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ONTOLOGY REPORT - ANNOTATIONS

Term:apical junction assembly
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Accession:GO:0043297 term browser browse the term
Definition:The formation of an apical junction, a functional unit located near the cell apex at the points of contact between epithelial cells composed of the tight junction, the zonula adherens junction and the desmosomes, by the aggregation, arrangement and bonding together of its constituents.
Synonyms:exact_synonym: apical junction complex assembly


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apical junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cldn19 claudin 19 acts_upstream_of_or_within ISO MGI:3583804 (PMID:15883201) RGD PMID:15883201 NCBI chr 5:138,148,234...138,155,672 JBrowse link
G Ctnna1 catenin alpha 1 acts_upstream_of_or_within ISO MGI:2176173|MGI:2677796 (PMID:16543460), (PMID:22411810) RGD PMID:16543460 PMID:22411810 NCBI chr18:27,002,330...27,135,009 JBrowse link
G Fbf1 Fas binding factor 1 involved_in ISO (PMID:18838552) RGD PMID:18838552 NCBI chr10:101,874,661...101,900,497 JBrowse link
G Pkn2 protein kinase N2 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:20974804)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:20974804 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:234,454,001...234,559,369 JBrowse link
G Rhoa ras homolog family member A involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:20974804)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:20974804 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:117,870,548...117,904,303 JBrowse link
G Rhoc ras homolog family member C involved_in ISO (PMID:20974804) RGD PMID:20974804 NCBI chr 2:194,975,586...194,981,637 JBrowse link
G Vcl vinculin involved_in ISO
IEA		 (PMID:9700171)
GO_REF:0000107		 RGD
Ensembl		 PMID:9700171 GO_REF:0000107 NCBI chr15:3,315,069...3,404,891 JBrowse link
G Wdr1 WD repeat domain 1 involved_in ISO (PMID:25792565) RGD PMID:25792565 NCBI chr14:76,470,238...76,504,086 JBrowse link
bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn4 actinin alpha 4 involved_in ISO (PMID:18332111) RGD PMID:18332111 NCBI chr 1:93,310,294...93,379,369 JBrowse link
G Afdn afadin, adherens junction formation factor involved_in ISO (PMID:27815408) RGD PMID:27815408 NCBI chr 1:58,041,065...58,170,505 JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type NOT|involved_in ISO (PMID:17403930) RGD PMID:17403930 NCBI chr10:54,361,898...54,373,776 JBrowse link
G Aloxe3 arachidonate epidermal lipoxygenase 3 NOT|involved_in ISO (PMID:22832496) RGD PMID:22832496 NCBI chr10:54,329,224...54,353,167 JBrowse link
G Arl2 ARF like GTPase 2 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:212,863,422...212,875,425 JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within ISO MGI:2389020 (PMID:15775979) RGD PMID:15775979 NCBI chr19:51,402,178...51,471,572 JBrowse link
G Cdh5 cadherin 5 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr19:821,875...860,931 JBrowse link
G Cgn cingulin acts_upstream_of_or_within ISO (PMID:24385485) RGD PMID:24385485 NCBI chr 2:184,997,425...185,024,785 JBrowse link
G Cldn1 claudin 1 involved_in ISO
IBA		 (PMID:25849148), (PMID:26607202)
GO_REF:0000033		 RGD
GO_Central		 PMID:25849148 PMID:26607202 GO_REF:0000033 NCBI chr11:87,926,376...87,941,533 JBrowse link
G Cldn10 claudin 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:102,269,858...102,361,589 JBrowse link
G Cldn11 claudin 11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:114,136,234...114,149,539 JBrowse link
G Cldn14 claudin 14 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:46,701,940...46,799,049 JBrowse link
G Cldn15 claudin 15 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:25,334,849...25,345,104 JBrowse link
G Cldn16 claudin 16 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:87,795,106...87,814,396 JBrowse link
G Cldn17 claudin 17 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:41,313,675...41,314,851 JBrowse link
G Cldn18 claudin 18 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:109,125,819...109,145,110 JBrowse link
