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sarcoplasmic reticulum - Ontology Report - Rat Genome Database

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ONTOLOGY REPORT - ANNOTATIONS

Term:sarcoplasmic reticulum
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Accession:GO:0016529 term browser browse the term
Definition:A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle cell; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage.
Comment:See also the cellular component terms 'sarcoplasm ; GO:0016528', 'nuclear envelope ; GO:0005635' and 'endoplasmic reticulum ; GO:0005783'.
Synonyms:alt_id: GO:0008221
 xref: Wikipedia:Endoplasmic_reticulum#Sarcoplasmic_reticulum

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sarcoplasmic reticulum term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07005775.1 located_in IEA GO_REF:0000043
GO_REF:0000107		 UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107
G Agl amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase IDA RGD PMID:15180797 RGD:1642741 NCBI chr 2:207,389,949...207,445,959
Ensembl chr 2:204,705,053...204,760,828 		JBrowse link
G Akap6 A-kinase anchoring protein 6 located_in
is_active_in		 IDA
IEA
IBA
ISO		 GO_REF:0000044
GO_REF:0000043
GO_REF:0000033
GO_REF:0000107
PMID:7721854
(PMID:10830164), (PMID:7721854)		 UniProt
GO_Central
Ensembl
RGD		 PMID:7721854 PMID:10830164 PMID:7721854 PMID:7721854 GO_REF:0000033 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107, RGD:6902944, RGD:6902944 NCBI chr 6:75,919,350...76,359,667
Ensembl chr 6:70,184,175...70,619,738 		JBrowse link
G Akap7 A-kinase anchoring protein 7 IDA RGD PMID:17901878 RGD:2312630 NCBI chr 1:21,906,503...22,168,663
Ensembl chr 1:20,087,373...20,217,797 		JBrowse link
G Akt2 AKT serine/threonine kinase 2 IDA MMO:0000662 RGD PMID:29676955 RGD:13703029 NCBI chr 1:92,004,705...92,061,420
Ensembl chr 1:82,883,547...82,933,817 		JBrowse link
G Ank1 ankyrin 1 IDA RGD PMID:12631729 PMID:9024692 RGD:633514, RGD:11251703 NCBI chr16:75,578,824...75,757,464
Ensembl chr16:68,877,504...69,054,759 		JBrowse link
G Ank3 ankyrin 3 IDA RGD PMID:9664041 RGD:631996 NCBI chr20:18,601,307...19,224,790
Ensembl chr20:18,602,786...19,086,300 		JBrowse link
G Asph aspartate-beta-hydroxylase located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:27,398,933...27,611,519
Ensembl chr 5:22,603,486...22,813,876 		JBrowse link
G Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 located_in TAS
IEA
ISO
ISS
IDA		 GO_REF:0000107
GO_REF:0000043
(PMID:11784029)
GO_REF:0000024		 Ensembl
UniProt
RGD		 PMID:11784029 PMID:12222829 PMID:8447366 PMID:19029185 PMID:12409282 GO_REF:0000024 GO_REF:0000043 GO_REF:0000107, RGD:727704, RGD:7241223, RGD:2313265, RGD:724593 NCBI chr 1:190,457,198...190,475,410
Ensembl chr 1:181,026,608...181,044,838 		JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 located_in TAS
IEA
ISO
IDA		 GO_REF:0000107
GO_REF:0000043
(PMID:22355118), (PMID:29475982), (PMID:9038922)
(PMID:12804600)
(PMID:16402920)		 Ensembl
UniProt
RGD		 PMID:9038922 PMID:12804600 PMID:16402920 PMID:22355118 PMID:29475982 More... GO_REF:0000043 GO_REF:0000107, RGD:70642, RGD:7241223, RGD:724593, RGD:2312630 NCBI chr12:39,733,519...39,782,942
Ensembl chr12:34,072,683...34,122,101 		JBrowse link
G Atp2a3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 located_in ISO
IEA		 (PMID:8809064)
GO_REF:0000043		 RGD
UniProt		 PMID:8809064 GO_REF:0000043 NCBI chr10:58,079,710...58,111,279
Ensembl chr10:57,582,128...57,612,748 		JBrowse link
G Cacna1s calcium voltage-gated channel subunit alpha1 S located_in IEA
ISO		 GO_REF:0000107
(PMID:12954602), (PMID:15536090), (PMID:16403451), (PMID:8943043)		 Ensembl
RGD		 PMID:8943043 PMID:12954602 PMID:15536090 PMID:16403451 GO_REF:0000107 NCBI chr13:50,045,668...50,115,903
Ensembl chr13:47,493,949...47,564,318 		JBrowse link
