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ONTOLOGY REPORT - ANNOTATIONS


Term:cell junction assembly
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Accession:GO:0034329 term browser browse the term
Definition:A cellular process that results in the aggregation, arrangement and bonding together of a set of components to form a cell junction.



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cell junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Capza1 capping actin protein of muscle Z-line subunit alpha 1 involved_in ISO
ISS
(PMID:22891260)
GO_REF:0000024
RGD
UniProt
PMID:22891260 GO_REF:0000024 NCBI chr 2:192,319,696...192,364,755
Ensembl chr 2:192,319,702...192,364,480
JBrowse link
G Cdc42 cell division cycle 42 involved_in ISO
ISS
(PMID:22891260)
GO_REF:0000024
RGD
UniProt
PMID:22891260 GO_REF:0000024 NCBI chr 5:149,555,069...149,593,239
Ensembl chr 5:149,553,724...149,593,111
JBrowse link
G Grhl2 grainyhead-like transcription factor 2 involved_in ISO (PMID:25152456) RGD PMID:25152456 NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258
JBrowse link
G Myo9a myosin IXA involved_in ISO
IEA
ISS
(PMID:22891260)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:22891260 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:60,149,234...60,352,330
Ensembl chr 8:60,149,234...60,350,514
JBrowse link
G Ophn1 oligophrenin 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:22891260)
UniProt
RGD
PMID:22891260 GO_REF:0000024 NCBI chr  X:63,599,746...63,976,678
Ensembl chr  X:63,603,042...63,976,633
JBrowse link
G Rhoa ras homolog family member A involved_in ISS
ISO
GO_REF:0000024
(PMID:22891260)
UniProt
RGD
PMID:22891260 GO_REF:0000024 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
JBrowse link
G Sh3bp1 SH3-domain binding protein 1 involved_in ISO
ISS
(PMID:22891260)
GO_REF:0000024
RGD
UniProt
PMID:22891260 GO_REF:0000024 NCBI chr 7:110,457,626...110,470,201
Ensembl chr 7:110,457,710...110,470,201
JBrowse link
G Vmp1 vacuole membrane protein 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:17724469)
UniProt
Ensembl
RGD
PMID:17724469 GO_REF:0000024 GO_REF:0000107 NCBI chr10:71,405,058...71,505,045
Ensembl chr10:71,405,452...71,505,007
JBrowse link
adherens junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta involved_in ISO
IEA
(PMID:22855531)
GO_REF:0000107
RGD
Ensembl
PMID:22855531 GO_REF:0000107 NCBI chr12:11,663,112...11,666,697
Ensembl chr12:11,663,109...11,672,877
JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISO
IEA
ISS
(PMID:20086044), (PMID:20123964)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20086044 PMID:20123964 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Fer FER tyrosine kinase IEP RGD PMID:12700184 RGD:2291909 NCBI chr 9:103,520,452...103,827,364
Ensembl chr 9:103,520,493...103,821,451
JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5494340|PMID:23565059)
Ensembl
RGD
PMID:23565059 GO_REF:0000107 MGI:5494340 NCBI chr 2:191,248,817...191,299,787
Ensembl chr 2:191,248,817...191,298,902
JBrowse link
G Jam3 junctional adhesion molecule 3 involved_in ISO
IEA
(PMID:19060272)
GO_REF:0000107
RGD
Ensembl
PMID:19060272 GO_REF:0000107 NCBI chr 8:25,508,461...25,569,306
Ensembl chr 8:25,507,057...25,569,355
JBrowse link
G Pak2 p21 (RAC1) activated kinase 2 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr11:68,707,940...68,768,816
Ensembl chr11:68,707,969...68,768,816
JBrowse link
G Ramp2 receptor activity modifying protein 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3772552|PMID:18097473)
(PMID:18097473)
UniProt
RGD
PMID:18097473 GO_REF:0000024 MGI:3772552 NCBI chr10:86,187,366...86,190,692
Ensembl chr10:86,188,812...86,231,829
JBrowse link
G Smad7 SMAD family member 7 involved_in ISO
IEA
(PMID:18593713)
GO_REF:0000107
RGD
Ensembl
PMID:18593713 GO_REF:0000107 NCBI chr18:68,988,429...69,016,774
Ensembl chr18:68,988,429...69,016,765
JBrowse link
G Tbcd tubulin folding cofactor D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:106,717,340...106,874,126
Ensembl chr10:106,717,367...106,874,122
JBrowse link
G Vcl vinculin involved_in IEA
ISO
GO_REF:0000107
(PMID:20086044)
Ensembl
RGD
PMID:20086044 GO_REF:0000107 NCBI chr15:3,265,776...3,355,586
Ensembl chr15:3,265,815...3,355,606
JBrowse link
G Zfp703 zinc finger protein 703 involved_in ISO (MGI:4940410|PMID:21317240) RGD PMID:21317240 MGI:4940410 NCBI chr16:65,076,507...65,080,677
Ensembl chr16:65,076,507...65,080,677
JBrowse link
apical junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cldn19 claudin 19 acts_upstream_of_or_within ISO MGI:3583804 (MGI:3583407|PMID:15883201) RGD PMID:15883201 MGI:3583407 NCBI chr 5:132,862,939...132,870,364
Ensembl chr 5:132,863,267...132,868,227
JBrowse link
G Ctnna1 catenin alpha 1 acts_upstream_of_or_within ISO MGI:2176173|MGI:2677796 (MGI:3619284|PMID:16543460), (MGI:5315030|PMID:22411810) RGD PMID:16543460 PMID:22411810 MGI:3619284 MGI:5315030 NCBI chr18:26,728,246...26,860,911
Ensembl chr18:26,728,485...26,860,910
JBrowse link
G Fbf1 Fas binding factor 1 involved_in ISO (PMID:18838552) RGD PMID:18838552 NCBI chr10:101,375,769...101,401,624
Ensembl chr10:101,375,775...101,401,644
JBrowse link
G Pkn2 protein kinase N2 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:4941685|PMID:20974804)
GO_REF:0000107
(PMID:20974804)
UniProt
RGD
Ensembl
PMID:20974804 GO_REF:0000024 GO_REF:0000107 MGI:4941685 NCBI chr 2:231,793,584...231,898,953
Ensembl chr 2:231,793,584...231,898,953
JBrowse link
G Rhoa ras homolog family member A involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:4941685|PMID:20974804)
(PMID:20974804)
UniProt
Ensembl
RGD
PMID:20974804 GO_REF:0000024 GO_REF:0000107 MGI:4941685 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
JBrowse link
G Rhoc ras homolog family member C involved_in ISO (PMID:20974804)
(MGI:4941685|PMID:20974804)
RGD PMID:20974804 MGI:4941685 NCBI chr 2:192,287,065...192,293,292
Ensembl chr 2:192,287,130...192,295,306
JBrowse link
G Vcl vinculin involved_in ISO
IEA
(PMID:9700171)
GO_REF:0000107
RGD
Ensembl
PMID:9700171 GO_REF:0000107 NCBI chr15:3,265,776...3,355,586
Ensembl chr15:3,265,815...3,355,606
JBrowse link
G Wdr1 WD repeat domain 1 involved_in ISO (PMID:25792565) RGD PMID:25792565 NCBI chr14:72,258,032...72,291,768
Ensembl chr14:72,257,956...72,291,766
JBrowse link
bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn4 actinin alpha 4 involved_in ISO (MGI:3794927|PMID:18332111) RGD PMID:18332111 MGI:3794927 NCBI chr 1:84,182,783...84,251,867
Ensembl chr 1:84,182,788...84,251,847
JBrowse link
G Afdn afadin, adherens junction formation factor involved_in ISO (PMID:27815408) RGD PMID:27815408 NCBI chr 1:53,905,344...54,034,216
Ensembl chr 1:53,905,373...54,034,216
JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type NOT|involved_in ISO (MGI:3789553|PMID:17403930) RGD PMID:17403930 MGI:3789553 NCBI chr10:53,863,060...53,874,938
Ensembl chr10:53,863,060...53,874,938
JBrowse link
G Aloxe3 arachidonate lipoxygenase 3 NOT|involved_in ISO (MGI:5488571|PMID:22832496) RGD PMID:22832496 MGI:5488571 NCBI chr10:53,830,219...53,854,328
Ensembl chr10:53,831,264...53,854,328
JBrowse link
G Arl2 ADP-ribosylation factor like GTPase 2 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:203,434,129...203,446,156
Ensembl chr 1:203,434,129...203,446,119
JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within ISO MGI:2389020 (MGI:3574751|PMID:15775979) RGD PMID:15775979 MGI:3574751 NCBI chr19:34,492,371...34,561,775
Ensembl chr19:34,492,371...34,561,775
JBrowse link
G Cdh5 cadherin 5 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr19:815,415...854,478
Ensembl chr19:815,411...854,368
JBrowse link
G Cgn cingulin acts_upstream_of_or_within ISO (MGI:5562592|PMID:24385485) RGD PMID:24385485 MGI:5562592 NCBI chr 2:182,308,389...182,335,747
Ensembl chr 2:182,308,714...182,334,645
JBrowse link
G Cldn1 claudin 1 involved_in ISO
IBA
(PMID:25849148), (PMID:26607202)
GO_REF:0000033
RGD
GO_Central
PMID:25849148 PMID:26607202 GO_REF:0000033 NCBI chr11:74,421,569...74,436,728
Ensembl chr11:74,421,569...74,436,724
JBrowse link
G Cldn10 claudin 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:95,862,785...95,954,526
Ensembl chr15:95,862,760...95,954,526
JBrowse link
G Cldn11 claudin 11 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 2:112,207,745...112,221,050
Ensembl chr 2:112,207,745...112,221,050
JBrowse link
G Cldn14 claudin 14 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:33,232,281...33,329,440
Ensembl chr11:33,232,220...33,329,171
JBrowse link
G Cldn15 claudin 15 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:19,698,167...19,708,419
Ensembl chr12:19,698,337...19,706,819
JBrowse link
G Cldn16 claudin 16 involved_in IBA
IEA
GO_REF:0000033
GO_REF:0000118
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr11:74,290,298...74,309,588
Ensembl chr11:74,290,298...74,309,588
JBrowse link
G Cldn17 claudin 17 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:27,827,454...27,828,630
Ensembl chr11:27,827,454...27,828,630
JBrowse link
G Cldn18 claudin 18 involved_in IBA
IEA
GO_REF:0000033
GO_REF:0000118
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 8:100,246,499...100,265,797
Ensembl chr 8:100,247,633...100,273,351
JBrowse link
G Cldn19 claudin 19 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:132,862,939...132,870,364
Ensembl chr 5:132,863,267...132,868,227
JBrowse link
G Cldn2 claudin 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:103,459,870...103,473,794
Ensembl chr  X:103,459,780...103,474,838
JBrowse link
G Cldn20 claudin 20 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:44,133,769...44,134,428
Ensembl chr 1:44,133,769...44,134,428
JBrowse link
G Cldn22 claudin 22 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:44,422,344...44,423,370
Ensembl chr16:44,422,345...44,423,354
JBrowse link
G Cldn23 claudin 23 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:56,413,677...56,415,401
Ensembl chr16:56,413,381...56,415,523
JBrowse link
G Cldn24 claudin 24 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:44,424,810...44,425,472
Ensembl chr16:44,424,810...44,425,472
JBrowse link
G Cldn25 claudin 25 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:49,391,930...49,392,664
Ensembl chr 8:49,391,975...49,392,664
JBrowse link
G Cldn3 claudin 3 involved_in ISO
IBA
(PMID:25849148)
GO_REF:0000033
RGD
GO_Central
PMID:25849148 GO_REF:0000033 NCBI chr12:21,708,538...21,710,010
Ensembl chr12:21,708,398...21,711,001
JBrowse link
G Cldn34a claudin 34A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:21,717,101...21,737,363
Ensembl chr  X:21,736,419...21,737,054
JBrowse link
G Cldn34b claudin 34B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:40,517,494...40,523,518
Ensembl chr  X:40,517,517...40,523,506
JBrowse link
G Cldn34b3 claudin 34B3 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr  X:40,276,745...40,281,540
Ensembl chr  X:40,276,760...40,281,524
JBrowse link
G Cldn34b4 claudin 34B4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:40,450,349...40,483,399
Ensembl chr  X:40,450,366...40,483,426
JBrowse link
G Cldn34c4 claudin 34C4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:90,129,724...90,135,400
Ensembl chr  X:90,129,744...90,135,369
JBrowse link
G Cldn34d claudin 34D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:40,594,666...40,603,146
Ensembl chr  X:40,594,666...40,603,146
JBrowse link
G Cldn34e claudin 34E involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:41,742,084...41,748,930
Ensembl chr  X:41,742,297...41,742,935
JBrowse link
G Cldn4 claudin 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:21,751,638...21,753,436
Ensembl chr12:21,751,331...21,753,436
JBrowse link
G Cldn5 claudin 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:82,212,822...82,214,248
Ensembl chr11:82,211,475...82,214,992
JBrowse link
G Cldn6 claudin 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:12,710,302...12,713,987
Ensembl chr10:12,709,960...12,715,973
JBrowse link
G Cldn7 claudin 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:54,689,684...54,692,177
Ensembl chr10:54,689,987...54,692,171
JBrowse link
G Cldn8 claudin 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:27,875,857...27,878,106
Ensembl chr11:27,875,692...27,878,513
JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISO (PMID:8636221) RGD PMID:8636221 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in ISO
IEA
(PMID:17332497)
GO_REF:0000107
RGD
Ensembl
PMID:17332497 GO_REF:0000107 NCBI chr11:68,911,883...69,103,230
Ensembl chr11:68,911,883...69,102,689
JBrowse link
G Ect2 epithelial cell transforming 2 involved_in ISO (PMID:15254234) RGD PMID:15254234 NCBI chr 2:109,975,813...110,037,911
Ensembl chr 2:109,975,813...110,037,911
JBrowse link
G Esam endothelial cell adhesion molecule involved_in ISO (PMID:26607202) RGD PMID:26607202 NCBI chr 8:37,238,228...37,249,217
Ensembl chr 8:37,238,287...37,249,215
JBrowse link
G Frmpd2 FERM and PDZ domain containing 2 involved_in ISO (PMID:19706687) RGD PMID:19706687 NCBI chr16:8,757,642...8,877,307
Ensembl chr16:8,757,705...8,877,303
JBrowse link
G Grhl2 grainyhead-like transcription factor 2 involved_in ISO (PMID:25152456) RGD PMID:25152456 NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258
JBrowse link
G Itgb1 integrin subunit beta 1 IMP RGD PMID:18579774 RGD:2325293 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
JBrowse link
G Marveld2 MARVEL domain containing 2 involved_in ISO
IBA
(PMID:20164257), (PMID:23073616)
GO_REF:0000033
RGD
GO_Central
PMID:20164257 PMID:23073616 GO_REF:0000033 NCBI chr 2:31,742,652...31,764,150
Ensembl chr 2:31,657,220...31,764,150
JBrowse link
G Marveld3 MARVEL domain containing 3 involved_in ISO (PMID:20164257) RGD PMID:20164257 NCBI chr19:37,908,727...37,923,420
Ensembl chr19:37,905,638...37,923,420
JBrowse link
G Micall2 MICAL-like 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5508599|PMID:18094055)
UniProt
Ensembl
RGD
PMID:18094055 GO_REF:0000024 GO_REF:0000107 MGI:5508599 NCBI chr12:14,899,188...14,927,949
Ensembl chr12:14,899,157...14,927,946
JBrowse link
G Mpp7 MAGUK p55 scaffold protein 7 involved_in ISO
IEA
(PMID:17332497)
GO_REF:0000107
RGD
Ensembl
PMID:17332497 GO_REF:0000107 NCBI chr17:55,439,939...55,706,810
Ensembl chr17:55,442,696...55,706,748
JBrowse link
G Mtdh metadherin IEP RGD PMID:15383321 RGD:1359738 NCBI chr 7:65,306,464...65,365,647
Ensembl chr 7:65,306,400...65,364,413
JBrowse link
G Ocel1 occludin/ELL domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:18,042,037...18,045,080
Ensembl chr16:18,043,309...18,045,078
JBrowse link
G Ocln occludin involved_in ISO
IBA
(PMID:20164257), (PMID:26607202)
GO_REF:0000033
RGD
GO_Central
PMID:20164257 PMID:26607202 GO_REF:0000033 NCBI chr 2:31,657,217...31,707,466
Ensembl chr 2:31,657,220...31,764,150
JBrowse link
G Pak2 p21 (RAC1) activated kinase 2 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr11:68,707,940...68,768,816
Ensembl chr11:68,707,969...68,768,816
JBrowse link
G Pard3 par-3 family cell polarity regulator involved_in IMP PMID:18082612 UniProt PMID:18082612 RGD:8553352 NCBI chr19:55,080,282...55,630,111
Ensembl chr19:55,080,282...55,629,778
JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5819325|PMID:27336173)
UniProt
Ensembl
RGD
PMID:27336173 GO_REF:0000024 GO_REF:0000107 MGI:5819325 NCBI chr 8:113,590,998...113,646,795
Ensembl chr 8:113,590,998...113,646,773
JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 involved_in ISO
IEA
(PMID:26607202)
GO_REF:0000107
RGD
Ensembl
PMID:26607202 GO_REF:0000107 NCBI chr10:91,590,521...91,652,279
Ensembl chr10:91,590,521...91,652,116
JBrowse link
G Pof1b POF1B, actin binding protein involved_in ISO
IBA
(PMID:21940798)
GO_REF:0000033
RGD
GO_Central
PMID:21940798 GO_REF:0000033 NCBI chr  X:77,683,128...77,749,827
Ensembl chr  X:77,683,128...77,749,688
JBrowse link
G Rab13 RAB13, member RAS oncogene family involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:12058051), (PMID:15096524)
UniProt
Ensembl
RGD
PMID:12058051 PMID:15096524 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:175,674,894...175,680,043
