Pancm3 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Pancm3 (Pancreatic morphology QTL 3) Rattus norvegicus

Symbol: Pancm3
Name: Pancreatic morphology QTL 3
RGD ID: 4889610
Trait: pancreas mass   (VT:0010144)    
Measurement Type: pancreas wet weight   (CMO:0000626)    
LOD Score: 3.75
P Value: 0.001
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22017,617,832 - 47,606,836RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.02018,872,150 - 49,108,956RGD_MAPPER_PIPELINERnor6.0
Rnor_5.02021,025,611 - 50,747,478RGDRnor5.0
RGSC_v3.42018,411,845 - 48,055,886RGDRGSC3.4
Cross Type: Not Available
Strains Crossed: CDR/Ygl CDS/Ygl 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Measurement Method

Vertebrate Trait

Rat Strain
CDR/Ygl  (IEA)
CDS/Ygl  (IEA)

References

References - curated
# Reference Title Reference Citation
1. GENDER-SPECIFIC GENETIC DISSECTION OF DIABETES IN A RODENT MODEL IDENTIFIES ICA1 AND NDUFA4 AS MAJOR CANDIDATE GENES. Barkalifa R, etal., Physiol Genomics. 2010 Jun 8.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3591Ros1ROS proto-oncogene 1 , receptor tyrosine kinase203143263631583998Rat
619760Cdh23cadherin-related 23202824064328622490Rat
2298Cd24CD24 molecule204707435347079662Rat
2319Cdk1cyclin-dependent kinase 1201926622619281417Rat
619894Plnphospholamban203262953732639559Rat
3335PkibcAMP-dependent protein kinase inhibitor beta203696517237062190Rat
2796Hk1hexokinase 1203023048830332099Rat
70942Cd164CD164 molecule204502405145035628Rat
69312Fabp7fatty acid binding protein 7203712319337126725Rat
2641FynFYN proto-oncogene, Src family tyrosine kinase204276773342960903Rat
2104Amd1adenosylmethionine decarboxylase 1204369578343711476Rat
3028Marcksmyristoylated alanine rich protein kinase C substrate204068531540691012Rat
68395Hsf2heat shock transcription factor 2203681986436847490Rat
621570Npffr1neuropeptide FF receptor 1202953979529573951Rat
708458Jmjd1cjumonji domain containing 1C202133214721494220Rat
631350Neurog3neurogenin 3203007978030081262Rat
70939Gpr6G protein-coupled receptor 6204448985344492624Rat
631438Naglt1Na+ dependent glucose transporter 1204341155043423873Rat
727843Serinc1serine incorporator 1203685006236868999Rat
628599Sgpl1sphingosine-1-phosphate lyase 1202904779329094209Rat
619753Smpd2sphingomyelin phosphodiesterase 2204498622944989343Rat
619976Hdac2histone deacetylase 2204054824440571609Rat
3812Tacr2tachykinin receptor 2203020890730223446Rat
621423Frkfyn-related Src family tyrosine kinase203826541638371038Rat
620157Ank3ankyrin 3201860226719225831Rat
61937Nrbf2nuclear receptor binding factor 2202130855521326881Rat
621608Egr2early growth response 2202105127021056322Rat
621263Pbld1phenazine biosynthesis-like protein domain containing 1202555127425566543Rat
735033Micu1mitochondrial calcium uptake 1202766868127816322Rat
3423Psapprosaposin202821422928240501Rat
621731Ddit4DNA-damage-inducible transcript 4202789198927894088Rat
621756Unc5bunc-5 netrin receptor B202869772628764474Rat
619969Srgnserglycin203044281030479549Rat
1304834Rtkn2rhotekin 2202053662820609951Rat
1304835Calhm6calcium homeostasis modulator family member 6202609559126097336Rat
1304866Lrrtm3leucine rich repeat transmembrane neuronal 3202451562724689669Rat
3263Pcbd1pterin-4 alpha-carbinolamine dehydratase 1202903754529044322Rat
735077Gprc6aG protein-coupled receptor, class C, group 6, member A203092210630943412Rat
727811Slc29a3solute carrier family 29 member 3202864526528685388Rat
1304957Atoh7atonal bHLH transcription factor 7202553082625531275Rat
69197Slc16a10solute carrier family 16 member 10204345481943567839Rat
620355Chst3carbohydrate sulfotransferase 3202811438628152046Rat
708463Prf1perforin 1202924620229251712Rat
631337Rwdd1RWD domain containing 1202594972325967147Rat
1305732Gcc2GRIP and coiled-coil domain containing 2202624739426293613Rat
1307229Rsph4aradial spoke head component 4A203076440930780574Rat
1307517Sesn1sestrin 1204529487645387698Rat
1305214Nt5dc15'-nucleotidase domain containing 1203810567738208613Rat
1307459Bicc1BicC family RNA binding protein 1201744963917686775Rat
1305131Twf2-ps1twinfilin, actin-binding protein, homolog 2 (Drosophila), pseudogene 1203641197736413147Rat
1305587Fam241bfamily with sequence similarity 241 member B203005231530055247Rat
1305435Cdk19cyclin-dependent kinase 19204377040943910629Rat
1308542Sirt1sirtuin 1202530722525329273Rat
1306379Hs3st5heparan sulfate-glucosamine 3-sulfotransferase 5204010687640417661Rat
1306048Tube1tubulin, epsilon 1204255239042570324Rat
1307306Ddx21DExD-box helicase 21203053431930554513Rat
1305565Supv3l1Suv3 like RNA helicase203037854230399076Rat
1306739Cabcoco1ciliary associated calcium binding coiled-coil 1202005849220167973Rat
1306162Taf9-psTAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor pseudogene202557648825577402Rat
1307967Phyhiplphytanoyl-CoA 2-hydroxylase interacting protein-like201802474418065822Rat
1305079Dsedermatan sulfate epimerase202611819426196889Rat
1305994Nodalnodal growth differentiation factor202936843629376837Rat
1308568Spock2SPARC/osteonectin, cwcv and kazal like domains proteoglycan 2202803733428064272Rat
1304770Mfsd4b2major facilitator superfamily domain containing 4B2204334460143353061Rat
1307354Tysnd1trypsin like peroxisomal matrix peptidase 1202963794229646492Rat
1307726Tspyl1TSPY-like 1203808200338084562Rat
1307063Cdc40cell division cycle 40204427308044325605Rat
1308510Mypnmyopalladin202542989825522443Rat
1310019Hnrnph3heterogeneous nuclear ribonucleoprotein H3202561640025625814Rat
1307491Rfx6regulatory factor X, 6203101978431073266Rat
1309512Gopcgolgi associated PDZ and coiled-coil motif containing203172761731776904Rat
1304964Aifm2apoptosis inducing factor, mitochondria associated 2202965428329679239Rat
1307211Dcbld1discoidin, CUB and LCCL domain containing 1203161855631711697Rat
1307434Gtf3c6general transcription factor 3C subunit 6204365640043668382Rat
2371Col10a1collagen type X alpha 1 chain203818310338189488Rat
1306653Tspyl4TSPY-like 4203809875638100752Rat
735082Oit3oncoprotein induced transcript 3202739011327410692Rat
1307755Nepnnephrocan203178660731799458Rat
1308629Crybg1crystallin beta-gamma domain containing 1204742503047496918Rat
1309273Tmem26transmembrane protein 26201982076819872561Rat
1560557Mcm9minichromosome maintenance 9 homologous recombination repair factor203281821932929577Rat
1559810Cd46l1CD46 molecule like 1203399640433997405Rat
1359372Pdss2decaprenyl diphosphate synthase subunit 2204670963146938704Rat
621000P4ha1prolyl 4-hydroxylase subunit alpha 1202730204627352098Rat
1310824Eif4ebp2eukaryotic translation initiation factor 4E binding protein 2202937944429400110Rat
