Ensembl
PMID:15905176 GO_REF:0000107 NCBI chr19:25,095,089...25,118,869
Ensembl chr19:25,095,089...25,118,860
JBrowse link
G Prkch protein kinase C, eta involved_in ISO
ISS
(PMID:19114660)
GO_REF:0000024
RGD
UniProt
PMID:19114660 GO_REF:0000024 NCBI chr 6:96,479,243...96,677,368
Ensembl chr 6:96,479,430...96,676,225
JBrowse link
G Snai1 snail family transcriptional repressor 1 involved_in ISO (PMID:15314165) RGD PMID:15314165 NCBI chr 3:164,274,710...164,279,199
Ensembl chr 3:164,274,710...164,279,378
JBrowse link
G Snai2 snail family transcriptional repressor 2 involved_in ISO (PMID:15314165) RGD PMID:15314165 NCBI chr11:90,404,421...90,406,730
Ensembl chr11:90,403,333...90,406,797
JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr 1:126,146,489...126,515,359
Ensembl chr 1:126,146,489...126,227,469
JBrowse link
regulation of cell junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rap1a RAP1A, member of RAS oncogene family involved_in ISS
ISO
GO_REF:0000024
(PMID:21840392)
UniProt
RGD
PMID:21840392 GO_REF:0000024 NCBI chr 2:208,193,950...208,215,186
Ensembl chr 2:208,193,954...208,215,187
JBrowse link
G Rap1b RAP1B, member of RAS oncogene family involved_in ISO
ISS
(PMID:21840392)
GO_REF:0000024
RGD
UniProt
PMID:21840392 GO_REF:0000024 NCBI chr 7:60,850,406...60,878,226
Ensembl chr 7:60,853,930...60,860,990
JBrowse link
G Rapgef1 Rap guanine nucleotide exchange factor 1 involved_in ISO (PMID:21840392) RGD PMID:21840392 NCBI chr 3:8,189,594...8,307,077
Ensembl chr 3:8,192,575...8,304,976
JBrowse link
G Rapgef2 Rap guanine nucleotide exchange factor 2 involved_in ISO
ISS
(PMID:21840392)
GO_REF:0000024
RGD
UniProt
PMID:21840392 GO_REF:0000024 NCBI chr 2:177,836,191...178,057,378
Ensembl chr 2:177,836,202...178,057,157
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:1,273,490...1,390,790
Ensembl chr18:1,273,453...1,390,190
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:42,180,864...42,289,910
Ensembl chr 6:42,180,894...42,289,908
JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr 1:126,146,489...126,515,359
Ensembl chr 1:126,146,489...126,227,469
JBrowse link
regulation of focal adhesion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actg1 actin, gamma 1 involved_in ISO (PMID:25705373) RGD PMID:25705373 NCBI chr10:109,518,429...109,521,288
Ensembl chr 3:75,643,054...75,644,954
Ensembl chr10:75,643,054...75,644,954
JBrowse link
G Camsap3 calmodulin regulated spectrin-associated protein family, member 3 involved_in ISO (PMID:27693509) RGD PMID:27693509 NCBI chr12:2,133,935...2,157,403
Ensembl chr12:2,134,022...2,157,403
JBrowse link
G Clasp1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr13:34,365,038...34,584,651
Ensembl chr13:34,365,147...34,584,651
JBrowse link
G Coro1c coronin 1C involved_in ISO UniProtKB:Q05397 (PMID:19913511) RGD PMID:19913511 NCBI chr12:48,481,741...48,554,054
Ensembl chr12:48,481,750...48,554,052
JBrowse link
G Dapk3 death-associated protein kinase 3 involved_in ISO (PMID:23454120) RGD PMID:23454120 NCBI chr 7:11,392,436...11,400,855
Ensembl chr 7:11,392,437...11,400,805
JBrowse link
G Dusp3 dual specificity phosphatase 3 involved_in ISO (PMID:28759036)
(MGI:6101044|PMID:28759036)
RGD PMID:28759036 MGI:6101044 NCBI chr10:89,904,578...89,918,296
Ensembl chr10:89,904,560...89,918,427
JBrowse link
G Efna5 ephrin A5 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:11870224)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:11870224 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:110,054,002...110,329,878
Ensembl chr 9:110,057,155...110,225,486
JBrowse link
G Epha3 Eph receptor A3 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:11870224)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:11870224 GO_REF:0000024 GO_REF:0000107 NCBI chr11:421,253...783,037
Ensembl chr11:421,135...782,954
JBrowse link
G Gpm6b glycoprotein m6b involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:21638316)
Ensembl
UniProt
RGD
PMID:21638316 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:29,604,607...29,751,174
Ensembl chr  X:29,607,075...29,648,403
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO (MGI:3834346|PMID:17077323) RGD PMID:17077323 MGI:3834346 NCBI chr 3:105,203,309...105,214,989
Ensembl chr 3:105,203,309...105,214,989
JBrowse link
G Ldb1 LIM domain binding 1 involved_in ISO (MGI:5751678|PMID:19675209) RGD PMID:19675209 MGI:5751678 NCBI chr 1:265,772,729...265,798,442
Ensembl chr 1:265,785,409...265,798,167
JBrowse link
G Limch1 LIM and calponin homology domains 1 involved_in ISO
IBA
(PMID:28228547)
PMID:21873635
