Akt2 (AKT serine/threonine kinase 2) - Rat Genome Database

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Gene: Akt2 (AKT serine/threonine kinase 2) Rattus norvegicus
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Symbol: Akt2
Name: AKT serine/threonine kinase 2
RGD ID: 2082
Description: Enables ATP binding activity; protein kinase C binding activity; and protein serine/threonine kinase activity. Involved in several processes, including negative regulation of nitrogen compound metabolic process; positive regulation of glucose import; and positive regulation of nitrogen compound metabolic process. Acts upstream of or within cellular response to insulin stimulus and positive regulation of sodium ion transport. Located in several cellular components, including insulin-responsive compartment; mitochondrion; and sarcoplasmic reticulum. Used to study high grade glioma and ischemia. Biomarker of colorectal cancer; hepatocellular carcinoma; hypertension; and obesity. Human ortholog(s) of this gene implicated in glucose metabolism disease (multiple); hypoinsulinemic hypoglycemia with hemihypertrophy; and reproductive organ cancer (multiple). Orthologous to human AKT2 (AKT serine/threonine kinase 2); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; altered insulin responsive facilitative sugar transporter mediated glucose transport pathway; INTERACTS WITH (S)-nicotine; 1,2-dimethylhydrazine; 2,2',4,4'-Tetrabromodiphenyl ether.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: AKT2 kinase; murine thymoma viral (v-akt) oncogene homolog 2; PKB beta; protein kinase Akt-2; protein kinase B beta; protein kinase B, beta; RAC protein kinase beta RAC-PK beta; RAC protein kinase beta, RAC-PK beta; RAC-beta serine/threonine-protein kinase; RAC-PK-beta; thymoma viral proto-oncogene 2; v-akt murine thymoma viral oncogene homolog 2
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2182,877,228 - 82,933,828 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl182,883,547 - 82,933,817 (+)Ensembl
Rnor_6.0184,400,939 - 84,451,223 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl184,411,726 - 84,450,162 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0185,617,612 - 85,667,423 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4182,686,233 - 82,726,544 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1182,764,343 - 82,804,655 (+)NCBI
Celera177,307,278 - 77,345,638 (+)NCBICelera
Cytogenetic Map1q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-gambogic acid  (ISO)
(S)-nicotine  (EXP,ISO)
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (EXP,ISO)
1-chloro-2,4-dinitrobenzene  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2-ethoxyethanol  (EXP)
2-methoxyethanol  (EXP)
2-nitrotoluene  (EXP)
4,4'-sulfonyldiphenol  (EXP)
4-nonylphenol  (EXP)
4-vinylcyclohexene dioxide  (ISO)
5-fluorouracil  (ISO)
acetamide  (EXP)
acetylsalicylic acid  (ISO)
acrolein  (ISO)
acrylamide  (EXP)
afimoxifene  (ISO)
aldehydo-D-glucose  (ISO)
all-trans-retinoic acid  (EXP)
alpha-pinene  (ISO)
anthra[1,9-cd]pyrazol-6(2H)-one  (ISO)
antirheumatic drug  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (ISO)
Benzo[k]fluoranthene  (ISO)
berberine  (ISO)
Bergenin  (ISO)
bis(2-chloroethyl) sulfide  (ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
Bisphenol B  (EXP)
bisphenol F  (ISO)
bromochloroacetic acid  (EXP)
butanal  (ISO)
Butylbenzyl phthalate  (EXP)
butyric acid  (EXP)
C60 fullerene  (EXP)
cadmium dichloride  (EXP,ISO)