1311294Fam184afamily with sequence similarity 184, member A203293442433056626Rat
1306871Rhobtb1Rho-related BTB domain containing 1201932714219456121Rat
1311358Cep57l1centrosomal protein 57-like 1204523803945294575Rat
1310993Tet1tet methylcytosine dioxygenase 1202576104225840926Rat
1310405Calhm5calcium homeostasis modulator family member 5202606627026072348Rat
1308233Ado2-aminoethanethiol dioxygenase202104481521045983Rat
1560401Reep3receptor accessory protein 3202149386821578698Rat
1310891Man1a1mannosidase, alpha, class 1A, member 1203320250933385747Rat
1310971Herc4HECT and RLD domain containing E3 ubiquitin protein ligase 4202532997225404657Rat
1306906Rpf2ribosome production factor 2 homolog204363000343651477Rat
1310622Stox1storkhead box 1203059828430666371Rat
1310898Scml4Scm polycomb group protein like 4204634735046441246Rat
1309386Mical1microtubule associated monooxygenase, calponin and LIM domain containing 1204497413744986089Rat
1308899Adamts14ADAM metallopeptidase with thrombospondin type 1 motif, 14202914302929219846Rat
1305933Pald1phosphatase domain containing, paladin 1202926981429334850Rat
1307879Nus1NUS1 dehydrodolichyl diphosphate synthase subunit203181181731838562Rat
1307087Rev3lREV3 like, DNA directed polymerase zeta catalytic subunit204313184143290102Rat
1311311Slc25a16solute carrier family 25 member 16202569147425717558Rat
1304984Sec63SEC63 homolog, protein translocation regulator204624510146314055Rat
1310149Fam13cfamily with sequence similarity 13, member C201806562518187792Rat
1308699Msl3l2male-specific lethal 3-like 2203546887735477025Rat
1306951Zbtb24zinc finger and BTB domain containing 24204494330244965329Rat
1310934Ddx50DExD-box helicase 50203056162330591324Rat
1311375Fig4FIG4 phosphoinositide 5-phosphatase204460060344724047Rat
1306791Dna2DNA replication helicase/nuclease 2202566165225690598Rat
1307672Zup1zinc finger containing ubiquitin peptidase 1203078522630815377Rat
1309196Foxo3forkhead box O3204566970845764606Rat
1305065Snrpd2lsmall nuclear ribonucleoprotein D2-like202725331927253843Rat
1311735Arid5bAT-rich interaction domain 5B202030773120490746Rat
1359677Dnajb12DnaJ heat shock protein family (Hsp40) member B12202782821627846428Rat
1559879Ak9adenylate kinase 9204472449444941135Rat
1561371Macroh2a2macroH2A.2 histone202967819429727867Rat
1560479Sobpsine oculis binding protein homolog204648226546661452Rat
1560047Ranbp2RAN binding protein 2202644215626493481Rat
1561777Mfsd4b2l2major facilitator superfamily domain containing 4B2 like 2204336915143394397Rat
1561954Wasf1WASP family member 1204432581544372999Rat
1561501Afg1lAFG1 like ATPase204579834445967997Rat
1563384Rtn4ip1reticulon 4 interacting protein 1204738225147422747Rat
1564320Rpl5-ps4ribosomal protein L5, pseudogene 4201999909020013525Rat
1359490Qrsl1glutaminyl-tRNA amidotransferase subunit QRSL1204735720647382160Rat
1560975Tuba1a-ps2tubulin, alpha 1A, pseudogene 2204562125145622830Rat
1564849Rpl37a-ps5ribosomal protein L37A, pseudogene 5204695830646958670Rat
1310495Mfsd4b2l1major facilitator superfamily domain containing 4B2 like 1204343685743450064Rat
1560732Lims1LIM zinc finger domain containing 1202630983326418511Rat
1561324Kpna5karyopherin subunit alpha 5203082292530888080Rat
1359254Vps26aVPS26 retromer complex component A203040432030434266Rat
1359255Ascc1activating signal cointegrator 1 complex subunit 1202794105328031272Rat
1564120Ccn6cellular communication network factor 6204256930942585126Rat
1559781Dnal4-ps1dynein, axonemal, light chain 4, pseudogene 1202172317721724458Rat
1359307Septin10septin 10202710176427194997Rat
1564857Mettl24methyltransferase like 24204414212644264651Rat
1311941Asf1aanti-silencing function 1A histone chaperone203289396232908808Rat
1359540Sar1asecretion associated, Ras related GTPase 1A202962352929635935Rat
1560062Lama4laminin subunit alpha 4204239226842533347Rat
1564702Dynlt2b-ps1dynein light chain Tctex-type 2B, pseudogene 1201921604819216620Rat
1311903Vgll2vestigial-like family member 2203140952931415408Rat
1559576Slc35f1solute carrier family 35, member F1203203035032418762Rat
2690Gja1gap junction protein, alpha 1203575600735768481Rat
1566140Lrrc20leucine rich repeat containing 20202942285829528372Rat
1559971Mfsd4b1major facilitator superfamily domain containing 4B1204332441943333869Rat
1586477Nsrp1-ps1nuclear speckle splicing regulatory protein 1, pseudogene 1204729277247294962Rat
1585090Rpsa-ps10ribosomal protein SA, pseudogene 10202182249421824983Rat
1561288Phb1-ps19prohibitin 1, pseudogene 19203620463736229806Rat
1587433Ccdc6coiled-coil domain containing 6201843217718528186Rat
1561714Edarectodysplasin-A receptor202658783626666543Rat
1564976Ostm1osteoclastogenesis associated transmembrane protein 1204607165746187049Rat
1566050Ccdc138coiled-coil domain containing 138202649362426572367Rat
1562230Ctnna3catenin alpha 3202361446925200026Rat
1560358Ccar1cell division cycle and apoptosis regulator 1203068591630728531Rat
1562413Armc2armadillo repeat containing 2204539585945501808Rat
1359277Smpdl3asphingomyelin phosphodiesterase, acid-like 3A203713259237155567Rat
1566244Tatdn1-ps1TatD DNase domain containing 1, pseudogene 1203445576234456682Rat
1561665Tbatathymus, brain and testes associated202911805529135124Rat
1565986Zfp365zinc finger protein 365202066624020689734Rat
1589771Mcumitochondrial calcium uniporter202741752927580110Rat
1589772Sh3rf3SH3 domain containing ring finger 3202676527827099261Rat
1589773Ppa1inorganic pyrophosphatase 1202959073329617711Rat
1592098Hspd1-ps6heat shock protein family D (Hsp60) member 1, pseudogene 6203136731231370199Rat
1593126Kifbpkinesin family binding protein203051289930532504Rat
15899889030612E09RiklRIKEN cDNA 9030612E09 gene like204666153146663481Rat
1592188Rufy2RUN and FYVE domain containing 2202562695825658157Rat
1586296Rpl29-ps2ribosomal protein L29, pseudogene 2201924812919248708Rat
1587209Gpbp1l3GC-rich promoter binding protein 1-like 3204375551043756937Rat
1587645Fxc1-ps1fractured callus expressed transcript 1, pseudogene 1204704832747049191Rat
1590918Gapdh-ps96Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 96203592138735922419Rat
1566373Rpl36al-ps5ribosomal protein L36A, pseudogene 5202203530022035620Rat
1588304Tspan15tetraspanin 15203013052830174912Rat
1588274Ciao2a-ps1cytosolic iron-sulfur assembly component 2A, pseudogene 1203018830130188739Rat
1590938VsirV-set immunoregulatory receptor202828158228307262Rat
1588484Pla2g12bphospholipase A2, group XIIB202736919627389517Rat
1596570Bend3BEN domain containing 3204698024647017059Rat
1597212Btf3-ps9basic transcription factor 3, pseudogene 9203116134331162708Rat
1595700Gnl3-ps1G protein nucleolar 3, pseudogene 1204623392746235886Rat