G Cacna2d1 calcium voltage-gated channel auxiliary subunit alpha2delta 1 located_in IEA
ISO		 GO_REF:0000107
(PMID:15536090)		 Ensembl
RGD		 PMID:15536090 GO_REF:0000107 NCBI chr 4:19,902,324...20,330,287
Ensembl chr 4:18,951,002...19,374,969 		JBrowse link
G Cacnb1 calcium voltage-gated channel auxiliary subunit beta 1 located_in ISO (PMID:8943043) RGD PMID:8943043 NCBI chr10:83,494,509...83,515,164
Ensembl chr10:82,998,182...83,018,694 		JBrowse link
G Calr calreticulin located_in IDA
IEA		 GO_REF:0000043 UniProt
RGD		 PMID:8600158 GO_REF:0000043, RGD:2313254 NCBI chr19:40,213,367...40,218,262
Ensembl chr19:23,308,351...23,313,414 		JBrowse link
G Calu calumenin located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:58,914,456...58,941,957
Ensembl chr 4:57,948,997...57,976,593 		JBrowse link
G Camk2b calcium/calmodulin-dependent protein kinase II beta located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:85,059,166...85,148,121
Ensembl chr14:80,845,238...80,933,994 		JBrowse link
G Camk2d calcium/calmodulin-dependent protein kinase II delta located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:217,698,324...217,961,898
Ensembl chr 2:215,024,004...215,286,178 		JBrowse link
G Camk2g calcium/calmodulin-dependent protein kinase II gamma located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:3,553,238...3,612,310
Ensembl chr15:3,504,085...3,563,050 		JBrowse link
G Car4 carbonic anhydrase 4 IDA RGD PMID:8911968 RGD:1600749 NCBI chr10:70,325,102...70,333,916
Ensembl chr10:69,827,945...69,836,501 		JBrowse link
G Casq1 calsequestrin 1 located_in IDA
IEA
ISO		 GO_REF:0000117
GO_REF:0000043
GO_REF:0000107
GO_REF:0000044
(PMID:12419813), (PMID:14728599), (PMID:7945294)		 UniProt
Ensembl
RGD		 PMID:7945294 PMID:12419813 PMID:14728599 PMID:19029185 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 GO_REF:0000117, RGD:2313265 NCBI chr13:87,203,021...87,212,710
Ensembl chr13:84,670,649...84,680,339 		JBrowse link
G Casq2 calsequestrin 2 located_in IDA
IEA
ISO		 GO_REF:0000117
GO_REF:0000043
(PMID:9287354)		 UniProt
RGD		 PMID:9287354 PMID:17569730 GO_REF:0000043 GO_REF:0000117, RGD:2314601 NCBI chr 2:192,214,556...192,270,821
Ensembl chr 2:189,525,960...189,582,267 		JBrowse link
G Ccdc78 coiled-coil domain containing 78 located_in ISO (PMID:22818856) RGD PMID:22818856 NCBI chr10:15,312,403...15,316,800
Ensembl chr10:14,807,710...14,812,282 		JBrowse link
G Col6a1 collagen type VI alpha 1 chain is_active_in ISO
IEA		 MGI:2153356 (PMID:22024752)
GO_REF:0000107		 RGD
Ensembl		 PMID:22024752 GO_REF:0000107 NCBI chr20:11,905,690...11,924,111
Ensembl chr20:11,905,957...11,924,597 		JBrowse link
G Dhrs7c dehydrogenase/reductase 7C located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:52,994,205...53,012,281
Ensembl chr10:52,495,262...52,513,338 		JBrowse link
G ENSRNOG00000067540 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr10:31,328,152...31,328,972 JBrowse link
G Fabp3 fatty acid binding protein 3 NOT IDA RGD PMID:2032944 RGD:1582411 NCBI chr 5:147,936,027...147,942,870
Ensembl chr 5:142,651,956...142,658,718 		JBrowse link
G Fkbp1a FKBP prolyl isomerase 1A located_in ISS
IEA		 GO_REF:0000024
GO_REF:0000043
GO_REF:0000044		 UniProt GO_REF:0000024 GO_REF:0000043 GO_REF:0000044 NCBI chr 3:160,500,748...160,520,492
Ensembl chr 3:140,040,278...140,060,743 		JBrowse link
G Fkbp1b FKBP prolyl isomerase 1B located_in ISO
IEA		 (PMID:19578067), (PMID:21788490)
GO_REF:0000043
GO_REF:0000044		 RGD
UniProt		 PMID:19578067 PMID:21788490 GO_REF:0000043 GO_REF:0000044 NCBI chr 6:33,551,583...33,570,055
Ensembl chr 6:27,838,802...27,848,653 		JBrowse link
G Gstm2 glutathione S-transferase mu 2 located_in ISO (PMID:22406107) RGD PMID:22406107 NCBI chr 2:198,312,179...198,316,962
Ensembl chr 2:195,544,426...195,628,961 		JBrowse link
G Gstm7 glutathione S-transferase, mu 7 located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:198,254,872...198,260,365