cannabidiol  (ISO)
carbamazepine  (ISO)
carbon nanotube  (ISO)
carmustine  (ISO)
chlorpyrifos  (ISO)
cisplatin  (ISO)
clenbuterol  (EXP)
clozapine  (EXP)
colforsin daropate hydrochloride  (EXP)
copper atom  (ISO)
copper(0)  (ISO)
cortisol  (ISO)
crocin-1  (ISO)
Cuprizon  (EXP)
curcumin  (ISO)
D-glucose  (ISO)
decabromodiphenyl ether  (EXP)
dexamethasone  (EXP,ISO)
diarsenic trioxide  (ISO)
diazinon  (EXP)
dichlorine  (EXP)
diclofenac  (ISO)
dieldrin  (EXP)
dimethoate  (ISO)
dioxygen  (ISO)
dobutamine  (EXP)
dorsomorphin  (ISO)
doxorubicin  (ISO)
ethanol  (EXP,ISO)
finasteride  (EXP)
flutamide  (EXP)
genistein  (ISO)
glucose  (ISO)
haloperidol  (EXP)
hexachlorobenzene  (EXP)
hydralazine  (ISO)
hydrogen cyanide  (ISO)
hydroquinone  (ISO)
L-ascorbic acid  (ISO)
lead diacetate  (EXP,ISO)
lead(0)  (ISO)
lead(2+)  (ISO)
losartan  (ISO)
maleic acid  (ISO)
mercury atom  (ISO)
mercury(0)  (ISO)
metformin  (EXP)
methimazole  (ISO)
methoxychlor  (ISO)
methylglyoxal  (ISO)
methylseleninic acid  (ISO)
microcystin-LR  (ISO)
N,N-diethyl-m-toluamide  (EXP)
N-[3-(aminomethyl)benzyl]acetamidine  (ISO)
N-methyl-N-nitrosourea  (EXP)
N-nitrosodiethylamine  (ISO)
N-Vinyl-2-pyrrolidone  (EXP)
nickel atom  (ISO)
nickel dichloride  (EXP)
nicotine  (EXP,ISO)
nitrofen  (EXP)
obeticholic acid  (ISO)
oxaliplatin  (EXP)
oxidopamine  (EXP)
ozone  (EXP,ISO)
p-menthan-3-ol  (ISO)
Pachymic acid  (ISO)
paclitaxel  (ISO)
paracetamol  (EXP)
paraquat  (ISO)
PCB138  (EXP)
perfluorododecanoic acid  (EXP)
perfluoroheptanoic acid  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
perfluoroundecanoic acid  (EXP)
permethrin  (EXP)
phenobarbital  (EXP)
pirinixic acid  (EXP)
propiconazole  (ISO)
quercetin  (EXP,ISO)
resveratrol  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
sirolimus  (ISO)
sodium arsenite  (ISO)
sodium tungstate  (ISO)
streptozocin  (EXP)
sulindac  (EXP,ISO)
tert-butyl hydroperoxide  (ISO)
testosterone  (ISO)
titanium dioxide  (ISO)
topotecan  (EXP)
torcetrapib  (ISO)
triciribine  (ISO)
triphenylstannane  (EXP)
Triptolide  (EXP)
valproic acid  (ISO)
vincristine  (EXP)
xanthohumol  (ISO)
zinc atom  (EXP)
zinc(0)  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
activation of GTPase activity  (ISO)
carbohydrate transport  (IEA)
cellular response to high light intensity  (ISO)
cellular response to hormone stimulus  (IEP)
cellular response to insulin stimulus  (IMP,ISO)
cellular response to organic cyclic compound  (IDA)
glucose metabolic process  (ISO)
glycogen biosynthetic process  (IEA)
insulin receptor signaling pathway  (ISO)
intracellular protein transmembrane transport  (ISO,ISS)
intracellular signal transduction  (IBA)
negative regulation of apoptotic process  (IMP,ISO)
negative regulation of cysteine-type endopeptidase activity involved in apoptotic process  (IMP)
negative regulation of long-chain fatty acid import across plasma membrane  (ISO)
negative regulation of RNA splicing  (IMP)
peptidyl-serine phosphorylation  (IBA)
peripheral nervous system myelin maintenance  (ISO)
positive regulation of adipose tissue development  (ISO)
positive regulation of cell migration  (IMP,ISO)
positive regulation of cell motility  (ISO)
positive regulation of cell population proliferation  (ISO)
positive regulation of fatty acid beta-oxidation  (ISO)
positive regulation of gene expression  (IMP)
positive regulation of glucose import  (IMP,ISO)
positive regulation of glucose metabolic process  (ISO)