RGD PMID:28228547, PMID:21873635 RGD:13792537 NCBI chr14:42,760,363...43,072,976
Ensembl chr14:42,762,587...43,072,843
JBrowse link
G LOC680875 similar to dystonin isoform 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:117,180,653...117,187,739
Ensembl chr 7:117,180,812...117,187,367
JBrowse link
G Macf1 microtubule-actin crosslinking factor 1 involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:3828223|PMID:18854161)
(PMID:27693509)
PMID:21873635
UniProt
RGD
PMID:18854161 PMID:27693509, PMID:21873635 GO_REF:0000024 MGI:3828223, RGD:13792537 NCBI chr 5:141,039,455...141,363,524
Ensembl chr 5:141,039,468...141,363,524
JBrowse link
G Peak1 pseudopodium-enriched atypical kinase 1 involved_in ISO (PMID:23105102) RGD PMID:23105102 NCBI chr 8:60,861,742...61,080,128
Ensembl chr 8:60,867,819...61,079,526
JBrowse link
G Ptk2 protein tyrosine kinase 2 involved_in ISO
IEA
UniProtKB:Q9ULV4 (PMID:19913511)
GO_REF:0000107
RGD
Ensembl
PMID:19913511 GO_REF:0000107 NCBI chr 7:114,436,419...114,611,317
Ensembl chr 7:114,437,361...114,590,119
JBrowse link
G Ptpra protein tyrosine phosphatase, receptor type, A involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5442237|PMID:22801373)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:22801373 GO_REF:0000024 GO_REF:0000107 MGI:5442237 NCBI chr 3:122,976,066...123,084,585
Ensembl chr 3:122,976,104...123,084,863
JBrowse link
G Rhod ras homolog family member D involved_in ISO (MGI:5512821|PMID:23454120) RGD PMID:23454120 MGI:5512821 NCBI chr 1:219,668,352...219,682,287
Ensembl chr 1:219,668,352...219,682,287
JBrowse link
G Slk STE20-like kinase involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:23128389)
UniProt
Ensembl
RGD
PMID:23128389 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:267,359,761...267,415,735
Ensembl chr 1:267,359,830...267,412,810
JBrowse link
G Tsc1 TSC complex subunit 1 IMP RGD PMID:15611338 RGD:1601406 NCBI chr 3:7,219,955...7,269,063
Ensembl chr 3:7,237,192...7,265,145
JBrowse link
G Vcl vinculin involved_in IEA
ISO
GO_REF:0000107
(PMID:26923917)
Ensembl
RGD
PMID:26923917 GO_REF:0000107 NCBI chr15:3,455,211...3,544,738
Ensembl chr15:3,455,211...3,544,702
JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5558098 (MGI:5544506|PMID:24302887)
Ensembl
RGD
PMID:24302887 GO_REF:0000107 MGI:5544506 NCBI chr14:106,393,959...106,759,511
Ensembl chr14:106,393,959...106,759,505
JBrowse link
regulation of gap junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aplnr apelin receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5584055|PMID:23603510)
Ensembl
RGD
PMID:23603510 GO_REF:0000107 MGI:5584055 NCBI chr 3:72,540,538...72,544,183
Ensembl chr 3:72,540,538...72,544,182
JBrowse link
regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhfpl4 LHFPL tetraspan subfamily member 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:6201911|PMID:29742426)
UniProt
RGD
PMID:29742426 GO_REF:0000024 MGI:6201911 NCBI chr 4:145,117,533...145,147,397
Ensembl chr 4:145,117,533...145,147,397
JBrowse link
regulation of postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi3bp ABI family member 3 binding protein involved_in IMP PMID:22485184 ARUK-UCL PMID:22485184 RGD:42721990 NCBI chr11:46,206,932...46,422,791
Ensembl chr11:46,208,075...46,369,577
JBrowse link
G Cbln1 cerebellin 1 precursor involved_in ISO (MGI:4441214|PMID:20395510) RGD PMID:20395510 MGI:4441214 NCBI chr19:20,607,507...20,611,316
Ensembl chr19:20,607,507...20,611,316
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:4441214|PMID:20395510)
Ensembl
RGD
PMID:20395510 GO_REF:0000107 MGI:4441214 NCBI chr 4:94,068,112...95,476,864
Ensembl chr 4:94,696,965...95,442,778
JBrowse link
G Il1rap interleukin 1 receptor accessory protein involved_in IEA
ISO
GO_REF:0000107
(MGI:5315316|PMID:22357843)
Ensembl
RGD
PMID:22357843 GO_REF:0000107 MGI:5315316 NCBI chr11:77,456,648...77,593,208
Ensembl chr11:77,463,954...77,593,207
JBrowse link
G Lrfn1 leucine rich repeat and fibronectin type III domain containing 1 involved_in IMP
IDA
PMID:16630835 SynGO PMID:16630835, PMID:16630835 RGD:13702351, RGD:13702351 NCBI chr 1:85,290,887...85,308,498
Ensembl chr 1:85,291,462...85,300,825
JBrowse link
G Lrfn4 leucine rich repeat and fibronectin type III domain containing 4 involved_in IBA
IMP
IDA
PMID:21873635
PMID:20410109
GO_Central
SynGO
PMID:21873635, PMID:20410109, PMID:20410109 RGD:13792537, RGD:13702463, RGD:13702463 NCBI chr 1:219,850,037...219,855,771
Ensembl chr 1:219,850,037...219,853,329
JBrowse link
G Lrrc4b leucine rich repeat containing 4B involved_in IMP
IBA
IDA
PMID:19252495
PMID:21873635
SynGO
GO_Central