Ensembl chr 2:195,566,701...195,572,203 		JBrowse link
G H6pd hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) is_active_in ISO
IEA		 MGI:3624665 (PMID:18222920)
GO_REF:0000107		 RGD
Ensembl		 PMID:18222920 GO_REF:0000107 NCBI chr 5:165,717,456...165,753,158
Ensembl chr 5:160,438,697...160,470,171 		JBrowse link
G Hax1 HCLS1 associated protein X-1 part_of
located_in
is_active_in		 IDA
IEA
ISO
IBA		 PMID:19920172
GO_REF:0000044
GO_REF:0000107
GO_REF:0000043
(PMID:19920172)
GO_REF:0000033		 UniProt
Ensembl
RGD
GO_Central		 PMID:19920172 PMID:19920172 GO_REF:0000033 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107, RGD:10047287 NCBI chr 2:177,731,918...177,735,670
Ensembl chr 2:175,434,238...175,437,714 		JBrowse link
G Hk2 hexokinase 2 IDA MMO:0000662 RGD PMID:29676955 RGD:13703029 NCBI chr 4:116,792,258...116,841,275
Ensembl chr 4:115,234,509...115,283,530 		JBrowse link
G Hsp90b1 heat shock protein 90 beta family member 1 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:22,997,962...23,012,293
Ensembl chr 7:21,110,457...21,124,788 		JBrowse link
G Itpr1 inositol 1,4,5-trisphosphate receptor, type 1 located_in
is_active_in		 IDA
ISO
IBA
IEA		 (PMID:16014380)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:16014380 PMID:16014380 GO_REF:0000033 GO_REF:0000107, RGD:7175269 NCBI chr 4:142,743,401...143,066,505
Ensembl chr 4:141,187,418...141,510,491 		JBrowse link
G Itpr2 inositol 1,4,5-trisphosphate receptor, type 2 located_in
is_active_in		 IDA
ISO
IBA		 (PMID:16014380)
GO_REF:0000033		 RGD
GO_Central		 PMID:16014380 PMID:16014380 GO_REF:0000033, RGD:7175269 NCBI chr 4:180,759,325...181,165,361
Ensembl chr 4:179,027,281...179,404,164 		JBrowse link
G Itpr3 inositol 1,4,5-trisphosphate receptor, type 3 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:5,138,553...5,204,189
Ensembl chr20:5,136,441...5,202,337 		JBrowse link
G Jph1 junctophilin 1 is_active_in
located_in		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:10949023)		 GO_Central
Ensembl
RGD		 PMID:10949023 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:6,813,553...6,920,488
Ensembl chr 5:2,030,281...2,125,284 		JBrowse link
G Jph2 junctophilin 2 is_active_in
located_in		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
GO_REF:0000043
(PMID:10949023)		 GO_Central
Ensembl
UniProt
RGD		 PMID:10949023 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 NCBI chr 3:172,414,246...172,478,678
Ensembl chr 3:151,994,778...152,058,904 		JBrowse link
G Jsrp1 junctional sarcoplasmic reticulum protein 1 located_in
is_active_in		 ISO
IBA		 (PMID:12871958)
GO_REF:0000033		 RGD
GO_Central		 PMID:12871958 GO_REF:0000033 NCBI chr 7:9,539,997...9,556,730
Ensembl chr 7:8,901,609...8,906,055 		JBrowse link
G Klhl41 kelch-like family member 41 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:74,842,118...74,855,244
Ensembl chr 3:54,434,234...54,449,222 		JBrowse link
G Manf mesencephalic astrocyte-derived neurotrophic factor located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:116,427,053...116,430,259
Ensembl chr 8:107,548,352...107,551,438 		JBrowse link
G Mtmr12 myotubularin related protein 12 located_in IEA GO_REF:0000044
GO_REF:0000043		 UniProt GO_REF:0000043 GO_REF:0000044 NCBI chr 2:61,223,714...61,293,270
Ensembl chr 2:61,223,851...61,293,197 		JBrowse link
G Nol3 nucleolar protein 3 located_in IDA
IEA		 PMID:23382383
GO_REF:0000043
GO_REF:0000044		 UniProt PMID:23382383 GO_REF:0000043 GO_REF:0000044, RGD:10047354 NCBI chr19:50,066,493...50,068,175
Ensembl chr19:33,154,062...33,158,250 		JBrowse link
G Nos1 nitric oxide synthase 1 located_in ISO
IEA		 (PMID:9892689)
GO_REF:0000107		 RGD
Ensembl		 PMID:9892689 GO_REF:0000107 NCBI chr12:44,276,011...44,456,371
Ensembl chr12:38,626,714...38,710,945 		JBrowse link
G Nox4 NADPH oxidase 4 IDA MMO:0000679 RGD PMID:21896730 RGD:329849108 NCBI chr 1:150,313,736...150,491,480