1595701Calhm4calcium homeostasis modulator family member 4202599016425993173Rat
1595702Eef1a1-ps5eukaryotic translation elongation factor 1 alpha 1, pseudogene 5202622143226222988Rat
1595666Sowahcsosondowah ankyrin repeat domain family member C202719519827199664Rat
1595988Prdx1-ps7peroxiredoxin 1, pseudogene 7203222438032239928Rat
1595704Col13a1collagen type XIII alpha 1 chain202978396529924116Rat
1595123DdoD-aspartate oxidase204409082344109962Rat
1592581Ppil6peptidylprolyl isomerase like 6204498950945017833Rat
1595645Fabp5-ps3fatty acid binding protein 5, pseudogene 3202766383827664399Rat
1593240Traf3ip2Traf3 interacting protein 2204301140543054654Rat
1595151Snx3sorting nexin 3204599244646025361Rat
1595162Nr2e1nuclear receptor subfamily 2, group E, member 1204605013446071257Rat
1595984Ndufb4-ps9NADH:ubiquinone oxidoreductase subunit B4, pseudogene 9203274390032744361Rat
1596742Hdac1-ps5Histone deacetylase 1, pseudogene 5204148776841489655Rat
1595968Rab1a-ps5RAB1A, member RAS oncogene family, pseudogene 5203468878734689383Rat
1592810Slc22a16solute carrier family 22 member 16204397280844068447Rat
1589355Tuba1b-ps10tubulin, alpha 1B, pseudogene 10203407129034072085Rat
1591898Dnajc12DnaJ heat shock protein family (Hsp40) member C12202524674425267508Rat
1595943Ldha-ps19lactate dehydrogenase A, pseudogene 19203578551135786667Rat
1595809Ppid-ps15peptidylprolyl isomerase D, pseudogene 15203985367939854858Rat
1595810Eef1b2-ps2eukaryotic translation elongation factor 1 beta 2, pseudogene 2203100616831013069Rat
1595811Csrp2-ps1cysteine and glycine-rich protein 2, pseudogene 1202941091029412904Rat
1595812Rps7-ps18ribosomal protein S7, pseudogene 18202882380228827260Rat
1595813Plin3-ps1perilipin 3, pseudogene 1202213109522132852Rat
1597785Mtres1mitochondrial transcription rescue factor 1204702234347038888Rat
1596295Slc16a9solute carrier family 16, member 9201833586218377125Rat
2300149Fam229bfamily with sequence similarity 229, member B204253885342552355Rat
2319745Cep85lcentrosomal protein 85-like203256841732739449Rat
2318506Trappc3ltrafficking protein particle complex subunit 3L202599283526084938Rat
2319794Rplp0-ps2ribosomal protein lateral stalk subunit P0, pseudogene 2202313632723138545Rat
2318104St13-ps10ST13, Hsp70 interacting protein, pseudogene 10201920288219204368Rat
2320089LOC100361476vasculin-like protein 1-like204375480743757289Rat
2318275Rps8-ps3ribosomal protein S8, pseudogene 3203974441039745949Rat
2320899Rpl13a-ps2ribosomal protein L13A, pseudogene 2204051332440513977Rat
2321665Pbld2phenazine biosynthesis-like protein domain containing 2202556824225603092Rat
2320942C20h10orf105similar to human chromosome 10 open reading frame 105202833309428339341Rat
2321830Hkdc1hexokinase domain containing 1203033532230373792Rat
2323245Ppig-ps2peptidylprolyl isomerase G, pseudogene 2204329303643295575Rat
2321124Anapc16anaphase promoting complex subunit 16202792733427941644Rat
2323304Rfpl4bret finger protein-like 4B204225726042258155Rat
2323599Tbc1d32TBC1 domain family, member 32203535986535590992Rat
2323619Setdb2-ps1SET domain bifurcated histone lysine methyltransferase 2, pseudogene 1204061202740613238Rat
2323787Rpl29-ps22ribosomal protein L29, pseudogene 22202553130625537882Rat
2323967LOC100362811hypothetical LOC100362811202232726322329004Rat
2324829Rpl37a-ps15ribosomal protein L37A, pseudogene 15202816912228170246Rat
6490783Mrlnmyoregulin201840678918423805Rat
6495429LOC100911055transforming growth factor beta regulator 1-like203150570131507161Rat
6495981LOC100910945uncharacterized LOC100910945202576451225782723Rat
6500332Rps27a-ps25ribosomal protein S27a, pseudogene 25202228573922286300Rat
6501150Hspa8-ps30heat shock protein family A (Hsp70) member 8, pseudogene 30202504651925048409Rat
7514220Ccdc162coiled-coil domain containing 162204504489145237905Rat
7507083LOC102555657uncharacterized LOC102555657204565557045662920Rat
7510380LOC102552513uncharacterized LOC102552513202250304422513034Rat
7511826LOC102555751uncharacterized LOC102555751204088737440907114Rat
7535666LOC102552132uncharacterized LOC102552132202192258521934467Rat
7519461LOC102555815uncharacterized LOC102555815201976219619784101Rat
7631568LOC102554932uncharacterized LOC102554932201931572119323063Rat
7646506LOC102553246uncharacterized LOC102553246201839942318406649Rat
7576062LOC102546320uncharacterized LOC102546320201993089919939872Rat
7628198LOC102550965uncharacterized LOC102550965202084477620875747Rat
7617643LOC102555143uncharacterized LOC102555143203116617331215032Rat
7573196Eno1-ps19enolase 1, pseudogene 19201990361419909063Rat
7560376Kars1-ps1lysyl-tRNA synthetase 1, pseudogene 1203077502630777480Rat
7560662LOC102554153uncharacterized LOC102554153201885968418866463Rat
7579079LOC102553944uncharacterized LOC102553944201870577418708244Rat
7602974LOC102549211uncharacterized LOC102549211201829303418294845Rat
7566960LOC102555452uncharacterized LOC102555452204725456947266213Rat
7736416LOC102550601uncharacterized LOC102550601202050816320515121Rat
7692592LOC102550328uncharacterized LOC102550328204556798745580165Rat
7692665LOC102552717uncharacterized LOC102552717202335781123396240Rat
7752734LOC102550842uncharacterized LOC102550842204632430846325329Rat
7707478LOC102551701uncharacterized LOC102551701202165179221665185Rat
7689460LOC102546554uncharacterized LOC102546554202023462920240296Rat
7732121LOC102550544M-phase phosphoprotein 6-like204248850342489485Rat
7715446LOC102555396uncharacterized LOC102555396204723800947273603Rat
7734252LOC102551730uncharacterized LOC102551730204681242246855647Rat
7715735Utp15-ps1UTP15, small subunit processome component204474674944750062Rat
7743730LOC102555785uncharacterized LOC102555785202900803629012938Rat
7745235LOC102546480uncharacterized LOC102546480202023317320234711Rat
7674886LOC102548329uncharacterized LOC102548329201772173517737688Rat
7722068LOC102555625uncharacterized LOC102555625202888353128907359Rat
7679422LOC102546397uncharacterized LOC102546397201993985219965580Rat
7709358LOC102552402uncharacterized LOC102552402203598070436021996Rat
7680830LOC102550301uncharacterized LOC102550301204185382441870096Rat
7730177LOC102552716uncharacterized LOC102552716201830081518321944Rat
9184457LOC103694427heat shock cognate 71 kDa protein pseudogene203085416230856235Rat
9199911Cox5bl1cytochrome c oxidase subunit 5B like 1202796023027962862Rat
9165343Eloc-ps4elongin C, pseduogene 4202575415525754562Rat
9214605LOC103690421uncharacterized LOC103690421204555650145567606Rat
9266578LOC103694462inactive serine/threonine-protein kinase VRK3 pseudogene203573191735732340Rat
9272284LOC103694425U1 small nuclear ribonucleoprotein C pseudogene202547838825479830Rat