Ensembl chr 2:175,675,005...175,680,036
JBrowse link
G Ramp2 receptor activity modifying protein 2 involved_in ISO
ISS
(PMID:18097473)
(MGI:3772552|PMID:18097473)
GO_REF:0000024
RGD
UniProt
PMID:18097473 GO_REF:0000024 MGI:3772552 NCBI chr10:86,187,366...86,190,692
Ensembl chr10:86,188,812...86,231,829
JBrowse link
G Samt1 spermatogenesis associated multipass transmembrane protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:22,866,302...22,922,946
Ensembl chr  X:22,866,303...22,931,169
JBrowse link
G Samt2 spermatogenesis associated multipass transmembrane protein 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:23,355,211...23,407,134
Ensembl chr  X:23,342,423...23,358,120
JBrowse link
G Samt2l1 spermatogenesis associated multipass transmembrane protein 2 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:22,434,268...22,437,212
Ensembl chr  X:22,434,315...22,437,190
JBrowse link
G Samt2l2 spermatogenesis associated multipass transmembrane protein 2 like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:22,376,690...22,379,601
Ensembl chr  X:22,376,726...22,379,593
JBrowse link
G Samt2l3 spermatogenesis associated multipass transmembrane protein 2 like 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:21,798,460...21,803,412
Ensembl chr  X:21,798,482...21,802,166
JBrowse link
G Samt3 spermatogenesis associated multipass transmembrane protein 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:50,571,864...50,574,698
Ensembl chr  X:50,571,864...50,574,716
JBrowse link
G Samt4 spermatogenesis associated multipass transmembrane protein 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:22,676,830...22,679,573
Ensembl chr  X:22,676,825...22,679,569
JBrowse link
G Slc39a9 solute carrier family 39, member 9 involved_in IMP
IDA
PMID:27164415
PMID:35625396
UniProt PMID:27164415 PMID:35625396 RGD:155663545, RGD:155663535 NCBI chr 6:100,291,537...100,330,419
Ensembl chr 6:100,291,573...100,330,408
JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:2445832|MGI:3522206 (MGI:4421610|PMID:20047077) RGD PMID:20047077 MGI:4421610 NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
JBrowse link
G Tbcd tubulin folding cofactor D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:106,717,340...106,874,126
Ensembl chr10:106,717,367...106,874,122
JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:8636221) RGD PMID:8636221 NCBI chr 1:118,849,838...119,094,492
Ensembl chr 1:118,849,838...119,094,432
JBrowse link
G Wnt11 Wnt family member 11 acts_upstream_of_or_within ISO MGI:2665014 (MGI:3759355|PMID:17767158) RGD PMID:17767158 MGI:3759355 NCBI chr 1:153,134,503...153,154,294
Ensembl chr 1:153,138,197...153,154,294
JBrowse link
cell-cell junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arvcf ARVCF, delta catenin family member involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr11:82,588,137...82,645,832
Ensembl chr11:82,587,881...82,645,805
JBrowse link
G Cdh1 cadherin 1 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr19:34,492,371...34,561,775
Ensembl chr19:34,492,371...34,561,775
JBrowse link
G Cdh10 cadherin 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:68,628,623...68,850,995
Ensembl chr 2:68,628,780...68,850,995
JBrowse link
G Cdh11 cadherin 11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:2,148,447...2,305,754
Ensembl chr19:2,148,458...2,304,272
JBrowse link
G Cdh12 cadherin 12 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:70,474,679...71,705,369
Ensembl chr 2:70,475,043...71,700,572
JBrowse link
G Cdh13 cadherin 13 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:46,349,562...47,387,462
Ensembl chr19:46,349,430...47,387,459
JBrowse link
G Cdh15 cadherin 15 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:50,903,757...50,927,151
Ensembl chr19:50,903,638...50,927,105
JBrowse link
G Cdh16 cadherin 16 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr19:360,824...371,008
Ensembl chr19:360,824...371,007
JBrowse link
G Cdh17 cadherin 17 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 5:25,262,820...25,314,884
Ensembl chr 5:25,262,758...25,314,884
JBrowse link
G Cdh18 cadherin 18 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:72,818,076...73,820,144
Ensembl chr 2:73,345,005...73,820,138
JBrowse link
G Cdh19 cadherin 19 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:27,935,915...28,047,490
Ensembl chr13:27,936,668...28,019,310
JBrowse link
G Cdh2 cadherin 2 involved_in IEA
IBA
ISO
ISS
GO_REF:0000107
GO_REF:0000033
GO_REF:0000118
(MGI:6216737|PMID:26750727)
GO_REF:0000024
Ensembl
GO_Central
TreeGrafter
RGD
UniProt
PMID:26750727 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:6216737 NCBI chr18:7,776,704...7,990,934
Ensembl chr18:7,776,704...7,990,167
JBrowse link
G Cdh20 cadherin 20 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr13:20,737,640...21,069,746
Ensembl chr13:20,738,081...21,068,676
JBrowse link
G Cdh22 cadherin 22 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:153,845,563...153,970,630
Ensembl chr 3:153,845,787...153,970,588
JBrowse link
G Cdh24 cadherin 24 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:28,091,578...28,101,330
Ensembl chr15:28,091,637...28,101,340
JBrowse link
G Cdh26 cadherin 26 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 3:165,520,523...165,573,191
Ensembl chr 3:165,520,439...165,572,149
JBrowse link
G Cdh3 cadherin 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:34,393,596...34,444,084
Ensembl chr19:34,393,727...34,444,084
JBrowse link
G Cdh4 cadherin 4 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 3:166,525,092...167,003,380
Ensembl chr 3:166,525,099...167,003,371
JBrowse link
G Cdh5 cadherin 5 involved_in ISO
IBA
(PMID:23288152)
GO_REF:0000033
RGD
GO_Central
PMID:23288152 GO_REF:0000033 NCBI chr19:815,415...854,478
Ensembl chr19:815,411...854,368
JBrowse link
G Cdh6 cadherin 6 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 2:62,079,139...62,225,298
Ensembl chr 2:62,079,137...62,225,228
JBrowse link
G Cdh7 cadherin 7 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr13:26,672,058...26,821,571
Ensembl chr13:26,672,484...26,819,846
JBrowse link
G Cdh8 cadherin 8 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr19:5,494,038...5,901,810
Ensembl chr19:5,494,174...5,895,669
JBrowse link
G Cdh9 cadherin 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:66,280,422...66,367,121
Ensembl chr 2:66,228,117...66,367,121
JBrowse link
G Cdhr1 cadherin-related family member 1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr16:12,843,436...12,863,321
Ensembl chr16:12,843,437...12,863,396
JBrowse link
G Cdhr18 cadherin related family member 18 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr15:11,300,005...11,379,464
Ensembl chr15:11,300,005...11,390,120
JBrowse link
G Cdhr2 cadherin-related family member 2 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr17:9,876,853...9,913,356
Ensembl chr17:9,876,860...9,912,575
JBrowse link
G Cdhr3 cadherin-related family member 3 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 6:49,641,833...49,702,016
Ensembl chr 6:49,641,813...49,702,017
JBrowse link
G Cldn5 claudin 5 involved_in ISO (PMID:23288152) RGD PMID:23288152 NCBI chr11:82,212,822...82,214,248
Ensembl chr11:82,211,475...82,214,992
JBrowse link
G Ctnnd1 catenin delta 1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 3:69,683,328...69,734,550
Ensembl chr 3:69,683,313...69,734,516
JBrowse link
G Ctnnd2 catenin delta 2 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 2:81,168,525...82,016,495
Ensembl chr 2:81,167,117...82,015,764
JBrowse link
G Dsc1 desmocollin 1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr18:11,499,936...11,556,801
Ensembl chr18:11,502,003...11,528,494
JBrowse link
G Dsc2 desmocollin 2 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr18:11,450,392...11,482,476
Ensembl chr18:11,450,390...11,482,392
JBrowse link
G Dsc3 desmocollin 3 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr18:11,379,759...11,413,797
Ensembl chr18:11,377,347...11,413,797
JBrowse link
G Fat1 FAT atypical cadherin 1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr16:47,177,253...47,296,261
Ensembl chr16:47,177,248...47,296,107
JBrowse link
G Fat3 FAT atypical cadherin 3 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 8:12,691,470...13,274,336
Ensembl chr 8:12,694,019...13,273,135
JBrowse link
G Flcn folliculin involved_in ISS
ISO
GO_REF:0000024
(MGI:5487492|PMID:22965878)
UniProt
RGD
PMID:22965878 GO_REF:0000024 MGI:5487492 NCBI chr10:44,588,621...44,607,808
Ensembl chr10:44,588,624...44,607,769
JBrowse link
G Fscn1 fascin actin-bundling protein 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:9571235)
UniProt
Ensembl
RGD
PMID:9571235 GO_REF:0000024 GO_REF:0000107 NCBI chr12:11,597,042...11,610,183
Ensembl chr12:11,597,048...11,610,211
JBrowse link
G Hdac7 histone deacetylase 7 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:3693627 (MGI:3692697|PMID:16873063)
GO_REF:0000107
RGD
Ensembl
PMID:16873063 GO_REF:0000107 MGI:3692697 NCBI chr 7:128,923,918...128,961,926
Ensembl chr 7:128,923,920...128,962,072
JBrowse link
G Lin7b lin-7 homolog B, crumbs cell polarity complex component NAS RGD PMID:10362251 RGD:633233 NCBI chr 1:95,846,888...95,849,628
Ensembl chr 1:95,846,243...95,849,977
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in ISO
IEA
(MGI:3620334|PMID:16473946)
GO_REF:0000107
RGD
Ensembl
PMID:16473946 GO_REF:0000107 MGI:3620334 NCBI chr 7:23,846,122...23,942,085
Ensembl chr 7:23,846,122...23,942,047
JBrowse link
G Pcdh15 protocadherin related 15 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:13,997,094...15,496,446
Ensembl chr20:13,963,565...15,494,719
JBrowse link
G Pkp1 plakophilin 1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr13:47,309,607...47,357,432
Ensembl chr13:47,309,614...47,357,465
JBrowse link
G Pkp4 plakophilin 4 involved_in ISO (MGI:5487492|PMID:22965878) RGD PMID:22965878 MGI:5487492 NCBI chr 3:43,632,364...43,835,834
Ensembl chr 3:43,631,880...43,835,474
JBrowse link
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:4820667|PMID:20413591)
UniProt
RGD
PMID:20413591 GO_REF:0000024 MGI:4820667 NCBI chr12:41,938,533...41,977,517
Ensembl chr12:41,938,560...41,977,517
JBrowse link
cell-substrate junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fn1 fibronectin 1 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
GO_REF:0000107
GO_REF:0000033
GO_REF:0000118
(MGI:2667760|PMID:12867986)
Ensembl
GO_Central
TreeGrafter
RGD
PMID:12867986 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:2667760 NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678
JBrowse link
G Itga5 integrin subunit alpha 5 acts_upstream_of_or_within ISO (MGI:2667760|PMID:12867986) RGD PMID:12867986 MGI:2667760 NCBI chr 7:134,478,963...134,502,837
Ensembl chr 7:134,478,968...134,502,837
JBrowse link
G Itgb3 integrin subunit beta 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2667760|PMID:12867986)
GO_REF:0000107
RGD
Ensembl
PMID:12867986 GO_REF:0000107 MGI:2667760 NCBI chr10:89,509,917...89,564,679
Ensembl chr10:89,509,989...89,564,679
JBrowse link
G Tln1 talin 1 acts_upstream_of_or_within ISO (MGI:2667760|PMID:12867986) RGD PMID:12867986 MGI:2667760 NCBI chr 5:57,787,670...57,817,900
Ensembl chr 5:57,787,943...57,817,900
JBrowse link
G Tns1 tensin 1 acts_upstream_of_or_within ISO MGI:2447792 (MGI:86584|PMID:9087448) RGD PMID:9087448 MGI:86584 NCBI chr 9:75,491,886...75,702,853
Ensembl chr 9:75,495,814...75,703,225
JBrowse link
desmosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jup junction plakoglobin involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:20859650), (PMID:9049256)
GO_REF:0000107
MGI:1857539 (MGI:1314706|PMID:9847250), (MGI:3843580|PMID:18496566), (MGI:85439|PMID:8954745)
RGD
Ensembl
PMID:8954745 PMID:9049256 PMID:9847250 PMID:18496566 PMID:20859650 GO_REF:0000107 MGI:1314706 MGI:3843580 MGI:85439 NCBI chr10:85,300,438...85,327,378
Ensembl chr10:85,300,440...85,327,057
JBrowse link
G Pkp2 plakophilin 2 involved_in ISO (PMID:18474624) RGD PMID:18474624 NCBI chr11:84,661,783...84,727,730
Ensembl chr11:84,661,783...84,727,730
JBrowse link
G Pkp3 plakophilin 3 involved_in ISO (PMID:20859650) RGD PMID:20859650 NCBI chr 1:196,187,914...196,198,843
Ensembl chr 1:196,187,835...196,198,844
JBrowse link
G Prkca protein kinase C, alpha involved_in ISO
IEA
(PMID:18474624)
GO_REF:0000107
RGD
Ensembl
PMID:18474624 GO_REF:0000107 NCBI chr10:92,889,390...93,288,013
Ensembl chr10:92,894,012...93,288,012
JBrowse link
excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn3 calsyntenin 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5516394|PMID:24094106)
UniProt
RGD
PMID:24094106 GO_REF:0000024 MGI:5516394 NCBI chr 4:157,331,494...157,364,769
Ensembl chr 4:157,331,494...157,364,769
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO MGI:2677631 (MGI:5449476|PMID:23074245), (MGI:6381243|PMID:31141683) RGD PMID:23074245 PMID:31141683 MGI:5449476 MGI:6381243 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in ISO (PMID:27418511) RGD PMID:27418511 NCBI chr 4:92,415,019...93,892,472
Ensembl chr 4:92,415,230...93,889,355
JBrowse link
G Lrrc4 leucine rich repeat containing 4 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:3664681|PMID:16980967)
GO_REF:0000033
RGD
GO_Central
PMID:16980967 GO_REF:0000033 MGI:3664681 NCBI chr 4:57,433,518...57,437,114
Ensembl chr 4:57,433,428...57,437,911
JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO
IEA
(MGI:5780536|PMID:22960622), (MGI:5908777|PMID:26440732)
GO_REF:0000107
RGD
Ensembl
PMID:22960622 PMID:26440732 GO_REF:0000107 MGI:5780536 MGI:5908777 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Nptn neuroplastin acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:5621191 (MGI:5581388|PMID:24554721)
GO_REF:0000107
RGD
Ensembl
PMID:24554721 GO_REF:0000107 MGI:5581388 NCBI chr 8:58,996,873...59,063,402
Ensembl chr 8:58,996,887...59,063,401
JBrowse link
G Plxnb2 plexin B2 involved_in ISO (MGI:6269924|PMID:29981480) RGD PMID:29981480 MGI:6269924 NCBI chr 7:120,232,276...120,258,385
Ensembl chr 7:120,232,331...120,258,330
JBrowse link
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 involved_in ISO (PMID:27373832)
(MGI:5829526|PMID:27373832)
RGD PMID:27373832 MGI:5829526 NCBI chr13:42,745,956...42,967,091
Ensembl chr13:42,745,947...42,967,058
JBrowse link
filtration diaphragm assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fkrp fukutin related protein acts_upstream_of_or_within ISO MGI:4834518 (MGI:6100603|PMID:27711214) RGD PMID:27711214 MGI:6100603 NCBI chr 1:77,479,641...77,486,954
Ensembl chr 1:77,476,084...77,486,992
JBrowse link
focal adhesion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn1 actinin, alpha 1 involved_in ISO
IEA
(PMID:16807302)
GO_REF:0000107
RGD
Ensembl
PMID:16807302 GO_REF:0000107 NCBI chr 6:98,998,553...99,093,334
Ensembl chr 6:98,998,556...99,093,251
JBrowse link
G Actn2 actinin alpha 2 involved_in ISO (PMID:16807302) RGD PMID:16807302 NCBI chr17:58,143,334...58,210,622
Ensembl chr17:58,142,625...58,210,622
JBrowse link
G Actn3 actinin alpha 3 involved_in ISO (PMID:16807302) RGD PMID:16807302 NCBI chr 1:202,159,081...202,175,012
Ensembl chr 1:202,159,082...202,175,012
JBrowse link
G Ajuba ajuba LIM protein acts_upstream_of_or_within ISO MGI:3578221 (MGI:3577694|PMID:15728191) RGD PMID:15728191 MGI:3577694 NCBI chr15:28,019,775...28,031,537
Ensembl chr15:28,019,778...28,030,021
JBrowse link
G Arhgap6 Rho GTPase activating protein 6 acts_upstream_of_or_within ISO (MGI:2447568|PMID:10699171) RGD PMID:10699171 MGI:2447568 NCBI chr  X:24,953,464...25,490,003
Ensembl chr  X:24,953,464...25,488,663
JBrowse link
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1857134 (MGI:3526739|PMID:15292044)
GO_REF:0000107
RGD
Ensembl
PMID:15292044 GO_REF:0000107 MGI:3526739 NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743
JBrowse link
G Bcr BCR activator of RhoGEF and GTPase involved_in ISO (PMID:23940119) RGD PMID:23940119 NCBI chr20:13,469,325...13,596,942
Ensembl chr20:13,471,668...13,597,016
JBrowse link