PMID:19252495, PMID:21873635, PMID:19252495 RGD:13702321, RGD:13792537, RGD:13702321 NCBI chr 1:100,434,418...100,468,914
Ensembl chr 1:100,447,998...100,468,868
JBrowse link
G LRRTM1 leucine rich repeat transmembrane neuronal 1 involved_in IMP
IDA
PMID:19285470 SynGO PMID:19285470, PMID:19285470 RGD:8554788, RGD:8554788 NCBI chr 4:108,300,927...108,316,373
Ensembl chr 4:108,301,129...108,316,373
JBrowse link
G Lrrtm2 leucine rich repeat transmembrane neuronal 2 involved_in IDA
IMP
PMID:19285470 SynGO PMID:19285470, PMID:19285470 RGD:8554788, RGD:8554788 NCBI chr18:28,012,877...28,017,925
Ensembl chr18:28,012,877...28,017,925
JBrowse link
G Nptx1 neuronal pentraxin 1 involved_in IDA
EXP
IMP
PMID:29024665 SynGO PMID:29024665, PMID:29024665, PMID:29024665 RGD:13702141, RGD:13702141, RGD:13702141 NCBI chr10:108,682,637...108,691,592
Ensembl chr10:108,682,638...108,691,367
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (MGI:5294741|PMID:21410790) RGD PMID:21410790 MGI:5294741 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 involved_in EXP
IDA
PMID:21262467 SynGO PMID:21262467, PMID:21262467 RGD:13702219, RGD:13702219 NCBI chr 1:139,890,537...140,262,503
Ensembl chr 1:139,890,560...140,262,503
JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in EXP
ISO
IDA
PMID:29024665
(MGI:5315316|PMID:22357843)
RGD PMID:22357843, PMID:29024665, PMID:29024665 MGI:5315316, RGD:13702141, RGD:13702141 NCBI chr 5:92,862,229...93,514,071
Ensembl chr 5:92,862,267...93,244,202
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in IDA
ISO
IMP
EXP
IEA
PMID:21262467
(MGI:4887276|PMID:21262467)
GO_REF:0000107
RGD
Ensembl
PMID:21262467, PMID:21262467, PMID:21262467, PMID:21262467 GO_REF:0000107 MGI:4887276, RGD:13702219, RGD:13702219, RGD:13702219 NCBI chr 9:10,585,360...10,646,205
Ensembl chr 9:10,603,813...10,645,939
JBrowse link
G Sipa1l1 signal-induced proliferation-associated 1 like 1 involved_in IMP
IDA
PMID:11502259 SynGO PMID:11502259, PMID:11502259 RGD:8554032, RGD:8554032 NCBI chr 6:106,052,212...106,163,249
Ensembl chr 6:106,039,991...106,163,302
JBrowse link
regulation of postsynaptic specialization assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef9 Cdc42 guanine nucleotide exchange factor 9 involved_in ISO (MGI:3722960|PMID:17690689) RGD PMID:17690689 MGI:3722960 NCBI chr  X:64,249,576...64,428,444
Ensembl chr  X:64,248,278...64,428,592
JBrowse link
G Gap43 growth associated protein 43 involved_in IDA
IMP
PMID:25755278 SynGO PMID:25755278, PMID:25755278 RGD:13702431, RGD:13702431 NCBI chr11:58,624,198...58,717,916
Ensembl chr11:58,624,198...58,717,914
JBrowse link
G Nptxr neuronal pentraxin receptor involved_in ISO (MGI:6189241|PMID:27986928) RGD PMID:27986928 MGI:6189241 NCBI chr 7:121,011,678...121,029,754
Ensembl chr 7:121,011,680...121,029,754
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (MGI:5284797|PMID:15620359) RGD PMID:15620359 MGI:5284797 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
G Numb NUMB, endocytic adaptor protein involved_in IDA
IMP
PMID:16394100 SynGO PMID:16394100, PMID:16394100 RGD:2302413, RGD:2302413 NCBI chr 6:107,279,917...107,325,345
Ensembl chr 6:107,279,920...107,325,345
JBrowse link
regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in ISO (PMID:19726636) RGD PMID:19726636 NCBI chr11:24,425,013...24,641,872
Ensembl chr11:24,425,005...24,641,858
JBrowse link
G Arf6 ADP-ribosylation factor 6 involved_in IMP
IDA
PMID:16672654 SynGO PMID:16672654, PMID:16672654 RGD:8554141, RGD:8554141 NCBI chr 6:91,697,109...91,698,257
Ensembl chr 6:91,697,109...91,698,255
JBrowse link
G Cbln1 cerebellin 1 precursor involved_in ISO (MGI:4441214|PMID:20395510), (MGI:5294741|PMID:21410790) RGD PMID:20395510 PMID:21410790 MGI:4441214 MGI:5294741 NCBI chr19:20,607,507...20,611,316
Ensembl chr19:20,607,507...20,611,316
JBrowse link
G Cbln2 cerebellin 2 precursor involved_in ISO (MGI:5294741|PMID:21410790) RGD PMID:21410790 MGI:5294741 NCBI chr18:83,775,568...83,783,841
Ensembl chr18:83,777,665...83,782,930
JBrowse link
G Clstn3 calsyntenin 3 involved_in IEA
ISO
GO_REF:0000107
(MGI:5576449|PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 MGI:5576449 NCBI chr 4:157,044,736...157,078,013
Ensembl chr 4:157,043,925...157,078,130
JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma, 1 involved_in ISO UniProtKB:Q21053 (PMID:25533483) RGD PMID:25533483 NCBI chr11:83,907,659...83,927,683
Ensembl chr11:83,908,109...83,926,524
JBrowse link
G Farp1 FERM, ARH/RhoGEF and pleckstrin domain protein 1 involved_in IMP
IDA
PMID:23209303 SynGO PMID:23209303, PMID:23209303 RGD:8554251, RGD:8554251 NCBI chr15:106,375,298...106,625,837