9315662Rpl39l4ribosomal protein L39 like 4202896669428966887Rat
9466215LOC103694421uncharacterized LOC103694421203088828430891307Rat
9432030LOC103694446uncharacterized LOC103694446204550162845504756Rat
9440676LOC103694417uncharacterized LOC103694417202668513126687517Rat
11356502LOC108349024uncharacterized LOC108349024202108663821088750Rat
11454336Tmem167b-ps1transmembrane protein 167B, pseudogene 1202505138025051934Rat
11464501LOC108349077uncharacterized LOC108349077203802061238037305Rat
11367462LOC108353252uncharacterized LOC108353252203912757939128591Rat
11369035Rpl15-ps15ribosomal protein L15, pseudogene 15203586102135862082Rat
11369221Trnas-uga4transfer RNA serine (anticodon UGA) 4202520055225200633Rat
11453714LOC108349085uncharacterized LOC108349085204362246043633675Rat
11383612LOC108353232uncharacterized LOC108353232203045773930470936Rat
11421040LOC108349075uncharacterized LOC108349075203681248236819862Rat
11425208LOC108349059uncharacterized LOC108349059202097891021031807Rat
11425978LOC108353239proline-rich protein HaeIII subfamily 1-like202971478929732883Rat
11427217LOC108349026uncharacterized LOC108349026203904342639060401Rat
11390416LOC108349019SUMO-conjugating enzyme UBC9 pseudogene203950542939513411Rat
11401889LOC108349057uncharacterized LOC108349057202050215420509680Rat
11381173LOC108349058uncharacterized LOC108349058202088743120910591Rat
11381497LOC108349082claudin-7 pseudogene204277150542783040Rat
11520367LOC10834905440S ribosomal protein S26-like201846880018469148Rat
11506631LOC108349068uncharacterized LOC108349068203066505330665912Rat
11509718Zfp41-ps1zinc finger protein 41, pseudogene 1203090598430907374Rat
11497081LOC108349074uncharacterized LOC108349074203583876635887270Rat
11497658LOC108349079uncharacterized LOC108349079203850680138552694Rat
11514788LOC108349084uncharacterized LOC108349084204301048443012747Rat
11491188LOC108349081uncharacterized LOC108349081204261668642683998Rat
41379544LOC120098955uncharacterized LOC120098955204430558444310865Rat
41276577LOC120098947uncharacterized LOC120098947202108899021095642Rat
41276760LOC120099075U2 spliceosomal RNA203041347930413668Rat
41323209LOC120098996uncharacterized LOC120098996204069315440704593Rat
41277635LOC120098940uncharacterized LOC120098940204240983442416834Rat
41089220Duxl3double homeobox like 3203783126137849815Rat
41114181LOC120099020small nucleolar RNA SNORA17204212931742129446Rat
41171069LOC120098902uncharacterized LOC120098902201818185518190318Rat
41384760LOC120098880uncharacterized LOC120098880204071545440742025Rat
41142093LOC120099068small nucleolar RNA SNORA24201947240419472532Rat
41142560LOC120098878uncharacterized LOC120098878203225566632262192Rat
41142806LOC120099067small nucleolar RNA SNORA4203874338138743516Rat
41207248Trnas-aga16transfer RNA serine (anticodon AGA) 16202910373229103815Rat
41252687LOC120098953uncharacterized LOC120098953203072861530730202Rat
41327353LOC120099042U6 spliceosomal RNA203066729430667400Rat
41360633LOC120099026small nucleolar RNA SNORA17203897368238973796Rat
41092752Tmem258-ps3transmembrane protein 258, pseudogene 3204375248743754095Rat
41116898LOC120098842uncharacterized LOC120098842202162502621634598Rat
41119808LOC120099037small nucleolar RNA U3204366869343668906Rat
41149311LOC120098946uncharacterized LOC120098946202093799220954806Rat
41187369Duxl1double homeobox like 1203735038237351203Rat
41121790LOC120098819uncharacterized LOC120098819204424004944259158Rat
41150740LOC120098883uncharacterized LOC120098883201976272019766571Rat
41178998LOC120098941uncharacterized LOC120098941204252790542538809Rat
41212620LOC120099078small nucleolar RNA SNORA17204353217843532308Rat
41213522LOC120098839uncharacterized LOC120098839201968833419709070Rat
41393454LOC120099027small nucleolar RNA SNORA17203468475734684858Rat
41192126Rpl27-ps8ribosomal protein L27, pseudogene 8202947225429472684Rat
41100321LOC120099030small nucleolar RNA SNORD65201874076418740835Rat
41100586LOC120099040U6 spliceosomal RNA204468300544683111Rat
41268140LOC120099047U6 spliceosomal RNA202135492621355027Rat
41345323LOC120098865uncharacterized LOC120098865204103986141068149Rat
41195318LOC120098867uncharacterized LOC120098867201824753918289067Rat
41268996Vps36-ps1vacuolar protein sorting 36, pseudogene 1203074147730763595Rat
41269162Snrpc-ps2small nuclear ribonucleoprotein polypeptide C, pseudogene 2204100608241008256Rat
41370727LOC120099016small nucleolar RNA SNORA17202764968927649816Rat
41160361Trnaa-agc57transfer RNA alanine (anticodon AGC) 57202028412420284204Rat
41195948LOC120098936uncharacterized LOC120098936201935955319369791Rat
41400166LOC120098927synaptic defective enhancer 1-like203029924930310387Rat
41070913LOC120099035U6atac minor spliceosomal RNA204314812643148232Rat
41128795LOC120099028small nucleolar RNA SNORA26203299299332993113Rat
41161182LOC120099036U2 spliceosomal RNA202319717723197297Rat
41106824LOC120098891uncharacterized LOC120098891204722170847231313Rat
41231372LOC120098900uncharacterized LOC120098900202300695823009573Rat
41272712LOC120098843uncharacterized LOC120098843202161931021623027Rat
41295406LOC120098942uncharacterized LOC120098942204493753644943038Rat
41402703LOC120098848uncharacterized LOC120098848202785633827859219Rat
41083251Ube2n-ps7ubiquitin-conjugating enzyme E2N, pseudogene 7203538987935390578Rat
41164318LOC120099055U7 small nuclear RNA202731980827319870Rat
41199725LOC120098816uncharacterized LOC120098816204369119343692218Rat
41231901LOC120098810uncharacterized LOC120098810202057758520580717Rat
41275321Timm21-ps1translocase of inner mitochondrial membrane 21, pseudogene 1204172839641734758Rat
41275458LOC120098964uncharacterized LOC120098964203305818033064701Rat
41352887Snord98small nucleolar RNA, C/D box 98203070458430704648Rat
41404381LOC120098837uncharacterized LOC120098837201833372018349475Rat
41109825Ube2v2-ps1ubiquitin conjugating enzyme E2 V2, pseudogene 1202512470525125327Rat
41165970LOC120098881uncharacterized LOC120098881204508564845088270Rat
40952207Snora69small nucleolar RNA, H/ACA box 69204361046543610598Rat
40976251LOC120099080small nucleolar RNA SNORA17202209705122097182Rat
40978765Pin4-ps1peptidylprolyl cis/trans isomerase, NIMA-interacting 4, pseudogene 1203002362030023862Rat
41000584Trnap-agg35transfer RNA proline (anticodon AGG) 35204092288640922967Rat
40931338LOC120098903uncharacterized LOC120098903201793554617987049Rat
40982407LOC120098858uncharacterized LOC120098858201955362419555697Rat
40933646LOC120098872uncharacterized LOC120098872204308087543084280Rat
40985922Eif3g-ps1eukaryotic translation initiation factor 3, subunit G, pseudogene 1202489374724894810Rat