G Cdh11 cadherin 11 involved_in ISO (PMID:33811546) RGD PMID:33811546 NCBI chr19:2,148,447...2,305,754
Ensembl chr19:2,148,458...2,304,272
JBrowse link
G Coro2b coronin 2B acts_upstream_of_or_within ISO MGI:4419137 (MGI:6110508|PMID:29162887) RGD PMID:29162887 MGI:6110508 NCBI chr 8:62,906,861...63,017,295
Ensembl chr 8:62,906,867...63,017,302
JBrowse link
G Cttn cortactin involved_in IMP PMID:18768925 UniProt PMID:18768925 RGD:10047281 NCBI chr 1:199,599,710...199,635,254
Ensembl chr 1:199,599,710...199,635,164
JBrowse link
G Dlc1 DLC1 Rho GTPase activating protein acts_upstream_of_or_within ISO MGI:3529997 (MGI:3529660|PMID:15710412) RGD PMID:15710412 MGI:3529660 NCBI chr16:55,246,716...55,671,441
Ensembl chr16:55,291,584...55,671,439
JBrowse link
G Fermt2 FERM domain containing kindlin 2 involved_in ISO (PMID:21356350)
(MGI:3789779|PMID:18483218)
RGD PMID:18483218 PMID:21356350 MGI:3789779 NCBI chr15:18,682,927...18,751,959
Ensembl chr15:18,682,927...18,751,811
JBrowse link
G Itga2 integrin subunit alpha 2 IMP RGD PMID:15591055 RGD:8693310 NCBI chr 2:46,520,345...46,621,487
Ensembl chr 2:46,523,948...46,621,481
JBrowse link
G Pdpk1 3-phosphoinositide dependent protein kinase-1 IMP RGD PMID:14585963 RGD:1581775 NCBI chr10:13,105,435...13,182,664
Ensembl chr10:13,105,498...13,174,623
JBrowse link
G Peak1 pseudopodium-enriched atypical kinase 1 involved_in ISO (PMID:23105102) RGD PMID:23105102 NCBI chr 8:56,605,040...56,819,748
Ensembl chr 8:56,609,015...56,819,096
JBrowse link
G Pip5k1a phosphatidylinositol-4-phosphate 5-kinase, type 1, alpha involved_in ISO
IEA
(PMID:20660631)
GO_REF:0000107
RGD
Ensembl
PMID:20660631 GO_REF:0000107 NCBI chr 2:182,628,299...182,671,584
Ensembl chr 2:182,628,300...182,671,598
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta IMP RGD PMID:14585963 RGD:1581775 NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282
JBrowse link
G Ptprk protein tyrosine phosphatase, receptor type, K involved_in ISO (PMID:15899872) RGD PMID:15899872 NCBI chr 1:16,738,896...17,236,687
Ensembl chr 1:16,850,576...17,103,605
JBrowse link
G Pxn paxillin acts_upstream_of_or_within ISO (MGI:2680875|PMID:14636584) RGD PMID:14636584 MGI:2680875 NCBI chr12:41,060,791...41,107,952
Ensembl chr12:41,060,791...41,107,931
JBrowse link
G Rcc2 regulator of chromosome condensation 2 involved_in ISO (PMID:19738201) RGD PMID:19738201 NCBI chr 5:152,994,406...153,017,223
Ensembl chr 5:152,993,665...153,017,205
JBrowse link
G Rhod ras homolog family member D involved_in ISO (PMID:23087206) RGD PMID:23087206 NCBI chr 1:201,708,699...201,724,405
Ensembl chr 1:201,708,699...201,722,632
JBrowse link
G Rhpn1 rhophilin, Rho GTPase binding protein 1 acts_upstream_of_or_within ISO MGI:6316664 (MGI:6316493|PMID:25071083) RGD PMID:25071083 MGI:6316493 NCBI chr 7:107,391,948...107,402,713
Ensembl chr 7:107,391,984...107,402,713
JBrowse link
G Sorbs1 sorbin and SH3 domain containing 1 involved_in ISO
ISS
(MGI:1196128|PMID:9461600)
GO_REF:0000024
RGD
UniProt
PMID:9461600 GO_REF:0000024 MGI:1196128 NCBI chr 1:239,107,882...239,330,276
Ensembl chr 1:239,108,777...239,330,169
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase involved_in ISO (PMID:21411625) RGD PMID:21411625 NCBI chr 3:146,091,969...146,139,492
Ensembl chr 3:146,091,841...146,139,476
JBrowse link
G Ston1 stonin 1 acts_upstream_of_or_within ISO MGI:5788726 (MGI:5699914|PMID:26437238) RGD PMID:26437238 MGI:5699914 NCBI chr 6:5,843,186...5,892,557
Ensembl chr 6:5,843,185...5,892,449
JBrowse link
G Taok2 TAO kinase 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:10660600)
Ensembl
RGD
PMID:10660600 GO_REF:0000107 NCBI chr 1:181,475,708...181,494,738
Ensembl chr 1:181,475,711...181,494,613
JBrowse link
G Tesk2 testis associated actin remodelling kinase 2 involved_in IMP PMID:11418599 UniProt PMID:11418599 RGD:727318 NCBI chr 5:130,178,715...130,270,594
Ensembl chr 5:130,185,033...130,271,292
JBrowse link
G Thsd1 thrombospondin type 1 domain containing 1 involved_in ISO (PMID:29069646) RGD PMID:29069646 NCBI chr16:69,771,408...69,804,844
Ensembl chr16:69,771,408...69,801,504
JBrowse link
G Thy1 Thy-1 cell surface antigen involved_in IDA PMID:15093746 UniProt PMID:15093746 RGD:8553684 NCBI chr 8:44,389,495...44,394,688
Ensembl chr 8:44,389,513...44,394,659
JBrowse link
G Whamm WASP homolog associated with actin, golgi membranes and microtubules involved_in ISO (PMID:23087206) RGD PMID:23087206 NCBI chr 1:135,526,363...135,557,091
Ensembl chr 1:135,526,386...135,554,759
JBrowse link
gap junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnna1 catenin alpha 1 IMP RGD PMID:12577316 RGD:2289808 NCBI chr18:26,728,246...26,860,911
Ensembl chr18:26,728,485...26,860,910
JBrowse link
G Gja1 gap junction protein, alpha 1 involved_in TAS PMID:15709751 UniProt PMID:15709751 RGD:8554661 NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582
JBrowse link
G Gja5 gap junction protein, alpha 5 involved_in ISO (PMID:16790700), (PMID:22247482), (PMID:23348765) RGD PMID:16790700 PMID:22247482 PMID:23348765 NCBI chr 2:184,602,407...184,621,952
Ensembl chr 2:184,564,475...184,621,952
JBrowse link
G Gjb2 gap junction protein, beta 2 involved_in
acts_upstream_of_or_within
ISO (PMID:12767933)
(MGI:5568196|PMID:24590285)
RGD PMID:12767933 PMID:24590285 MGI:5568196 NCBI chr15:31,260,390...31,278,222
Ensembl chr15:31,260,357...31,278,177
JBrowse link
G Gjb6 gap junction protein, beta 6 involved_in ISO (PMID:19285977) RGD PMID:19285977 NCBI chr15:31,284,561...31,294,552
Ensembl chr15:31,284,419...31,294,582
JBrowse link
G Gjc1 gap junction protein, gamma 1 involved_in ISO (MGI:5544102|PMID:22982984) RGD PMID:22982984 MGI:5544102 NCBI chr10:87,758,192...87,785,443
Ensembl chr10:87,760,528...87,785,867
JBrowse link
G Gjd3 gap junction protein, delta 3 involved_in ISO (PMID:12154091) RGD PMID:12154091 NCBI chr10:83,933,694...83,935,759
Ensembl chr10:83,934,135...83,934,971
JBrowse link
G Pkp2 plakophilin 2 IMP RGD PMID:17673670 RGD:6784510 NCBI chr11:84,661,783...84,727,730
Ensembl chr11:84,661,783...84,727,730
JBrowse link
gephyrin clustering involved in postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn2 neuroligin 2 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
MGI:2679447 (MGI:6114383|PMID:29107521)
(MGI:5284797|PMID:15620359)
BHF-UCL
Ensembl
RGD
PMID:15620359 PMID:29107521 GO_REF:0000024 GO_REF:0000107 MGI:5284797 MGI:6114383 NCBI chr10:54,544,461...54,557,854
Ensembl chr10:54,544,588...54,558,434
JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5284797|PMID:15620359), (MGI:5285129|PMID:21424692)
BHF-UCL
Ensembl
RGD
PMID:15620359 PMID:21424692 GO_REF:0000024 GO_REF:0000107 MGI:5284797 MGI:5285129 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
JBrowse link
G Nrxn2 neurexin 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5285129|PMID:21424692)
BHF-UCL
Ensembl
RGD
PMID:21424692 GO_REF:0000024 GO_REF:0000107 MGI:5285129 NCBI chr 1:203,726,420...203,842,301
Ensembl chr 1:203,735,753...203,842,297
JBrowse link
G Slitrk3 SLIT and NTRK-like family, member 3 acts_upstream_of_or_within ISO MGI:2681835|MGI:6119690 (MGI:6114383|PMID:29107521) RGD PMID:29107521 MGI:6114383 NCBI chr 2:157,680,067...157,697,404
Ensembl chr 2:157,687,535...157,696,709
JBrowse link
G Zdhhc12 zinc finger DHHC-type palmitoyltransferase 12 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5586946|PMID:25025157)
UniProt
Ensembl
RGD
PMID:25025157 GO_REF:0000024 GO_REF:0000107 MGI:5586946 NCBI chr 3:13,363,504...13,366,383
Ensembl chr 3:13,363,504...13,366,474
JBrowse link
hemidesmosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col17a1 collagen type XVII alpha 1 chain involved_in ISO (PMID:12482924) RGD PMID:12482924 NCBI chr 1:246,530,589...246,577,559
Ensembl chr 1:246,531,367...246,577,632
JBrowse link
G Dst dystonin involved_in ISO
IBA
(PMID:12482924)
GO_REF:0000033
RGD
GO_Central
PMID:12482924 GO_REF:0000033 NCBI chr 9:36,135,657...36,529,617
Ensembl chr 9:36,135,284...36,529,615
JBrowse link
G Itgb4 integrin subunit beta 4 involved_in IEA
ISO
GO_REF:0000002
(PMID:12482924), (PMID:23496044)
GO_REF:0000107
InterPro
RGD
Ensembl
PMID:12482924 PMID:23496044 GO_REF:0000002 GO_REF:0000107 NCBI chr10:101,206,657...101,243,012
Ensembl chr10:101,206,665...101,243,012
JBrowse link
G Lama3 laminin subunit alpha 3 IMP RGD PMID:8923212 RGD:633107 NCBI chr18:3,523,168...3,751,722
Ensembl chr18:3,523,133...3,751,353
JBrowse link
G Lamc1 laminin subunit gamma 1 involved_in ISO (PMID:15159456) RGD PMID:15159456 NCBI chr13:65,374,372...65,501,492
Ensembl chr13:65,374,372...65,501,492
JBrowse link
G Plec plectin involved_in ISS
IEA
IBA
ISO
GO_REF:0000024
GO_REF:0000118
GO_REF:0000033
GO_REF:0000107
(PMID:12482924)
UniProt
TreeGrafter
GO_Central
Ensembl
RGD
PMID:12482924 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:107,887,764...107,949,100
Ensembl chr 7:107,887,764...107,945,467
JBrowse link
inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbln4 cerebellin 4 precursor involved_in ISO (MGI:6280523|PMID:30679375), (MGI:6383349|PMID:25534236) RGD PMID:25534236 PMID:30679375 MGI:6280523 MGI:6383349 NCBI chr 3:160,799,587...160,807,143
Ensembl chr 3:160,799,587...160,807,143
JBrowse link
G Clstn2 calsyntenin 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:6093273|PMID:26171716)
Ensembl
RGD
PMID:26171716 GO_REF:0000107 MGI:6093273 NCBI chr 8:98,020,406...98,637,232
Ensembl chr 8:98,021,666...98,637,731
JBrowse link
G Clstn3 calsyntenin 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5516394|PMID:24094106)
UniProt
RGD
PMID:24094106 GO_REF:0000024 MGI:5516394 NCBI chr 4:157,331,494...157,364,769
Ensembl chr 4:157,331,494...157,364,769
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO MGI:2677631 (MGI:5449476|PMID:23074245), (MGI:6381243|PMID:31141683) RGD PMID:23074245 PMID:31141683 MGI:5449476 MGI:6381243 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027
JBrowse link
G Fgf13 fibroblast growth factor 13 involved_in ISS
ISO
GO_REF:0000024
(MGI:6280523|PMID:30679375)
UniProt
RGD
PMID:30679375 GO_REF:0000024 MGI:6280523 NCBI chr  X:137,276,498...137,800,056
Ensembl chr  X:137,276,511...137,800,391
JBrowse link
G Gabra1 gamma-aminobutyric acid type A receptor subunit alpha 1 involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(MGI:6208009|PMID:27129275)
(PMID:23909897), (PMID:25489750)
UniProt
GO_Central
Ensembl
RGD
PMID:23909897 PMID:25489750 PMID:27129275 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:6208009 NCBI chr10:26,595,151...26,650,611
Ensembl chr10:26,595,160...26,650,864
JBrowse link
G Gabra2 gamma-aminobutyric acid type A receptor subunit alpha 2 involved_in IEA
IBA
ISO
ISS
GO_REF:0000107
GO_REF:0000033
(MGI:6208009|PMID:27129275)
GO_REF:0000024
Ensembl
GO_Central
RGD
UniProt
PMID:27129275 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:6208009 NCBI chr14:37,097,251...37,230,030
Ensembl chr14:37,097,279...37,228,944
JBrowse link
G Gabra3 gamma-aminobutyric acid type A receptor subunit alpha 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:150,244,745...150,501,566
Ensembl chr  X:150,261,607...150,501,559
JBrowse link
G Gabra4 gamma-aminobutyric acid type A receptor subunit alpha 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:36,590,782...36,667,724
Ensembl chr14:36,590,782...36,665,844
JBrowse link
G Gabra5 gamma-aminobutyric acid type A receptor subunit alpha 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:108,268,728...108,381,670
Ensembl chr 1:108,268,776...108,380,917
JBrowse link
G Gabra6 gamma-aminobutyric acid type A receptor subunit alpha6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:26,810,411...26,825,768
Ensembl chr10:26,810,423...26,825,769
JBrowse link
G Gabrb2 gamma-aminobutyric acid type A receptor subunit beta 2 involved_in ISO
IEA
ISS
(PMID:23909897), (PMID:25489750)
GO_REF:0000107
(MGI:6208009|PMID:27129275)
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:23909897 PMID:25489750 PMID:27129275 GO_REF:0000024 GO_REF:0000107 MGI:6208009 NCBI chr10:26,936,592...27,156,141
Ensembl chr10:26,936,551...27,151,251
JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta 3 involved_in ISO
IEA
ISS
(PMID:25489750)
GO_REF:0000107
(MGI:6208009|PMID:27129275)
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:25489750 PMID:27129275 GO_REF:0000024 GO_REF:0000107 MGI:6208009 NCBI chr 1:108,467,047...108,702,522
Ensembl chr 1:108,296,124...108,698,961
JBrowse link
G Gabre gamma-aminobutyric acid type A receptor subunit epsilon involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:150,060,035...150,078,773
Ensembl chr  X:150,060,040...150,078,693
JBrowse link
G Gabrg1 gamma-aminobutyric acid type A receptor subunit gamma 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:37,396,217...37,469,606
Ensembl chr14:37,396,294...37,635,956
JBrowse link
G Gabrg2 gamma-aminobutyric acid type A receptor subunit gamma 2 involved_in IEA
IBA
ISO
ISS
GO_REF:0000107
GO_REF:0000033
(MGI:6208009|PMID:27129275)
GO_REF:0000024
(PMID:23909897), (PMID:25489750)
Ensembl
GO_Central
RGD
UniProt
PMID:23909897 PMID:25489750 PMID:27129275 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:6208009 NCBI chr10:26,374,693...26,463,937
Ensembl chr10:26,374,694...26,464,346
JBrowse link
G Gabrg3 gamma-aminobutyric acid type A receptor subunit gamma 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:107,627,450...108,247,483
Ensembl chr 1:107,627,390...108,246,763
JBrowse link
G Hapln4 hyaluronan and proteoglycan link protein 4 involved_in ISO (MGI:6272145|PMID:30125937) RGD PMID:30125937 MGI:6272145 NCBI chr16:19,333,106...19,341,243
Ensembl chr16:19,333,106...19,341,243
JBrowse link
G Lgi2 leucine-rich repeat LGI family, member 2 involved_in ISO
IBA
(MGI:6280523|PMID:30679375)
GO_REF:0000033
RGD
GO_Central
PMID:30679375 GO_REF:0000033 MGI:6280523 NCBI chr14:58,415,965...58,443,450
Ensembl chr14:58,415,965...58,443,407
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 acts_upstream_of_or_within ISO (MGI:5476874|PMID:23358245) RGD PMID:23358245 MGI:5476874 NCBI chr20:7,900,327...7,964,309
Ensembl chr20:7,904,358...7,963,471
JBrowse link
G Nlgn2 neuroligin 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:5780536|PMID:22960622)
Ensembl
RGD
PMID:22960622 GO_REF:0000107 MGI:5780536 NCBI chr10:54,544,461...54,557,854
Ensembl chr10:54,544,588...54,558,434
JBrowse link
G Npas4 neuronal PAS domain protein 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:3826741|PMID:18815592)
UniProt
RGD
PMID:18815592 GO_REF:0000024 MGI:3826741 NCBI chr 1:202,281,260...202,298,681
Ensembl chr 1:202,281,958...202,286,724
JBrowse link
G Plxnb1 plexin B1 involved_in ISO (MGI:5498626|PMID:23699507), (MGI:6269924|PMID:29981480) RGD PMID:23699507 PMID:29981480 MGI:5498626 MGI:6269924 NCBI chr 8:109,743,470...109,769,153
Ensembl chr 8:109,744,697...109,769,027
JBrowse link
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 involved_in ISO (PMID:27373832)
(MGI:5829526|PMID:27373832)
RGD PMID:27373832 MGI:5829526 NCBI chr13:42,745,956...42,967,091
Ensembl chr13:42,745,947...42,967,058
JBrowse link
negative regulation of bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta involved_in ISO
IEA
(PMID:25816133)
GO_REF:0000107
RGD
Ensembl
PMID:25816133 GO_REF:0000107 NCBI chr16:69,319,487...69,373,251
Ensembl chr16:69,319,554...69,373,250
JBrowse link
G Mir105 microRNA 105 acts_upstream_of ISO (PMID:24735924) RGD PMID:24735924 NCBI chr  X:150,438,529...150,438,601
Ensembl chr  X:150,438,529...150,438,601
JBrowse link
G Mir142 microRNA 142 involved_in ISO (PMID:27277258) RGD PMID:27277258 NCBI chr10:72,557,864...72,557,950
Ensembl chr10:72,557,857...72,557,967
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:O75116 (PMID:25816133)
Ensembl
RGD
PMID:25816133 GO_REF:0000107 NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:Q13464 (PMID:25816133)
Ensembl
RGD
PMID:25816133 GO_REF:0000107 NCBI chr 6:39,679,116...39,774,033
Ensembl chr 6:39,679,082...39,774,031
JBrowse link
G Rps6 ribosomal protein S6 IDA RGD PMID:25217631 RGD:11041641 NCBI chr 5:101,371,716...101,374,576
Ensembl chr 5:101,371,136...101,374,602
Ensembl chr 5:101,371,136...101,374,602
JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:25816133) RGD PMID:25816133 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
JBrowse link
negative regulation of excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn3 calsyntenin 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:7275955|PMID:35420982)
UniProt
RGD
PMID:35420982 GO_REF:0000024 MGI:7275955 NCBI chr 4:157,331,494...157,364,769
Ensembl chr 4:157,331,494...157,364,769
JBrowse link
G Ptpn13 protein tyrosine phosphatase, non-receptor type 13 IDA RGD PMID:23769722 RGD:152975632 NCBI chr14:6,108,202...6,282,619
Ensembl chr14:6,108,211...6,282,563
JBrowse link
negative regulation of focal adhesion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvrl1 activin A receptor like type 1 involved_in ISO (PMID:12453878) RGD PMID:12453878 NCBI chr 7:132,239,200...132,256,592
Ensembl chr 7:132,239,729...132,256,591
JBrowse link
G Apod apolipoprotein D involved_in ISS
ISO
GO_REF:0000024
(PMID:21705670)
UniProt
RGD
PMID:21705670 GO_REF:0000024 NCBI chr11:69,431,261...69,452,306
Ensembl chr11:69,431,260...69,452,305
JBrowse link
G Arhgap6 Rho GTPase activating protein 6 involved_in ISO (PMID:10699171) RGD PMID:10699171 NCBI chr  X:24,953,464...25,490,003
Ensembl chr  X:24,953,464...25,488,663
JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr 8:113,677,345...113,859,957
Ensembl chr 8:113,677,284...113,858,731
JBrowse link
G Coro1c coronin 1C involved_in ISO (PMID:19913511) RGD PMID:19913511 NCBI chr12:42,713,024...42,785,179
Ensembl chr12:42,712,991...42,785,179
JBrowse link
G Dlc1 DLC1 Rho GTPase activating protein involved_in ISO
IEA
(PMID:19158340)
GO_REF:0000107
RGD
Ensembl
PMID:19158340 GO_REF:0000107 NCBI chr16:55,246,716...55,671,441
Ensembl chr16:55,291,584...55,671,439
JBrowse link
G Dmtn dematin actin binding protein involved_in ISO (MGI:3803395|PMID:18505823) RGD PMID:18505823 MGI:3803395 NCBI chr15:45,677,974...45,702,261
Ensembl chr15:45,677,977...45,705,601
JBrowse link
G Dusp22 dual specificity phosphatase 22 involved_in ISO (PMID:20018849) RGD PMID:20018849 NCBI chr17:33,780,980...33,831,241
Ensembl chr17:33,780,981...33,831,321
JBrowse link
G Fam107a family with sequence similarity 107, member A involved_in ISO
IEA
ISS
(PMID:20543869)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20543869 GO_REF:0000024 GO_REF:0000107 NCBI chr15:16,608,362...16,630,398
Ensembl chr15:16,607,205...16,630,396
JBrowse link
G Itgb1bp1 integrin subunit beta 1 binding protein 1 involved_in ISO
IBA
(PMID:12473654)
GO_REF:0000033
(MGI:5486544|PMID:18227284)
RGD
GO_Central
PMID:12473654 PMID:18227284 GO_REF:0000033 MGI:5486544 NCBI chr 6:40,820,693...40,836,074
Ensembl chr 6:40,821,339...40,836,037
JBrowse link
G Lrp1 LDL receptor related protein 1 IMP RGD PMID:20197276 RGD:13800550 NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
JBrowse link
G Mmp14 matrix metallopeptidase 14 IDA RGD PMID:15044209 RGD:1582604 NCBI chr15:27,887,795...27,897,020
Ensembl chr15:27,887,727...27,899,864
JBrowse link
G Phldb2 pleckstrin homology-like domain, family B, member 2 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr11:54,859,173...55,078,212
Ensembl chr11:54,859,135...55,078,467
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:9616126) RGD PMID:9616126 NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838
JBrowse link
G Rcc2 regulator of chromosome condensation 2 involved_in ISO (MGI:5551375|PMID:19738201) RGD PMID:19738201 MGI:5551375 NCBI chr 5:152,994,406...153,017,223
Ensembl chr 5:152,993,665...153,017,205
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase involved_in IMP PMID:21440892 BHF-UCL PMID:21440892 RGD:7248703 NCBI chr 3:146,091,969...146,139,492
Ensembl chr 3:146,091,841...146,139,476
JBrowse link
negative regulation of gap junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace angiotensin I converting enzyme involved_in IEA
ISO
GO_REF:0000107
(MGI:5607357|PMID:25017399)
Ensembl
RGD
PMID:25017399 GO_REF:0000107 MGI:5607357 NCBI chr10:90,910,316...90,930,437
Ensembl chr10:90,910,316...90,931,131
JBrowse link
G Il1b interleukin 1 beta involved_in ISO (PMID:11090614) RGD PMID:11090614 NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
JBrowse link
G Mir23a microRNA 23a IMP RGD PMID:25798059 RGD:13592600 NCBI chr19:23,954,997...23,955,071
Ensembl chr19:23,954,997...23,955,071
JBrowse link
negative regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbln1 cerebellin 1 precursor involved_in ISS
ISO
GO_REF:0000024
(MGI:5707148|PMID:24467251)
UniProt
RGD
PMID:24467251 GO_REF:0000024 MGI:5707148 NCBI chr19:19,608,763...19,612,572
Ensembl chr19:19,608,716...19,612,572
JBrowse link
negative regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in ISO (MGI:6274944|PMID:29643768) RGD PMID:29643768 MGI:6274944 NCBI chr 1:228,381,521...228,385,202
Ensembl chr 1:228,381,521...228,385,202
JBrowse link
negative regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epha7 Eph receptor A7 involved_in ISO
IEA
(MGI:5426777|PMID:19036963)
GO_REF:0000107
RGD
Ensembl
PMID:19036963 GO_REF:0000107 MGI:5426777 NCBI chr 5:42,975,353...43,128,703
Ensembl chr 5:42,975,405...43,127,112
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 IDA RGD PMID:23358245 RGD:9743980 NCBI chr20:7,900,327...7,964,309
Ensembl chr20:7,904,358...7,963,471
JBrowse link
G Ptk2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO MGI:1857596 (MGI:3056242|PMID:15378065) RGD PMID:15378065 MGI:3056242 NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
JBrowse link
G Rhoa ras homolog family member A IMP RGD PMID:27893610 RGD:243048440 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
JBrowse link
G Robo1 roundabout guidance receptor 1 IMP RGD PMID:27893610 RGD:243048440 NCBI chr11:10,580,863...11,621,675
Ensembl chr11:10,580,908...11,620,203
JBrowse link
G Slit1 slit guidance ligand 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
JBrowse link
G Tlr2 toll-like receptor 2 involved_in ISO UniProtKB:P05067|UniProtKB:P49768 (MGI:5307186|PMID:22198949) RGD PMID:22198949 MGI:5307186 NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630
JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO
IEA
(MGI:4820709|PMID:18986540)
GO_REF:0000107
RGD
Ensembl
PMID:18986540 GO_REF:0000107 MGI:4820709 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
JBrowse link
negative regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsk3b glycogen synthase kinase 3 beta involved_in IMP PMID:25764078 CACAO PMID:25764078 RGD:15023478 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
neurexin clustering involved in presynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:2665153|PMID:12796785)
BHF-UCL
Ensembl
RGD
PMID:12796785 GO_REF:0000024 GO_REF:0000107 MGI:2665153 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
neuroligin clustering involved in postsynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh2 cadherin 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:4457945|PMID:20534458)
Ensembl
RGD
PMID:20534458 GO_REF:0000107 MGI:4457945 NCBI chr18:7,776,704...7,990,934
Ensembl chr18:7,776,704...7,990,167
JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO (MGI:4457945|PMID:20534458) RGD PMID:20534458 MGI:4457945 NCBI chr 4:14,386,389...15,870,036
Ensembl chr 4:14,386,399...15,870,240
JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5284797|PMID:15620359), (MGI:5285129|PMID:21424692)
BHF-UCL
Ensembl
RGD
PMID:15620359 PMID:21424692 GO_REF:0000024 GO_REF:0000107 MGI:5284797 MGI:5285129 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
JBrowse link
G Nrxn2 neurexin 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5285129|PMID:21424692)
BHF-UCL
Ensembl
RGD
PMID:21424692 GO_REF:0000024 GO_REF:0000107 MGI:5285129 NCBI chr 1:203,726,420...203,842,301
Ensembl chr 1:203,735,753...203,842,297
JBrowse link
paranodal junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 IEP RGD PMID:16687515 RGD:1599119 NCBI chr 2:215,378,028...215,954,015
Ensembl chr 2:215,379,680...215,862,923
JBrowse link
G Cd9 CD9 molecule involved_in ISS
ISO
GO_REF:0000024
(MGI:3027661|PMID:14715942)
UniProt
RGD
PMID:14715942 GO_REF:0000024 MGI:3027661 NCBI chr 4:158,256,328...158,289,136
Ensembl chr 4:158,256,328...158,289,222
JBrowse link
G Cntnap1 contactin associated protein 1 involved_in ISS
ISO
TAS
GO_REF:0000024
MGI:3026869 (MGI:3621602|PMID:16551741), (MGI:3624505|PMID:16687515), (MGI:4838147|PMID:19816196)
(PMID:27818385)
PMID:19166515
BHF-UCL
RGD
PMID:16551741 PMID:16687515 PMID:19816196 PMID:27818385 PMID:19166515 GO_REF:0000024 MGI:3621602 MGI:3624505 MGI:4838147, RGD:6483326 NCBI chr10:86,109,850...86,125,612
Ensembl chr10:86,111,643...86,125,611
JBrowse link
G Epb41l3 erythrocyte membrane protein band 4.1-like 3 involved_in ISO (MGI:5296417|PMID:21966409) RGD PMID:21966409 MGI:5296417 NCBI chr 9:109,056,178...109,260,607
Ensembl chr 9:109,016,113...109,260,607
JBrowse link
G Gnpat glyceronephosphate O-acyltransferase acts_upstream_of_or_within ISO MGI:2670461 (MGI:3843561|PMID:19270340) RGD PMID:19270340 MGI:3843561 NCBI chr19:52,822,326...52,848,872
Ensembl chr19:52,822,319...52,852,361
JBrowse link
G Nfasc neurofascin acts_upstream_of_or_within
involved_in
ISO MGI:3808598|MGI:4837620 (MGI:3621515|PMID:16337912), (MGI:4452171|PMID:20371806)
(MGI:3836161|PMID:19185024)
RGD PMID:16337912 PMID:19185024 PMID:20371806 MGI:3621515 MGI:3836161 MGI:4452171 NCBI chr13:43,997,223...44,183,863
Ensembl chr13:43,997,224...44,183,880
JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO MGI:3614822 (MGI:3613258|PMID:16436605) RGD PMID:16436605 MGI:3613258 NCBI chr10:47,795,709...47,825,715
Ensembl chr10:47,795,709...47,825,714
JBrowse link
G Ugt8 UDP glycosyltransferase 8 involved_in ISO (MGI:3621602|PMID:16551741) RGD PMID:16551741 MGI:3621602 NCBI chr 2:214,264,483...214,332,769
Ensembl chr 2:214,264,483...214,332,660
JBrowse link
positive regulation of bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvrl1 activin A receptor like type 1 involved_in ISO UniProtKB:Q9UK05 (PMID:32561494) RGD PMID:32561494 NCBI chr 7:132,239,200...132,256,592
Ensembl chr 7:132,239,729...132,256,591
JBrowse link
G Cdc45 cell division cycle 45 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr11:82,185,427...82,210,630
Ensembl chr11:82,185,473...82,210,619
JBrowse link
G Cldn1 claudin 1 IMP RGD PMID:22684624 RGD:11341733 NCBI chr11:74,421,569...74,436,728
Ensembl chr11:74,421,569...74,436,724
JBrowse link
G Cldn3 claudin 3 involved_in ISO (PMID:20655293) RGD PMID:20655293 NCBI chr12:21,708,538...21,710,010
Ensembl chr12:21,708,398...21,711,001
JBrowse link
G Cldn5 claudin 5 involved_in ISO (PMID:25323998) RGD PMID:25323998 NCBI chr11:82,212,822...82,214,248
Ensembl chr11:82,211,475...82,214,992
JBrowse link
G Epha2 Eph receptor A2 involved_in ISO (PMID:27815408) RGD PMID:27815408 NCBI chr 5:153,605,644...153,634,115
Ensembl chr 5:153,605,644...153,634,117
JBrowse link
G Gcg glucagon involved_in ISO (PMID:25050009) RGD PMID:25050009 NCBI chr 3:47,113,914...47,122,958
Ensembl chr 3:47,113,914...47,122,929
JBrowse link
G Gdf2 growth differentiation factor 2 involved_in ISO (PMID:32561494) RGD PMID:32561494 NCBI chr16:9,255,430...9,261,429
Ensembl chr16:9,255,430...9,261,429
JBrowse link
G Il17a interleukin 17A involved_in IEA
ISO
GO_REF:0000107
(MGI:5788042|PMID:26431948)
Ensembl
RGD
PMID:26431948 GO_REF:0000107 MGI:5788042 NCBI chr 9:23,144,402...23,147,889
Ensembl chr 9:23,144,402...23,147,889
JBrowse link
G Nphp1 nephrocystin 1 involved_in ISO (PMID:19755384) RGD PMID:19755384 NCBI chr 3:114,960,650...115,016,234
Ensembl chr 3:114,960,650...115,016,234
JBrowse link
G Nphp4 nephrocystin 4 involved_in ISO (PMID:19755384) RGD PMID:19755384 NCBI chr 5:162,986,157...163,073,708
Ensembl chr 5:162,988,370...163,073,706
JBrowse link
positive regulation of cell junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cldn19 claudin 19 involved_in ISO (PMID:27593915) RGD PMID:27593915 NCBI chr 5:132,862,939...132,870,364
Ensembl chr 5:132,863,267...132,868,227
JBrowse link
G Cldn3 claudin 3 involved_in ISO (PMID:27593915) RGD PMID:27593915 NCBI chr12:21,708,538...21,710,010
Ensembl chr12:21,708,398...21,711,001
JBrowse link
G Crb3 crumbs cell polarity complex component 3 involved_in ISO (MGI:4939579|PMID:21145499) RGD PMID:21145499 MGI:4939579 NCBI chr 9:1,898,531...1,903,860
Ensembl chr 9:1,896,623...1,903,859
JBrowse link
G Flot1 flotillin 1 involved_in ISO
IEA
IBA
(PMID:24046456)
GO_REF:0000118
GO_REF:0000033
(MGI:5634880|PMID:24046456)
RGD
TreeGrafter
GO_Central
PMID:24046456 GO_REF:0000033 GO_REF:0000118 MGI:5634880 NCBI chr20:2,917,864...2,927,993
Ensembl chr20:2,917,137...2,927,978
JBrowse link
positive regulation of excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sema4a semaphorin 4A involved_in ISO (MGI:6269924|PMID:29981480) RGD PMID:29981480 MGI:6269924 NCBI chr 2:173,896,432...173,917,903
Ensembl chr 2:173,896,439...173,914,442
JBrowse link
G Vstm5 V-set and transmembrane domain containing 5 involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(MGI:5800585|PMID:27683913)
UniProt
GO_Central
RGD
PMID:27683913 GO_REF:0000024 GO_REF:0000033 MGI:5800585 NCBI chr 8:12,080,019...12,100,443
Ensembl chr 8:12,080,203...12,100,427
JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:21670302) RGD PMID:21670302 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981
JBrowse link
positive regulation of focal adhesion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in ISO (PMID:24863063) RGD PMID:24863063 NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
JBrowse link
G Cfl1 cofilin 1 IMP RGD PMID:24093776 RGD:11570550 NCBI chr 1:202,796,012...202,801,337
Ensembl chr 1:202,786,627...202,817,587
JBrowse link
G Col16a1 collagen type XVI alpha 1 chain involved_in ISO (PMID:24466237) RGD PMID:24466237 NCBI chr 5:142,388,376...142,442,825
Ensembl chr 5:142,388,426...142,442,825
JBrowse link
G Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 IDA RGD PMID:22139091 RGD:9685417 NCBI chr 7:86,202,345...86,325,050
Ensembl chr 7:86,202,350...86,324,827
JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO MGI:3822451 (MGI:3821807|PMID:18794329) RGD PMID:18794329 MGI:3821807 NCBI chr13:30,670,792...30,770,213
Ensembl chr13:30,669,764...30,768,360
JBrowse link
G Fermt2 FERM domain containing kindlin 2 involved_in ISO (PMID:29496737) RGD PMID:29496737 NCBI chr15:18,682,927...18,751,959
Ensembl chr15:18,682,927...18,751,811
JBrowse link
G Fmn1 formin 1 acts_upstream_of_or_within ISO MGI:3800994 (MGI:3798334|PMID:18560567) RGD PMID:18560567 MGI:3798334 NCBI chr 3:100,101,103...100,485,652
Ensembl chr 3:100,134,549...100,479,220
JBrowse link
G Hrg histidine-rich glycoprotein involved_in ISO
ISS
(PMID:14744774), (PMID:16436387)
GO_REF:0000024
RGD
UniProt
PMID:14744774 PMID:16436387 GO_REF:0000024 NCBI chr11:78,054,488...78,069,402
Ensembl chr11:78,054,498...78,069,389
JBrowse link
G Hrg l1 histidine-rich glycoprotein like 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr11:78,039,371...78,049,353
Ensembl chr11:78,039,376...78,049,353
JBrowse link
G Iqgap1 IQ motif containing GTPase activating protein 1 IMP RGD PMID:23657573 RGD:11049552 NCBI chr 1:134,679,581...134,769,776
Ensembl chr 1:134,679,586...134,769,755
JBrowse link
G Itgb1bp1 integrin subunit beta 1 binding protein 1 involved_in ISO (MGI:5486551|PMID:17654484) RGD PMID:17654484 MGI:5486551 NCBI chr 6:40,820,693...40,836,074
Ensembl chr 6:40,821,339...40,836,037
JBrowse link
G Kdr kinase insert domain receptor involved_in IEA
ISO
GO_REF:0000107
(PMID:12820653)
Ensembl
RGD
PMID:12820653 GO_REF:0000107 NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
JBrowse link
G Lims1 LIM zinc finger domain containing 1 involved_in ISO (PMID:20926685) RGD PMID:20926685 NCBI chr20:26,309,833...26,418,511
Ensembl chr20:26,309,895...26,418,500
JBrowse link
G Map4k4 mitogen-activated protein kinase kinase kinase kinase 4 involved_in ISO (MGI:6189265|PMID:25490267) RGD PMID:25490267 MGI:6189265 NCBI chr 9:42,200,708...42,326,708
Ensembl chr 9:42,200,278...42,326,698
JBrowse link