positive regulation of glycogen biosynthetic process  (ISO)
positive regulation of mitochondrial membrane potential  (ISO)
positive regulation of nitric oxide biosynthetic process  (IMP)
positive regulation of peptidyl-serine phosphorylation  (IMP)
positive regulation of positive chemotaxis  (IDA)
positive regulation of protein phosphorylation  (IMP,ISO)
positive regulation of protein targeting to membrane  (ISO,ISS)
positive regulation of signal transduction  (IMP)
positive regulation of sodium ion transport  (IMP)
positive regulation of transcription by RNA polymerase II  (IMP)
positive regulation of vesicle fusion  (ISO,ISS)
protein kinase B signaling  (IMP)
protein localization to nucleus  (ISO)
protein localization to plasma membrane  (ISO)
protein phosphorylation  (IDA,ISO,TAS)
regulation of translation  (IEA)
response to hypoxia  (IEP)
response to insulin  (IDA,IEP)
response to muscle activity  (IEP)
response to nutrient levels  (IEP)
response to osmotic stress  (IEP)
retinal rod cell apoptotic process  (ISO)

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
acute myeloid leukemia pathway  (IEA)
altered insulin responsive facilitative sugar transporter mediated glucose transport pathway  (ISO)
altered phosphatidylinositol 3-kinase-Akt signaling pathway  (ISO)
apoptotic cell death pathway  (IEA)
B cell receptor signaling pathway  (IEA)
ceramide signaling pathway  (IEA)
Chagas disease pathway  (IEA)
chemokine mediated signaling pathway  (IEA)
chronic myeloid leukemia pathway  (IEA)
colorectal cancer pathway  (IEA)
E-cadherin signaling pathway  (ISO)
endometrial cancer pathway  (IEA,ISO)
epidermal growth factor/neuregulin signaling pathway  (IEA)
Fc epsilon receptor mediated signaling pathway  (IEA)
Fc gamma receptor mediated signaling pathway  (IEA)
glioma pathway  (IEA)
hepatitis C pathway  (IEA)
influenza A pathway  (IEA)
insulin responsive facilitative sugar transporter mediated glucose transport pathway  (IMP,ISO)
insulin signaling pathway  (IEA,ISO)
Jak-Stat signaling pathway  (IEA)
measles pathway  (IEA)
melanoma pathway  (IEA)
mitogen activated protein kinase signaling pathway  (IEA)
mTOR signaling pathway  (IEA)
neurotrophic factor signaling pathway  (IEA)
non-small cell lung carcinoma pathway  (IEA)
pancreatic cancer pathway  (IEA,ISO)
phosphatidylinositol 3-kinase-Akt signaling pathway  (IMP,ISO)
prostate cancer pathway  (IEA)
renal cell carcinoma pathway  (IEA)
small cell lung carcinoma pathway  (IEA)
T cell receptor signaling pathway  (IEA)
Toll-like receptor signaling pathway  (IEA)
toxoplasmosis pathway  (IEA)
tuberculosis pathway  (IEA)
type 2 diabetes mellitus pathway  (ISO)
vascular endothelial growth factor signaling pathway  (IEA)

References

References - curated
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8. Choi CS, etal., Proc Natl Acad Sci U S A. 2007 Oct 16;104(42):16480-5. Epub 2007 Oct 8.
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18. George S, etal., Science. 2004 May 28;304(5675):1325-8.
19. GOA data from the GO Consortium
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21. Hernandez R, etal., FEBS Lett. 2001 Apr 13;494(3):225-31.
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37. NCBI rat LocusLink and RefSeq merged data July 26, 2002
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39. OMIM Disease Annotation Pipeline
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42. Peterson JM, etal., Am J Physiol Cell Physiol. 2008 Aug;295(2):C521-8. Epub 2008 May 28.