41007037LOC120098840uncharacterized LOC120098840201966475119701525Rat
41007625LOC120099018small nucleolar RNA SNORA17203122816031228292Rat
40963057LOC120098912uncharacterized LOC120098912202065018120652793Rat
40938314Trnas-agatransfer RNA serine (anticodon AGA)204562344145623513Rat
40939469LOC120098914uncharacterized LOC120098914202061538120624355Rat
40991786Trnat-agu35transfer RNA threonine (anticodon AGU) 35204044118440441258Rat
40944525LOC120099058small nucleolar RNA SNORA70202571414025714275Rat
40969806LOC120098901uncharacterized LOC120098901201791574918024603Rat
40994842Mrps36-ps1mitochondrial ribosomal protein S36, pseudogene 1202541412725424854Rat
40994920LOC120099015uncharacterized LOC120099015201922491319227113Rat
40996192LOC120098877uncharacterized LOC120098877203203416232051064Rat
41074627LOC120099038small nucleolar RNA U3203778470937784782Rat
41242957LOC120098925uncharacterized LOC120098925203009008230092405Rat
41048958LOC120099043U6 spliceosomal RNA204113029141130397Rat
41049570LOC120098838uncharacterized LOC120098838201962625619673997Rat
41050300LOC120099059small nucleolar RNA SNORD113/SNORD114 family202634681926346887Rat
41077662Dux4-ps6double homeobox 4, pseudogene 6203766443037665255Rat
41255492Mcm9lminichromosome maintenance 9 homologous recombination repair factor like203289414332894801Rat
41055569LOC120099054U6 spliceosomal RNA202575604125756149Rat
41335936LOC120099022small nucleolar RNA SNORA17204462532244625455Rat
41057004LOC120098904uncharacterized LOC120098904201817004918172478Rat
41153320Trnaa-agc46transfer RNA alanine (anticodon AGC) 46202973710229737174Rat
41033244LOC120098933uncharacterized LOC120098933203820868538226207Rat
41299223LOC120098945uncharacterized LOC120098945202080025520809482Rat
41299247Rps29-ps7ribosomal protein S29, pseudogene 7202807790728078086Rat
41299430LOC120099025small nucleolar RNA SNORA17202777451227774598Rat
41033381LOC120098841uncharacterized LOC120098841202160471721607673Rat
41060829LOC120098821uncharacterized LOC120098821202584558625852416Rat
41035048Rps15-ps15ribosomal protein S15, pseudogene 15204634496546346914Rat
41301348LOC120099071small nucleolar RNA SNORA9204365520143655333Rat
41302850Trnaa-agc21transfer RNA alanine (anticodon AGC) 21202526652425266596Rat
41043910LOC120099041U6 spliceosomal RNA204380607843806184Rat
41069236LOC120099052U6 spliceosomal RNA202630168626301786Rat
41308985LOC120098823uncharacterized LOC120098823204333397543341553Rat
41022072LOC120098931uncharacterized LOC120098931203821119438231482Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
11106D20Arb6296203706125337061562Ratregion
35993D20Rat11127203723675537236906Ratregion
35993D20Rat11127203773437637734527Ratregion
37336D20Rat35184201994598119946167Ratregion
37446D20Rat54200204019744540197655Ratregion
37570D20Rat38223204439581444396023Ratregion
37582D20Rat36150202662148526621635Ratregion
35182D20Rat6127202801272528012852Ratregion
35182D20Rat6127202801281628012852Ratregion
35212D20Rat13137202403059724030713Ratregion
35244D20Rat9137203246350232463632Ratregion
35327D20Rat10158203425743634257594Ratregion
35459D20Rat16157204626635246266514Ratregion
36807D4Rat71463203058295930583440Ratregion
36832D20Rat15190201949842819498601Ratregion
37652D20Rat26150202736045427360594Ratregion
37764D20Rat30135202049516320495306Ratregion
37792D20Rat29241204760660947606836Ratregion
37888D20Rat34137202638181426381954Ratregion
36733D20Rat7135202496338924963524Ratregion
36785D20Rat12160203349793633498097Ratregion
34817D20Rat8146202818833928188495Ratregion
35657D20Rat5124201761783217617956Ratregion
38180D20Rat27190202924438829244578Ratregion
38216D20Rat22231203161428431614507Ratregion
38304D20Rat19178204454860844548791Ratregion
40366D20Rat52173203527228935272448Ratregion
38714D20Rat43244203121226731212523Ratregion
38760D20Rat39218204169061141690832Ratregion
38762D20Rat40210203440214934402348Ratregion
39998D20Rat64200202932200229322208Ratregion
40194D20Rat65129203032581530325943Ratregion
40336D20Rat61175201973443119734606Ratregion
38856D20Rat44124203078320130783333Ratregion
38910D20Rat23149202031216420312315Ratregion
38948D20Rat24124204456278244562908Ratregion
39290D20Rat28210202117123821171446Ratregion
39336D20Rat78220202771125127711459Ratregion
39396D20Rat63235202900474329004979Ratregion
39424D20Rat55207204288681942887012Ratregion
41496D20Rat56136204423415344234298Ratregion
42434D20Rat81149204379143943791616Ratregion
41550D20Rat53145203511737135117517Ratregion
41662D20Rat69215202070913720709347Ratregion
41700D20Rat70203203089753030897717Ratregion
41716D20Rat68220202368268723682918Ratregion
43146D20Rat76248203327829533278545Ratregion
43147D20Rat77128203214526432145390Ratregion
45683D20Got23185201820506718205254Ratregion
45684D20Got25197201841716918417366Ratregion
45685D20Got20107201797038917970496Ratregion
45686D20Got27200201866296518663165Ratregion
45688D20Got28135201961815519618290Ratregion
45689D20Got32114203161428331614397Ratregion
45693D20Got31229203219695332197182Ratregion
45694D20Got34240203313768733137927Ratregion
45698D20Got39271204269761142697882Ratregion
45699D20Got38261203878970238789963Ratregion
45700D20Got49149204231455642314705Ratregion
60268D20Got22247202091232620912573Ratregion
60269D20Got24248201969937219699605Ratregion
60271D20Got29232202804881328049045Ratregion
60272D20Got30189202984319629843387Ratregion
60273D20Got33267202993356229933824Ratregion
60274D20Got37296203875325938753555Ratregion
60275D20Got41130204607797446078110Ratregion
60276D20Got43258204718720047187584Ratregion
60276D20Got43258204718732647187584Ratregion
60264D20Got16126202163129521631416Ratregion
60265D20Got17178202095734820957526Ratregion
60266D20Got18222202072333120723548Ratregion
45695D20Got35235203507309335073328Ratregion
625787D20Got5098202074938020749478Ratregion
67239D20Arb9362203507297135073333Ratregion
67748D20Uwm2195201939772519397936Ratregion
1631695D20Got114269203004118530041355Ratregion
1631695D20Got114269203004118530041442Ratregion
1631979D20Got117195202584505325845248Ratregion
1628749D20Got118151202130025721300405Ratregion
1629026D20Wox1996202904588229045978Ratregion
1638852D20Got106205202471824624718453Ratregion
1639135D20Wox8148203030800230308150Ratregion
1639295D20Got109197204454859444548791Ratregion
1641423D20Wox14347201909785319098200Ratregion
1632896D20Got116127202067857120678700Ratregion
1632913D20Got110122202497645224976574Ratregion
1633567D20Got111140202924987329250013Ratregion
1640594D20Got127126202490188124902007Ratregion
1635391D20Mco2198202107814921078349Ratregion
1636386D20Uwm30201785392517854062Ratregion
1636692D20Got123150202641040526410555Ratregion
1637000D20Got113130202627884926278979Ratregion