G Cldn19 claudin 19 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:138,148,234...138,155,672 JBrowse link
G Cldn2 claudin 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:108,248,383...108,258,847 JBrowse link
G Cldn20 claudin 20 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:46,539,039...46,539,698 JBrowse link
G Cldn22 claudin 22 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:51,155,058...51,156,084 JBrowse link
G Cldn24 claudin 24 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:51,157,524...51,158,186 JBrowse link
G Cldn25 claudin 25 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:58,288,411...58,289,145 JBrowse link
G Cldn3 claudin 3 involved_in IBA
ISO		 GO_REF:0000033
(PMID:20655293), (PMID:25849148)		 GO_Central
RGD		 PMID:20655293 PMID:25849148 GO_REF:0000033 NCBI chr12:27,345,075...27,346,547 JBrowse link
G Cldn34a claudin 34A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:25,164,586...25,233,074 JBrowse link
G Cldn34b claudin 34B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:44,396,219...44,402,241 JBrowse link
G Cldn34b4 claudin 34B4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:44,329,083...44,362,148 JBrowse link
G Cldn34c4 claudin 34C4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:94,391,092...94,396,766 JBrowse link
G Cldn34d claudin 34D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:44,473,389...44,481,870 JBrowse link
G Cldn34e claudin 34E involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:45,620,496...45,627,344 JBrowse link
G Cldn4 claudin 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:27,388,160...27,389,958 JBrowse link
G Cldn5 claudin 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:95,717,172...95,718,598 JBrowse link
G Cldn6 claudin 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:13,213,837...13,218,578 JBrowse link
G Cldn7 claudin 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:55,188,670...55,190,871 JBrowse link
G Cldn8 claudin 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:41,362,081...41,364,330 JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISO (PMID:8636221) RGD PMID:8636221 NCBI chr 8:129,517,576...129,544,661 JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in ISO
IEA		 (PMID:17332497)
GO_REF:0000107		 RGD
Ensembl		 PMID:17332497 GO_REF:0000107 NCBI chr11:82,416,853...82,607,797 JBrowse link
G Ect2 epithelial cell transforming 2 involved_in ISO (PMID:15254234) RGD PMID:15254234 NCBI chr 2:111,904,522...111,966,786 JBrowse link
G Esam endothelial cell adhesion molecule involved_in ISO (PMID:26607202) RGD PMID:26607202 NCBI chr 8:45,426,985...45,437,976 JBrowse link
G Frmpd2 FERM and PDZ domain containing 2 involved_in ISO (PMID:19706687) RGD PMID:19706687 NCBI chr16:8,763,889...8,883,558 JBrowse link
G Grhl2 grainyhead-like transcription factor 2 involved_in ISO (PMID:25152456) RGD PMID:25152456 NCBI chr 7:70,280,360...70,415,277 JBrowse link
G Itgb1 integrin subunit beta 1 IMP RGD PMID:18579774 RGD:2325293 NCBI chr19:73,602,277...73,650,271 JBrowse link
G Marveld2 MARVEL domain containing 2 involved_in ISO (PMID:20164257), (PMID:23073616) RGD PMID:20164257 PMID:23073616 NCBI chr 2:33,474,750...33,498,225 JBrowse link
G Marveld3 MARVEL domain containing 3 involved_in ISO (PMID:20164257) RGD PMID:20164257 NCBI chr19:54,818,180...54,832,871 JBrowse link
G Micall2 MICAL-like 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:18094055)		 UniProt
RGD		 PMID:18094055 GO_REF:0000024 NCBI chr12:20,013,037...20,041,795 JBrowse link
G Mpp7 MAGUK p55 scaffold protein 7 involved_in ISO
IEA		 (PMID:17332497)
GO_REF:0000107		 RGD
Ensembl		 PMID:17332497 GO_REF:0000107 NCBI chr17:60,135,096...60,401,814 JBrowse link
G Mtdh metadherin IEP RGD PMID:15383321 RGD:1359738 NCBI chr 7:67,192,592...67,250,819 JBrowse link
G Ocel1 occludin/ELL domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:18,076,428...18,079,068 JBrowse link
G Ocln occludin involved_in ISO
IBA		 (PMID:20164257), (PMID:26607202)
GO_REF:0000033		 RGD
GO_Central		 PMID:20164257 PMID:26607202 GO_REF:0000033 NCBI chr 2:33,391,303...33,442,207 JBrowse link
G Pak2 p21 (RAC1) activated kinase 2 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr11:82,212,896...82,273,803 JBrowse link