Ensembl chr 1:140,901,097...141,077,406 		JBrowse link
G Oprk1 opioid receptor, kappa 1 IDA RGD PMID:26365878 RGD:401900132 NCBI chr 5:18,657,866...18,675,671
Ensembl chr 5:13,860,021...13,877,823 		JBrowse link
G Oprm1 opioid receptor, mu 1 located_in IDA RGD PMID:26686371 RGD:401831050 NCBI chr 1:45,565,371...45,818,722
Ensembl chr 1:43,160,057...43,413,409 		JBrowse link
G P3h2 prolyl 3-hydroxylase 2 located_in IEA GO_REF:0000044
GO_REF:0000043		 UniProt GO_REF:0000043 GO_REF:0000044 NCBI chr11:88,139,086...88,280,221
Ensembl chr11:74,634,267...74,775,421 		JBrowse link
G Pln phospholamban located_in
is_active_in		 IDA
IEA
ISO
IBA		 GO_REF:0000107
GO_REF:0000043
(PMID:9038922)
GO_REF:0000033		 Ensembl
UniProt
RGD
GO_Central		 PMID:9038922 PMID:12403631 PMID:17901878 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107, RGD:633528, RGD:2312630 NCBI chr20:33,166,512...33,182,241 JBrowse link
G Pomt1 protein-O-mannosyltransferase 1 located_in ISO
IEA		 (PMID:17456771)
GO_REF:0000107		 RGD
Ensembl		 PMID:17456771 GO_REF:0000107 NCBI chr 3:35,918,370...35,936,330
Ensembl chr 3:15,520,481...15,538,581 		JBrowse link
G Pygm glycogen phosphorylase, muscle associated IDA RGD PMID:12967914 PMID:11692172 RGD:1599989, RGD:1599897 NCBI chr 1:213,119,805...213,134,622
Ensembl chr 1:203,690,533...203,705,368 		JBrowse link
G Rasd1 ras related dexamethasone induced 1 located_in ISO
IEA		 (PMID:19800018)
GO_REF:0000107		 RGD
Ensembl		 PMID:19800018 GO_REF:0000107 NCBI chr10:45,265,975...45,275,279
Ensembl chr10:44,766,455...44,768,186 		JBrowse link
G Reep5 receptor accessory protein 5 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr18:26,219,528...26,257,505
Ensembl chr18:25,945,381...25,976,509 		JBrowse link
G Rtn2 reticulon 2 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:88,063,124...88,076,082
Ensembl chr 1:78,935,104...78,948,069 		JBrowse link
G Ryr1 ryanodine receptor 1 located_in IDA
IEA
ISO		 GO_REF:0000043
(PMID:11784029), (PMID:12954602), (PMID:15536090), (PMID:7832748), (PMID:8943043)
MMO:0000679		 UniProt
RGD		 PMID:7832748 PMID:8943043 PMID:11784029 PMID:12954602 PMID:15536090 More... GO_REF:0000043, RGD:7175256, RGD:329849108 NCBI chr 1:93,420,078...93,551,305
Ensembl chr 1:84,292,578...84,423,812 		JBrowse link
G Ryr2 ryanodine receptor 2 located_in IDA
IEA
ISO		 GO_REF:0000043
(PMID:12919952), (PMID:21788490), (PMID:22406107)
PMID:11590243
(PMID:10830164), (PMID:12919952)		 UniProt
RGD		 PMID:10830164 PMID:12919952 PMID:21788490 PMID:22406107 PMID:21807619 More... GO_REF:0000043, RGD:7175254, RGD:1599255 NCBI chr17:63,081,527...63,667,141
Ensembl chr17:58,389,925...58,975,142 		JBrowse link
G S100a1 S100 calcium binding protein A1 located_in
is_active_in		 ISO
IEA
IBA		 (PMID:12804600)
GO_REF:0000107
GO_REF:0000043
GO_REF:0000033
GO_REF:0000044		 RGD
Ensembl
UniProt
GO_Central		 PMID:12804600 GO_REF:0000033 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr 2:178,291,503...178,296,346
Ensembl chr 2:175,993,922...175,999,544 		JBrowse link
G S100a7l2 S100 calcium binding protein A7 like 2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:178,852,096...178,854,992
Ensembl chr 2:176,506,300...176,509,196
Ensembl chr 2:176,506,300...176,509,196 		JBrowse link
G S100vp S100 calcium-binding protein, ventral prostate is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:176,748,273...176,751,624
Ensembl chr 2:176,748,273...176,751,624 		JBrowse link
G Sar1a secretion associated, Ras related GTPase 1A located_in ISO (PMID:14728599) RGD PMID:14728599 NCBI chr20:30,166,310...30,178,718
Ensembl chr20:29,623,553...29,635,935 		JBrowse link
G Sgcd sarcoglycan, delta located_in ISO (PMID:16403451), (PMID:19931597) RGD PMID:16403451 PMID:19931597 NCBI chr10:31,847,713...32,829,554
Ensembl chr10:31,280,511...31,724,840 		JBrowse link
G Slc2a4 solute carrier family 2 member 4 IDA MMO:0000662 RGD PMID:29676955 RGD:13703029 NCBI chr10:55,164,721...55,170,289