43. Pipeline to import KEGG annotations from KEGG into RGD
44. Pipeline to import Pathway Interaction Database annotations from NCI into RGD
45. Pu P, etal., Tumour Biol. 2004 Jul-Aug;25(4):172-8.
46. Rajala RV, etal., Vitam Horm. 2009;80:583-612.
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48. RGD automated data pipeline
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50. RGD automated import pipeline for gene-chemical interactions
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Additional References at PubMed
PMID:10983986   PMID:12181135   PMID:12767043   PMID:12799317   PMID:14701745   PMID:15546921   PMID:15764607   PMID:15802290   PMID:16236484   PMID:16338927   PMID:16452480   PMID:16540465  
PMID:16814735   PMID:17021050   PMID:17202487   PMID:17332325   PMID:18535289   PMID:18757828   PMID:18854316   PMID:18931307   PMID:19372382   PMID:19477150   PMID:20059950   PMID:20339009  
PMID:20448149   PMID:20728450   PMID:20923964   PMID:21148297   PMID:21907143   PMID:22031698   PMID:22391142   PMID:22778840   PMID:23229735   PMID:23499910   PMID:23746671   PMID:23785074  
PMID:24150286   PMID:25025572   PMID:25428377   PMID:26739650   PMID:27786542   PMID:27821807   PMID:28365702   PMID:30444896  


Genomics

Comparative Map Data
Akt2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2182,877,228 - 82,933,828 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl182,883,547 - 82,933,817 (+)Ensembl
Rnor_6.0184,400,939 - 84,451,223 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl184,411,726 - 84,450,162 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0185,617,612 - 85,667,423 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4182,686,233 - 82,726,544 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1182,764,343 - 82,804,655 (+)NCBI
Celera177,307,278 - 77,345,638 (+)NCBICelera
Cytogenetic Map1q21NCBI
AKT2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381940,230,317 - 40,285,345 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1940,230,317 - 40,285,536 (-)EnsemblGRCh38hg38GRCh38
GRCh371940,736,224 - 40,791,252 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361945,428,064 - 45,483,105 (-)NCBINCBI36hg18NCBI36
Build 341945,431,555 - 45,483,034NCBI
Celera1937,535,771 - 37,590,707 (-)NCBI
Cytogenetic Map19q13.2NCBI
HuRef1937,171,156 - 37,226,119 (-)NCBIHuRef
CHM1_11940,735,896 - 40,790,984 (-)NCBICHM1_1
Akt2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39727,290,977 - 27,340,251 (+)NCBIGRCm39mm39
GRCm39 Ensembl727,290,977 - 27,340,251 (+)Ensembl
GRCm38727,591,552 - 27,640,826 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl727,591,552 - 27,640,826 (+)EnsemblGRCm38mm10GRCm38
MGSCv37728,376,579 - 28,424,472 (+)NCBIGRCm37mm9NCBIm37
MGSCv36727,314,618 - 27,348,214 (+)NCBImm8
Celera722,173,505 - 22,221,607 (+)NCBICelera
Cytogenetic Map7A3NCBI
cM Map715.94NCBI
Akt2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955578967,593 - 1,004,438 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955578950,258 - 1,004,438 (+)NCBIChiLan1.0ChiLan1.0
AKT2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11945,791,043 - 45,846,359 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1945,791,800 - 45,840,271 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01937,275,799 - 37,331,971 (-)NCBIMhudiblu_PPA_v0panPan3
AKT2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11113,359,038 - 113,407,119 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1113,359,575 - 113,407,131 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1112,790,741 - 112,808,659 (+)NCBI
ROS_Cfam_1.01113,957,825 - 114,008,296 (+)NCBI
ROS_Cfam_1.0 Ensembl1113,958,298 - 114,008,293 (+)Ensembl
UMICH_Zoey_3.11113,546,597 - 113,564,514 (+)NCBI
UNSW_CanFamBas_1.01113,179,139 - 113,197,049 (+)NCBI
UU_Cfam_GSD_1.01114,172,976 - 114,190,895 (+)NCBI
Akt2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934914,224,502 - 14,265,970 (-)NCBI
SpeTri2.0NW_0049366612,652,568 - 2,694,039 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AKT2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl648,555,789 - 48,587,919 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1648,555,785 - 48,620,472 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2644,331,695 - 44,393,119 (-)NCBISscrofa10.2Sscrofa10.2susScr3
AKT2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1634,688,585 - 34,740,458 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl634,690,462 - 34,720,781 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607312,782,360 - 12,833,428 (-)NCBIVero_WHO_p1.0
Akt2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624925262,590 - 322,440 (-)NCBIHetGla_female_1.0hetGla2

Position Markers
SGC30851  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2182,930,435 - 82,930,690 (+)MAPPERmRatBN7.2
Rnor_6.0184,447,831 - 84,448,085NCBIRnor6.0
Rnor_5.0185,664,031 - 85,664,285UniSTSRnor5.0
RGSC_v3.4182,724,213 - 82,724,467UniSTSRGSC3.4
Celera177,343,307 - 77,343,561UniSTS
Cytogenetic Map1q22UniSTS
RH94820  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2X20,796,317 - 20,796,420 (+)MAPPERmRatBN7.2
mRatBN7.2182,932,647 - 82,932,762 (+)MAPPERmRatBN7.2
Rnor_6.0184,450,043 - 84,450,157NCBIRnor6.0
Rnor_6.0X21,396,878 - 21,396,980NCBIRnor6.0
Rnor_5.0185,666,243 - 85,666,357UniSTSRnor5.0
Rnor_5.0X22,053,861 - 22,053,963UniSTSRnor5.0
RGSC_v3.4X41,188,897 - 41,188,999UniSTSRGSC3.4
RGSC_v3.4182,726,425 - 82,726,539UniSTSRGSC3.4
Celera177,345,519 - 77,345,633UniSTS
CeleraX21,078,285 - 21,078,387UniSTS