1637320D20Got108224202854099528541219Ratregion
1637794D20Got115247202482483424825076Ratregion
1633875D20Wox16142203024500130245143Ratregion
1634057D20Got120218202410732424107542Ratregion
1634686D20Got107164202192819221928358Ratregion
7206804RH136178232204057115240571386Ratregion
7193110Col10a10203818754838188135Ratregion
7192557BF391491195203810574638105941Ratregion
7193080AI577391122204257017442570296Ratregion
5036013PMC85623P2233203008064330080876Ratregion
5038690BB307565120204648303646483156Ratregion
5038804RH127342220202157815221578372Ratregion
5036081Ank3174201865863818660295Ratregion
5038930RH127414189201806570918065898Ratregion
5038966RH127435217202967768929677906Ratregion
5039206RH127573216202963547929635695Ratregion
5039120RH127524202203044283530443037Ratregion
5036573AU048473163203075679130756825Ratregion
5036585AU048514260202893257128932831Ratregion
5036597AU048549245203055937730559626Ratregion
5036623AU048630285202076445720764741Ratregion
5036729AU049018252201949836019498612Ratregion
5037115D6S2058139203684663336846772Ratregion
5035546Tspyl434203808283238083266Ratregion
5035729RH70579232204449066444490896Ratregion
5033915RH140601188202532823025328418Ratregion
5025978RH130432187203013056630130753Ratregion
5026046RH130695185203040190930402094Ratregion
5028623RH118335178201893033918930517Ratregion
5028635RH125661250202806395028064200Ratregion
7206232Nodal929202937515029376079Ratregion
5034141RH141521183204259151842591701Ratregion
5026232RH131421184203037868930378873Ratregion
5026238RH131445206204301057043010776Ratregion
5034285RH142064216202738929327389495Ratregion
5026358RH131898180202562553625625716Ratregion
5026432RH132188207202789221127892418Ratregion
5034464BG372291181204426443144264612Ratregion
5029127RH143624127204666171246661839Ratregion
5034526BI274433213204253309842533311Ratregion
5034536AA901167211204068561740685828Ratregion
5026754RH133403182204246750342467685Ratregion
5029285RH144219160202992365829923818Ratregion
5029343RH144435139204397569143975830Ratregion
5034758AA892174102201860240118602503Ratregion
5026800RH133580217201941980219420019Ratregion
5026850RH133771220202864262128642841Ratregion
5035106AFM324zg90202684135426841555Ratregion
5026986RH134291209202594181325942022Ratregion
5029645BF386557162204367385243674014Ratregion
5032391AV064928119202741755627417675Ratregion
5032459RH126560172202583296125833133Ratregion
5027165163489204437275644372845Ratregion
5029749BE102382188203808409538084283Ratregion
5032637RH134743205202792758927927794Ratregion
5034900AI23618891204345502343455114Ratregion
5027401AW551584107202641792126418028Ratregion
5027411AW551867123202941162329411746Ratregion
5032819RH135418188203810051238100700Ratregion
5030199BF389733247203057621130576458Ratregion
5032923RH136979180202803428928034469Ratregion
5024988AU022012222202041934820419572Ratregion
5025072RH126872185202937944429379629Ratregion
5025074AW553563102202533054625330648Ratregion
5033105RH137616203204295326742953470Ratregion
5027779RH94709199203158362731583826Ratregion
5030507BE106860165204501111745011282Ratregion
5033189RH137912169204390994543910114Ratregion
5033243RH138113160202362375023623910Ratregion
5030673BE107575205204156056241560768Ratregion
5033449RH138875155201879861918798774Ratregion
5028085X06746191202105157721051768Ratregion
5028119D10Mit257.1236203551006635510302Ratregion
5030871BE120998165203218512432185289Ratregion
5025618RH129013190201840683018407020Ratregion
5030883BI302095153203055466930554822Ratregion
5025900RH130131198203005243830052636Ratregion
5028511AI173445146201932720719327353Ratregion
5031053AI535549156204523888145239037Ratregion
5051955RH94756112204069053340690645Ratregion
5052007RH94785270203023067830230947Ratregion
5052155RH94871297203818803338188329Ratregion
5053455RH142659125202790094527901070Ratregion
5055839RH144032111202469012524690236Ratregion
5056485RH144406233201982090919821142Ratregion
5053783RH142848146202034203620342182Ratregion
5053839RH142880160202972900229729180Ratregion
5053957RH142948164204239517642395340Ratregion
5056595RH144469286204613597346136259Ratregion
5056701RH144530298204436771644368014Ratregion
5051875RH94708157203143275731432914Ratregion
5052157RH94872100201928124719281347Ratregion
5054517RH143270132201768577517685907Ratregion
5055777RH143996128203284519132845319Ratregion
5058652BE102254157204528784945288006Ratregion
5056043RH144150162203054772230547884Ratregion
5058808BE102483175201912693719127112Ratregion
5058824BF387101217204648770846487925Ratregion
5056989Gpr6282204449092544491207Ratregion
5057039D20Rat57123204527840945278532Ratregion
5057041D20Rat58147204712177747121924Ratregion
5052537AB01003185202172415921724244Ratregion
5059856BE103415169201865207818652247Ratregion
5052867RH142320153204707903847079191Ratregion
5052867RH142320153204707903847079191Ratregion
5059940BF400175168203270576232705930Ratregion
5060018BI285847151204548020145480352Ratregion
5049852RH133719211204735728147357492Ratregion
5049852RH133719211204735728147357492Ratregion
5053129RH142470156203267149832671654Ratregion
5059066BI284998168204375868943758857Ratregion
5050250RH133948216201936776019367975Ratregion
5050318RH133987220201860297918603199Ratregion
5059268BF387907174203324285433243028Ratregion
5059306BG377178215202030620120306416Ratregion
5050486RH134084211202555132425551535Ratregion
5053595RH142739151202153631821536469Ratregion
5049950RH133775180203808436238084542Ratregion
5050840RH134288210204437264444372854Ratregion
5050162RH133897196203685012436850320Ratregion
5052781RH142270155204328962943289784Ratregion
5051176RH134483197202213254322132740Ratregion
5054499RH143259205202505271325052918Ratregion
5051489AI85355686202552232725522413Ratregion
5051741RH94631176204707915047079328Ratregion
5041652RH128980154202053675220536906Ratregion
5044012RH130359186202533016125330347Ratregion
5043296RH129945150204365594243656092Ratregion
5043342RH129971184204736155047362228Ratregion
5044460RH130615217202505375025053967Ratregion
5044460RH130615217202505375025053967Ratregion
5041056RH128638185202904400329044188Ratregion
5041126RH128677152204503544545035597Ratregion
5041280RH128766208202157603021576238Ratregion
5045582RH131260184202952814029528324Ratregion
5041444RH128860180204523814645238326Ratregion
5044118RH130420199202784777627847975Ratregion
5045956RH131476207204503361545033822Ratregion
5044224RH130480180203183647131836652Ratregion
5046334RH131693183202104810721048290Ratregion
5046378RH131718201202830363628303837Ratregion
5044370RH130564205204538739745387602Ratregion
5044422RH130593185204498632244986507Ratregion
5044514RH130647181202973266229732843Ratregion
5044536RH130660187203183819631838383Ratregion