Ensembl chr10:54,666,015...54,671,565 		JBrowse link
G Slc30a7 solute carrier family 30 member 7 located_in IEA GO_REF:0000044
GO_REF:0000043		 UniProt GO_REF:0000043 GO_REF:0000044 NCBI chr 2:203,855,484...203,922,155
Ensembl chr 2:203,859,175...203,922,132 		JBrowse link
G Sln sarcolipin located_in ISO
IEA
ISS		 (PMID:9575189)
GO_REF:0000043
GO_REF:0000024		 RGD
UniProt		 PMID:9575189 GO_REF:0000024 GO_REF:0000043 NCBI chr 8:63,117,577...63,144,290
Ensembl chr 8:54,243,542...54,247,791 		JBrowse link
G Stim1 stromal interaction molecule 1 located_in IEA GO_REF:0000044
GO_REF:0000043		 UniProt GO_REF:0000043 GO_REF:0000044 NCBI chr 1:166,067,450...166,230,733
Ensembl chr 1:156,656,013...156,818,363 		JBrowse link
G Syne2 spectrin repeat containing nuclear envelope protein 2 located_in ISO
IEA		 (PMID:15671068)
GO_REF:0000107		 RGD
Ensembl		 PMID:15671068 GO_REF:0000107 NCBI chr 6:100,272,729...100,586,364
Ensembl chr 6:94,537,088...94,848,064 		JBrowse link
G Thbs1 thrombospondin 1 located_in ISO (PMID:22682248) RGD PMID:22682248 NCBI chr 3:125,510,250...125,525,402
Ensembl chr 3:105,056,292...105,071,440 		JBrowse link
G Thbs4 thrombospondin 4 located_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000043
(PMID:22682248)
GO_REF:0000044		 UniProt
Ensembl
RGD		 PMID:22682248 GO_REF:0000024 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chr 2:25,718,219...25,760,345
Ensembl chr 2:23,983,158...24,026,313 		JBrowse link
G Tmem109 transmembrane protein 109 located_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:216,944,516...216,955,091
Ensembl chr 1:207,519,624...207,530,215 		JBrowse link
G Tmem38a transmembrane protein 38a located_in ISO
IEA		 (PMID:17611541)
GO_REF:0000043		 RGD
UniProt		 PMID:17611541 GO_REF:0000043 NCBI chr16:17,292,215...17,307,704
Ensembl chr16:17,258,164...17,273,415 		JBrowse link
G Trdn triadin located_in IDA
IEA
ISO		 GO_REF:0000043
GO_REF:0000002
(PMID:9287354)		 UniProt
InterPro
RGD		 PMID:9287354 PMID:21811790 GO_REF:0000002 GO_REF:0000043, RGD:7327228 NCBI chr 1:25,774,765...26,230,069
Ensembl chr 1:23,955,651...24,410,595 		JBrowse link
G Xdh xanthine dehydrogenase located_in IEA
ISO		 GO_REF:0000107
(PMID:19800018)		 Ensembl
RGD		 PMID:19800018 GO_REF:0000107 NCBI chr 6:27,282,319...27,344,022
Ensembl chr 6:21,530,113...21,592,268 		JBrowse link
junctional sarcoplasmic reticulum membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap6 A-kinase anchoring protein 6 located_in IDA PMID:12709444 BHF-UCL PMID:12709444 RGD:8554839 NCBI chr 6:75,919,350...76,359,667
Ensembl chr 6:70,184,175...70,619,738 		JBrowse link
G Asph aspartate-beta-hydroxylase located_in ISO (PMID:8530521) RGD PMID:8530521 NCBI chr 5:27,398,933...27,611,519
Ensembl chr 5:22,603,486...22,813,876 		JBrowse link
G Jph1 junctophilin 1 located_in ISO
IEA		 (PMID:10949023)
GO_REF:0000107		 RGD
Ensembl		 PMID:10949023 GO_REF:0000107 NCBI chr 5:6,813,553...6,920,488
Ensembl chr 5:2,030,281...2,125,284 		JBrowse link
G Reep5 receptor accessory protein 5 located_in ISO (PMID:32075961) RGD PMID:32075961 NCBI chr18:26,219,528...26,257,505
Ensembl chr18:25,945,381...25,976,509 		JBrowse link
G Trdn triadin is_active_in
located_in		 IDA
IBA		 GO_REF:0000033
PMID:22505613		 GO_Central
RGD		 PMID:7565919 PMID:22505613 GO_REF:0000033, RGD:2314606, RGD:7327226 NCBI chr 1:25,774,765...26,230,069
Ensembl chr 1:23,955,651...24,410,595 		JBrowse link
longitudinal sarcoplasmic reticulum term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 located_in ISO (PMID:16402920) RGD PMID:16402920 NCBI chr12:39,733,519...39,782,942
Ensembl chr12:34,072,683...34,122,101 		JBrowse link
G Dhrs7c dehydrogenase/reductase 7C located_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:21995425)		 UniProt
Ensembl
RGD		 PMID:21995425 GO_REF:0000024 GO_REF:0000107 NCBI chr10:52,994,205...53,012,281
