cytoplasm - Ontology Report - Rat Genome Database

ONTOLOGY REPORT - ANNOTATIONS

Term:	cytoplasm	go back to main search page
Accession:	GO:0005737	browse the term
Definition:	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
Synonyms:	xref:	Wikipedia:Cytoplasm

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Rat (10686) Mouse (11092) Human (11709) Chinchilla (10325) Bonobo (10773) Dog (7338) Squirrel (10382) Pig (7618) All
Genes (10686)

This term has 10686 annotated objects. The list is too large to display.

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Path 1
Term	Annotations
cellular_component	19949
cellular anatomical entity	19598
cytoplasm	10686
ADPG pyrophosphorylase complex +	0
APC-IQGAP complex	0
APC-IQGAP1-CLIP-170 complex	0
APC-IQGAP1-Cdc42 complex	0
APC-IQGAP1-Rac1 complex	0
APC-tubulin-IQGAP1 complex	0
Atg1/ULK1 kinase complex	8
Atg12-Atg5-Atg16 complex	3
CBM complex	3
CRD-mediated mRNA stability complex	6
CSK-GAP-A.p62 complex	0
CUGBP1-eIF2 complex	0
Cdc42 GTPase complex	0
Cvt complex	0
DNA gyrase complex	0
DNA topoisomerase IV complex	0
FHF complex	6
G-protein beta/gamma-Btk complex	0
G-protein beta/gamma-Raf-1 complex	0
G-protein beta/gamma-subunit complex	16
Golgi apparatus +	1402
HSP90-CDC37 chaperone complex	2
Myo2p-Vac17p-Vac8p transport complex	0
N-terminal protein acetyltransferase complex +	12
PAN complex	2
PHA granule	0
Par3-APC-KIF3A complex	0
RAVE complex	3
Rab-protein geranylgeranyltransferase complex	4
RasGAP-Fyn-Lyn-Yes complex	0
SCAR complex	10
SMN-Sm protein complex +	19
SNARE complex +	55
Scrib-APC complex	0
Scrib-APC-beta-catenin complex	3
Sid2-Mob1 complex	0
Ski complex	3
UFD1-NPL4 complex	2
VCP-NSFL1C complex	2
WASH complex	10
acetolactate synthase complex	0
acetyl-CoA carboxylase complex +	0
acidocalcisome +	0
alkyl hydroperoxide reductase complex	0
alpha,alpha-trehalose-phosphate synthase complex (UDP-forming)	0
anaerobic ribonucleoside-triphosphate reductase complex	0
anammoxosome	0
anthranilate synthase complex	0
apical cytoplasm +	3
basolateral cytoplasm +	0
beta-catenin destruction complex	10
calpain complex	0
carbamoyl-phosphate synthase complex	0
cell cortex +	350
cell plate	0
citrate lyase complex	0
contractile fiber +	245
crystalloid	0
cysteine synthase complex	0
cytoplasmic U snRNP body	0
cytoplasmic chromosome +	1
cytoplasmic cyclin-dependent protein kinase holoenzyme complex	2
cytoplasmic exosome (RNase complex) +	14
cytoplasmic microtubule +	84
cytoplasmic microtubule bundle	1
cytoplasmic region +	286
cytoplasmic ribonucleoprotein granule +	230
cytoplasmic ubiquitin ligase complex +	23
cytoplasmic vesicle +	1834
cytosol +	3836
dense body	8
ectoplasm	1
electron transfer flavoprotein complex +	0
endoplasmic reticulum +	1302
endoplasmic reticulum-Golgi intermediate compartment +	93
eukaryotic translation elongation factor 1 complex	4
eukaryotic translation initiation factor 2 complex	6
eukaryotic translation initiation factor 2B complex	6
eukaryotic translation initiation factor 3 complex +	19
eukaryotic translation initiation factor 4F complex	8
fusome	0
glutamate-cysteine ligase complex	2
glutamate-tRNA ligase complex	0
glycerol-3-phosphate dehydrogenase complex	3
glycine cleavage complex	4
glycine reductase complex	0
glycine-tRNA ligase complex	0
glycogen granule	8
glycolate oxidase complex	0
goblet cell theca	0
histone mRNA stem-loop binding complex	0
homodimeric decaprenyl diphosphate synthase complex	0
homomeric SMAD protein complex	0
hydrogenosome +	0
hydroxyisourate hydrolase complex	0
imidazoleglycerol-phosphate synthase complex	0
keratohyalin granule	3
membrane coat +	101
methane-oxidizing organelle	0
methionyl glutamyl tRNA synthetase complex	0
methylosome	13
microbody +	149
mitochondrial cloud	0
mitochondrion +	1634
mitosome	0
mitotic spindle assembly checkpoint MAD1-MAD2 complex	0
monolayer-surrounded lipid storage body outer lipid monolayer	0
multi-eIF complex	2
nascent polypeptide-associated complex	6
neurofilament	13
ooplasm	1
ornithine carbamoyltransferase complex	0
pICln-Sm protein complex	6
paraferritin complex	1
perinuclear region of cytoplasm +	757
periphagosomal region of cytoplasm	0
phagophore	0
phagophore assembly site +	32
phenylalanine-tRNA ligase complex	2
phosphoenolpyruvate-dependent sugar phosphotransferase complex	0
phosphopantothenoylcysteine decarboxylase complex	0
phosphoribosylaminoimidazole carboxylase complex	0
phosphorylase kinase complex	5
phragmoplast	0
phragmosome	0
pirellulosome	0
plasma membrane-derived chromatophore +	0
plasma membrane-derived photosystem I	0
plasma membrane-derived thylakoid photosystem II	0
plastid +	0
pole plasm +	24
polkadots	2
polyketide synthase complex +	0
preprophase band	0
procentriole	0
procentriole replication complex	0
protein body	0
protein farnesyltransferase complex	2
protein phosphatase type 1 complex	13
protein-N(PI)-phosphohistidine-sugar phosphotransferase complex	0
pyruvate dehydrogenase (lipoamide) phosphatase complex +	1
pyruvate dehydrogenase complex +	8
ribulose bisphosphate carboxylase complex +	0
sarcoplasm +	81
sarcosine oxidase complex	0
scintillon	0
serine-pyruvate aminotransferase complex	1
signal recognition particle +	10
spectrosome	0
subsynaptic reticulum	0
sulfate adenylyltransferase complex (ATP)	0
thioglucosidase complex	0
translation initiation complex +	1
translation initiation ternary complex	1
translation preinitiation complex +	21
translation release factor complex	4
transnitrosylase complex +	0
tricarboxylic acid cycle enzyme complex +	18
type I site-specific deoxyribonuclease complex	0
type II site-specific deoxyribonuclease complex	0
type III site-specific deoxyribonuclease complex	0
type IV site-specific deoxyribonuclease complex	0
urease complex	0
vacuolar transporter chaperone complex	0
vacuole +	578
viral assembly intermediate	0
yolk +	1

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.

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