5046450RH131759192202552211125522303Ratregion
5046456RH131763156203837104638371202Ratregion
5046582RH131836193204605020846050401Ratregion
5045948RH131471194203068594930686143Ratregion
5046148RH131586202201871195718712352Ratregion
5046180RH131604187202964369229643879Ratregion
5046208RH131620188204693843746938625Ratregion
5048900RH133171211202864828028648491Ratregion
5048910RH133176203201833799218338903Ratregion
5048962RH133206181203053567830535859Ratregion
5045666RH131309182204296062142960803Ratregion
5045810RH131392211203547670035476911Ratregion
5046670RH131887150202649394726494097Ratregion
5046678RH131892183201843233118432514Ratregion
5046888RH132012195202556829025568485Ratregion
5048136RH132729213202977207729772290Ratregion
5047000RH132077198202713436327134561Ratregion
5047030RH132094211203379829033798501Ratregion
5049702RH133632200203263761132637811Ratregion
5049710RH133637197202649302326493220Ratregion
5047114RH132141191201870799718708188Ratregion
5047224RH132205180204579839945798579Ratregion
5047246RH132217203202104756921047772Ratregion
5041930RH129141210202104874421048954Ratregion
5042098RH129238208204256955142569759Ratregion
5048422RH132894211202015749220157703Ratregion
5048584RH132987196203012877630128972Ratregion
5048590RH132991219203826567038265889Ratregion
5048640RH133020220203179916131799381Ratregion
5048648RH133024217203816335338163570Ratregion
5039984RH128021200202824015828240358Ratregion
5040260RH128181194202869780928698727Ratregion
5042766RH129633187204460060644600793Ratregion
5042830RH129670196202961742129617617Ratregion
5042830RH129670196202961742129619121Ratregion
5039704RH127859193202555208225552275Ratregion
7192139Ank3123201860297218603095Ratregion
5039954RH128004156204332450143324657Ratregion
5039958RH128006207203576809935768306Ratregion
5040726RH128448201202569208225692283Ratregion
5043362RH129982195204391038943910584Ratregion
5043564RH130097170202609564826095818Ratregion
5042726RH129608197204650002846500225Ratregion
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5072824RH137075196202524684525247041Ratregion
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5075046RH138367177201922323619223413Ratregion
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5072472RH136869151202557708125577232Ratregion
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5076142RH139003127202505294325053070Ratregion
5076142RH139003127202505294325053070Ratregion
5076172RH139021213202104538021045657Ratregion
5075254RH138488180203820747938207659Ratregion
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5077922RH140037206204068588540686091Ratregion
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5078760RH140536244203263762432637868Ratregion
5078090RH140138210203040461530404825Ratregion
5078110RH140149193203839568238395875Ratregion
5080184RH141433218203551556435515782Ratregion
5080210RH141448217204090534140905796Ratregion
5078596RH140435131202469312424693255Ratregion
5079316RH140911182203044330030443482Ratregion
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5071008RH134833190202927026229270452Ratregion
5071388RH135053213202964515129645364Ratregion
5070770RH134694189204631366546313854Ratregion
5072856RH137093162204305446343054625Ratregion
5071712RH135241208203576809935768307Ratregion
5071750RH135263209204631956546319774Ratregion
5073302RH137357213204041716640417379Ratregion
5074320RH137948229202041944820419672Ratregion
5074482RH138042138202104364221043780Ratregion
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5074662RH138146201204672303446723235Ratregion
5063364BI301706194204224221142242405Ratregion
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5064348BI302056158204376027243760430Ratregion
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5066050BE116640185203222109132221276Ratregion
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5063260BF404042222204707152647071748Ratregion
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5066452AU048348224204395898643959210Ratregion
5084106AI013034126204257072042570846Ratregion
5084144AI013181148202505216125052309Ratregion
5084144AI013181148202505216125052309Ratregion
5086102BM383904198204391531143915509Ratregion
5087209BQ209200213204377318243773395Ratregion
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5083367AW521654247204068539240685639Ratregion
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5083633BE100931151203314265533142806Ratregion
5088673AU048709235202334462223344857Ratregion
5088673AU048709235202334464623344857Ratregion
5090575AU049833183202568547925685664Ratregion
5084156AA893804198204699783846998036Ratregion
5081709BG371929132203022733930227471Ratregion
5090295AU049666171202117125921171428Ratregion
5081861BE118577217201768628417686501Ratregion
5082135BF409885126204644108646441212Ratregion
5085032AI008992216203170915431709370Ratregion
5090693AU049904188202455662224556810Ratregion
5080856RH141822218202784608627846305Ratregion
5085766BM390898150204726637447266524Ratregion
5089999AU049490166202306119623061362Ratregion
5080952RH141878187204345951643459703Ratregion
5084506AI235289157201940945319409610Ratregion
5082767BF390057182204430112844301310Ratregion
5081192RH142018183202791473027914913Ratregion
5083183BF390947207204321059643210803Ratregion
5083223BI275478193203023650830236702Ratregion
5083261BI275884171202981958629819757Ratregion
5086415AW529882150203712527137125421Ratregion
5081370AI029744195203023052930230724Ratregion
5081521BE117161202204671347946713681Ratregion
5085555BM390539160202505177025051930Ratregion
5085555BM390539160202505177025051930Ratregion
5083445BE100029150203263134832631498Ratregion
5081927BF415334135203005193430052069Ratregion
5083727AA892131173204742211447422287Ratregion
5507511ECD11837559204611824046118799Ratregion
5507583Aim11646204743099947432645Ratregion
5503242UniSTS:237466304204173326341733567Ratregion
5503478UniSTS:462689558203008031230080870Ratregion
5503956Ranbp21467202647199126473458Ratregion
5507725REN49511253204611823146118484Ratregion
5507727REN49512243204611820646118449Ratregion
5507729REN49579255204609701846097273Ratregion
5507731REN49686247204607731946077566Ratregion
5507733REN49712231204607122246071453Ratregion
5507735REN49778241204605577946056020Ratregion
5507737REN49968258204601312746013385Ratregion
5507739REN50740240204586573045865970Ratregion
5504250G42353120204607958146079701Ratregion
5504957Pla2g12b494202738821227388706Ratregion
5505857UniSTS:495955109204449114644491255Ratregion
5506052UniSTS:498241372203320474633205118Ratregion
5506451Foxo3518204568622245686740Ratregion
5506535FYN_1578639204295929842959937Ratregion
5506447UniSTS:480303980203021710830218088Ratregion