Ensembl chr10:52,495,262...52,513,338 		JBrowse link
phospholamban complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pln phospholamban part_of ISO
IEA		 (PMID:16043693)
GO_REF:0000107		 RGD
Ensembl		 PMID:16043693 GO_REF:0000107 NCBI chr20:33,166,512...33,182,241 JBrowse link
ryanodine receptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fkbp1a FKBP prolyl isomerase 1A part_of ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 3:160,500,748...160,520,492
Ensembl chr 3:140,040,278...140,060,743 		JBrowse link
G Ryr1 ryanodine receptor 1 part_of ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:93,420,078...93,551,305
Ensembl chr 1:84,292,578...84,423,812 		JBrowse link
sarcoplasmic reticulum lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calr calreticulin located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr19:40,213,367...40,218,262
Ensembl chr19:23,308,351...23,313,414 		JBrowse link
G Calu calumenin located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:58,914,456...58,941,957
Ensembl chr 4:57,948,997...57,976,593 		JBrowse link
G Casq1 calsequestrin 1 located_in
is_active_in		 ISS
IEA
ISO
IBA		 GO_REF:0000024
GO_REF:0000044
GO_REF:0000107
(PMID:16600288), (PMID:22049211)
GO_REF:0000033		 UniProt
Ensembl
RGD
GO_Central		 PMID:16600288 PMID:22049211 GO_REF:0000024 GO_REF:0000033 GO_REF:0000044 GO_REF:0000107 NCBI chr13:87,203,021...87,212,710
Ensembl chr13:84,670,649...84,680,339 		JBrowse link
G Casq2 calsequestrin 2 located_in
is_active_in		 IEA
IBA
ISO		 GO_REF:0000044
GO_REF:0000033
(PMID:19920148)		 UniProt
GO_Central
RGD		 PMID:19920148 GO_REF:0000033 GO_REF:0000044 NCBI chr 2:192,214,556...192,270,821
Ensembl chr 2:189,525,960...189,582,267 		JBrowse link
G Hsp90b1 heat shock protein 90 beta family member 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:22,997,962...23,012,293
Ensembl chr 7:21,110,457...21,124,788 		JBrowse link
G Manf mesencephalic astrocyte-derived neurotrophic factor located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:116,427,053...116,430,259
Ensembl chr 8:107,548,352...107,551,438 		JBrowse link
sarcoplasmic reticulum membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07005775.1 located_in IEA GO_REF:0000044
GO_REF:0000107		 UniProt
Ensembl		 GO_REF:0000044 GO_REF:0000107
G Asph aspartate-beta-hydroxylase located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:27,398,933...27,611,519
Ensembl chr 5:22,603,486...22,813,876 		JBrowse link
G Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 located_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:25640239), (PMID:26816378)
GO_REF:0000107
GO_REF:0000044		 UniProt
RGD
Ensembl		 PMID:25640239 PMID:26816378 GO_REF:0000024 GO_REF:0000044 GO_REF:0000107 NCBI chr 1:190,457,198...190,475,410
Ensembl chr 1:181,026,608...181,044,838 		JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 located_in IC
IEA
ISO		 GO_REF:0000044
(PMID:16402920)		 UniProt
RGD		 PMID:16402920 PMID:21300842 GO_REF:0000044, RGD:6904139 NCBI chr12:39,733,519...39,782,942
Ensembl chr12:34,072,683...34,122,101 		JBrowse link
G Atp2a3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:58,079,710...58,111,279
Ensembl chr10:57,582,128...57,612,748 		JBrowse link
G Camk2b calcium/calmodulin-dependent protein kinase II beta located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr14:85,059,166...85,148,121
Ensembl chr14:80,845,238...80,933,994 		JBrowse link
G Camk2d calcium/calmodulin-dependent protein kinase II delta located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:217,698,324...217,961,898
Ensembl chr 2:215,024,004...215,286,178 		JBrowse link
G Camk2g calcium/calmodulin-dependent protein kinase II gamma located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr15:3,553,238...3,612,310
Ensembl chr15:3,504,085...3,563,050 		JBrowse link
G Casq1 calsequestrin 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr13:87,203,021...87,212,710
