Sar1a (secretion associated, Ras related GTPase 1A) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Sar1a (secretion associated, Ras related GTPase 1A) Rattus norvegicus
Analyze
Symbol: Sar1a (Ensembl: Ppa1)
Name: secretion associated, Ras related GTPase 1A (Ensembl:inorganic pyrophosphatase 1)
RGD ID: 1359540
Description: Predicted to enable G protein activity and amino acid sensor activity. Predicted to be involved in COPII-coated vesicle budding; cellular response to leucine starvation; and negative regulation of TORC1 signaling. Predicted to act upstream of or within negative regulation of cargo loading into COPII-coated vesicle and vesicle-mediated transport. Predicted to be located in Golgi apparatus and sarcoplasmic reticulum. Predicted to be part of COPII vesicle coat. Predicted to be active in endoplasmic reticulum exit site and lysosomal membrane. Orthologous to several human genes including PPA1 (inorganic pyrophosphatase 1); PARTICIPATES IN Endoplasmic Reticulum-associated degradation pathway; INTERACTS WITH 17beta-hydroxy-5alpha-androstan-3-one; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: GTP-binding protein SAR1a; MGC94305; SAR1 gene homolog A; SAR1 gene homolog A (S. cerevisiae); SAR1 homolog A; SAR1 homolog A (S. cerevisiae); SAR1a gene homolog 1; Sara1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82030,166,310 - 30,178,718 (+)NCBIGRCr8
mRatBN7.22029,623,529 - 29,635,935 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2029,623,553 - 29,635,935 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2030,634,514 - 30,646,921 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02030,025,721 - 30,038,128 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02030,768,209 - 30,780,615 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02031,298,269 - 31,310,676 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2031,265,483 - 31,310,674 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02033,095,744 - 33,108,151 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42029,048,217 - 29,060,624 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12029,062,016 - 29,074,422 (+)NCBI
Celera2031,051,009 - 31,063,416 (+)NCBICelera
Cytogenetic Map20q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-hydroxy-5alpha-androstan-3-one  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (EXP)
2-methylcholine  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
6-propyl-2-thiouracil  (EXP)
actinomycin D  (ISO)
aflatoxin B1  (ISO)
Aflatoxin B2 alpha  (ISO)
amitrole  (EXP)
Aroclor 1254  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol AF  (ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
cadmium dichloride  (EXP)
carbon nanotube  (ISO)
chlormequat chloride  (EXP)
choline  (ISO)
clobetasol  (ISO)
cocaine  (EXP)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
dicrotophos  (ISO)
dimethylarsinous acid  (ISO)
diquat  (ISO)
disodium selenite  (ISO)
endosulfan  (EXP)
ethanol  (ISO)
folic acid  (ISO)
glafenine  (EXP)
indometacin  (ISO)
isoflurane  (ISO)
ivermectin  (ISO)
L-methionine  (ISO)
methimazole  (EXP)
N-hydroxy-PhIP  (EXP)
N-nitrosodimethylamine  (EXP)
nickel atom  (ISO)
nickel dichloride  (ISO)
Nutlin-3  (ISO)
paracetamol  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (ISO)
pirinixic acid  (ISO)
piroxicam  (ISO)
propiconazole  (ISO)
resveratrol  (ISO)
sodium arsenite  (ISO)
Soman  (EXP)
sulfadimethoxine  (EXP)
tamoxifen  (ISO)
tert-butyl hydroperoxide  (ISO)
testosterone  (ISO)
tetrachloromethane  (ISO)
titanium dioxide  (ISO)
topotecan  (ISO)
trichloroethene  (EXP)
triptonide  (ISO)
valproic acid  (ISO)
zearalenone  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
4. GOA pipeline RGD automated data pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. Comprehensive gene review and curation RGD comprehensive gene curation
7. Molecular analysis of SAR1-related cDNAs from a mouse pituitary cell line. Shen KA, etal., FEBS Lett 1993 Dec 13;335(3):380-5.
8. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:14728599   PMID:17499046   PMID:18843296   PMID:19966784   PMID:20086016   PMID:21111843   PMID:22484643   PMID:23376485   PMID:23580231   PMID:31505169  