Cytogenetic MapXq21UniSTS
Cytogenetic Map1q22UniSTS
AA957331  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2182,931,325 - 82,932,499 (+)MAPPERmRatBN7.2
Rnor_6.0184,448,721 - 84,449,894NCBIRnor6.0
Rnor_5.0185,664,921 - 85,666,094UniSTSRnor5.0
Rnor_5.0X22,054,121 - 22,054,316UniSTSRnor5.0
RGSC_v3.4182,725,103 - 82,726,276UniSTSRGSC3.4
Celera177,344,197 - 77,345,370UniSTS
RH 3.4 Map1826.5UniSTS
Cytogenetic MapXq21UniSTS
Cytogenetic Map1q22UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61433Cia2Collagen induced arthritis QTL 25joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)17843075491209302Rat
70225Bp58Blood pressure QTL 583.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132356093162846471Rat
2298545Neuinf8Neuroinflammation QTL 84.6nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)157336763151090257Rat
2302059Pia36Pristane induced arthritis QTL 363.80.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)14333300288333002Rat
631688Hcas2Hepatocarcinoma susceptibility QTL 230.0001liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)15925874115540829Rat
1582234Gluco18Glucose level QTL 183.40.0003blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)178479925123479925Rat
1578649Bmd8Bone mineral density QTL 84.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)14939317294393172Rat
1578654Bss10Bone structure and strength QTL 104femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)149393172159356837Rat
631495Bp96Blood pressure QTL 964.52arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)122340647102268831Rat
631512Scl6Serum cholesterol level QTL 69.6blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)17219768090508767Rat
2300164Bmd44Bone mineral density QTL 445.40.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)156949932101949932Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)149393289199050459Rat
1578780Cm52Cardiac mass QTL 523.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)181591954219808434Rat
2313402Anxrr24Anxiety related response QTL 24aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)148963584144267916Rat
1300121Hrtrt1Heart rate QTL 13.7heart pumping trait (VT:2000009)heart rate (CMO:0000002)165789093115540829Rat
1300172Bp172Blood pressure QTL 1723.56arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)13273727390665040Rat
1549903Bp267Blood pressure QTL 267arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)177876254106047988Rat
1554320Bmd1Bone mineral density QTL 112.20.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)150910886060548Rat
1358192Ept13Estrogen-induced pituitary tumorigenesis QTL 133.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)177494165122494165Rat
2313051Bss57Bone structure and strength QTL 573.70.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)143284731118944897Rat
2313059Bss55Bone structure and strength QTL 553.20.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143284731118944897Rat
2313072Bss53Bone structure and strength QTL 534.30.0001tibia length (VT:0004357)tibia length (CMO:0000450)143284731118944897Rat
2313078Bss54Bone structure and strength QTL 543.50.0001tibia area (VT:1000281)tibia midshaft cross-sectional area (CMO:0001717)143284731118944897Rat
2313083Bmd74Bone mineral density QTL 7440.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)182174743118944897Rat
2313094Bss58Bone structure and strength QTL 583.70.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)143284731118944897Rat
2313098Bmd70Bone mineral density QTL 703.60.0001tibia mineral mass (VT:1000283)cortical volumetric bone mineral density (CMO:0001730)143284731118944897Rat
2313099Bss56Bone structure and strength QTL 562.40.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)143284731118944897Rat
1358359Sradr1Stress Responsive Adrenal Weight QTL 14.74adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)130882023123479925Rat
61342Bp27Blood pressure QTL 273.40.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)15673266898773277Rat
61344Bp29Blood pressure QTL 297.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)178350581123350581Rat
4889494Scort2Serum corticosterone level QTL 24.2blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)180592172125592172Rat
6903308Scl36Serum cholesterol QTL 3620.0125blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)15386304190532583Rat
7411712Strs4Sensitivity to stroke QTL 48.7cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)178430536123430536Rat
7421628Bp361Blood pressure QTL 3610.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)166023617118608521Rat
10054135Gmadr2Adrenal mass QTL 21.970.0129adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)177857876122857876Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132737458199368955Rat

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:53
Count of miRNA genes:44
Interacting mature miRNAs:50
Transcripts:ENSRNOT00000025303
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 43 57 41 19 41 8 11 74 35 41 11 8
Low