Ensembl chr13:84,670,649...84,680,339 		JBrowse link
G Cherp calcium homeostasis endoplasmic reticulum protein located_in IDA PMID:21454501 UniProt PMID:21454501 RGD:8554079 NCBI chr16:17,367,455...17,380,507
Ensembl chr16:17,367,455...17,380,507 		JBrowse link
G Dhrs7c dehydrogenase/reductase 7C located_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000044
(PMID:21995425), (PMID:22143674), (PMID:27806939)		 UniProt
Ensembl
RGD		 PMID:21995425 PMID:22143674 PMID:27806939 GO_REF:0000024 GO_REF:0000044 GO_REF:0000107 NCBI chr10:52,994,205...53,012,281
Ensembl chr10:52,495,262...52,513,338 		JBrowse link
G Dmpk DM1 protein kinase located_in ISO
IEA		 (PMID:15598648)
GO_REF:0000107		 RGD
Ensembl		 PMID:15598648 GO_REF:0000107 NCBI chr 1:87,858,294...87,868,624
Ensembl chr 1:78,730,275...78,740,593 		JBrowse link
G Fkbp1a FKBP prolyl isomerase 1A is_active_in
located_in		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000044
(PMID:14592808)		 GO_Central
UniProt
RGD		 PMID:14592808 GO_REF:0000033 GO_REF:0000044 NCBI chr 3:160,500,748...160,520,492
Ensembl chr 3:140,040,278...140,060,743 		JBrowse link
G Fkbp1b FKBP prolyl isomerase 1B is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:14592808), (PMID:16481613)		 GO_Central
RGD		 PMID:14592808 PMID:16481613 GO_REF:0000033 NCBI chr 6:33,551,583...33,570,055
Ensembl chr 6:27,838,802...27,848,653 		JBrowse link
G Hrc histidine rich calcium binding protein located_in ISO (PMID:16600288) RGD PMID:16600288 NCBI chr 1:104,949,750...104,953,475
Ensembl chr 1:95,813,253...95,816,984 		JBrowse link
G Itpr2 inositol 1,4,5-trisphosphate receptor, type 2 located_in ISO (PMID:10828023) RGD PMID:10828023 NCBI chr 4:180,759,325...181,165,361
Ensembl chr 4:179,027,281...179,404,164 		JBrowse link
G Jph2 junctophilin 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:172,414,246...172,478,678
Ensembl chr 3:151,994,778...152,058,904 		JBrowse link
G Klhl41 kelch-like family member 41 located_in
is_active_in		 ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000044
GO_REF:0000033
(PMID:24268659)		 UniProt
GO_Central
RGD		 PMID:24268659 GO_REF:0000024 GO_REF:0000033 GO_REF:0000044 NCBI chr 3:74,842,118...74,855,244
Ensembl chr 3:54,434,234...54,449,222 		JBrowse link
G Mrln myoregulin located_in ISO
IEA		 (PMID:25640239)
GO_REF:0000107		 RGD
Ensembl		 PMID:25640239 GO_REF:0000107 NCBI chr20:18,405,858...18,422,874
Ensembl chr20:18,406,707...18,428,418 		JBrowse link
G Nos1 nitric oxide synthase 1 located_in ISO
IEA		 (PMID:19800018)
GO_REF:0000107		 RGD
Ensembl		 PMID:19800018 GO_REF:0000107 NCBI chr12:44,276,011...44,456,371
Ensembl chr12:38,626,714...38,710,945 		JBrowse link
G Nos1ap nitric oxide synthase 1 adaptor protein located_in ISO (PMID:19800018) RGD PMID:19800018 NCBI chr13:85,080,558...85,353,741
Ensembl chr13:82,530,577...82,820,949 		JBrowse link
G Pln phospholamban located_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000044
(PMID:26816378)		 UniProt
Ensembl
RGD		 PMID:26816378 GO_REF:0000024 GO_REF:0000044 GO_REF:0000107 NCBI chr20:33,166,512...33,182,241 JBrowse link
G Reep5 receptor accessory protein 5 located_in ISO
IEA		 (PMID:32075961)
GO_REF:0000044		 RGD
UniProt		 PMID:32075961 GO_REF:0000044 NCBI chr18:26,219,528...26,257,505
Ensembl chr18:25,945,381...25,976,509 		JBrowse link
G Rtn2 reticulon 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:88,063,124...88,076,082
Ensembl chr 1:78,935,104...78,948,069 		JBrowse link
G Ryr1 ryanodine receptor 1 located_in
is_active_in		 IDA
IEA
ISO
IBA		 PMID:21454501
GO_REF:0000107
GO_REF:0000044
(PMID:14592808), (PMID:18003898)
GO_REF:0000033
PMID:11316255
GO_REF:0000117
(PMID:7556644)		 Ensembl
UniProt
RGD
GO_Central		 PMID:7556644 PMID:14592808 PMID:18003898 PMID:21454501 PMID:11316255 GO_REF:0000033 GO_REF:0000044 GO_REF:0000107 GO_REF:0000117, RGD:8554079, RGD:12903237 NCBI chr 1:93,420,078...93,551,305