Genomics

Comparative Map Data
Sar1a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82030,166,310 - 30,178,718 (+)NCBIGRCr8
mRatBN7.22029,623,529 - 29,635,935 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2029,623,553 - 29,635,935 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2030,634,514 - 30,646,921 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02030,025,721 - 30,038,128 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02030,768,209 - 30,780,615 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02031,298,269 - 31,310,676 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2031,265,483 - 31,310,674 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02033,095,744 - 33,108,151 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42029,048,217 - 29,060,624 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12029,062,016 - 29,074,422 (+)NCBI
Celera2031,051,009 - 31,063,416 (+)NCBICelera
Cytogenetic Map20q11NCBI
SAR1A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381070,147,289 - 70,170,514 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1070,147,289 - 70,170,523 (-)EnsemblGRCh38hg38GRCh38
GRCh371071,907,045 - 71,930,270 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361071,579,966 - 71,600,275 (-)NCBINCBI36Build 36hg18NCBI36
Build 341071,579,968 - 71,600,272NCBI
Celera1065,189,062 - 65,209,379 (-)NCBICelera
Cytogenetic Map10q22.1NCBI
HuRef1065,902,444 - 65,922,781 (-)NCBIHuRef
CHM1_11072,192,010 - 72,212,333 (-)NCBICHM1_1
T2T-CHM13v2.01071,016,210 - 71,039,455 (-)NCBIT2T-CHM13v2.0
Sar1a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391061,516,096 - 61,529,076 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1061,516,078 - 61,529,076 (+)EnsemblGRCm39 Ensembl
GRCm381061,680,285 - 61,693,297 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1061,680,299 - 61,693,297 (+)EnsemblGRCm38mm10GRCm38
MGSCv371061,143,069 - 61,156,045 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361061,075,678 - 61,088,654 (+)NCBIMGSCv36mm8
Celera1062,781,827 - 62,794,803 (+)NCBICelera
Cytogenetic Map10B4NCBI
cM Map1032.26NCBI
Sar1a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543721,074,930 - 21,093,608 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495543721,075,632 - 21,093,608 (+)NCBIChiLan1.0ChiLan1.0
SAR1A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2882,303,178 - 82,323,179 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11082,310,724 - 82,328,500 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01066,623,355 - 66,643,354 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11069,151,972 - 69,171,929 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1069,151,980 - 69,171,909 (-)Ensemblpanpan1.1panPan2
Sar1a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721359,929,762 - 59,947,221 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365218,422,446 - 8,441,333 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365218,422,511 - 8,439,945 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SAR1A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1473,090,944 - 73,108,156 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11473,090,936 - 73,108,209 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21479,010,270 - 79,027,975 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SAR1A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1961,134,657 - 61,154,551 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl961,144,503 - 61,154,226 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604821,874,954 - 21,895,321 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Sar1a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247544,314,596 - 4,332,846 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247544,314,596 - 4,332,902 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Sar1a
40 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:664
Count of miRNA genes:281
Interacting mature miRNAs:358
Transcripts:ENSRNOT00000000673
Prediction methods:Microtar, Miranda
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4889610Pancm3Pancreatic morphology QTL 33.750.001pancreas mass (VT:0010144)pancreas wet weight (CMO:0000626)201761783247606836Rat
2303587Bw93Body weight QTL 9313body mass (VT:0001259)body weight (CMO:0000012)202510672254435887Rat
1641915Colcr9Colorectal carcinoma resistance QTL 92.970.0024intestine integrity trait (VT:0010554)benign colorectal tumor number (CMO:0001795)20153065546530655Rat
7411668Foco32Food consumption QTL 3280.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)20136600972Rat
2305926Iddm37Insulin dependent diabetes mellitus QTL 376blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)20152784246527842Rat
2303626Vencon10Ventilatory control QTL 100.001respiration trait (VT:0001943)respiration rate (CMO:0000289)201919072154435887Rat
1598869Memor6Memory QTL 63.1exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)202924438854435887Rat
7411652Foco24Food consumption QTL 240.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)201175751554435887Rat
1331747Hrtrt16Heart rate QTL 163.163heart pumping trait (VT:2000009)heart rate (CMO:0000002)202520973454435887Rat
1598816Memor12Memory QTL 122.4exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)20260683647606836Rat
2303578Gluco50Glucose level QTL 502blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)202510672254435887Rat
2317880Alcrsp25Alcohol response QTL 252.3response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)201769755054435887Rat
6893685Bw111Body weight QTL 1112.70.004body mass (VT:0001259)body weight (CMO:0000012)20132578807Rat
9590252Scort12Serum corticosterone level QTL 1220.460.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)20136600972Rat
9590092Insglur9Insulin/glucose ratio QTL 918.380.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)201175751554435887Rat
2300188Bmd68Bone mineral density QTL 686.40.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)202510672254435887Rat

Markers in Region
RH127573  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22029,635,479 - 29,635,695 (+)MAPPERmRatBN7.2
Rnor_6.02031,310,221 - 31,310,436NCBIRnor6.0
Rnor_5.02033,107,696 - 33,107,911UniSTSRnor5.0
RGSC_v3.42029,060,169 - 29,060,384UniSTSRGSC3.4
Celera2031,062,961 - 31,063,176UniSTS
Cytogenetic Map20q11UniSTS
SAR1A  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22029,628,296 - 29,628,783 (+)MAPPERmRatBN7.2
Rnor_6.02031,303,038 - 31,303,524NCBIRnor6.0
Rnor_5.02033,100,513 - 33,100,999UniSTSRnor5.0
RGSC_v3.42029,052,986 - 29,053,472UniSTSRGSC3.4
Celera2031,055,778 - 31,056,264UniSTS
Cytogenetic Map20q11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
3 11 43 82 57 60 41 19 41 160 73 74 35 41 19