Ensembl chr15:106,434,177...106,625,837
JBrowse link
G Fzd1 frizzled class receptor 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:6189468|PMID:19883499)
Ensembl
RGD
PMID:19883499 GO_REF:0000107 MGI:6189468 NCBI chr 4:26,470,864...26,475,262
Ensembl chr 4:26,470,864...26,475,262
JBrowse link
G Gpc4 glypican 4 involved_in IDA
IBA
IMP
PMID:23911103
PMID:21873635
SynGO
GO_Central
PMID:23911103, PMID:21873635, PMID:23911103 RGD:13702303, RGD:13792537, RGD:13702303 NCBI chr  X:139,354,325...139,464,876
Ensembl chr  X:139,354,155...139,464,798
JBrowse link
G Gpc6 glypican 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:102,164,091...103,174,721
Ensembl chr15:102,164,751...103,170,847
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in IDA
IMP
PMID:21410790
PMID:20395510
SynGO PMID:21410790, PMID:21410790, PMID:20395510, PMID:20395510 RGD:13702257, RGD:13702257, RGD:13702347, RGD:13702347 NCBI chr 4:94,068,112...95,476,864
Ensembl chr 4:94,696,965...95,442,778
JBrowse link
G Il1rap interleukin 1 receptor accessory protein involved_in IEA
ISO
GO_REF:0000107
(MGI:5315316|PMID:22357843)
Ensembl
RGD
PMID:22357843 GO_REF:0000107 MGI:5315316 NCBI chr11:77,456,648...77,593,208
Ensembl chr11:77,463,954...77,593,207
JBrowse link
G Il1rapl1 interleukin 1 receptor accessory protein-like 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:21926414)
Ensembl
RGD
PMID:21926414 GO_REF:0000107 NCBI chr  X:55,439,388...57,004,865
Ensembl chr  X:55,439,578...56,765,893
JBrowse link
G Il1rapl2 interleukin 1 receptor accessory protein-like 2 involved_in ISO (PMID:21926414) RGD PMID:21926414 NCBI chr  X:108,287,034...109,851,075
Ensembl chr  X:108,287,068...109,851,047
JBrowse link
G Lrfn3 leucine rich repeat and fibronectin type III domain containing 3 involved_in IMP
IDA
PMID:27480238 SynGO PMID:27480238, PMID:27480238 RGD:13702184, RGD:13702184 NCBI chr 1:88,819,439...88,827,002
Ensembl chr 1:88,819,445...88,826,302
JBrowse link
G Lrfn4 leucine rich repeat and fibronectin type III domain containing 4 involved_in IBA
ISO
PMID:21873635
(MGI:4836132|PMID:20410109)
RGD PMID:20410109, PMID:21873635 MGI:4836132, RGD:13792537 NCBI chr 1:219,850,037...219,855,771
Ensembl chr 1:219,850,037...219,853,329
JBrowse link
G Lrfn5 leucine rich repeat and fibronectin type III domain containing 5 involved_in IBA
ISO
PMID:21873635
(MGI:4836132|PMID:20410109)
RGD PMID:20410109, PMID:21873635 MGI:4836132, RGD:13792537 NCBI chr 6:83,082,593...83,438,601
Ensembl chr 6:83,083,740...83,438,601
JBrowse link
G Lrrc4b leucine rich repeat containing 4B involved_in IDA
IBA
IMP
PMID:19252495
PMID:21873635
SynGO
GO_Central
PMID:19252495, PMID:21873635, PMID:19252495 RGD:13702321, RGD:13792537, RGD:13702321 NCBI chr 1:100,434,418...100,468,914
Ensembl chr 1:100,447,998...100,468,868
JBrowse link
G LRRTM1 leucine rich repeat transmembrane neuronal 1 involved_in IDA
IMP
PMID:19285470 SynGO PMID:19285470, PMID:19285470 RGD:8554788, RGD:8554788 NCBI chr 4:108,300,927...108,316,373
Ensembl chr 4:108,301,129...108,316,373
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO
IEA
(PMID:28641112)
GO_REF:0000107
RGD
Ensembl
PMID:28641112 GO_REF:0000107 NCBI chr20:8,515,142...8,574,632
Ensembl chr20:8,515,142...8,574,082
JBrowse link
G Mdga2 MAM domain containing glycosylphosphatidylinositol anchor 2 involved_in ISO (MGI:6109768|PMID:27608760) RGD PMID:27608760 MGI:6109768 NCBI chr 6:88,442,620...89,292,454
Ensembl chr 6:88,447,749...88,917,070
JBrowse link
G Nlgn2 neuroligin 2 involved_in IMP
IDA
PMID:10892652 SynGO PMID:10892652, PMID:10892652 RGD:13702379, RGD:13702379 NCBI chr10:56,431,586...56,444,847
Ensembl chr10:56,431,573...56,444,847
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (MGI:5294741|PMID:21410790), (MGI:6189347|PMID:17360903) RGD PMID:17360903 PMID:21410790 MGI:5294741 MGI:6189347 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
G Ntng2 netrin G2 involved_in ISO (MGI:3664681|PMID:16980967) RGD PMID:16980967 MGI:3664681 NCBI chr 3:7,742,511...7,800,834
Ensembl chr 3:7,742,531...7,796,385
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 involved_in IDA
IMP
PMID:21262467 SynGO PMID:21262467, PMID:21262467 RGD:13702219, RGD:13702219 NCBI chr 1:139,890,537...140,262,503
Ensembl chr 1:139,890,560...140,262,503
JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in ISO (PMID:21926414) RGD PMID:21926414 NCBI chr 5:92,862,229...93,514,071
Ensembl chr 5:92,862,267...93,244,202
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in EXP
IDA
IMP
PMID:21262467 SynGO PMID:21262467, PMID:21262467, PMID:21262467 RGD:13702219, RGD:13702219, RGD:13702219 NCBI chr 9:10,585,360...10,646,205