Ensembl chr 1:84,292,578...84,423,812 		JBrowse link
G Ryr2 ryanodine receptor 2 located_in
is_active_in		 IDA
IEA
ISO
IBA
ISS		 PMID:11053140
GO_REF:0000044
(PMID:14592808), (PMID:16481613)
GO_REF:0000033
GO_REF:0000024
GO_REF:0000117		 UniProt
RGD
GO_Central		 PMID:14592808 PMID:16481613 PMID:11053140 GO_REF:0000024 GO_REF:0000033 GO_REF:0000044 GO_REF:0000117, RGD:8554533 NCBI chr17:63,081,527...63,667,141
Ensembl chr17:58,389,925...58,975,142 		JBrowse link
G Ryr3 ryanodine receptor 3 located_in ISO (PMID:14592808) RGD PMID:14592808 NCBI chr 3:119,886,129...120,433,465
Ensembl chr 3:99,432,505...99,704,961 		JBrowse link
G Slc30a7 solute carrier family 30 member 7 located_in IDA PMID:28232492 UniProt PMID:28232492 RGD:155888558 NCBI chr 2:203,855,484...203,922,155
Ensembl chr 2:203,859,175...203,922,132 		JBrowse link
G Sln sarcolipin located_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000044
(PMID:26816378)		 UniProt
Ensembl
RGD		 PMID:26816378 GO_REF:0000024 GO_REF:0000044 GO_REF:0000107 NCBI chr 8:63,117,577...63,144,290
Ensembl chr 8:54,243,542...54,247,791 		JBrowse link
G Stim1 stromal interaction molecule 1 located_in ISS
ISO		 GO_REF:0000024
(PMID:25326555)		 UniProt
RGD		 PMID:25326555 GO_REF:0000024 NCBI chr 1:166,067,450...166,230,733
Ensembl chr 1:156,656,013...156,818,363 		JBrowse link
G Strit1 small transmembrane regulator of ion transport 1 located_in ISO (PMID:26816378) RGD PMID:26816378 NCBI chr 2:150,084,857...150,087,721
Ensembl chr 2:147,935,222...147,938,083 		JBrowse link
G Tmem109 transmembrane protein 109 located_in ISS
IEA		 GO_REF:0000024
GO_REF:0000044		 UniProt GO_REF:0000024 GO_REF:0000044 NCBI chr 1:216,944,516...216,955,091
Ensembl chr 1:207,519,624...207,530,215 		JBrowse link
G Tmem38a transmembrane protein 38a located_in ISS
IEA		 GO_REF:0000024
GO_REF:0000044		 UniProt GO_REF:0000024 GO_REF:0000044 NCBI chr16:17,292,215...17,307,704
Ensembl chr16:17,258,164...17,273,415 		JBrowse link
G Trdn triadin located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:25,774,765...26,230,069
Ensembl chr 1:23,955,651...24,410,595 		JBrowse link
terminal cisterna term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casq1 calsequestrin 1 IDA RGD PMID:11010809 RGD:2313244 NCBI chr13:87,203,021...87,212,710
Ensembl chr13:84,670,649...84,680,339 		JBrowse link
G Rtn2 reticulon 2 part_of
located_in		 ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:19720795)		 UniProt
Ensembl
RGD		 PMID:19720795 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:88,063,124...88,076,082
Ensembl chr 1:78,935,104...78,948,069 		JBrowse link
G Ryr1 ryanodine receptor 1 located_in IDA PMID:11316255 UniProt PMID:11316255 RGD:12903237 NCBI chr 1:93,420,078...93,551,305
Ensembl chr 1:84,292,578...84,423,812 		JBrowse link
terminal cisterna lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casq1 calsequestrin 1 IDA RGD PMID:6355123 RGD:2313258 NCBI chr13:87,203,021...87,212,710
Ensembl chr13:84,670,649...84,680,339 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21366
    cellular anatomical structure 21071
      cytoplasm 12301
        endoplasmic reticulum 1913
          sarcoplasmic reticulum 81
            longitudinal sarcoplasmic reticulum + 2
            sarcoplasmic reticulum lumen + 6
            sarcoplasmic reticulum membrane + 36
            terminal cisterna + 3
Path 2
Term Annotations click to browse term
  cellular_component 21366
    cellular anatomical structure 21071
      organelle 14293
        membrane-bounded organelle 12863
          intracellular membrane-bounded organelle 12309
            endoplasmic reticulum 1913
              sarcoplasmic reticulum 81
                longitudinal sarcoplasmic reticulum + 2
                sarcoplasmic reticulum lumen + 6
                sarcoplasmic reticulum membrane + 36
                terminal cisterna + 3
paths to the root