Sequence


Ensembl Acc Id: ENSRNOT00000000673   ⟹   ENSRNOP00000000673
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2029,623,553 - 29,635,935 (+)Ensembl
Rnor_6.0 Ensembl2031,298,269 - 31,310,674 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000000674   ⟹   ENSRNOP00000000674
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl2031,265,519 - 31,292,448 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000079584   ⟹   ENSRNOP00000069053
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl2031,265,483 - 31,303,028 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000099561   ⟹   ENSRNOP00000097301
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2029,623,564 - 29,635,926 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000119581   ⟹   ENSRNOP00000081890
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2029,623,618 - 29,635,806 (+)Ensembl
RefSeq Acc Id: NM_001007739   ⟹   NP_001007740
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82030,166,310 - 30,178,718 (+)NCBI
mRatBN7.22029,623,529 - 29,635,935 (+)NCBI
Rnor_6.02031,298,269 - 31,310,676 (+)NCBI
Rnor_5.02033,095,744 - 33,108,151 (+)NCBI
RGSC_v3.42029,048,217 - 29,060,624 (+)RGD
Celera2031,051,009 - 31,063,416 (+)RGD
Sequence:
RefSeq Acc Id: XM_006256450   ⟹   XP_006256512
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82030,166,315 - 30,178,718 (+)NCBI
mRatBN7.22029,623,534 - 29,635,935 (+)NCBI
Rnor_6.02031,298,305 - 31,310,676 (+)NCBI
Rnor_5.02033,095,744 - 33,108,151 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006256451   ⟹   XP_006256513
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82030,166,329 - 30,178,718 (+)NCBI
mRatBN7.22029,623,579 - 29,635,935 (+)NCBI
Rnor_6.02031,298,317 - 31,310,676 (+)NCBI
Rnor_5.02033,095,744 - 33,108,151 (+)NCBI
Sequence:
RefSeq Acc Id: NP_001007740   ⟸   NM_001007739
- UniProtKB: Q6AY18 (UniProtKB/TrEMBL),   A0A8I5ZTV6 (UniProtKB/TrEMBL),   F7EPI0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006256513   ⟸   XM_006256451
- Peptide Label: isoform X1
- UniProtKB: Q6AY18 (UniProtKB/TrEMBL),   A0A8I5ZTV6 (UniProtKB/TrEMBL),   F7EPI0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006256512   ⟸   XM_006256450
- Peptide Label: isoform X1
- UniProtKB: Q6AY18 (UniProtKB/TrEMBL),   A0A8I5ZTV6 (UniProtKB/TrEMBL),   F7EPI0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000069053   ⟸   ENSRNOT00000079584
Ensembl Acc Id: ENSRNOP00000000673   ⟸   ENSRNOT00000000673
Ensembl Acc Id: ENSRNOP00000000674   ⟸   ENSRNOT00000000674
Ensembl Acc Id: ENSRNOP00000097301   ⟸   ENSRNOT00000099561
Ensembl Acc Id: ENSRNOP00000081890   ⟸   ENSRNOT00000119581

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13701606
Promoter ID:EPDNEW_R12130
Type:initiation region
Name:Ppa1_2
Description:pyrophosphatase 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R12129  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.02031,298,325 - 31,298,385EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1359540 AgrOrtholog
BioCyc Gene G2FUF-3716 BioCyc
Ensembl Genes ENSRNOG00000000557 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000000673.5 UniProtKB/TrEMBL
  ENSRNOT00000099561.1 UniProtKB/TrEMBL
  ENSRNOT00000119581.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7132455 IMAGE-MGC_LOAD
InterPro ARF/SAR UniProtKB/TrEMBL
  GTPase_SAR1 UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
  Small_GTP_bd UniProtKB/TrEMBL
KEGG Report rno:361842 UniProtKB/TrEMBL
MGC_CLONE MGC:94305 IMAGE-MGC_LOAD
NCBI Gene 361842 ENTREZGENE
PANTHER PTHR45684 UniProtKB/TrEMBL
Pfam Arf UniProtKB/TrEMBL
PhenoGen Sar1a PhenoGen
PRINTS SAR1GTPBP UniProtKB/TrEMBL
PROSITE ARF UniProtKB/TrEMBL
  SAR1 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000000557 RatGTEx
SMART ARF UniProtKB/TrEMBL
  SAR UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt A0A8I5ZTV6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GMG5_RAT UniProtKB/TrEMBL
  A6K406_RAT UniProtKB/TrEMBL
  A6K414_RAT UniProtKB/TrEMBL
  F7EPI0 ENTREZGENE, UniProtKB/TrEMBL
  Q6AY18 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2014-03-13 Sar1a  secretion associated, Ras related GTPase 1A  Sar1a  SAR1 homolog A (S. cerevisiae)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-10-30 Sar1a  SAR1 homolog A (S. cerevisiae)  Sar1a  SAR1 gene homolog A (S. cerevisiae)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-30 Sar1a  SAR1 gene homolog A (S. cerevisiae)  Sara1  SAR1a gene homolog 1  Symbol and Name updated 1299863 APPROVED
2005-07-29 Sara1  SAR1a gene homolog 1      Symbol and Name status set to provisional 70820 PROVISIONAL