Ensembl chr 9:10,603,813...10,645,939
JBrowse link
G Slitrk1 SLIT and NTRK-like family, member 1 involved_in ISO (PMID:23345436) RGD PMID:23345436 NCBI chr15:93,303,382...93,307,420
Ensembl chr15:93,303,382...93,307,420
JBrowse link
G Slitrk2 SLIT and NTRK-like family, member 2 involved_in ISO (PMID:23345436) RGD PMID:23345436 NCBI chr  X:151,099,388...151,111,816
Ensembl chr  X:151,103,576...151,107,016
JBrowse link
G Slitrk3 SLIT and NTRK-like family, member 3 involved_in ISO (PMID:23345436)
(MGI:5776681|PMID:22286174)
RGD PMID:22286174 PMID:23345436 MGI:5776681 NCBI chr 2:170,446,582...170,461,513
Ensembl chr 2:170,452,702...170,460,754
JBrowse link
G Slitrk5 SLIT and NTRK-like family, member 5 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:96,817,907...96,826,760
Ensembl chr15:96,821,832...96,826,653
JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:95,507,632...95,514,259
Ensembl chr15:95,507,640...95,514,259
JBrowse link
G Snca synuclein alpha involved_in ISO UniProtKB:Q21053 (PMID:25533483) RGD PMID:25533483 NCBI chr 4:90,782,412...90,883,236
Ensembl chr 4:90,782,374...90,882,285
JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (PMID:19883499) RGD PMID:19883499 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:20530549) RGD PMID:20530549 NCBI chr 4:122,994,425...123,040,609
Ensembl chr 4:122,994,425...123,040,609
JBrowse link
regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrb1 adhesion G protein-coupled receptor B1 involved_in IMP
IDA
PMID:23595754 SynGO PMID:23595754, PMID:23595754 RGD:13831359, RGD:13831359 NCBI chr 7:115,766,484...115,828,514 JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO MGI:2158714 (MGI:3699474|PMID:17301182) RGD PMID:17301182 MGI:3699474 NCBI chr 2:189,088,570...189,096,785
Ensembl chr 2:189,088,570...189,096,785
JBrowse link
G Ephb2 Eph receptor B2 involved_in ISO (MGI:3693132|PMID:17122040) RGD PMID:17122040 MGI:3693132 NCBI chr 5:155,024,478...155,143,539
Ensembl chr 5:155,022,493...155,204,456
JBrowse link
G Ghsr growth hormone secretagogue receptor acts_upstream_of_or_within ISO MGI:3040440 (MGI:3696310|PMID:17060947) RGD PMID:17060947 MGI:3696310 NCBI chr 2:113,065,953...113,071,265
Ensembl chr 2:113,066,885...113,070,261
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO MGI:2655232|MGI:2655237 (MGI:2654367|PMID:12657691) RGD PMID:12657691 MGI:2654367 NCBI chr 3:2,507,745...2,534,664
Ensembl chr 3:2,506,896...2,534,663
JBrowse link
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 involved_in ISO (MGI:5515243|PMID:23911103) RGD PMID:23911103 MGI:5515243 NCBI chr 4:110,699,577...111,497,643
Ensembl chr 4:110,699,557...111,497,643
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO (MGI:3804504|PMID:18599438) RGD PMID:18599438 MGI:3804504 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Nectin1 nectin cell adhesion molecule 1 IMP RGD PMID:11827984 RGD:1599809 NCBI chr 8:48,094,233...48,198,499
Ensembl chr 8:48,094,673...48,157,305
JBrowse link
G Negr1 neuronal growth regulator 1 IMP RGD PMID:18602091 RGD:40886282 NCBI chr 2:262,914,240...263,650,441
Ensembl chr 2:262,914,327...263,650,441
JBrowse link
G Nrg2 neuregulin 2 involved_in IDA
IMP
PMID:26674872 SynGO PMID:26674872, PMID:26674872 RGD:11070025, RGD:11070025 NCBI chr18:28,835,391...29,015,552
Ensembl chr18:28,835,417...29,015,552
JBrowse link
G Ntn1 netrin 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5538415|PMID:24174661)
Ensembl
RGD
PMID:24174661 GO_REF:0000107 MGI:5538415 NCBI chr10:54,761,925...54,982,072
Ensembl chr10:54,761,871...54,967,585
JBrowse link
G Pdlim5 PDZ and LIM domain 5 involved_in IDA PMID:19900557 UniProt PMID:19900557 RGD:8554803 NCBI chr 2:247,815,214...247,989,198
Ensembl chr 2:247,818,243...247,988,462
JBrowse link
G Ppp1r9a protein phosphatase 1, regulatory subunit 9A IMP RGD PMID:15473970 RGD:10043779 NCBI chr 4:29,976,485...30,247,371
Ensembl chr 4:29,978,739...30,241,911
JBrowse link
G Rab17 RAB17, member RAS oncogene family involved_in ISO (MGI:5487509|PMID:22291024) RGD PMID:22291024 MGI:5487509 NCBI chr 9:98,118,907...98,131,883
Ensembl chr 9:98,118,908...98,131,883
JBrowse link
G Setd5 SET domain containing 5 involved_in ISO (MGI:6381850|PMID:31515109) RGD PMID:31515109 MGI:6381850 NCBI chr 4:145,017,549...145,095,247
Ensembl chr 4:145,017,608...145,095,245
JBrowse link
G Snap25 synaptosome associated protein 25 IEP RGD PMID:15478103 RGD:1581079 NCBI chr 3:129,697,408...129,788,417
Ensembl chr 3:129,599,353...129,788,400
JBrowse link
regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrn agrin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2136176 (MGI:1891559|PMID:11018052)