G Pard3 par-3 family cell polarity regulator involved_in IMP PMID:18082612 UniProt PMID:18082612 RGD:8553352 NCBI chr19:71,977,420...72,527,273 JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:27336173)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:27336173 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:122,469,223...122,524,993 JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 involved_in ISO
IEA		 (PMID:26607202)
GO_REF:0000107		 RGD
Ensembl		 PMID:26607202 GO_REF:0000107 NCBI chr10:92,090,263...92,152,002 JBrowse link
G Pof1b POF1B, actin binding protein involved_in ISO
IBA		 (PMID:21940798)
GO_REF:0000033		 RGD
GO_Central		 PMID:21940798 GO_REF:0000033 NCBI chr  X:81,875,348...81,942,046 JBrowse link
G Rab13 RAB13, member RAS oncogene family involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:12058051), (PMID:15096524)		 UniProt
Ensembl
RGD		 PMID:12058051 PMID:15096524 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:177,972,535...177,977,679 JBrowse link
G Ramp2 receptor activity modifying protein 2 involved_in ISO
ISS		 (PMID:18097473)
GO_REF:0000024		 RGD
UniProt		 PMID:18097473 GO_REF:0000024 NCBI chr10:86,689,148...86,690,956 JBrowse link
G Samt1 spermatogenesis associated multipass transmembrane protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:26,362,766...26,427,634 JBrowse link
G Samt2 spermatogenesis associated multipass transmembrane protein 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:26,845,413...26,898,389 JBrowse link
G Samt2l1 spermatogenesis associated multipass transmembrane protein 2 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:25,930,744...25,933,712 JBrowse link
G Samt2l2 spermatogenesis associated multipass transmembrane protein 2 like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:25,873,151...25,876,071 JBrowse link
G Samt2l3 spermatogenesis associated multipass transmembrane protein 2 like 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:25,294,178...25,299,103 JBrowse link
G Samt3 spermatogenesis associated multipass transmembrane protein 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:54,522,644...54,525,478 JBrowse link
G Samt4 spermatogenesis associated multipass transmembrane protein 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:26,173,282...26,176,055 JBrowse link
G Slc39a9 solute carrier family 39, member 9 involved_in IMP
IDA		 PMID:27164415
PMID:35625396		 UniProt PMID:27164415 PMID:35625396 RGD:155663545, RGD:155663535 NCBI chr 6:106,022,858...106,061,734 JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:2445832|MGI:3522206 (PMID:20047077) RGD PMID:20047077 NCBI chr 9:21,924,050...21,933,338 JBrowse link
G Tbcd tubulin folding cofactor D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:107,215,626...107,372,398 JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:8636221) RGD PMID:8636221 NCBI chr 1:128,260,330...128,505,018 JBrowse link
G Wnt11 Wnt family member 11 acts_upstream_of_or_within ISO MGI:2665014 (PMID:17767158) RGD PMID:17767158 NCBI chr 1:162,545,660...162,565,456 JBrowse link
negative regulation of bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta involved_in ISO
IEA		 (PMID:25816133)
GO_REF:0000107		 RGD
Ensembl		 PMID:25816133 GO_REF:0000107 NCBI chr16:76,021,968...76,075,717 JBrowse link
G Mir105 microRNA 105 acts_upstream_of ISO (PMID:24735924) RGD PMID:24735924 NCBI chr  X:155,480,841...155,480,913 JBrowse link
G Mir142 microRNA 142 involved_in ISO (PMID:27277258) RGD PMID:27277258 NCBI chr10:73,055,104...73,055,190 JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:O75116 (PMID:25816133)		 Ensembl
RGD		 PMID:25816133 GO_REF:0000107 NCBI chr18:1,387,360...1,509,218 JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:Q13464 (PMID:25816133)		 Ensembl
RGD		 PMID:25816133 GO_REF:0000107 NCBI chr 6:45,407,823...45,502,773 JBrowse link
G Rps6 ribosomal protein S6 IDA RGD PMID:25217631 RGD:11041641 NCBI chr 5:106,417,680...106,420,540 JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:25816133) RGD PMID:25816133 NCBI chr20:3,626,685...3,629,303 JBrowse link
positive regulation of bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvrl1 activin A receptor like type 1 involved_in ISO UniProtKB:Q9UK05 (PMID:32561494) RGD PMID:32561494 NCBI chr 7:134,117,917...134,135,306 JBrowse link