G Myh9 myosin, heavy chain 9 IMP RGD PMID:21598299 RGD:12798522 NCBI chr 7:109,343,718...109,424,457
Ensembl chr 7:109,343,706...109,424,457
JBrowse link
G Myoc myocilin involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:18855004)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:18855004 GO_REF:0000024 GO_REF:0000107 NCBI chr13:74,976,730...74,987,128
Ensembl chr13:74,976,730...74,987,127
JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (PMID:24863063) RGD PMID:24863063 NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
JBrowse link
G Poldip2 DNA polymerase delta interacting protein 2 IMP RGD PMID:30354218 RGD:124713558 NCBI chr10:63,407,237...63,417,605
Ensembl chr10:63,407,213...63,417,605
JBrowse link
G Ppm1f protein phosphatase, Mg2+/Mn2+ dependent, 1F involved_in ISS
ISO
GO_REF:0000024
(PMID:20016286)
UniProt
RGD
PMID:20016286 GO_REF:0000024 NCBI chr11:84,064,422...84,094,410
Ensembl chr11:84,064,420...84,094,340
JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 IMP RGD PMID:16905534 RGD:39456088 NCBI chr12:35,365,436...35,424,925
Ensembl chr12:35,383,144...35,424,925
JBrowse link
G Ptprj protein tyrosine phosphatase, receptor type, J involved_in ISO (PMID:21091576) RGD PMID:21091576 NCBI chr 3:76,405,917...76,561,842
Ensembl chr 3:76,405,927...76,562,260
JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO
IEA
(PMID:23129259)
GO_REF:0000107
RGD
Ensembl
PMID:23129259 GO_REF:0000107 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5486551|PMID:17654484)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17654484 GO_REF:0000024 GO_REF:0000107 MGI:5486551 NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571
JBrowse link
G S100a10 S100 calcium binding protein A10 involved_in ISO
IEA
(PMID:23129259)
GO_REF:0000107
RGD
Ensembl
PMID:23129259 GO_REF:0000107 NCBI chr 2:179,221,012...179,229,659
Ensembl chr 2:179,220,887...179,229,661
JBrowse link
G Sdc4 syndecan 4 IMP RGD PMID:10504291 RGD:2312327 NCBI chr 3:153,154,888...153,173,576
Ensembl chr 3:153,154,896...153,173,580
JBrowse link
G Smad3 SMAD family member 3 IDA RGD PMID:15987742 RGD:2300418 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
JBrowse link
G Tek TEK receptor tyrosine kinase involved_in ISO (PMID:18425120) RGD PMID:18425120 NCBI chr 5:109,607,077...109,733,805
Ensembl chr 5:109,607,077...109,733,804
JBrowse link
G Thy1 Thy-1 cell surface antigen involved_in ISO
IEA
IBA
ISS
(PMID:18346467)
GO_REF:0000118
GO_REF:0000033
GO_REF:0000107
(MGI:3796911|PMID:18346467)
RGD
TreeGrafter
GO_Central
Ensembl
PMID:18346467 PMID:18346467 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:3796911, RGD:12793016 NCBI chr 8:44,389,495...44,394,688
Ensembl chr 8:44,389,513...44,394,659
JBrowse link
G Tsc1 TSC complex subunit 1 involved_in ISO
IEA
(PMID:10806479)
GO_REF:0000107
RGD
Ensembl
PMID:10806479 GO_REF:0000107 NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO
IEA
ISS
(PMID:16489009)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:16489009 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
JBrowse link
G Wnt4 Wnt family member 4 involved_in ISO UniProtKB:P01112 (MGI:5487484|PMID:23027131) RGD PMID:23027131 MGI:5487484 NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
JBrowse link
positive regulation of gap junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin converting enzyme 2 involved_in ISO
IEA
(PMID:12967627)
GO_REF:0000107
RGD
Ensembl
PMID:12967627 GO_REF:0000107 NCBI chr  X:30,293,597...30,340,961
Ensembl chr  X:30,293,589...30,340,977
JBrowse link
G Agt angiotensinogen involved_in ISO
IEA
UniProtKB:P00797 (PMID:17416596)
GO_REF:0000107
RGD
Ensembl
PMID:17416596 GO_REF:0000107 NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
JBrowse link
G Cav1 caveolin 1 involved_in ISO
IEA
(MGI:5607357|PMID:25017399)
GO_REF:0000107
RGD
Ensembl
PMID:25017399 GO_REF:0000107 MGI:5607357 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:33238150) RGD PMID:33238150 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027
JBrowse link
G Hopx HOP homeobox involved_in ISO (MGI:3624209|PMID:15790958) RGD PMID:15790958 MGI:3624209 NCBI chr14:31,055,912...31,082,909
Ensembl chr14:31,075,148...31,082,909
JBrowse link
G Irx3 iroquois homeobox 3 involved_in ISO (MGI:5288100|PMID:21825130), (MGI:6101691|PMID:26786475) RGD PMID:21825130 PMID:26786475 MGI:5288100 MGI:6101691 NCBI chr19:15,211,882...15,215,317
Ensembl chr19:15,211,878...15,215,317
JBrowse link
G Tbx5 T-box transcription factor 5 involved_in IEA
ISO
GO_REF:0000107
(MGI:5449667|PMID:22728936)
Ensembl
RGD
PMID:22728936 GO_REF:0000107 MGI:5449667 NCBI chr12:36,686,344...36,739,253
Ensembl chr12:36,688,014...36,734,885
JBrowse link
positive regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn3 calsyntenin 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:7275955|PMID:35420982)
UniProt
RGD
PMID:35420982 GO_REF:0000024 MGI:7275955 NCBI chr 4:157,331,494...157,364,769
Ensembl chr 4:157,331,494...157,364,769
JBrowse link
G Sema4a semaphorin 4A involved_in ISO (MGI:6269924|PMID:29981480) RGD PMID:29981480 MGI:6269924 NCBI chr 2:173,896,432...173,917,903
Ensembl chr 2:173,896,439...173,914,442
JBrowse link
G Sema4d semaphorin 4D involved_in ISO (MGI:5498626|PMID:23699507), (MGI:6269924|PMID:29981480) RGD PMID:23699507 PMID:29981480 MGI:5498626 MGI:6269924 NCBI chr17:13,430,324...13,537,146
Ensembl chr17:13,430,379...13,537,138
JBrowse link
positive regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efnb3 ephrin B3 IMP RGD PMID:17626212 RGD:152995392 NCBI chr10:54,274,506...54,281,951
Ensembl chr10:54,274,506...54,280,471
JBrowse link
positive regulation of presynaptic active zone assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in IDA PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Nrxn1 neurexin 1 involved_in TAS PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
JBrowse link
positive regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr3 actin related protein 3 IMP RGD PMID:18430734 RGD:2306201 NCBI chr13:36,800,739...36,843,837
Ensembl chr13:36,800,093...36,844,124
JBrowse link
G Adgrb1 adhesion G protein-coupled receptor B1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5576449|PMID:24613359)
GO_REF:0000107
RGD
Ensembl
PMID:24613359 GO_REF:0000107 MGI:5576449 NCBI chr 7:106,404,827...106,476,902
Ensembl chr 7:106,404,958...106,476,902
JBrowse link
G Adgrb2 adhesion G protein-coupled receptor B2 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 5:142,299,190...142,362,540
Ensembl chr 5:142,331,329...142,362,540
JBrowse link
G Adgrb3 adhesion G protein-coupled receptor B3 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 9:27,421,168...28,148,979
Ensembl chr 9:27,421,168...28,148,855
JBrowse link
G Adgre5 adhesion G protein-coupled receptor E5 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr19:24,397,972...24,418,648
Ensembl chr19:24,398,689...24,418,638
JBrowse link
G Adgrl1 adhesion G protein-coupled receptor L1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr19:24,202,405...24,244,137
Ensembl chr19:24,204,360...24,244,139
JBrowse link
G Adgrl2 adhesion G protein-coupled receptor L2 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 2:237,696,055...238,327,141
Ensembl chr 2:237,696,056...238,327,141
JBrowse link
G Adgrl3 adhesion G protein-coupled receptor L3 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr14:26,336,320...27,104,060
Ensembl chr14:26,368,277...27,105,860
JBrowse link
G Adnp activity-dependent neuroprotector homeobox IDA RGD PMID:15800376 RGD:2312779 NCBI chr 3:156,886,921...156,921,500
Ensembl chr 3:156,891,381...156,917,312
JBrowse link
G Amigo1 adhesion molecule with Ig like domain 1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 2:195,823,138...195,828,593
Ensembl chr 2:195,823,042...195,829,585
JBrowse link
G Amigo2 adhesion molecule with Ig like domain 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5576449|PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 MGI:5576449 NCBI chr 7:128,391,493...128,394,589
Ensembl chr 7:128,390,412...128,394,695
JBrowse link
G Amigo3 adhesion molecule with Ig like domain 3 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 8:108,741,899...108,743,425
Ensembl chr 8:108,693,060...108,744,555
JBrowse link
G Asic2 acid sensing ion channel subunit 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180111 (MGI:3851850|PMID:19571134)
Ensembl
RGD
PMID:19571134 GO_REF:0000107 MGI:3851850 NCBI chr10:65,870,592...66,940,577
Ensembl chr10:65,870,594...66,940,424
JBrowse link
G Bdnf brain-derived neurotrophic factor involved_in ISO
IEA
(PMID:19036963)
GO_REF:0000107
RGD
Ensembl
PMID:19036963 GO_REF:0000107 NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
JBrowse link
G Cbln1 cerebellin 1 precursor acts_upstream_of_or_within ISO MGI:1096391 (MGI:5002432|PMID:21356198) RGD PMID:21356198 MGI:5002432 NCBI chr19:19,608,763...19,612,572
Ensembl chr19:19,608,716...19,612,572
JBrowse link
G Cbln2 cerebellin 2 precursor acts_upstream_of_or_within ISO (MGI:5002432|PMID:21356198) RGD PMID:21356198 MGI:5002432 NCBI chr18:79,940,412...79,948,766
Ensembl chr18:79,942,590...79,947,855
JBrowse link
G Clstn1 calsyntenin 1 acts_upstream_of_or_within
involved_in
ISO
IBA
IEA
MGI:1929897|MGI:2178323 (MGI:5576449|PMID:24613359)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107
RGD
GO_Central
TreeGrafter
Ensembl
PMID:24613359 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:5576449 NCBI chr 5:160,031,235...160,094,585
Ensembl chr 5:160,031,308...160,094,583
JBrowse link
G Clstn2 calsyntenin 2 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
GO_REF:0000107
GO_REF:0000033
GO_REF:0000118
MGI:1929895|MGI:2178323 (MGI:5576449|PMID:24613359)
Ensembl
GO_Central
TreeGrafter
RGD
PMID:24613359 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:5576449 NCBI chr 8:98,020,406...98,637,232
Ensembl chr 8:98,021,666...98,637,731
JBrowse link
G Clstn3 calsyntenin 3 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
GO_REF:0000107
GO_REF:0000118
GO_REF:0000033
MGI:1929895|MGI:1929897 (MGI:5576449|PMID:24613359)
Ensembl
TreeGrafter
GO_Central
RGD
PMID:24613359 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:5576449 NCBI chr 4:157,331,494...157,364,769
Ensembl chr 4:157,331,494...157,364,769
JBrowse link
G Cux2 cut-like homeobox 2 involved_in ISO (MGI:4836115|PMID:20510857) RGD PMID:20510857 MGI:4836115 NCBI chr12:34,507,723...34,707,581
Ensembl chr12:34,520,959...34,705,806
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 IMP RGD PMID:26738857 RGD:243048441 NCBI chr10:54,740,700...54,769,097
Ensembl chr10:54,739,470...54,767,153
JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 involved_in ISO (MGI:5608921|PMID:25232112) RGD PMID:25232112 MGI:5608921 NCBI chr15:75,786...209,735
Ensembl chr15:75,786...187,837
JBrowse link
G Eef2k eukaryotic elongation factor-2 kinase IMP RGD PMID:20427644 RGD:10401235 NCBI chr 1:175,393,119...175,456,756
Ensembl chr 1:175,393,154...175,455,164
JBrowse link
G Efna5 ephrin A5 involved_in ISO (MGI:5426777|PMID:19036963) RGD PMID:19036963 MGI:5426777 NCBI chr 9:102,316,753...102,595,480
Ensembl chr 9:102,320,295...102,597,413
JBrowse link
G Ephb1 Eph receptor B1 involved_in ISS
ISO
GO_REF:0000024
(MGI:2683349|PMID:14691139)
UniProt
RGD
PMID:14691139 GO_REF:0000024 MGI:2683349 NCBI chr 8:102,507,549...102,944,839
Ensembl chr 8:102,507,549...102,944,839
JBrowse link
G Ephb2 Eph receptor B2 involved_in ISO
IMP
(MGI:2683349|PMID:14691139), (MGI:4881358|PMID:21029865) RGD PMID:14691139 PMID:21029865 PMID:21364901 MGI:2683349 MGI:4881358, RGD:127285794 NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
JBrowse link
G Ephb3 Eph receptor B3 involved_in ISO (MGI:2683349|PMID:14691139) RGD PMID:14691139 MGI:2683349 NCBI chr11:79,840,668...79,859,345
Ensembl chr11:79,840,668...79,859,370
JBrowse link
G Flrt1 fibronectin leucine rich transmembrane protein 1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 1:204,275,785...204,292,844
Ensembl chr 1:204,275,367...204,353,750
JBrowse link
G Flrt2 fibronectin leucine rich transmembrane protein 2 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 6:114,777,547...114,872,688
Ensembl chr 6:114,777,599...114,872,785
JBrowse link
G Flrt3 fibronectin leucine rich transmembrane protein 3 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 3:127,994,491...128,008,137
Ensembl chr 3:127,994,226...128,007,841
JBrowse link
G Ghrl ghrelin and obestatin prepropeptide acts_upstream_of_or_within ISO MGI:3045041 (MGI:3620293|PMID:16491079)
(PMID:16491079)
RGD PMID:16491079 MGI:3620293 NCBI chr 4:146,865,712...146,869,621
Ensembl chr 4:146,865,712...146,869,621
JBrowse link
G Gprasp3 G protein-coupled receptor associated sorting protein family member 3 involved_in ISO (MGI:5545985|PMID:21199326) RGD PMID:21199326 MGI:5545985 NCBI chr  X:98,847,591...98,854,949
Ensembl chr  X:98,817,593...98,854,545
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in ISO (PMID:27418511) RGD PMID:27418511 NCBI chr 4:92,415,019...93,892,472
Ensembl chr 4:92,415,230...93,889,355
JBrowse link
G Il1rap interleukin 1 receptor accessory protein involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5645611|PMID:25908590)
UniProt
Ensembl
RGD
PMID:25908590 GO_REF:0000024 GO_REF:0000107 MGI:5645611 NCBI chr11:74,062,999...74,199,530
Ensembl chr11:74,070,304...74,199,530
JBrowse link
G Il1rapl1 interleukin 1 receptor accessory protein-like 1 involved_in ISO
ISS
(MGI:5645611|PMID:25908590)
GO_REF:0000024
RGD
UniProt
PMID:25908590 GO_REF:0000024 MGI:5645611 NCBI chr  X:51,371,969...52,876,726
Ensembl chr  X:51,378,215...52,876,772
JBrowse link
G Iqsec1 IQ motif and Sec7 domain ArfGEF 1 IMP RGD PMID:26884337 RGD:11560558 NCBI chr 4:123,168,719...123,488,300
Ensembl chr 4:123,168,719...123,488,172
JBrowse link
G Iqsec2 IQ motif and Sec7 domain ArfGEF 2 IMP RGD PMID:26884337 RGD:11560558 NCBI chr  X:21,254,799...21,337,179
Ensembl chr  X:21,254,914...21,336,584
JBrowse link
G Lingo2 leucine rich repeat and Ig domain containing 2 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 5:50,370,744...51,687,252
Ensembl chr 5:50,367,101...50,516,956
JBrowse link
G Lingo4 leucine rich repeat and Ig domain containing 4 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 2:182,035,522...182,040,787
Ensembl chr 2:182,014,326...182,040,787
JBrowse link
G Lrrc24 leucine rich repeat containing 24 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 7:108,437,296...108,444,561
Ensembl chr 7:108,437,296...108,444,438
JBrowse link
G Lrrc4b leucine rich repeat containing 4B involved_in ISO
IBA
(MGI:5294265|PMID:21940441)
GO_REF:0000033
RGD
GO_Central
PMID:21940441 GO_REF:0000033 MGI:5294265 NCBI chr 1:94,922,034...94,956,309
Ensembl chr 1:94,935,603...94,956,263
JBrowse link
G Lrrn1 leucine rich repeat neuronal 1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 4:140,476,752...140,520,210
Ensembl chr 4:140,476,324...140,518,620
JBrowse link
G Lrrn3 leucine rich repeat neuronal 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5576449|PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 MGI:5576449 NCBI chr 6:58,489,060...58,520,322
Ensembl chr 6:58,489,010...58,520,330
JBrowse link
G LRRTM1 leucine rich repeat transmembrane neuronal 1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 4:109,701,815...109,718,924
Ensembl chr 4:109,701,815...109,717,184
JBrowse link
G Lrrtm2 leucine rich repeat transmembrane neuronal 2 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr18:26,817,816...26,822,864
Ensembl chr18:26,817,816...26,822,864
JBrowse link
G Lrrtm3 leucine rich repeat transmembrane neuronal 3 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr20:24,515,627...24,689,669
Ensembl chr20:24,515,627...24,689,669
JBrowse link
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 4:112,545,874...113,338,713
Ensembl chr 4:112,545,917...113,335,865
JBrowse link
G Lrtm1 leucine-rich repeats and transmembrane domains 1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr16:4,210,343...4,217,843 JBrowse link
G Lrtm2 leucine-rich repeats and transmembrane domains 2 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 4:152,485,863...152,508,248