Ensembl
RGD
PMID:11018052 GO_REF:0000107 MGI:1891559 NCBI chr 5:173,589,910...173,622,813
Ensembl chr 5:173,589,819...173,622,645
JBrowse link
G Colq collagen like tail subunit of asymmetric acetylcholinesterase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857733 (MGI:4431306|PMID:20053883)
Ensembl
RGD
PMID:20053883 GO_REF:0000107 MGI:4431306 NCBI chr16:7,626,380...7,681,621
Ensembl chr16:7,627,603...7,681,576
JBrowse link
G Musk muscle associated receptor tyrosine kinase involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1929066 (MGI:80613|PMID:8653786)
UniProt
RGD
PMID:8653786 GO_REF:0000024 MGI:80613 NCBI chr 5:75,392,790...75,498,694
Ensembl chr 5:75,392,790...75,498,694
JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within ISO MGI:106034 (MGI:5298278|PMID:21884692) RGD PMID:21884692 MGI:5298278 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Six4 SIX homeobox 4 acts_upstream_of_or_within ISO MGI:102780 (MGI:5298278|PMID:21884692) RGD PMID:21884692 MGI:5298278 NCBI chr 6:95,984,868...95,999,709
Ensembl chr 6:95,984,868...95,998,529
JBrowse link
slit diaphragm assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptpro protein tyrosine phosphatase, receptor type, O involved_in ISS
ISO
GO_REF:0000024
(MGI:1927435|PMID:11086029)
UniProt
RGD
PMID:11086029 GO_REF:0000024 MGI:1927435 NCBI chr 4:171,250,766...171,461,571
Ensembl chr 4:171,250,818...171,461,677
JBrowse link
synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ache acetylcholinesterase IMP RGD PMID:12799140 RGD:1299197 NCBI chr12:22,472,358...22,477,052
Ensembl chr12:22,472,358...22,478,753
JBrowse link
G Add2 adducin 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:5140673|PMID:21435558)
Ensembl
RGD
PMID:21435558 GO_REF:0000107 MGI:5140673 NCBI chr 4:117,691,294...117,887,556
Ensembl chr 4:117,743,710...117,882,464
JBrowse link
G Adgrf1 adhesion G protein-coupled receptor F1 acts_upstream_of_or_within ISO MGI:4362398 (MGI:5883674|PMID:27759003) RGD PMID:27759003 MGI:5883674 NCBI chr 9:20,343,730...20,378,686 JBrowse link
G Adgrl3 adhesion G protein-coupled receptor L3 involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:5688833|PMID:22405201)
PMID:21873635
UniProt
RGD
PMID:22405201, PMID:21873635 GO_REF:0000024 MGI:5688833, RGD:13792537 NCBI chr14:28,362,176...29,226,085
Ensembl chr14:28,393,394...28,967,980
JBrowse link
G Agrn agrin IMP RGD PMID:12486121 RGD:1578367 NCBI chr 5:173,589,910...173,622,813
Ensembl chr 5:173,589,819...173,622,645
JBrowse link
G Bdnf brain-derived neurotrophic factor involved_in ISO
IEA
(PMID:19036963)
GO_REF:0000107
RGD
Ensembl
PMID:19036963 GO_REF:0000107 NCBI chr 3:100,768,637...100,819,216
Ensembl chr 3:100,768,637...100,819,210
JBrowse link
G Bsn bassoon (presynaptic cytomatrix protein) involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:116,873,721...116,965,396
Ensembl chr 8:116,873,721...116,965,396
JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO MGI:1856211|MGI:2181384 (MGI:1337561|PMID:10336181), (MGI:3042538|PMID:14973254) RGD PMID:10336181 PMID:14973254 MGI:1337561 MGI:3042538 NCBI chr19:25,453,236...25,749,550
Ensembl chr19:25,526,751...25,749,550
JBrowse link
G Cadm1 cell adhesion molecule 1 acts_upstream_of_or_within
involved_in
ISO (MGI:2385986|PMID:12202822)
(MGI:4879065|PMID:21145003)
RGD PMID:12202822 PMID:21145003 MGI:2385986 MGI:4879065 NCBI chr 8:51,858,906...52,200,591
Ensembl chr 8:52,127,399...52,189,722
JBrowse link
G Cdh1 cadherin 1 involved_in IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:12123610, PMID:21873635 RGD:632466, RGD:13792537 NCBI chr19:38,768,467...38,838,395
Ensembl chr19:38,768,467...38,838,395
JBrowse link
G Cdh2 cadherin 2 involved_in IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:12125071, PMID:21873635 RGD:632477, RGD:13792537 NCBI chr18:8,146,971...8,366,037
Ensembl chr18:8,146,971...8,360,684
JBrowse link
G Cdh9 cadherin 9 involved_in IMP
ISO
PMID:21867881
(MGI:5914212|PMID:21867881)
RGD PMID:21867881, PMID:21867881 MGI:5914212, RGD:13432233 NCBI chr 2:66,938,796...67,078,897
Ensembl chr 2:66,940,057...67,078,784
JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO (MGI:4941854|PMID:18054859) RGD PMID:18054859 MGI:4941854 NCBI chr 4:7,282,945...7,287,427
Ensembl chr 4:7,282,948...7,288,383
JBrowse link
G Clstn3 calsyntenin 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5521290 (MGI:5516394|PMID:24094106)
Ensembl
RGD
PMID:24094106 GO_REF:0000107 MGI:5516394 NCBI chr 4:157,044,736...157,078,013
Ensembl chr 4:157,043,925...157,078,130
