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ONTOLOGY REPORT - ANNOTATIONS
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Term:
cytoplasm
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Accession:
GO:0005737
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Definition:
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
Synonyms:
xref:
Wikipedia:Cytoplasm
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Rat (11397)
Mouse (11373)
Human (12320)
Chinchilla (8003)
Bonobo (8351)
Dog (9947)
Squirrel (8086)
Pig (9837)
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Genes (11397)
This term has 11397 annotated objects. The list is too large to display.
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Term paths to the root
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Path 1
Term
Annotations
cellular_component
20137
cellular anatomical entity
19837
cytoplasm
11397
ADPG pyrophosphorylase complex
+
0
APC-IQGAP complex
0
APC-IQGAP1-CLIP-170 complex
0
APC-IQGAP1-Cdc42 complex
0
APC-IQGAP1-Rac1 complex
0
APC-tubulin-IQGAP1 complex
0
ATP-independent citrate lyase complex
0
Atg1/ULK1 kinase complex
8
Atg12-Atg5-Atg16 complex
3
CBM complex
3
CRD-mediated mRNA stability complex
6
CSK-GAP-A.p62 complex
0
CUGBP1-eIF2 complex
0
Cdc42 GTPase complex
0
Cvt complex
0
FHF complex
6
G-protein beta/gamma-Btk complex
0
G-protein beta/gamma-Raf-1 complex
0
G-protein beta/gamma-subunit complex
15
Golgi apparatus
+
1421
HSP90-CDC37 chaperone complex
2
Myo2p-Vac17p-Vac8p transport complex
0
N-terminal protein acetyltransferase complex
+
12
PAN complex
2
PHA granule
0
Par3-APC-KIF3A complex
0
RAVE complex
3
Rab-protein geranylgeranyltransferase complex
4
RasGAP-Fyn-Lyn-Yes complex
0
SCAR complex
13
SMN-Sm protein complex
+
20
SNARE complex
+
54
Scrib-APC complex
0
Scrib-APC-beta-catenin complex
3
Sid2-Mob1 complex
0
Ski complex
3
UFD1-NPL4 complex
2
VCP-NSFL1C complex
2
WASH complex
10
acetolactate synthase complex
1
acetyl-CoA carboxylase complex
+
0
acidocalcisome
+
0
alkyl hydroperoxide reductase complex
0
alpha,alpha-trehalose-phosphate synthase complex (UDP-forming)
0
anaerobic ribonucleoside-triphosphate reductase complex
0
anammoxosome
0
anthranilate synthase complex
0
apical cytoplasm
+
4
basolateral cytoplasm
+
0
beta-catenin destruction complex
10
calpain complex
0
carbamoyl-phosphate synthase complex
0
cell cortex
+
345
cell plate
0
contractile fiber
+
247
crystalloid
0
cysteine synthase complex
0
cytoplasmic U snRNP body
0
cytoplasmic chromosome
+
0
cytoplasmic cyclin-dependent protein kinase holoenzyme complex
2
cytoplasmic exosome (RNase complex)
+
14
cytoplasmic microtubule
+
82
cytoplasmic microtubule bundle
1
cytoplasmic region
+
295
cytoplasmic ribonucleoprotein granule
+
246
cytoplasmic ubiquitin ligase complex
+
30
cytoplasmic vesicle
+
1909
cytosol
+
4245
dense body
8
dynein axonemal particle
12
ectoplasm
1
electron transfer flavoprotein complex
+
0
endoplasmic reticulum
+
1749
endoplasmic reticulum-Golgi intermediate compartment
+
100
eukaryotic translation elongation factor 1 complex
4
eukaryotic translation initiation factor 2 complex
6
eukaryotic translation initiation factor 2B complex
6
eukaryotic translation initiation factor 3 complex
+
18
eukaryotic translation initiation factor 4F complex
7
fusome
0
glutamate-cysteine ligase complex
2
glutamate-tRNA ligase complex
0
glycerol-3-phosphate dehydrogenase complex
3
glycine cleavage complex
5
glycine reductase complex
0
glycine-tRNA ligase complex
0
glycogen granule
8
glycolate oxidase complex
0
goblet cell theca
0
histone mRNA stem-loop binding complex
0
homodimeric decaprenyl diphosphate synthase complex
0
homomeric SMAD protein complex
0
hydrogenosome
+
0
hydroxyisourate hydrolase complex
0
imidazoleglycerol-phosphate synthase complex