Ensembl chr 4:152,485,866...152,500,377
JBrowse link
G Nlgn1 neuroligin 1 involved_in
acts_upstream_of_or_within
IDA
IEA
ISO
PMID:17582332
GO_REF:0000107
(PMID:24613359)
(MGI:5002432|PMID:21356198)
PMID:15797875
Ensembl
RGD
PMID:21356198 PMID:24613359 PMID:17582332 PMID:15797875 GO_REF:0000107 MGI:5002432, RGD:8553502, RGD:8554205 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Nlgn2 neuroligin 2 involved_in IDA PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chr10:54,544,461...54,557,854
Ensembl chr10:54,544,588...54,558,434
JBrowse link
G Nlgn3 neuroligin 3 involved_in IDA
ISO
PMID:15797875
(MGI:5320268|PMID:21642956)
RGD PMID:21642956 PMID:15797875 MGI:5320268, RGD:8554205 NCBI chr  X:66,427,926...66,457,378
Ensembl chr  X:66,429,458...66,451,876
JBrowse link
G Nrxn1 neurexin 1 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
TAS
GO_REF:0000024
GO_REF:0000107
MGI:88281|MGI:88282 (MGI:5002432|PMID:21356198)
PMID:15797875
BHF-UCL
Ensembl
RGD
PMID:21356198 PMID:15797875 GO_REF:0000024 GO_REF:0000107 MGI:5002432, RGD:8554205 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 2:173,236,961...173,253,806
Ensembl chr 2:173,236,963...173,253,770
JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5576449|PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 MGI:5576449 NCBI chr17:5,558,992...5,870,299
Ensembl chr17:5,559,043...5,869,136
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 1:132,116,472...132,503,849
Ensembl chr 1:132,132,849...132,503,286
JBrowse link
G Oxt oxytocin/neurophysin I prepropeptide IDA RGD PMID:16488155 RGD:2304173 NCBI chr 3:117,782,650...117,783,490
Ensembl chr 3:117,782,650...117,783,490
JBrowse link
G Oxtr oxytocin receptor IMP RGD PMID:16488155 RGD:2304173 NCBI chr 4:145,598,549...145,614,674
Ensembl chr 4:145,599,561...145,614,674
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in IDA PMID:21414895 CACAO PMID:21414895 RGD:15023480 NCBI chr 2:32,878,942...32,963,668
Ensembl chr 2:32,882,032...32,963,631
JBrowse link
G Prkca protein kinase C, alpha IMP RGD PMID:18073185 RGD:2293299 NCBI chr10:92,889,390...93,288,013
Ensembl chr10:92,894,012...93,288,012
JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in ISO (MGI:5645611|PMID:25908590), (MGI:5902672|PMID:25989451) RGD PMID:25908590 PMID:25989451 MGI:5645611 MGI:5902672 NCBI chr 5:90,046,993...90,698,977
NCBI chr 5:91,122,354...91,641,754
Ensembl chr 5:90,048,966...92,369,396
JBrowse link
G Slit2 slit guidance ligand 2 IMP RGD PMID:26738857 RGD:243048441 NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
JBrowse link
G Slitrk1 SLIT and NTRK-like family, member 1 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:5576449|PMID:24613359)
GO_REF:0000033
RGD
GO_Central
PMID:24613359 GO_REF:0000033 MGI:5576449 NCBI chr15:85,723,252...85,727,290
Ensembl chr15:85,724,475...85,727,509
JBrowse link
G Slitrk2 SLIT and NTRK-like family, member 2 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:5576449|PMID:24613359)
GO_REF:0000033
(MGI:5902672|PMID:25989451)
RGD
GO_Central
PMID:24613359 PMID:25989451 GO_REF:0000033 MGI:5576449 MGI:5902672 NCBI chr  X:145,246,448...145,259,983
Ensembl chr  X:145,246,460...145,271,220
JBrowse link
G Slitrk3 SLIT and NTRK-like family, member 3 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:5576449|PMID:24613359)
GO_REF:0000033
RGD
GO_Central
PMID:24613359 GO_REF:0000033 MGI:5576449 NCBI chr 2:157,680,067...157,697,404
Ensembl chr 2:157,687,535...157,696,709
JBrowse link
G Slitrk4 SLIT and NTRK-like family, member 4 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr  X:142,706,495...142,718,968
Ensembl chr  X:142,706,338...142,718,575
JBrowse link
G Slitrk5 SLIT and NTRK-like family, member 5 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:5576449|PMID:24613359)
GO_REF:0000033
RGD
GO_Central
PMID:24613359 GO_REF:0000033 MGI:5576449 NCBI chr15:88,848,123...88,858,809
Ensembl chr15:88,847,535...88,856,836
JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:5576449|PMID:24613359)
GO_REF:0000033
RGD
GO_Central
PMID:24613359 GO_REF:0000033 MGI:5576449 NCBI chr15:87,563,506...87,570,125
Ensembl chr15:87,563,322...87,570,393
JBrowse link
G Srpx2 sushi-repeat-containing protein, X-linked 2 involved_in ISO
IBA
IDA
(PMID:24179158)
GO_REF:0000033
RGD
GO_Central
PMID:24179158 PMID:24179158 GO_REF:0000033, RGD:8553698 NCBI chr  X:97,106,455...97,132,197
Ensembl chr  X:97,106,561...97,132,195
JBrowse link
G St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 IMP RGD PMID:16887122 RGD:27372880 NCBI chr 1:127,762,573...127,838,017
Ensembl chr 1:127,762,573...127,838,091
JBrowse link
G Stau2 staufen double-stranded RNA binding protein 2 IMP RGD PMID:16418534 RGD:10043163 NCBI chr 5:2,840,741...3,084,935
Ensembl chr 5:2,840,765...3,084,929
JBrowse link
G Syndig1 synapse differentiation inducing 1 involved_in ISO
IBA
IMP
(PMID:20152115)
GO_REF:0000033
(MGI:4439218|PMID:20152115)
RGD
GO_Central
PMID:20152115 PMID:20152115 GO_REF:0000033 MGI:4439218, RGD:8554654 NCBI chr 3:138,030,995...138,234,646
Ensembl chr 3:138,031,769...138,198,122
JBrowse link
G Thbs2 thrombospondin 2 IMP RGD PMID:15707899 RGD:1580068 NCBI chr 1:55,670,394...55,699,789
Ensembl chr 1:55,670,394...55,699,789
JBrowse link
G Tpbg trophoblast glycoprotein acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 8:86,793,953...86,797,324
Ensembl chr 8:86,793,749...86,797,741
JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 IMP RGD PMID:12750002 RGD:1299567 NCBI chr11:85,304,528...85,338,430
Ensembl chr11:85,304,526...85,336,369
JBrowse link
G Wnt7a Wnt family member 7A involved_in
acts_upstream_of_or_within
ISO (PMID:18986540)
(MGI:1195230|PMID:9405095)
RGD PMID:9405095 PMID:18986540 MGI:1195230 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981
JBrowse link
positive regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrn agrin involved_in ISS
ISO
GO_REF:0000024
(MGI:1337916|PMID:10402191)
UniProt
RGD
PMID:10402191 GO_REF:0000024 MGI:1337916 NCBI chr 5:166,749,306...166,782,212
Ensembl chr 5:166,749,310...166,786,003
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in IMP PMID:25764078 CACAO PMID:25764078 RGD:15023478 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G Musk muscle associated receptor tyrosine kinase IMP RGD PMID:14749715 RGD:2317108 NCBI chr 5:73,058,427...73,169,696
Ensembl chr 5:73,058,121...73,171,932
JBrowse link
postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1ql2 complement C1q like 2 involved_in ISO (MGI:5829167|PMID:27133466) RGD PMID:27133466 MGI:5829167 NCBI chr13:31,471,150...31,472,685
Ensembl chr13:31,471,150...31,472,689
JBrowse link
G C1ql3 complement C1q like 3 involved_in ISO (MGI:5829167|PMID:27133466) RGD PMID:27133466 MGI:5829167 NCBI chr17:76,119,344...76,129,170
Ensembl chr17:76,119,447...76,128,530
JBrowse link
G Csmd2 CUB and Sushi multiple domains 2 involved_in ISO (MGI:6331195|PMID:31068362) RGD PMID:31068362 MGI:6331195 NCBI chr 5:140,342,352...140,912,422
Ensembl chr 5:140,342,376...140,912,234
JBrowse link
G Nptx1 neuronal pentraxin 1 involved_in EXP
IMP
IDA
PMID:29024665 SynGO PMID:29024665 PMID:29024665 PMID:29024665 RGD:13702141, RGD:13702141, RGD:13702141 NCBI chr10:104,811,107...104,820,358
Ensembl chr10:104,811,403...104,820,367
JBrowse link
G Nrxn3 neurexin 3 involved_in ISO
IEA
(MGI:5829167|PMID:27133466)
GO_REF:0000107
RGD
Ensembl
PMID:27133466 GO_REF:0000107 MGI:5829167 NCBI chr 6:107,641,760...109,272,849
Ensembl chr 6:107,641,780...109,272,044
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 involved_in IDA
EXP
PMID:21262467 SynGO PMID:21262467 PMID:21262467 RGD:13702219, RGD:13702219 NCBI chr 1:132,116,472...132,503,849
Ensembl chr 1:132,132,849...132,503,286
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3772418|PMID:18082964) RGD PMID:18082964 MGI:3772418 NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:4948759|PMID:21423165)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:21423165 GO_REF:0000024 GO_REF:0000107 MGI:4948759 NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374
JBrowse link
G Slitrk3 SLIT and NTRK-like family, member 3 acts_upstream_of_or_within ISO MGI:6119690 (MGI:6114383|PMID:29107521) RGD PMID:29107521 MGI:6114383 NCBI chr 2:157,680,067...157,697,404
Ensembl chr 2:157,687,535...157,696,709
JBrowse link
postsynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cel carboxyl ester lipase involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 3:11,883,532...11,891,035
Ensembl chr 3:11,883,532...11,891,035
JBrowse link
G Ephb2 Eph receptor B2 involved_in IMP
IEP
IDA
PMID:11136979 SynGO PMID:11136979 PMID:11136979 PMID:11136979 RGD:13702452, RGD:13702452, RGD:13702452 NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:5295488|PMID:22038977)
UniProt
RGD
PMID:22038977 GO_REF:0000024 MGI:5295488 NCBI chr 3:77,429,600...77,483,593
Ensembl chr 3:77,429,798...77,483,593
JBrowse link
G Nlgn1 neuroligin 1 involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107
(MGI:2665153|PMID:12796785), (MGI:5284797|PMID:15620359)
BHF-UCL
GO_Central
TreeGrafter
Ensembl
RGD
PMID:12796785 PMID:15620359 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:2665153 MGI:5284797 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Nlgn2 neuroligin 2 involved_in ISS
IEA
IBA
ISO
GO_REF:0000024
GO_REF:0000118
GO_REF:0000033
(MGI:5284797|PMID:15620359)
GO_REF:0000107
BHF-UCL
TreeGrafter
GO_Central
RGD
Ensembl
PMID:15620359 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:5284797 NCBI chr10:54,544,461...54,557,854
Ensembl chr10:54,544,588...54,558,434
JBrowse link
G Nlgn3 neuroligin 3 involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000118
(MGI:5320268|PMID:21642956)
BHF-UCL
GO_Central
TreeGrafter
RGD
PMID:21642956 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 MGI:5320268 NCBI chr  X:66,427,926...66,457,378
Ensembl chr  X:66,429,458...66,451,876
JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5284797|PMID:15620359), (MGI:5285129|PMID:21424692)
BHF-UCL
RGD
PMID:15620359 PMID:21424692 GO_REF:0000024 MGI:5284797 MGI:5285129 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
JBrowse link
G Nrxn2 neurexin 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5285129|PMID:21424692)
BHF-UCL
RGD
PMID:21424692 GO_REF:0000024 MGI:5285129 NCBI chr 1:203,726,420...203,842,301
Ensembl chr 1:203,735,753...203,842,297
JBrowse link
postsynaptic specialization assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crk CRK proto-oncogene, adaptor protein involved_in ISO (MGI:4837546|PMID:21041412) RGD PMID:21041412 MGI:4837546 NCBI chr10:60,530,469...60,556,703
Ensembl chr10:60,530,464...60,553,406
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein involved_in ISO (MGI:4837546|PMID:21041412) RGD PMID:21041412 MGI:4837546 NCBI chr11:83,528,788...83,563,214
Ensembl chr11:83,526,530...83,563,238
JBrowse link
G Dock7 dedicator of cytokinesis 7 involved_in ISO (MGI:4837546|PMID:21041412) RGD PMID:21041412 MGI:4837546 NCBI chr 5:113,599,371...113,782,871
Ensembl chr 5:113,600,198...113,782,813
JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO
IEA
(MGI:5284797|PMID:15620359)
GO_REF:0000107
RGD
Ensembl
PMID:15620359 GO_REF:0000107 MGI:5284797 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Nlgn2 neuroligin 2 involved_in ISO (MGI:4411943|PMID:19755106), (MGI:5284797|PMID:15620359) RGD PMID:15620359 PMID:19755106 MGI:4411943 MGI:5284797 NCBI chr10:54,544,461...54,557,854
Ensembl chr10:54,544,588...54,558,434
JBrowse link
G Nlgn3 neuroligin 3 involved_in IDA PMID:17897391 SynGO PMID:17897391 RGD:9831151 NCBI chr  X:66,427,926...66,457,378
Ensembl chr  X:66,429,458...66,451,876
JBrowse link
G Ntng2 netrin G2 involved_in ISO (MGI:3664681|PMID:16980967) RGD PMID:16980967 MGI:3664681 NCBI chr 3:12,492,574...12,551,104
Ensembl chr 3:12,492,639...12,545,890
JBrowse link
presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cadm1 cell adhesion molecule 1 involved_in ISO (MGI:2385986|PMID:12202822) RGD PMID:12202822 MGI:2385986 NCBI chr 8:47,847,836...48,178,703
Ensembl chr 8:47,847,325...48,182,833
JBrowse link
G Cntn5 contactin 5 involved_in IEA
ISO
GO_REF:0000107
(MGI:5635777|PMID:24411736)
Ensembl
RGD
PMID:24411736 GO_REF:0000107 MGI:5635777 NCBI chr 8:6,735,715...7,967,727
Ensembl chr 8:6,738,239...7,967,957
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in ISO (MGI:3653273|PMID:16818724) RGD PMID:16818724 MGI:3653273 NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664
JBrowse link
G Efnb1 ephrin B1 involved_in IMP
IDA
PMID:19915143 SynGO PMID:19915143 PMID:19915143 RGD:13702172, RGD:13702172 NCBI chr  X:64,257,351...64,270,158
Ensembl chr  X:64,257,351...64,270,157
JBrowse link
G Efnb2 ephrin B2 involved_in IMP
IDA
PMID:19915143 SynGO PMID:19915143 PMID:19915143 RGD:13702172, RGD:13702172 NCBI chr16:80,783,389...80,827,420
Ensembl chr16:80,783,417...80,824,391
JBrowse link
G Fzd5 frizzled class receptor 5 involved_in IDA
EXP
IMP
PMID:20530549 SynGO PMID:20530549 PMID:20530549 PMID:20530549 RGD:13702329, RGD:13702329, RGD:13702329 NCBI chr 9:66,113,096...66,120,276
Ensembl chr 9:66,113,112...66,121,457
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 acts_upstream_of_or_within ISO (MGI:5476874|PMID:23358245) RGD PMID:23358245 MGI:5476874 NCBI chr20:7,900,327...7,964,309
Ensembl chr20:7,904,358...7,963,471
JBrowse link
G Nlgn2 neuroligin 2 acts_upstream_of_or_within ISO (MGI:5476874|PMID:23358245) RGD PMID:23358245 MGI:5476874 NCBI chr10:54,544,461...54,557,854
Ensembl chr10:54,544,588...54,558,434
JBrowse link
G Nrxn1 neurexin 1 involved_in IMP
IEA
ISO
IDA
EXP
PMID:12796785
GO_REF:0000107
(MGI:5294741|PMID:21410790)
Ensembl
RGD
PMID:21410790 PMID:12796785 PMID:12796785 PMID:12796785 GO_REF:0000107 MGI:5294741, RGD:13702298, RGD:13702298, RGD:13702298 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in ISO (PMID:21926414) RGD PMID:21926414 NCBI chr 5:90,046,993...90,698,977
NCBI chr 5:91,122,354...91,641,754
Ensembl chr 5:90,048,966...92,369,396
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in IDA
EXP
IMP
PMID:21262467 SynGO PMID:21262467 PMID:21262467 PMID:21262467 RGD:13702219, RGD:13702219, RGD:13702219 NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
JBrowse link
G Sdcbp syndecan binding protein involved_in IDA
IMP
PMID:19915143 SynGO PMID:19915143 PMID:19915143 RGD:13702172, RGD:13702172 NCBI chr 5:19,473,499...19,517,188
Ensembl chr 5:19,489,961...19,527,572
JBrowse link
presynaptic active zone assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsn bassoon (presynaptic cytomatrix protein) involved_in IDA
IEA
IBA
PMID:22875941
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
PMID:22875941 GO_REF:0000033 GO_REF:0000118, RGD:14390063 NCBI chr 8:108,784,849...108,875,819
Ensembl chr 8:108,788,542...108,875,819
JBrowse link
G Pcdh17 protocadherin 17 acts_upstream_of_or_within ISO (MGI:5514320|PMID:23684785) RGD PMID:23684785 MGI:5514320 NCBI chr15:60,222,088...60,316,172
Ensembl chr15:60,222,004...60,313,999
JBrowse link
G Pclo piccolo (presynaptic cytomatrix protein) involved_in IDA
IBA
IEA
PMID:22875941
GO_REF:0000033
GO_REF:0000118
GO_Central
TreeGrafter
PMID:22875941 GO_REF:0000033 GO_REF:0000118, RGD:14390063 NCBI chr 4:19,691,439...20,050,015
Ensembl chr 4:19,695,315...20,049,885
JBrowse link
presynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cel carboxyl ester lipase involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 3:11,883,532...11,891,035
Ensembl chr 3:11,883,532...11,891,035
JBrowse link
G Il1rapl1 interleukin 1 receptor accessory protein-like 1 involved_in ISO (MGI:5294265|PMID:21940441) RGD PMID:21940441 MGI:5294265 NCBI chr  X:51,371,969...52,876,726
Ensembl chr  X:51,378,215...52,876,772
JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:5295488|PMID:22038977)
UniProt
RGD
PMID:22038977 GO_REF:0000024 MGI:5295488 NCBI chr 3:77,429,600...77,483,593
Ensembl chr 3:77,429,798...77,483,593
JBrowse link
G Nlgn1 neuroligin 1 involved_in IDA
IEA
IBA
ISO
PMID:19730411
GO_REF:0000118
GO_REF:0000033
(MGI:2665153|PMID:12796785), (MGI:3694190|PMID:10892652), (MGI:5284797|PMID:15620359)
PMID:15797875