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein involved_in ISO (MGI:4837546|PMID:21041412) RGD PMID:21041412 MGI:4837546 NCBI chr11:87,338,606...87,356,644
Ensembl chr11:87,778,312...87,815,043
JBrowse link
G Dbnl drebrin-like involved_in ISS
ISO
GO_REF:0000024
(MGI:5486540|PMID:18829961)
UniProt
RGD
PMID:18829961 GO_REF:0000024 MGI:5486540 NCBI chr14:86,029,335...86,044,364
Ensembl chr14:86,029,335...86,044,364
JBrowse link
G Dnm3 dynamin 3 involved_in IDA PMID:15741233 UniProt PMID:15741233 RGD:8554738 NCBI chr13:79,906,711...80,379,967
Ensembl chr13:79,910,382...80,379,929
JBrowse link
G Drd1 dopamine receptor D1 involved_in IEP PMID:10051231 BHF-UCL PMID:10051231 RGD:8554073 NCBI chr17:11,099,736...11,104,352
Ensembl chr17:11,101,306...11,103,541
JBrowse link
G Drd2 dopamine receptor D2 involved_in IEP PMID:10051231 BHF-UCL PMID:10051231 RGD:8554073 NCBI chr 8:53,678,777...53,743,643
Ensembl chr 8:53,678,777...53,743,642
JBrowse link
G Dscam DS cell adhesion molecule involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr11:37,004,776...37,599,866
Ensembl chr11:37,004,902...37,253,776
JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 involved_in IEA
ISO
GO_REF:0000107
(MGI:4443139|PMID:20393464)
Ensembl
RGD
PMID:20393464 GO_REF:0000107 MGI:4443139 NCBI chr 9:75,021,790...76,178,936
Ensembl chr 9:75,021,790...75,528,644
JBrowse link
G Erc2 ELKS/RAB6-interacting/CAST family member 2 involved_in NAS PMID:12163476 UniProt PMID:12163476 RGD:1299401 NCBI chr16:3,258,580...4,283,592
Ensembl chr16:3,293,599...3,679,222
JBrowse link
G Farp1 FERM, ARH/RhoGEF and pleckstrin domain protein 1 involved_in IMP PMID:23209303 UniProt PMID:23209303 RGD:8554251 NCBI chr15:106,375,298...106,625,837
Ensembl chr15:106,434,177...106,625,837
JBrowse link
G Flrt3 fibronectin leucine rich transmembrane protein 3 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5688833|PMID:22405201)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22405201 GO_REF:0000024 GO_REF:0000107 MGI:5688833 NCBI chr 3:134,684,446...134,696,586
Ensembl chr 3:134,683,065...134,696,654
JBrowse link
G Gja10 gap junction protein, alpha 10 acts_upstream_of_or_within ISO MGI:3043946 (MGI:3654563|PMID:16820008) RGD PMID:16820008 MGI:3654563 NCBI chr 5:47,819,484...47,841,138
Ensembl chr 5:47,835,066...47,836,586
JBrowse link
G Glra2 glycine receptor, alpha 2 IEP RGD PMID:1645300 RGD:728718 NCBI chr  X:30,612,894...30,832,078
Ensembl chr  X:30,612,903...30,831,483
JBrowse link
G Gnpat glyceronephosphate O-acyltransferase acts_upstream_of_or_within ISO MGI:2670461 (MGI:3843561|PMID:19270340) RGD PMID:19270340 MGI:3843561 NCBI chr19:57,614,813...57,640,524
Ensembl chr19:57,614,628...57,640,726
JBrowse link
G Gphn gephyrin IEP RGD PMID:9130666 RGD:1599855 NCBI chr 6:101,327,874...101,859,169
Ensembl chr 6:101,532,518...101,859,164
JBrowse link
G Gpm6a glycoprotein m6a involved_in IDA PMID:19737934 UniProt PMID:19737934 RGD:8554345 NCBI chr16:39,367,697...39,719,292
Ensembl chr16:39,367,692...39,719,187
JBrowse link
G Igfn1 immunoglobulin-like and fibronectin type III domain containing 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:52,791,188...52,823,037
Ensembl chr13:52,791,606...52,834,134
JBrowse link
G Kirrel3 kirre like nephrin family adhesion molecule 3 involved_in IBA
ISO
PMID:21873635
(MGI:5705162|PMID:26575286)
RGD PMID:26575286, PMID:21873635 MGI:5705162, RGD:13792537 NCBI chr 8:35,692,525...36,254,755
Ensembl chr 8:36,125,999...36,254,753
JBrowse link
G Map1b microtubule-associated protein 1B IEP RGD PMID:17151949 RGD:2304009 NCBI chr 2:29,675,391...29,768,750
Ensembl chr 2:29,675,391...29,768,750
JBrowse link
G Mapt microtubule-associated protein tau involved_in ISO (PMID:26704708) RGD PMID:26704708 NCBI chr10:92,289,002...92,386,517
Ensembl chr10:92,288,910...92,386,517
JBrowse link
G Mecp2 methyl CpG binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2137311|MGI:2183727 (MGI:3762433|PMID:17920015), (MGI:3794248|PMID:18295506)
Ensembl
RGD
PMID:17920015 PMID:18295506 GO_REF:0000107 MGI:3762433 MGI:3794248 NCBI chr  X:156,650,389...156,713,813
Ensembl chr  X:156,655,960...156,705,233
JBrowse link
G Myo6 myosin VI acts_upstream_of_or_within ISO MGI:1856555 (MGI:3527915|PMID:15657400) RGD PMID:15657400 MGI:3527915 NCBI chr 8:87,583,649...87,731,271
Ensembl chr 8:87,630,916...87,731,269
JBrowse link
G Nlgn1 neuroligin 1 involved_in IDA
ISO
ISS
PMID:15797875
(MGI:3694190|PMID:10892652)
GO_REF:0000024
RGD
UniProt
PMID:10892652, PMID:15797875 GO_REF:0000024 MGI:3694190, RGD:8554205 NCBI chr 2:111,057,291...111,973,681
Ensembl chr 2:111,057,291...111,793,326