5506644ECD006770204646207646463737Ratregion
5506644ECD006770204646218746463737Ratregion
5506849G46449121202709200227092123Ratregion
5500039UniSTS:236342211204648345846483669Ratregion
5500045UniSTS:236356194202784548127845675Ratregion
5499505stSG6027320204758827147588593Ratregion
5500412GDB:5550190202622304826223270Ratregion
5500302D20S108075202133248921332564Ratregion
5500585RH136086192202649165526492359Ratregion
5501165PMC151788P1333203576634835766681Ratregion
5501410Nodal914202937522229376136Ratregion
5501566D7S5121185202872788828729073Ratregion
5505618UniSTS:4856020202438548524385544Ratregion
5505712UniSTS:4895661092204449084844491940Ratregion
5501780MARC_12153-12154:1004708400:3135202805570528056410Ratregion
5502136MARC_5393-5394:996690344:1417203586104535861462Ratregion
5502696SAR1A109202962829629628783Ratregion
5507327GDB:1924960204371124943711393Ratregion
5502307RH124339154202575424025754394Ratregion
5502307RH124339154202575424025754394Ratregion
5502325RH124528249202532743725327686Ratregion
Position Markers

Flank 1: (D20Rat5)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22017,617,832 - 17,617,956 (+)MAPPER
Rnor_6.02018,872,150 - 18,872,273NCBI
Rnor_5.02021,025,611 - 21,025,734UniSTS
RGSC_v3.42018,411,846 - 18,411,969UniSTS
RGSC_v3.42018,411,845 - 18,411,969RGD
RGSC_v3.12018,425,634 - 18,426,179RGD
Celera2019,015,307 - 19,015,430UniSTS
RH 2.0 Map20258.6RGD
SHRSP x BN Map2016.6599RGD
FHH x ACI Map209.1099RGD
Cytogenetic Map20p11UniSTS
Peak: (D20Rat26)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22027,360,454 - 27,360,594 (+)MAPPER
Rnor_6.02028,979,679 - 28,979,818NCBI
Rnor_5.02030,784,005 - 30,784,144UniSTS
Celera2028,803,957 - 28,804,096UniSTS
SHRSP x BN Map2021.46RGD
SHRSP x BN Map2021.46UniSTS
FHH x ACI Map2012.4099RGD
Flank 2: (D20Rat29)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22047,606,609 - 47,606,836 (+)MAPPER
Rnor_6.02049,108,730 - 49,108,956NCBI
Rnor_5.02050,747,252 - 50,747,478UniSTS
RGSC_v3.42048,055,659 - 48,055,886RGD
RGSC_v3.42048,055,660 - 48,055,886UniSTS
RGSC_v3.12048,084,356 - 48,084,583RGD
Celera2052,382,178 - 52,382,404UniSTS
RH 3.4 Map20516.71UniSTS
RH 3.4 Map20516.71RGD
RH 2.0 Map20605.6RGD
SHRSP x BN Map2043.54RGD
FHH x ACI Map2031.8299RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354642Despr15Despair related QTL 150.0027locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)20124159021Rat
1600382Edcs3Endometrial carcinoma susceptibility QTL33.50.003uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)20125159026Rat
2317851Alcrsp22Alcohol response QTL 223.20.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)20127339237Rat
1641893Alcrsp7Alcohol response QTL 7response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)20127339237Rat
8694189Bw153Body weight QTL 1533.130.001body mass (VT:0001259)body weight gain (CMO:0000420)20129191651Rat
9590275Scort15Serum corticosterone level QTL 153.480.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)20129191651Rat
7411650Foco23Food consumption QTL 2320.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)20129191651Rat
9590109Sffal8Serum free fatty acids level QTL 85.320.01blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)20129191651Rat
9589155Insul32Insulin level QTL 326.380.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)20129191651Rat
6893685Bw111Body weight QTL 1112.70.004body mass (VT:0001259)body weight (CMO:0000012)20132578807Rat
7411668Foco32Food consumption QTL 3280.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)20136600972Rat
9590252Scort12Serum corticosterone level QTL 1220.460.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)20136600972Rat
2305926Iddm37Insulin dependent diabetes mellitus QTL 376blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)20152784246527842Rat
1641915Colcr9Colorectal carcinoma resistance QTL 92.970.0024intestine integrity trait (VT:0010554)benign colorectal tumor number (CMO:0001795)20153065546530655Rat
1598816Memor12Memory QTL 122.4exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)20260683647606836Rat
2317057Aia27Adjuvant induced arthritis QTL 272.83joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)20289259726381954Rat
4889857Pur27Proteinuria QTL 2712.20.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)20460660717617956Rat
1558640Prcs2Prostate cancer susceptibility QTL 23.3prostate integrity trait (VT:0010571)percentage of study population developing ventral prostate tumorous lesions during a period of time (CMO:0000943)20460660717617956Rat
1581577Pur15Proteinuria QTL 154.380.0002urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)20804241017617956Rat
4889870Pur30Proteinuria QTL 30190.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)20804241029322208Rat
7411652Foco24Food consumption QTL 240.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)201175751554435887Rat
9590092Insglur9Insulin/glucose ratio QTL 918.380.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)201175751554435887Rat
4889610Pancm3Pancreatic morphology QTL 33.750.001pancreas mass (VT:0010144)pancreas wet weight (CMO:0000626)201761783247606836Rat
2317880Alcrsp25Alcohol response QTL 252.3response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)201769755054435887Rat
2303626Vencon10Ventilatory control QTL 100.001respiration trait (VT:0001943)respiration rate (CMO:0000289)201919072154435887Rat
2303578Gluco50Glucose level QTL 502blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)202510672254435887Rat
2303587Bw93Body weight QTL 9313body mass (VT:0001259)body weight (CMO:0000012)202510672254435887Rat
2300188Bmd68Bone mineral density QTL 686.40.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)202510672254435887Rat
1331747Hrtrt16Heart rate QTL 163.163heart pumping trait (VT:2000009)heart rate (CMO:0000002)202520973454435887Rat
1598869Memor6Memory QTL 63.1exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)202924438854435887Rat
70158Bp60Blood pressure QTL 603arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)203161428444396023Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general number of animals used: 159 F2 females 2326163
qtl_general measurement method: 1 month old animals were weaned and fed the diabetogenic diet (DD) after 4 weeks on DD diet glucose level and plasma insulin level were measured; pancreas was weighed after OGTT when the animals were sacrificed 2326163
qtl_general the SS allele from CDS was responsible for the higher pancreatic weight 2326163
qtl_general software package used: one-way ANOVA and MultiQTL version 2.5 2326163
qtl_general this region is confirmed by co-segregation analysis; not detected in males 2326163