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_017093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008759108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008759109 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008759110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008759111 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017588811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039101465 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039101467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039101469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039101472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039101473 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039101474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039101475 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC120811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473979 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D30041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ198085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JACYVU010000033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSRNOT00000025303   ⟹   ENSRNOP00000025303
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl182,883,700 - 82,933,817 (+)Ensembl
Rnor_6.0 Ensembl184,411,726 - 84,450,162 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000100544   ⟹   ENSRNOP00000076786
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl182,910,684 - 82,933,817 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000105853   ⟹   ENSRNOP00000078809
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl182,883,700 - 82,933,817 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000118840   ⟹   ENSRNOP00000095075
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl182,883,547 - 82,933,696 (+)Ensembl
RefSeq Acc Id: NM_017093   ⟹   NP_058789
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2182,894,322 - 82,932,767 (+)NCBI
Rnor_6.0184,411,726 - 84,450,162 (+)NCBI
Rnor_5.0185,617,612 - 85,667,423 (+)NCBI
RGSC_v3.4182,686,233 - 82,726,544 (+)RGD
Celera177,307,278 - 77,345,638 (+)RGD
Sequence:
RefSeq Acc Id: XM_008759108   ⟹   XP_008757330
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2182,898,053 - 82,933,828 (+)NCBI
Rnor_6.0184,413,060 - 84,451,223 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008759109   ⟹   XP_008757331
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2182,883,521 - 82,933,823 (+)NCBI
Rnor_6.0184,400,939 - 84,451,223 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008759110   ⟹   XP_008757332
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2182,897,970 - 82,933,823 (+)NCBI
Rnor_6.0184,413,060 - 84,451,223 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008759111   ⟹   XP_008757333
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2182,900,028 - 82,933,823 (+)NCBI
Rnor_6.0184,417,302 - 84,451,223 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039101465   ⟹   XP_038957393
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2182,889,068 - 82,933,823 (+)NCBI
RefSeq Acc Id: XM_039101467   ⟹   XP_038957395
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2182,887,465 - 82,933,823 (+)NCBI
RefSeq Acc Id: XM_039101469   ⟹   XP_038957397
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2182,877,228 - 82,933,823 (+)NCBI
RefSeq Acc Id: XM_039101472   ⟹   XP_038957400
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2182,900,366 - 82,933,823 (+)NCBI
RefSeq Acc Id: XM_039101473   ⟹   XP_038957401
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2182,884,658 - 82,933,823 (+)NCBI
RefSeq Acc Id: XM_039101474   ⟹   XP_038957402
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2182,883,520 - 82,933,828 (+)NCBI
RefSeq Acc Id: XM_039101475   ⟹   XP_038957403
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2182,900,940 - 82,933,828 (+)NCBI
Reference Sequences
RefSeq Acc Id: NP_058789   ⟸   NM_017093
- UniProtKB: P47197 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_008757331   ⟸   XM_008759109
- Peptide Label: isoform X2
- UniProtKB: Q3HSE5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008757330   ⟸   XM_008759108
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_008757332   ⟸   XM_008759110
- Peptide Label: isoform X2
- UniProtKB: Q3HSE5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008757333   ⟸   XM_008759111
- Peptide Label: isoform X2
- UniProtKB: Q3HSE5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000025303   ⟸   ENSRNOT00000025303
RefSeq Acc Id: XP_038957397   ⟸   XM_039101469
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038957402   ⟸   XM_039101474
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038957401   ⟸   XM_039101473
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038957395   ⟸   XM_039101467
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038957393   ⟸   XM_039101465
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038957400   ⟸   XM_039101472
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038957403   ⟸   XM_039101475
- Peptide Label: isoform X4
RefSeq Acc Id: ENSRNOP00000095075   ⟸   ENSRNOT00000118840
RefSeq Acc Id: ENSRNOP00000076786   ⟸   ENSRNOT00000100544
RefSeq Acc Id: ENSRNOP00000078809   ⟸   ENSRNOT00000105853
Protein Domains
AGC-kinase C-terminal   PH   Protein kinase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P47197-F1-model_v2 AlphaFold P47197 1-481 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13689857
Promoter ID:EPDNEW_R382
Type:single initiation site
Name:Akt2_1
Description:AKT serine/threonine kinase 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0184,411,683 - 84,411,743EPDNEW

Strain Variation

Strain Sequence Variants (MRatBN7.2)
ACI/EurMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