0
keratohyalin granule
4
membrane coat
+
100
methane-oxidizing organelle
0
methionyl glutamyl tRNA synthetase complex
0
methylosome
12
microbody
+
159
mitochondrial cloud
0
mitochondrion
+
1669
mitosome
0
mitotic spindle assembly checkpoint MAD1-MAD2 complex
0
monolayer-surrounded lipid storage body outer lipid monolayer
0
multi-eIF complex
2
nascent polypeptide-associated complex
10
neurofilament
13
ooplasm
1
ornithine carbamoyltransferase complex
0
pICln-Sm protein complex
6
paraferritin complex
1
perinuclear region of cytoplasm
+
765
periphagosomal region of cytoplasm
0
phagophore
0
phagophore assembly site
+
32
phenylalanine-tRNA ligase complex
2
phosphoenolpyruvate-dependent sugar phosphotransferase complex
0
phosphopantothenoylcysteine decarboxylase complex
1
phosphoribosylaminoimidazole carboxylase complex
0
phosphorylase kinase complex
6
phragmoplast
0
phragmosome
0
pirellulosome
0
plasma membrane-derived chromatophore
+
0
plasma membrane-derived photosystem I
0
plasma membrane-derived thylakoid photosystem II
0
plastid
+
0
pole plasm
+
23
polkadots
2
polyketide synthase complex
+
0
preprophase band
0
procentriole
0
procentriole replication complex
0
proteasome storage granule
2
protein body
0
protein farnesyltransferase complex
2
protein phosphatase type 1 complex
13
protein-N(PI)-phosphohistidine-sugar phosphotransferase complex
0
pyruvate dehydrogenase (lipoamide) phosphatase complex
+
0
pyruvate dehydrogenase complex
+
9
ribulose bisphosphate carboxylase complex
+
0
sarcoplasm
+
81
sarcosine oxidase complex
0
scintillon
0
serine-pyruvate aminotransferase complex
1
signal recognition particle
+
7
spectrosome
0
subsynaptic reticulum
0
sulfate adenylyltransferase complex (ATP)
0
thioglucosidase complex
0
translation initiation complex
+
1
translation initiation ternary complex
1
translation preinitiation complex
+
21
translation release factor complex
3
transnitrosylase complex
+
0
tricarboxylic acid cycle enzyme complex
+
16
type I site-specific deoxyribonuclease complex
0
type II site-specific deoxyribonuclease complex
0
type III site-specific deoxyribonuclease complex
0
type IV site-specific deoxyribonuclease complex
0
urease complex
0
vacuolar transporter chaperone complex
0
vacuole
+
600
viral assembly intermediate
0
yolk
+
1
Path 2
Term
Annotations
cellular_component
20137
cellular anatomical entity
19837
intracellular anatomical structure
14407
cytoplasm
11397
ADPG pyrophosphorylase complex
+
0
APC-IQGAP complex
0
APC-IQGAP1-CLIP-170 complex
0
APC-IQGAP1-Cdc42 complex
0
APC-IQGAP1-Rac1 complex
0
APC-tubulin-IQGAP1 complex
0
ATP-independent citrate lyase complex
0
Atg1/ULK1 kinase complex
8
Atg12-Atg5-Atg16 complex
3
CBM complex
3
CRD-mediated mRNA stability complex
6
CSK-GAP-A.p62 complex
0
CUGBP1-eIF2 complex
0
Cdc42 GTPase complex
0
Cvt complex
0
FHF complex
6
G-protein beta/gamma-Btk complex
0
G-protein beta/gamma-Raf-1 complex
0
G-protein beta/gamma-subunit complex
15
Golgi apparatus
+
1421
HSP90-CDC37 chaperone complex
2
Myo2p-Vac17p-Vac8p transport complex
0
N-terminal protein acetyltransferase complex
+
12
PAN complex
2
PHA granule
0
Par3-APC-KIF3A complex
0
RAVE complex
3
Rab-protein geranylgeranyltransferase complex
4
RasGAP-Fyn-Lyn-Yes complex
0
SCAR complex
13
SMN-Sm protein complex
+
20
SNARE complex
+
54
Scrib-APC complex
0
Scrib-APC-beta-catenin complex
3
Sid2-Mob1 complex
0
Ski complex
3
UFD1-NPL4 complex
2
VCP-NSFL1C complex
2
WASH complex
10
acetolactate synthase complex
1
acetyl-CoA carboxylase complex
+
0
acidocalcisome
+
0
alkyl hydroperoxide reductase complex
0
alpha,alpha-trehalose-phosphate synthase complex (UDP-forming)
0
anaerobic ribonucleoside-triphosphate reductase complex
0
anammoxosome
0
anthranilate synthase complex
0
apical cytoplasm
+
4
basolateral cytoplasm
+
0