TreeGrafter
GO_Central
RGD
PMID:10892652 PMID:12796785 PMID:15620359 PMID:19730411 PMID:15797875 GO_REF:0000033 GO_REF:0000118 MGI:2665153 MGI:3694190 MGI:5284797, RGD:8554379, RGD:8554205 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Nlgn2 neuroligin 2 involved_in IDA
IEA
IBA
ISO
PMID:15797875
GO_REF:0000118
GO_REF:0000033
(MGI:4352827|PMID:19016888), (MGI:5284797|PMID:15620359)
GO_REF:0000107
TreeGrafter
GO_Central
RGD
Ensembl
PMID:15620359 PMID:19016888 PMID:15797875 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:4352827 MGI:5284797, RGD:8554205 NCBI chr10:54,544,461...54,557,854
Ensembl chr10:54,544,588...54,558,434
JBrowse link
G Nlgn3 neuroligin 3 involved_in IDA
IBA
IEA
PMID:15797875
GO_REF:0000033
GO_REF:0000118
GO_Central
TreeGrafter
PMID:15797875 GO_REF:0000033 GO_REF:0000118, RGD:8554205 NCBI chr  X:66,427,926...66,457,378
Ensembl chr  X:66,429,458...66,451,876
JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:2665153|PMID:12796785)
BHF-UCL
RGD
PMID:12796785 GO_REF:0000024 MGI:2665153 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3772418|PMID:18082964) RGD PMID:18082964 MGI:3772418 NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838
JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in ISO (MGI:5294265|PMID:21940441) RGD PMID:21940441 MGI:5294265 NCBI chr 5:90,046,993...90,698,977
NCBI chr 5:91,122,354...91,641,754
Ensembl chr 5:90,048,966...92,369,396
JBrowse link
regulation of bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F11r F11 receptor involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr13:83,873,797...83,897,388
Ensembl chr13:83,873,797...83,897,402
JBrowse link
G Fzd5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3583769 (MGI:5494335|PMID:23610556)
Ensembl
RGD
PMID:23610556 GO_REF:0000107 MGI:5494335 NCBI chr 9:66,113,096...66,120,276
Ensembl chr 9:66,113,112...66,121,457
JBrowse link
G Gja1 gap junction protein, alpha 1 IMP RGD PMID:19509333 RGD:6784505 NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582
JBrowse link
G Gpbar1 G protein-coupled bile acid receptor 1 involved_in ISO (MGI:5297273|PMID:22046243) RGD PMID:22046243 MGI:5297273 NCBI chr 9:75,860,758...75,863,260
Ensembl chr 9:75,860,677...75,863,168
JBrowse link
G Myo1c myosin 1C involved_in ISO
IEA
(PMID:21402783)
GO_REF:0000107
RGD
Ensembl
PMID:21402783 GO_REF:0000107 NCBI chr10:60,498,372...60,520,752
Ensembl chr10:60,498,280...60,520,752
JBrowse link
G Nedd4l NEDD4 like E3 ubiquitin protein ligase acts_upstream_of_or_within ISO (MGI:4819049|PMID:20504882) RGD PMID:20504882 MGI:4819049 NCBI chr18:58,393,759...58,726,709
Ensembl chr18:58,393,509...58,723,137
JBrowse link
G Pkp2 plakophilin 2 IMP RGD PMID:19509333 RGD:6784505 NCBI chr11:84,661,783...84,727,730
Ensembl chr11:84,661,783...84,727,730
JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in ISO
IEA
(PMID:15905176)
GO_REF:0000107
RGD
Ensembl
PMID:15905176 GO_REF:0000107 NCBI chr19:24,155,081...24,178,430
Ensembl chr19:24,155,090...24,178,430
JBrowse link
G Prkch protein kinase C, eta involved_in ISO
ISS
(PMID:19114660)
GO_REF:0000024
RGD
UniProt
PMID:19114660 GO_REF:0000024 NCBI chr 6:92,292,000...92,490,663
Ensembl chr 6:92,292,000...92,490,654
JBrowse link
G Snai1 snail family transcriptional repressor 1 involved_in ISO (PMID:15314165) RGD PMID:15314165 NCBI chr 3:156,248,479...156,252,969
Ensembl chr 3:156,248,485...156,252,969
JBrowse link
G Snai2 snail family transcriptional repressor 2 involved_in ISO (PMID:15314165) RGD PMID:15314165 NCBI chr11:86,182,788...86,186,203
Ensembl chr11:86,181,909...86,186,200
JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr 1:118,849,838...119,094,492
Ensembl chr 1:118,849,838...119,094,432
JBrowse link
regulation of cell junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rap1a RAP1A, member of RAS oncogene family involved_in ISS
ISO
GO_REF:0000024
(PMID:21840392)
UniProt
RGD
PMID:21840392 GO_REF:0000024 NCBI chr 2:193,208,631...193,286,513
Ensembl chr 2:193,208,635...193,286,501
JBrowse link
G Rap1b RAP1B, member of RAS oncogene family involved_in ISO
ISS
(PMID:21840392)
GO_REF:0000024
RGD
UniProt
PMID:21840392 GO_REF:0000024 NCBI chr 7:53,423,039...53,456,349
Ensembl chr 7:53,423,130...53,456,370
JBrowse link
G Rapgef1 Rap guanine nucleotide exchange factor 1 involved_in ISO (PMID:21840392) RGD PMID:21840392 NCBI chr 3:12,898,349...13,016,234
Ensembl chr 3:12,898,266...13,013,984
JBrowse link
G Rapgef2 Rap guanine nucleotide exchange factor 2 involved_in ISO
ISS
(PMID:21840392)
GO_REF:0000024
RGD
UniProt
PMID:21840392 GO_REF:0000024 NCBI chr 2:164,207,513...164,322,157
Ensembl chr 2:164,207,513...164,244,247
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in IBA
IEA
GO_REF:0000033
GO_REF:0000118
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 6:39,679,116...39,774,033
Ensembl chr 6:39,679,082...39,774,031
JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr 1:118,849,838...119,094,492
Ensembl chr 1:118,849,838...119,094,432
JBrowse link
regulation of excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn3 calsyntenin 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:6445033|PMID:32434929)
UniProt
RGD
PMID:32434929 GO_REF:0000024 MGI:6445033 NCBI chr 4:157,331,494...157,364,769
Ensembl chr 4:157,331,494...157,364,769
JBrowse link
regulation of focal adhesion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actg1 actin, gamma 1 involved_in ISO
IEA
(PMID:25705373)
GO_REF:0000107
RGD
Ensembl
PMID:25705373 GO_REF:0000107 NCBI chr10:105,619,738...105,622,587
Ensembl chr10:105,619,737...105,624,232
Ensembl chr 3:105,619,737...105,624,232
JBrowse link
G Actg1l1 actin, gamma 1 like 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:72,977,767...72,979,691
Ensembl chr10:105,619,737...105,624,232
Ensembl chr 3:105,619,737...105,624,232
Ensembl chr 3:105,619,737...105,624,232
JBrowse link
G Camsap3 calmodulin regulated spectrin-associated protein family, member 3 involved_in ISO (PMID:27693509) RGD PMID:27693509 NCBI chr12:1,643,062...1,666,685
Ensembl chr12:1,643,251...1,666,685
JBrowse link
G Clasp1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr13:29,493,554...29,715,151
Ensembl chr13:29,493,596...29,715,146
JBrowse link
G Coro1c coronin 1C involved_in ISO UniProtKB:Q05397 (PMID:19913511) RGD PMID:19913511 NCBI chr12:42,713,024...42,785,179
Ensembl chr12:42,712,991...42,785,179
JBrowse link
G Dapk3 death-associated protein kinase 3 involved_in ISO
IEA
(PMID:23454120)
GO_REF:0000107
RGD
Ensembl
PMID:23454120 GO_REF:0000107 NCBI chr 7:8,524,182...8,532,552
Ensembl chr 7:8,524,183...8,532,558
JBrowse link
G Dusp3 dual specificity phosphatase 3 involved_in ISO (PMID:28759036)
(MGI:6101044|PMID:28759036)
RGD PMID:28759036 MGI:6101044 NCBI chr10:86,920,014...86,933,739
Ensembl chr10:86,920,014...86,933,962
JBrowse link
G Efna5 ephrin A5 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:11870224)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:11870224 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:102,316,753...102,595,480
Ensembl chr 9:102,320,295...102,597,413
JBrowse link
G Epha3 Eph receptor A3 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:11870224)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:11870224 GO_REF:0000024 GO_REF:0000107 NCBI chr11:1,138,485...1,474,102
Ensembl chr11:1,140,985...1,473,900
JBrowse link
G Gpm6b glycoprotein m6b involved_in ISO
ISS
(PMID:21638316)
GO_REF:0000024
RGD
UniProt
PMID:21638316 GO_REF:0000024 NCBI chr  X:28,057,788...28,204,409
Ensembl chr  X:28,059,450...28,204,211
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO (MGI:3834346|PMID:17077323) RGD PMID:17077323 MGI:3834346 NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082
JBrowse link
G Ldb1 LIM domain binding 1 involved_in ISO (MGI:5751678|PMID:19675209) RGD PMID:19675209 MGI:5751678 NCBI chr 1:244,864,168...244,890,007
Ensembl chr 1:244,877,173...244,890,013
JBrowse link
G Limch1 LIM and calponin homology domains 1 involved_in ISO
IBA
(PMID:28228547)
GO_REF:0000033
RGD
GO_Central
PMID:28228547 GO_REF:0000033 NCBI chr14:41,112,579...41,425,001
Ensembl chr14:41,114,803...41,425,191
JBrowse link
G Macf1 microtubule-actin crosslinking factor 1 involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000118
(MGI:3828223|PMID:18854161)
(PMID:27693509)
UniProt
GO_Central
TreeGrafter
RGD
PMID:18854161 PMID:27693509 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 MGI:3828223 NCBI chr 5:135,623,734...135,949,097
Ensembl chr 5:135,623,742...135,945,905
JBrowse link
G Peak1 pseudopodium-enriched atypical kinase 1 involved_in ISO (PMID:23105102) RGD PMID:23105102 NCBI chr 8:56,605,040...56,819,748
Ensembl chr 8:56,609,015...56,819,096
JBrowse link
G Ptk2 protein tyrosine kinase 2 involved_in ISO UniProtKB:Q9ULV4 (PMID:19913511) RGD PMID:19913511 NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
JBrowse link
G Ptpra protein tyrosine phosphatase, receptor type, A involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5442237|PMID:22801373)
UniProt
Ensembl
RGD
PMID:22801373 GO_REF:0000024 GO_REF:0000107 MGI:5442237 NCBI chr 3:117,650,146...117,759,744
Ensembl chr 3:117,650,183...117,759,728
JBrowse link
G Rhod ras homolog family member D involved_in ISO (MGI:5512821|PMID:23454120) RGD PMID:23454120 MGI:5512821 NCBI chr 1:201,708,699...201,724,405
Ensembl chr 1:201,708,699...201,722,632
JBrowse link
G Slk STE20-like kinase involved_in ISO
IEA
ISS
(PMID:23128389)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:23128389 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:246,473,712...246,529,643
Ensembl chr 1:246,473,712...246,526,530
JBrowse link
G Tsc1 TSC complex subunit 1 IMP RGD PMID:15611338 RGD:1601406 NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674
JBrowse link
G Vcl vinculin involved_in IEA
ISO
GO_REF:0000107
(PMID:26923917)
Ensembl
RGD
PMID:26923917 GO_REF:0000107 NCBI chr15:3,265,776...3,355,586
Ensembl chr15:3,265,815...3,355,606
JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:5558098 (MGI:5544506|PMID:24302887)
GO_REF:0000107
RGD
Ensembl
PMID:24302887 GO_REF:0000107 MGI:5544506 NCBI chr14:95,645,955...95,977,120
Ensembl chr14:95,646,038...95,977,113
JBrowse link
regulation of gap junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aplnr apelin receptor acts_upstream_of_or_within ISO (MGI:5584055|PMID:23603510) RGD PMID:23603510 MGI:5584055 NCBI chr 3:70,217,407...70,221,052
Ensembl chr 3:70,217,385...70,221,050
JBrowse link
regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhfpl4 LHFPL tetraspan subfamily member 4 involved_in ISO
ISS
(MGI:6201911|PMID:29742426)
GO_REF:0000024
RGD
UniProt
PMID:29742426 GO_REF:0000024 MGI:6201911 NCBI chr 4:146,317,110...146,340,073
Ensembl chr 4:146,313,541...146,340,463
JBrowse link
regulation of postsynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor involved_in ISO (MGI:6269821|PMID:29969655) RGD PMID:29969655 MGI:6269821 NCBI chr 1:53,905,344...54,034,216
Ensembl chr 1:53,905,373...54,034,216
JBrowse link
G Arhgap33 Rho GTPase activating protein 33 involved_in ISO (MGI:5532767|PMID:24003235) RGD PMID:24003235 MGI:5532767 NCBI chr 1:85,776,112...85,789,767
Ensembl chr 1:85,776,108...85,789,678
JBrowse link
G Arhgef15 Rho guanine nucleotide exchange factor 15 involved_in ISO (MGI:6151700|PMID:28185854) RGD PMID:28185854 MGI:6151700 NCBI chr10:53,650,521...53,663,269
Ensembl chr10:53,650,553...53,663,913
JBrowse link
G Asic1 acid sensing ion channel subunit 1 involved_in ISO (MGI:3692016|PMID:17060608) RGD PMID:17060608 MGI:3692016 NCBI chr 7:130,798,317...130,828,535
Ensembl chr 7:130,799,917...130,828,541
JBrowse link
G Asic2 acid sensing ion channel subunit 2 involved_in ISO (MGI:3851850|PMID:19571134) RGD PMID:19571134 MGI:3851850 NCBI chr10:65,870,592...66,940,577
Ensembl chr10:65,870,594...66,940,424
JBrowse link
G Carmil3 capping protein regulator and myosin 1 linker 3 involved_in ISO (MGI:6277806|PMID:30674877) RGD PMID:30674877 MGI:6277806 NCBI chr15:28,978,440...28,995,865
Ensembl chr15:28,979,007...28,996,225
JBrowse link
G Cc2d1a coiled-coil and C2 domain containing 1A involved_in ISO (MGI:5897730|PMID:26826102) RGD PMID:26826102 MGI:5897730 NCBI chr19:24,011,897...24,026,937
Ensembl chr19:24,011,938...24,026,936
JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (MGI:5300629|PMID:22153079) RGD PMID:22153079 MGI:5300629 NCBI chr 1:234,749,138...234,931,219
Ensembl chr 1:234,751,733...234,931,560
JBrowse link
G Crmp1 collapsin response mediator protein 1 involved_in ISO (MGI:3763966|PMID:18003833) RGD PMID:18003833 MGI:3763966 NCBI chr14:73,509,933...73,556,192
Ensembl chr14:73,509,933...73,556,177
JBrowse link
G Dclk1 doublecortin-like kinase 1 involved_in ISO (MGI:5546323|PMID:23385585) RGD PMID:23385585 MGI:5546323 NCBI chr 2:139,417,234...139,710,956
Ensembl chr 2:139,417,163...139,710,956
JBrowse link
G Dock10 dedicator of cytokinesis 10 involved_in ISO (MGI:5825418|PMID:25851601) RGD PMID:25851601 MGI:5825418 NCBI chr 9:81,843,599...82,101,540
Ensembl chr 9:81,843,604...82,101,525
JBrowse link
G Fam107a family with sequence similarity 107, member A involved_in ISO (MGI:6162291|PMID:21969592) RGD PMID:21969592 MGI:6162291 NCBI chr15:16,608,362...16,630,398
Ensembl chr15:16,607,205...16,630,396
JBrowse link
G Htr4 5-hydroxytryptamine receptor 4 involved_in ISO (MGI:6433383|PMID:32060357) RGD PMID:32060357 MGI:6433383 NCBI chr18:55,765,981...55,949,921
Ensembl chr18:55,766,725...55,949,321
JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in ISO (MGI:5883128|PMID:25407677) RGD PMID:25407677 MGI:5883128 NCBI chr 3:77,429,600...77,483,593
Ensembl chr 3:77,429,798...77,483,593
JBrowse link
G Lzts1 leucine zipper tumor suppressor 1 involved_in ISO (MGI:5698286|PMID:26490870) RGD PMID:26490870 MGI:5698286 NCBI chr16:20,542,756...20,598,204
Ensembl chr16:20,542,809...20,598,203
JBrowse link
G Lzts3 leucine zipper tumor suppressor family member 3 involved_in IDA
IMP
PMID:27252646 SynGO PMID:27252646 PMID:27252646 RGD:13210540, RGD:13210540 NCBI chr 3:117,850,286...117,861,132
Ensembl chr 3:117,851,702...117,860,081
JBrowse link
G Mark1 microtubule affinity regulating kinase 1 involved_in ISO (MGI:5904921|PMID:27829159) RGD PMID:27829159 MGI:5904921 NCBI chr13:96,450,189...96,555,304
Ensembl chr13:96,451,487...96,555,173
JBrowse link
G Nae1 NEDD8 activating enzyme E1 subunit 1 involved_in ISO (MGI:6159297|PMID:25581363) RGD PMID:25581363 MGI:6159297 NCBI chr19:446,015...472,145
Ensembl chr19:446,000...472,371
JBrowse link
G Nectin3 nectin cell adhesion molecule 3 involved_in ISO (MGI:6863355|PMID:28872640) RGD PMID:28872640 MGI:6863355 NCBI chr11:54,362,712...54,469,351
Ensembl chr11:54,364,487...54,462,519
JBrowse link
G Nedd8 NEDD8 ubiquitin like modifier involved_in ISO (MGI:6159297|PMID:25581363) RGD PMID:25581363 MGI:6159297 NCBI chr15:29,153,556...29,165,575
Ensembl chr15:29,153,556...29,166,160
JBrowse link
G Neurl1 neuralized E3 ubiquitin protein ligase 1 involved_in ISO (MGI:5300629|PMID:22153079) RGD PMID:22153079 MGI:5300629 NCBI chr 1:246,066,830...246,152,890
Ensembl chr 1:246,067,100...246,152,903
JBrowse link
G Nrxn2 neurexin 2 involved_in ISO (MGI:7428078|PMID:36608123) RGD PMID:36608123 MGI:7428078 NCBI chr 1:203,726,420...203,842,301
Ensembl chr 1:203,735,753...203,842,297
JBrowse link
G Numb NUMB, endocytic adaptor protein involved_in IDA
IMP
PMID:16394100 SynGO PMID:16394100 PMID:16394100 RGD:2302413, RGD:2302413 NCBI chr 6:103,431,400...103,553,422
Ensembl chr 6:103,431,400...103,553,354
JBrowse link
G Numbl NUMB-like, endocytic adaptor protein involved_in IDA
IMP
PMID:16394100 SynGO PMID:16394100 PMID:16394100 RGD:2302413, RGD:2302413 NCBI chr 1:82,549,814...82,573,788
Ensembl chr 1:82,550,054...82,573,776
JBrowse link
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B involved_in ISO (MGI:2181311|PMID:10922077) RGD PMID:10922077 MGI:2181311 NCBI chr10:79,938,055...79,954,085
Ensembl chr10:79,938,066...79,954,083
JBrowse link
G Psd pleckstrin and Sec7 domain containing involved_in IMP
IDA
PMID:16672654 SynGO PMID:16672654 PMID:16672654 RGD:8554141, RGD:8554141 NCBI chr 1:245,173,279...245,188,681