ACI/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN-Lx/CubMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN/NHsdMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN/NHsdMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN/SsN (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BUF/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BXH2/CubMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BXH3/CubMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
DA/OlaHsd (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Envigo
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/DuCrl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/NCrl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/Stm (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
FHH/EurMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
FXLE16/Stm (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
FXLE18/Stm (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
GK/FarMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB10/IpcvMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB2/IpcvMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB20/IpcvMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB31/IpcvMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB4/IpcvMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LE/Stm (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEW/Crl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF10A/StmMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF11/Stm (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF1A/Stm (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF1C/Stm (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF2B/Stm (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF3/Stm (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF4/Stm (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LH/MavRrrcAek (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Kwitek
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LL/MavRrrcAek (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Kwitek
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LN/MavRrrcAek (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Kwitek
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
M520/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
M520/NRrrcMcwi (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
MR/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
MWF/Hsd (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
PVG/Seac (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SHR/OlalpcvMcwi (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SHRSP/A3NCrl (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SR/JrHsd (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Envigo
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SS/JrHsdMcwi (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WAG/RijCrl (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WKY/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WKY/NCrl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WN/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:2082 AgrOrtholog
BioCyc Gene G2FUF-60302 BioCyc
Ensembl Genes ENSRNOG00000018677 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000025303 ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOP00000095075 ENTREZGENE
Ensembl Transcript ENSRNOT00000025303 ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOT00000118840 ENTREZGENE
Gene3D-CATH 2.30.29.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro AGC-kinase_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Akt2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH_PKB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pkinase_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:25233 UniProtKB/Swiss-Prot
NCBI Gene 25233 ENTREZGENE
Pfam PF00169 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pkinase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pkinase_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB AKT2 RGD
PhenoGen Akt2 PhenoGen
PROSITE AGC_KINASE_CTER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH_DOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_ATP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART S_TK_X UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  S_TKc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00233 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF56112 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt AKT2_RAT UniProtKB/Swiss-Prot, ENTREZGENE
  Q3HSE5 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-05-11 Akt2  AKT serine/threonine kinase 2  Akt2  v-akt murine thymoma viral oncogene homolog 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-09-26 Akt2  v-akt murine thymoma viral oncogene homolog 2  Akt2  thymoma viral proto-oncogene 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-11-17 Akt2  thymoma viral proto-oncogene 2    murine thymoma viral (v-akt) oncogene homolog 2  Name updated 1299863 APPROVED
2002-06-10 Akt2  Murine thymoma viral (v-akt) oncogene homolog 2      Symbol and Name status set to approved 70586 APPROVED

RGD Curation Notes
Note Type Note Reference
gene_domains contains a pleckstrin homology domain 632176
gene_domains contains a protein-serine/threonine kinase catalytic domain 632176
gene_expression expressed in testis and other tissues 632176
gene_function may act as a protein-serine/threonine kinase 632176
gene_physical_interaction may bind protein kinase C 632176
gene_process may play a role in the phosphatidylinositol 3-kinase (PI3-K) signaling pathway 632179
gene_protein protein sequence contains 481 amino acids 632176