beta-catenin destruction complex
10
calpain complex
0
carbamoyl-phosphate synthase complex
0
cell cortex
+
345
cell plate
0
contractile fiber
+
247
crystalloid
0
cysteine synthase complex
0
cytoplasmic U snRNP body
0
cytoplasmic chromosome
+
0
cytoplasmic cyclin-dependent protein kinase holoenzyme complex
2
cytoplasmic exosome (RNase complex)
+
14
cytoplasmic microtubule
+
82
cytoplasmic microtubule bundle
1
cytoplasmic region
+
295
cytoplasmic ribonucleoprotein granule
+
246
cytoplasmic ubiquitin ligase complex
+
30
cytoplasmic vesicle
+
1909
cytosol
+
4245
dense body
8
dynein axonemal particle
12
ectoplasm
1
electron transfer flavoprotein complex
+
0
endoplasmic reticulum
+
1749
endoplasmic reticulum-Golgi intermediate compartment
+
100
eukaryotic translation elongation factor 1 complex
4
eukaryotic translation initiation factor 2 complex
6
eukaryotic translation initiation factor 2B complex
6
eukaryotic translation initiation factor 3 complex
+
18
eukaryotic translation initiation factor 4F complex
7
fusome
0
glutamate-cysteine ligase complex
2
glutamate-tRNA ligase complex
0
glycerol-3-phosphate dehydrogenase complex
3
glycine cleavage complex
5
glycine reductase complex
0
glycine-tRNA ligase complex
0
glycogen granule
8
glycolate oxidase complex
0
goblet cell theca
0
histone mRNA stem-loop binding complex
0
homodimeric decaprenyl diphosphate synthase complex
0
homomeric SMAD protein complex
0
hydrogenosome
+
0
hydroxyisourate hydrolase complex
0
imidazoleglycerol-phosphate synthase complex
0
keratohyalin granule
4
membrane coat
+
100
methane-oxidizing organelle
0
methionyl glutamyl tRNA synthetase complex
0
methylosome
12
microbody
+
159
mitochondrial cloud
0
mitochondrion
+
1669
mitosome
0
mitotic spindle assembly checkpoint MAD1-MAD2 complex
0
monolayer-surrounded lipid storage body outer lipid monolayer
0
multi-eIF complex
2
nascent polypeptide-associated complex
10
neurofilament
13
ooplasm
1
ornithine carbamoyltransferase complex
0
pICln-Sm protein complex
6
paraferritin complex
1
perinuclear region of cytoplasm
+
765
periphagosomal region of cytoplasm
0
phagophore
0
phagophore assembly site
+
32
phenylalanine-tRNA ligase complex
2
phosphoenolpyruvate-dependent sugar phosphotransferase complex
0
phosphopantothenoylcysteine decarboxylase complex
1
phosphoribosylaminoimidazole carboxylase complex
0
phosphorylase kinase complex
6
phragmoplast
0
phragmosome
0
pirellulosome
0
plasma membrane-derived chromatophore
+
0
plasma membrane-derived photosystem I
0
plasma membrane-derived thylakoid photosystem II
0
plastid
+
0
pole plasm
+
23
polkadots
2
polyketide synthase complex
+
0
preprophase band
0
procentriole
0
procentriole replication complex
0
proteasome storage granule
2
protein body
0
protein farnesyltransferase complex
2
protein phosphatase type 1 complex
13
protein-N(PI)-phosphohistidine-sugar phosphotransferase complex
0
pyruvate dehydrogenase (lipoamide) phosphatase complex
+
0
pyruvate dehydrogenase complex
+
9
ribulose bisphosphate carboxylase complex
+
0
sarcoplasm
+
81
sarcosine oxidase complex
0
scintillon
0
serine-pyruvate aminotransferase complex
1
signal recognition particle
+
7
spectrosome
0
subsynaptic reticulum
0
sulfate adenylyltransferase complex (ATP)
0
thioglucosidase complex
0
translation initiation complex
+
1
translation initiation ternary complex
1
translation preinitiation complex
+
21
translation release factor complex
3
transnitrosylase complex
+
0
tricarboxylic acid cycle enzyme complex
+
16
type I site-specific deoxyribonuclease complex
0
type II site-specific deoxyribonuclease complex
0
type III site-specific deoxyribonuclease complex
0
type IV site-specific deoxyribonuclease complex
0
urease complex
0
vacuolar transporter chaperone complex
0
vacuole
+
600
viral assembly intermediate
0
yolk
+
1