G Cdc45 cell division cycle 45 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr11:95,689,702...95,714,980 JBrowse link
G Cldn1 claudin 1 IMP RGD PMID:22684624 RGD:11341733 NCBI chr11:87,926,376...87,941,533 JBrowse link
G Cldn5 claudin 5 involved_in ISO (PMID:25323998) RGD PMID:25323998 NCBI chr11:95,717,172...95,718,598 JBrowse link
G Dsg3 desmoglein 3 involved_in ISO (PMID:22796473) RGD PMID:22796473 NCBI chr18:12,074,321...12,105,954 JBrowse link
G Epha2 Eph receptor A2 involved_in ISO (PMID:27815408) RGD PMID:27815408 NCBI chr 5:158,888,629...158,917,100 JBrowse link
G Gcg glucagon involved_in ISO (PMID:25050009) RGD PMID:25050009 NCBI chr 3:67,522,489...67,531,533 JBrowse link
G Gdf2 growth differentiation factor 2 involved_in ISO (PMID:32561494) RGD PMID:32561494 NCBI chr16:9,261,679...9,267,678 JBrowse link
G Il17a interleukin 17A involved_in IEA
ISO		 GO_REF:0000107
(PMID:26431948)		 Ensembl
RGD		 PMID:26431948 GO_REF:0000107 NCBI chr 9:30,640,844...30,644,331 JBrowse link
G Nphp1 nephrocystin 1 involved_in ISO (PMID:19755384) RGD PMID:19755384 NCBI chr 3:135,413,927...135,469,505 JBrowse link
G Nphp4 nephrocystin 4 involved_in ISO (PMID:19755384) RGD PMID:19755384 NCBI chr 5:168,270,522...168,356,393 JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO
ISS
IEA		 (PMID:22796473)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:22796473 GO_REF:0000024 GO_REF:0000107 NCBI chr12:16,150,411...16,170,864 JBrowse link
regulation of bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F11r F11 receptor involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr13:86,406,229...86,429,819 JBrowse link
G Fzd5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3583769 (PMID:23610556)		 Ensembl
RGD		 PMID:23610556 GO_REF:0000107 NCBI chr 9:73,606,860...73,614,039 JBrowse link
G Gja1 gap junction protein, alpha 1 IMP RGD PMID:19509333 RGD:6784505 NCBI chr20:36,302,490...36,315,010 JBrowse link
G Gpbar1 G protein-coupled bile acid receptor 1 involved_in ISO (PMID:22046243) RGD PMID:22046243 NCBI chr 9:83,309,895...83,312,397 JBrowse link
G Myo1c myosin 1C involved_in ISO
IEA		 (PMID:21402783)
GO_REF:0000107		 RGD
Ensembl		 PMID:21402783 GO_REF:0000107 NCBI chr10:60,996,642...61,019,022 JBrowse link
G Nedd4l NEDD4 like E3 ubiquitin protein ligase acts_upstream_of_or_within ISO (PMID:20504882) RGD PMID:20504882 NCBI chr18:60,663,918...60,996,824 JBrowse link
G Pkp2 plakophilin 2 IMP RGD PMID:19509333 RGD:6784505 NCBI chr11:98,165,974...98,231,916 JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in ISO
IEA		 (PMID:15905176)
GO_REF:0000107		 RGD
Ensembl		 PMID:15905176 GO_REF:0000107 NCBI chr19:41,059,843...41,083,189 JBrowse link
G Prkch protein kinase C, eta involved_in ISO
ISS		 (PMID:19114660)
GO_REF:0000024		 RGD
UniProt		 PMID:19114660 GO_REF:0000024 NCBI chr 6:98,027,830...98,226,486 JBrowse link
G Snai1 snail family transcriptional repressor 1 involved_in ISO (PMID:15314165) RGD PMID:15314165 NCBI chr 3:176,667,476...176,671,965 JBrowse link
G Snai2 snail family transcriptional repressor 2 involved_in ISO (PMID:15314165) RGD PMID:15314165 NCBI chr11:99,686,934...99,690,349 JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr 1:128,260,330...128,505,018 JBrowse link
zonula adherens assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi2 abl-interactor 2 involved_in ISO (PMID:15572692) RGD PMID:15572692 NCBI chr 9:69,321,072...69,490,630 JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 acts_upstream_of_or_within ISO MGI:3757646 (PMID:17765678) RGD PMID:17765678 NCBI chr15:125,287...237,334 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20533
    cellular process 19522
      cellular component organization or biogenesis 7187
        cellular component organization 6903
          cellular component assembly 3197
            cell junction assembly 573
              cell-cell junction assembly 174
                apical junction assembly 104
                  bicellular tight junction assembly + 95
                  septate junction assembly + 0
                  zonula adherens assembly 2
paths to the root