JBrowse link
G Nlgn2 neuroligin 2 involved_in IDA PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chr10:56,431,586...56,444,847
Ensembl chr10:56,431,573...56,444,847
JBrowse link
G Nlgn3 neuroligin 3 involved_in IDA PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chr  X:71,199,390...71,227,460
Ensembl chr  X:71,199,491...71,222,732
JBrowse link
G Nrg1 neuregulin 1 acts_upstream_of_or_within
involved_in
ISO MGI:1928831 (MGI:1352924|PMID:10707974)
(MGI:4443139|PMID:20393464)
RGD PMID:10707974 PMID:20393464 MGI:1352924 MGI:4443139 NCBI chr16:62,969,573...64,065,063
Ensembl chr16:63,837,216...64,057,434
JBrowse link
G Nrxn1 neurexin 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1096362|MGI:1096389 (MGI:3040168|PMID:12827191)
BHF-UCL
RGD
PMID:12827191 GO_REF:0000024 MGI:3040168 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
G Nrxn2 neurexin 2 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1096389|MGI:1096391 (MGI:3040168|PMID:12827191)
BHF-UCL
RGD
PMID:12827191 GO_REF:0000024 MGI:3040168 NCBI chr 1:221,792,191...221,908,047
Ensembl chr 1:221,792,221...221,908,049
JBrowse link
G Nrxn3 neurexin 3 acts_upstream_of_or_within ISO MGI:1096362|MGI:1096391 (MGI:3040168|PMID:12827191) RGD PMID:12827191 MGI:3040168 NCBI chr 6:112,133,204...114,069,589
Ensembl chr 6:112,133,204...114,067,564
JBrowse link
G Obsl1 obscurin like cytoskeletal adaptor 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:82,673,871...82,699,577
Ensembl chr 9:82,680,384...82,699,551
JBrowse link
G Pclo piccolo (presynaptic cytomatrix protein) involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:16,454,904...17,058,921
Ensembl chr 4:16,454,904...17,058,921
JBrowse link
G Pdgfb platelet derived growth factor subunit B acts_upstream_of_or_within ISO MGI:2670574 (MGI:5607451|PMID:25224828) RGD PMID:25224828 MGI:5607451 NCBI chr 7:121,215,458...121,233,092
Ensembl chr 7:121,214,628...121,232,741
JBrowse link
G Plxnd1 plexin D1 involved_in ISO (MGI:5311980|PMID:22179111) RGD PMID:22179111 MGI:5311980 NCBI chr 4:147,854,309...147,894,170
Ensembl chr 4:147,854,309...147,893,992
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3629385|PMID:16675393) RGD PMID:16675393 MGI:3629385 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
G Rab29 RAB29, member RAS oncogene family involved_in ISO (PMID:26021297) RGD PMID:26021297 NCBI chr13:48,644,575...48,650,229
Ensembl chr13:48,644,604...48,650,220
JBrowse link
G Sdk2 sidekick cell adhesion molecule 2 involved_in IBA
ISO
PMID:21873635
(MGI:5693671|PMID:26287463)
RGD PMID:26287463, PMID:21873635 MGI:5693671, RGD:13792537 NCBI chr10:102,299,593...102,576,554
Ensembl chr10:102,303,028...102,576,878
JBrowse link
G Shank2 SH3 and multiple ankyrin repeat domains 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5432970|PMID:22699620)
BHF-UCL
RGD
PMID:22699620 GO_REF:0000024 MGI:5432970 NCBI chr 1:217,149,156...217,593,950
Ensembl chr 1:217,151,166...217,592,763
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:4948759|PMID:21423165)
BHF-UCL
RGD
PMID:21423165 GO_REF:0000024 MGI:4948759 NCBI chr 7:130,474,278...130,534,679
Ensembl chr 7:130,474,279...130,534,679
JBrowse link
G Slc25a46 solute carrier family 25, member 46 acts_upstream_of_or_within ISO MGI:6118180 (MGI:5905075|PMID:28376086) RGD PMID:28376086 MGI:5905075 NCBI chr18:24,369,104...24,397,412
Ensembl chr18:24,369,125...24,397,551
JBrowse link
G Slitrk1 SLIT and NTRK-like family, member 1 involved_in ISO (PMID:27273464) RGD PMID:27273464 NCBI chr15:93,303,382...93,307,420
Ensembl chr15:93,303,382...93,307,420
JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 acts_upstream_of_or_within ISO MGI:4417931 (MGI:5513052|PMID:23543054) RGD PMID:23543054 MGI:5513052 NCBI chr15:95,507,632...95,514,259
Ensembl chr15:95,507,640...95,514,259
JBrowse link
G Sptbn2 spectrin, beta, non-erythrocytic 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4127354 (MGI:4438955|PMID:20231455)
Ensembl
RGD
PMID:20231455 GO_REF:0000107 MGI:4438955 NCBI chr 1:219,964,429...220,006,811
Ensembl chr 1:219,964,429...220,005,068
JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (MGI:6189342|PMID:26521016) RGD PMID:26521016 MGI:6189342 NCBI chr19:27,464,937...27,500,636
Ensembl chr19:27,464,937...27,500,636
JBrowse link
synapse assembly involved in innervation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxo45 F-box protein 45 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3849742 (MGI:3849342|PMID:19398581)
RGD PMID:19398581, PMID:21873635 MGI:3849342, RGD:13792537 NCBI chr11:71,795,977...71,811,858
Ensembl chr11:71,796,282...71,808,498