Ensembl chr 1:245,173,279...245,189,356
JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO (MGI:6343266|PMID:31369617) RGD PMID:31369617 MGI:6343266 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
JBrowse link
G Rac3 Rac family small GTPase 3 involved_in ISO (MGI:6343266|PMID:31369617) RGD PMID:31369617 MGI:6343266 NCBI chr10:106,002,808...106,005,243
Ensembl chr10:105,993,087...106,005,260
JBrowse link
G Sema4c semaphorin 4C involved_in ISO (MGI:6823237|PMID:31444474) RGD PMID:31444474 MGI:6823237 NCBI chr 9:38,791,668...38,802,171
Ensembl chr 9:38,791,670...38,802,128
JBrowse link
G Srgap3 SLIT-ROBO Rho GTPase activating protein 3 involved_in ISO (MGI:4941254|PMID:21325512) RGD PMID:21325512 MGI:4941254 NCBI chr 4:145,839,369...146,070,556
Ensembl chr 4:145,840,078...146,070,575
JBrowse link
G Ube2m ubiquitin-conjugating enzyme E2M involved_in ISO (MGI:6159297|PMID:25581363) RGD PMID:25581363 MGI:6159297 NCBI chr 1:73,662,576...73,666,113
Ensembl chr 1:73,662,576...73,666,026
JBrowse link
G Ube3b ubiquitin protein ligase E3B involved_in ISO (MGI:7439874|PMID:32249816) RGD PMID:32249816 MGI:7439874 NCBI chr12:42,183,756...42,230,094
Ensembl chr12:42,183,760...42,230,094
JBrowse link
G Usp9x ubiquitin specific peptidase 9, X-linked involved_in ISO (MGI:6435340|PMID:31813652) RGD PMID:31813652 MGI:6435340 NCBI chr  X:9,588,825...9,726,993
Ensembl chr  X:9,588,825...9,696,711
JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (MGI:6189342|PMID:26521016) RGD PMID:26521016 MGI:6189342 NCBI chr19:21,765,771...21,801,620
Ensembl chr19:21,765,749...21,801,618
JBrowse link
G Zdhhc8 zinc finger DHHC-type palmitoyltransferase 8 involved_in ISO (MGI:3818246|PMID:18836441) RGD PMID:18836441 MGI:3818246 NCBI chr11:82,755,110...82,769,280
Ensembl chr11:82,755,143...82,767,734
JBrowse link
regulation of postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi3bp ABI family member 3 binding protein involved_in IMP PMID:22485184 ARUK-UCL PMID:22485184 RGD:42721990 NCBI chr11:43,912,187...44,128,888
Ensembl chr11:43,913,043...44,128,929
JBrowse link
G Caskin1 CASK interacting protein 1 involved_in ISO (MGI:6479344|PMID:31727973) RGD PMID:31727973 MGI:6479344 NCBI chr10:13,512,684...13,533,380
Ensembl chr10:13,513,465...13,533,377
JBrowse link
G Cbln1 cerebellin 1 precursor involved_in ISO (MGI:4441214|PMID:20395510) RGD PMID:20395510 MGI:4441214 NCBI chr19:19,608,763...19,612,572
Ensembl chr19:19,608,716...19,612,572
JBrowse link
G Cript CXXC repeat containing interactor of PDZ3 domain involved_in IMP
IDA
PMID:10570482 SynGO PMID:10570482 PMID:10570482 RGD:8554363, RGD:8554363 NCBI chr 6:7,581,428...7,589,384
Ensembl chr 6:7,580,703...7,589,399
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 involved_in ISO (MGI:6445062|PMID:32324534) RGD PMID:32324534 MGI:6445062 NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in ISO (MGI:4441214|PMID:20395510) RGD PMID:20395510 MGI:4441214 NCBI chr 4:92,415,019...93,892,472
Ensembl chr 4:92,415,230...93,889,355
JBrowse link
G Il1rap interleukin 1 receptor accessory protein involved_in IEA
ISO
GO_REF:0000107
(MGI:5315316|PMID:22357843)
Ensembl
RGD
PMID:22357843 GO_REF:0000107 MGI:5315316 NCBI chr11:74,062,999...74,199,530
Ensembl chr11:74,070,304...74,199,530
JBrowse link
G Lrfn1 leucine rich repeat and fibronectin type III domain containing 1 involved_in IMP
IDA
PMID:16630835 SynGO PMID:16630835 PMID:16630835 RGD:13702351, RGD:13702351 NCBI chr 1:83,742,442...83,761,450
Ensembl chr 1:83,682,964...83,761,449
JBrowse link
G Lrfn4 leucine rich repeat and fibronectin type III domain containing 4 involved_in ISO
IBA
(MGI:4836132|PMID:20410109)
GO_REF:0000033
RGD
GO_Central
PMID:20410109 GO_REF:0000033 MGI:4836132 NCBI chr 1:201,888,569...201,891,861
Ensembl chr 1:201,888,569...201,891,861
JBrowse link
G Lrrc4b leucine rich repeat containing 4B involved_in IMP
IBA
IDA
PMID:19252495
GO_REF:0000033
GO_Central PMID:19252495 PMID:19252495 GO_REF:0000033, RGD:13702321, RGD:13702321 NCBI chr 1:94,922,034...94,956,309
Ensembl chr 1:94,935,603...94,956,263
JBrowse link
G LRRTM1 leucine rich repeat transmembrane neuronal 1 involved_in IMP
IDA
PMID:19285470 SynGO PMID:19285470 PMID:19285470 RGD:8554788, RGD:8554788 NCBI chr 4:109,701,815...109,718,924
Ensembl chr 4:109,701,815...109,717,184
JBrowse link
G Lrrtm2 leucine rich repeat transmembrane neuronal 2 involved_in IDA
IMP
PMID:19285470 SynGO PMID:19285470 PMID:19285470 RGD:8554788, RGD:8554788 NCBI chr18:26,817,816...26,822,864
Ensembl chr18:26,817,816...26,822,864
JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO (MGI:6445062|PMID:32324534) RGD PMID:32324534 MGI:6445062 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO
IEA
(MGI:5294741|PMID:21410790)
GO_REF:0000107
RGD
Ensembl
PMID:21410790 GO_REF:0000107 MGI:5294741 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in ISO (MGI:6787980|PMID:34613779) RGD PMID:34613779 MGI:6787980 NCBI chr 7:124,639,142...124,735,027
Ensembl chr 7:124,639,142...124,658,113
JBrowse link
G Prickle2 prickle planar cell polarity protein 2 involved_in ISO (MGI:6787980|PMID:34613779), (MGI:6822542|PMID:23711981) RGD PMID:23711981 PMID:34613779 MGI:6787980 MGI:6822542 NCBI chr 4:124,869,655...125,214,862
Ensembl chr 4:124,869,552...125,214,824
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in ISO (MGI:5921909|PMID:28555636) RGD PMID:28555636 MGI:5921909 NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282
JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in ISO
IDA
EXP
(MGI:5315316|PMID:22357843)
PMID:29024665
RGD PMID:22357843 PMID:29024665 PMID:29024665 MGI:5315316, RGD:13702141, RGD:13702141 NCBI chr 5:90,046,993...90,698,977
NCBI chr 5:91,122,354...91,641,754
Ensembl chr 5:90,048,966...92,369,396
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in IDA
IEA
ISO
IMP
EXP
PMID:21262467
GO_REF:0000107
(MGI:4887276|PMID:21262467)
Ensembl
RGD
PMID:21262467 PMID:21262467 PMID:21262467 PMID:21262467 GO_REF:0000107 MGI:4887276, RGD:13702219, RGD:13702219, RGD:13702219 NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
JBrowse link
G Sipa1l1 signal-induced proliferation-associated 1 like 1 involved_in IMP
IDA
PMID:11502259 SynGO PMID:11502259 PMID:11502259 RGD:8554032, RGD:8554032 NCBI chr 6:101,839,351...102,118,408
Ensembl chr 6:101,839,404...102,116,950
JBrowse link
regulation of postsynaptic specialization assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef9 Cdc42 guanine nucleotide exchange factor 9 involved_in ISO
IBA
(MGI:3722960|PMID:17690689)
GO_REF:0000033
RGD
GO_Central
PMID:17690689 GO_REF:0000033 MGI:3722960 NCBI chr  X:59,919,560...60,077,538
Ensembl chr  X:59,920,870...60,077,513
JBrowse link
G Gap43 growth associated protein 43 involved_in IDA
IMP
PMID:25755278 SynGO PMID:25755278 PMID:25755278 RGD:13702431, RGD:13702431 NCBI chr11:58,376,371...58,470,047
Ensembl chr11:58,376,371...58,470,045
JBrowse link
G Nptxr neuronal pentraxin receptor involved_in ISO (MGI:6189241|PMID:27986928) RGD PMID:27986928 MGI:6189241 NCBI chr 7:111,336,660...111,354,737
Ensembl chr 7:111,336,664...111,354,802
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (MGI:5284797|PMID:15620359) RGD PMID:15620359 MGI:5284797 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
JBrowse link
G Sptbn2 spectrin, beta, non-erythrocytic 2 involved_in ISO
IEA
(MGI:6189464|PMID:28576936)
GO_REF:0000107
RGD
Ensembl
PMID:28576936 GO_REF:0000107 MGI:6189464 NCBI chr 1:202,002,970...202,045,343
Ensembl chr 1:202,002,970...202,044,283
JBrowse link
G Wnt5a Wnt family member 5A involved_in IDA
IEP
IMP
PMID:19332546 SynGO PMID:19332546 PMID:19332546 PMID:19332546 RGD:155230776, RGD:155230776, RGD:155230776 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
JBrowse link
regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in ISO
IEA
(PMID:19726636)
GO_REF:0000107
RGD
Ensembl
PMID:19726636 GO_REF:0000107 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G Arf6 ADP-ribosylation factor 6 involved_in IMP
IDA
PMID:16672654 SynGO PMID:16672654 PMID:16672654 RGD:8554141, RGD:8554141 NCBI chr 6:87,853,742...87,854,890
Ensembl chr 6:87,840,142...87,874,114
JBrowse link
G Cbln1 cerebellin 1 precursor involved_in ISO (MGI:4441214|PMID:20395510), (MGI:5294741|PMID:21410790) RGD PMID:20395510 PMID:21410790 MGI:4441214 MGI:5294741 NCBI chr19:19,608,763...19,612,572
Ensembl chr19:19,608,716...19,612,572
JBrowse link
G Clstn3 calsyntenin 3 involved_in IEA
ISO
GO_REF:0000107
(MGI:5576449|PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 MGI:5576449 NCBI chr 4:157,331,494...157,364,769
Ensembl chr 4:157,331,494...157,364,769
JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma 1 involved_in ISO UniProtKB:Q21053 (PMID:25533483) RGD PMID:25533483 NCBI chr11:80,221,919...80,241,958
Ensembl chr11:80,221,919...80,241,941
JBrowse link
G Farp1 FERM, ARH/RhoGEF and pleckstrin domain protein 1 involved_in IMP
IDA
PMID:23209303 SynGO PMID:23209303 PMID:23209303 RGD:8554251, RGD:8554251 NCBI chr15:98,124,304...98,363,299
Ensembl chr15:98,182,329...98,363,299
JBrowse link
G Fzd1 frizzled class receptor 1 involved_in ISO
IEA
(MGI:6189468|PMID:19883499)
GO_REF:0000107
RGD
Ensembl
PMID:19883499 GO_REF:0000107 MGI:6189468 NCBI chr 4:29,310,303...29,314,701
Ensembl chr 4:29,310,091...29,312,643
Ensembl chr 4:29,310,091...29,312,643
JBrowse link
G Gpc4 glypican 4 involved_in IDA
IBA
IMP
PMID:23911103
GO_REF:0000033
GO_Central PMID:23911103 PMID:23911103 GO_REF:0000033, RGD:13702303, RGD:13702303 NCBI chr  X:131,644,711...131,755,349
Ensembl chr  X:131,644,704...131,755,284
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in IDA
IMP
PMID:21410790
PMID:20395510
SynGO PMID:21410790 PMID:21410790 PMID:20395510 PMID:20395510 RGD:13702257, RGD:13702257, RGD:13702347, RGD:13702347 NCBI chr 4:92,415,019...93,892,472
Ensembl chr 4:92,415,230...93,889,355
JBrowse link
G Igsf11 immunoglobulin superfamily, member 11 involved_in ISO (MGI:6816083|PMID:34261648) RGD PMID:34261648 MGI:6816083 NCBI chr11:61,733,139...61,884,059
Ensembl chr11:61,733,144...61,868,348
JBrowse link
G Il1rap interleukin 1 receptor accessory protein involved_in IEA
ISO
GO_REF:0000107
(MGI:5315316|PMID:22357843)
Ensembl
RGD
PMID:22357843 GO_REF:0000107 MGI:5315316 NCBI chr11:74,062,999...74,199,530
Ensembl chr11:74,070,304...74,199,530
JBrowse link
G Il1rapl1 interleukin 1 receptor accessory protein-like 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:21926414)
Ensembl
RGD
PMID:21926414 GO_REF:0000107 NCBI chr  X:51,371,969...52,876,726
Ensembl chr  X:51,378,215...52,876,772
JBrowse link
G Il1rapl2 interleukin 1 receptor accessory protein-like 2 involved_in ISO (PMID:21926414) RGD PMID:21926414 NCBI chr  X:100,961,509...102,271,753
Ensembl chr  X:100,961,812...102,271,753
JBrowse link
G Lrfn3 leucine rich repeat and fibronectin type III domain containing 3 involved_in IMP
IDA
PMID:27480238 SynGO PMID:27480238 PMID:27480238 RGD:13702184, RGD:13702184 NCBI chr 1:85,616,862...85,623,725
Ensembl chr 1:85,616,868...85,623,725
JBrowse link
G Lrfn4 leucine rich repeat and fibronectin type III domain containing 4 involved_in ISO
IBA
(MGI:4836132|PMID:20410109)
GO_REF:0000033
RGD
GO_Central
PMID:20410109 GO_REF:0000033 MGI:4836132 NCBI chr 1:201,888,569...201,891,861
Ensembl chr 1:201,888,569...201,891,861
JBrowse link
G Lrfn5 leucine rich repeat and fibronectin type III domain containing 5 involved_in ISO
IBA
(MGI:4836132|PMID:20410109)
GO_REF:0000033
RGD
GO_Central
PMID:20410109 GO_REF:0000033 MGI:4836132 NCBI chr 6:79,466,403...79,822,821
Ensembl chr 6:79,467,961...79,822,815
JBrowse link
G Lrrc4b leucine rich repeat containing 4B involved_in IDA
IBA
IMP
PMID:19252495
GO_REF:0000033
GO_Central PMID:19252495 PMID:19252495 GO_REF:0000033, RGD:13702321, RGD:13702321 NCBI chr 1:94,922,034...94,956,309
Ensembl chr 1:94,935,603...94,956,263
JBrowse link
G LRRTM1 leucine rich repeat transmembrane neuronal 1 involved_in IDA
IMP
PMID:19285470 SynGO PMID:19285470 PMID:19285470 RGD:8554788, RGD:8554788 NCBI chr 4:109,701,815...109,718,924
Ensembl chr 4:109,701,815...109,717,184
JBrowse link
G Lrrtm3 leucine rich repeat transmembrane neuronal 3 involved_in ISO (PMID:26776509) RGD PMID:26776509 NCBI chr20:24,515,627...24,689,669
Ensembl chr20:24,515,627...24,689,669
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO
IEA
(PMID:28641112)
GO_REF:0000107
RGD
Ensembl
PMID:28641112 GO_REF:0000107 NCBI chr20:7,900,327...7,964,309
Ensembl chr20:7,904,358...7,963,471
JBrowse link
G Mdga2 MAM domain containing glycosylphosphatidylinositol anchor 2 involved_in ISO (MGI:6109768|PMID:27608760) RGD PMID:27608760 MGI:6109768 NCBI chr 6:84,746,422...85,608,640
Ensembl chr 6:84,761,941...85,608,126
JBrowse link
G Nlgn2 neuroligin 2 involved_in IMP
IDA
PMID:10892652 SynGO PMID:10892652 PMID:10892652 RGD:13702379, RGD:13702379 NCBI chr10:54,544,461...54,557,854
Ensembl chr10:54,544,588...54,558,434
JBrowse link
G Nrg1 neuregulin 1 involved_in ISO (MGI:4443139|PMID:20393464) RGD PMID:20393464 MGI:4443139 NCBI chr16:59,250,658...60,304,519
Ensembl chr16:59,250,854...60,296,884
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO
IEA
(MGI:6189347|PMID:17360903)
GO_REF:0000107
RGD
Ensembl
PMID:17360903 GO_REF:0000107 MGI:6189347 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
JBrowse link
G Ntng2 netrin G2 involved_in ISO (MGI:3664681|PMID:16980967) RGD PMID:16980967 MGI:3664681 NCBI chr 3:12,492,574...12,551,104
Ensembl chr 3:12,492,639...12,545,890
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 involved_in IDA
IMP
PMID:21262467 SynGO PMID:21262467 PMID:21262467 RGD:13702219, RGD:13702219 NCBI chr 1:132,116,472...132,503,849
Ensembl chr 1:132,132,849...132,503,286
JBrowse link
G Slitrk1 SLIT and NTRK-like family, member 1 involved_in ISO (PMID:23345436) RGD PMID:23345436 NCBI chr15:85,723,252...85,727,290
Ensembl chr15:85,724,475...85,727,509
JBrowse link
G Slitrk2 SLIT and NTRK-like family, member 2 involved_in ISO (PMID:23345436) RGD PMID:23345436 NCBI chr  X:145,246,448...145,259,983
Ensembl chr  X:145,246,460...145,271,220
JBrowse link
G Slitrk3 SLIT and NTRK-like family, member 3 involved_in ISO (PMID:23345436)
(MGI:5776681|PMID:22286174)
RGD PMID:22286174 PMID:23345436 MGI:5776681 NCBI chr 2:157,680,067...157,697,404
Ensembl chr 2:157,687,535...157,696,709
JBrowse link
G Slitrk4 SLIT and NTRK-like family, member 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:142,706,495...142,718,968
Ensembl chr  X:142,706,338...142,718,575
JBrowse link
G Slitrk5 SLIT and NTRK-like family, member 5 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:88,848,123...88,858,809
Ensembl chr15:88,847,535...88,856,836
JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:87,563,506...87,570,125
Ensembl chr15:87,563,322...87,570,393
JBrowse link
G Snca synuclein alpha involved_in ISO
IEA
UniProtKB:Q21053 (PMID:25533483)
GO_REF:0000107
RGD
Ensembl
PMID:25533483 GO_REF:0000107 NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262
JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (PMID:19883499) RGD PMID:19883499 NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:20530549) RGD PMID:20530549 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981
JBrowse link
regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd4 chromodomain helicase DNA binding protein 4 involved_in IDA
IMP
PMID:24991957 SynGO PMID:24991957 PMID:24991957 RGD:9587770, RGD:9587770 NCBI chr 4:157,898,503...157,931,632
Ensembl chr 4:157,899,391...157,931,541
JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO MGI:2158714 (MGI:3699474|PMID:17301182) RGD PMID:17301182 MGI:3699474 NCBI chr 2:175,181,402...175,189,619
Ensembl chr 2:175,181,402...175,189,619
JBrowse link
G Clstn3 calsyntenin 3 involved_in ISO (PMID:33101212) RGD PMID:33101212 NCBI chr 4:157,331,494...157,364,769
Ensembl chr 4:157,331,494...157,364,769
JBrowse link
G Crtac1 cartilage acidic protein 1 involved_in ISO (MGI:6695451|PMID:33658590) RGD PMID:33658590 MGI:6695451 NCBI chr 1:241,091,679...241,233,677
Ensembl chr 1:241,078,864...241,233,421
JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISO