Symbol:
Jph1
Name:
junctophilin 1
RGD ID:
1308789
Description:
Predicted to be a structural constituent of muscle. Predicted to act upstream of or within muscle organ development. Predicted to be located in Z disc; junctional sarcoplasmic reticulum membrane; and nucleoplasm. Predicted to be part of junctional membrane complex. Predicted to be active in endoplasmic reticulum membrane; plasma membrane; and sarcoplasmic reticulum. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease axonal type 2K. Orthologous to human JPH1 (junctophilin 1); INTERACTS WITH 2,6-dinitrotoluene; 6-propyl-2-thiouracil; aconitine.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
junctophilin-1; LOC297748
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
JPH1 (junctophilin 1) HGNC
Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):
Jph1 (junctophilin 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Jph1 (junctophilin 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
JPH1 (junctophilin 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
JPH1 (junctophilin 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Jph1 (junctophilin 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
JPH1 (junctophilin 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
JPH1 (junctophilin 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Jph1 (junctophilin 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Alliance orthologs 3
Homo sapiens (human):
JPH1 (junctophilin 1)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Mus musculus (house mouse):
Jph1 (junctophilin 1)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
jph1b (junctophilin 1b)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|SonicParanoid)
Danio rerio (zebrafish):
jph1a (junctophilin 1a)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Caenorhabditis elegans (roundworm):
jph-1
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Drosophila melanogaster (fruit fly):
jp
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):
jph1
Alliance
DIOPT (Ensembl Compara|OMA|OrthoFinder|PANTHER|PhylomeDB)
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 5 6,813,553 - 6,920,488 (+) NCBI GRCr8 mRatBN7.2 5 2,030,227 - 2,137,171 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 5 2,030,281 - 2,125,284 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 5 4,146,657 - 4,241,653 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 5 5,785,523 - 5,880,520 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 5 5,473,359 - 5,568,364 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 5 1,417,414 - 1,511,754 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 5 1,417,478 - 1,511,416 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 5 1,413,646 - 1,507,659 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 5 1,110,289 - 1,207,092 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 5 1,110,442 - 1,204,716 (+) NCBI Celera 5 1,665,186 - 1,760,181 (+) NCBI Celera Cytogenetic Map 5 q11 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Jph1 Rat 1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene multiple interactions ISO RGD:1318764 6480464 [2,4,4'-trichlorobiphenyl co-treated with 2,5,2',5'-tetrachlorobiphenyl co-treated with 2,4,5,2',5'-pentachlorobiphenyl co-treated with 2,2',3',4,4',5-hexachlorobiphenyl co-treated with 2,4,5,2',4',5'-hexachlorobiphenyl co-treated with more ... CTD PMID:25510870 Jph1 Rat 1,2-dimethylhydrazine decreases expression ISO RGD:1318764 6480464 1,2-Dimethylhydrazine results in decreased expression of JPH1 mRNA CTD PMID:22206623 Jph1 Rat 17beta-estradiol increases expression ISO RGD:1318763 6480464 Estradiol results in increased expression of JPH1 mRNA CTD PMID:23019147|PMID:31614463 Jph1 Rat 2,2',4,4',5,5'-hexachlorobiphenyl multiple interactions ISO RGD:1318764 6480464 [2,4,4'-trichlorobiphenyl co-treated with 2,5,2',5'-tetrachlorobiphenyl co-treated with 2,4,5,2',5'-pentachlorobiphenyl co-treated with 2,2',3',4,4',5-hexachlorobiphenyl co-treated with 2,4,5,2',4',5'-hexachlorobiphenyl co-treated with more ... CTD PMID:25510870 Jph1 Rat 2,2',5,5'-tetrachlorobiphenyl multiple interactions ISO RGD:1318764 6480464 [2,4,4'-trichlorobiphenyl co-treated with 2,5,2',5'-tetrachlorobiphenyl co-treated with 2,4,5,2',5'-pentachlorobiphenyl co-treated with 2,2',3',4,4',5-hexachlorobiphenyl co-treated with 2,4,5,2',4',5'-hexachlorobiphenyl co-treated with more ... CTD PMID:25510870 Jph1 Rat 2,3,7,8-tetrachlorodibenzodioxine decreases expression ISO RGD:1318764 6480464 Tetrachlorodibenzodioxin results in decreased expression of JPH1 mRNA CTD PMID:19933214 Jph1 Rat 2,3,7,8-tetrachlorodibenzodioxine multiple interactions ISO RGD:1318764 6480464 [Tetrachlorodibenzodioxin affects the methylation of JPH1 enhancer] which results in increased expression of JPH1 mRNA CTD PMID:33017471 Jph1 Rat 2,4,4'-trichlorobiphenyl multiple interactions ISO RGD:1318764 6480464 [2,4,4'-trichlorobiphenyl co-treated with 2,5,2',5'-tetrachlorobiphenyl co-treated with 2,4,5,2',5'-pentachlorobiphenyl co-treated with 2,2',3',4,4',5-hexachlorobiphenyl co-treated with 2,4,5,2',4',5'-hexachlorobiphenyl co-treated with more ... CTD PMID:25510870 Jph1 Rat 2,6-dinitrotoluene affects expression EXP 6480464 2,6-dinitrotoluene affects the expression of JPH1 mRNA CTD PMID:21346803 Jph1 Rat 3-methylcholanthrene multiple interactions ISO RGD:1318763 6480464 Methylcholanthrene promotes the reaction [AHR protein binds to JPH1 promoter] CTD PMID:20348232 Jph1 Rat 4,4'-sulfonyldiphenol increases expression ISO RGD:1318763 6480464 bisphenol S results in increased expression of JPH1 mRNA CTD PMID:25912373 Jph1 Rat 6-propyl-2-thiouracil decreases expression EXP 6480464 Propylthiouracil results in decreased expression of JPH1 mRNA CTD PMID:24780913|PMID:30047161 Jph1 Rat aconitine decreases expression EXP 6480464 Aconitine results in decreased expression of JPH1 protein CTD PMID:33236894 Jph1 Rat acrylamide decreases expression EXP 6480464 Acrylamide results in decreased expression of JPH1 mRNA CTD PMID:28959563 Jph1 Rat aflatoxin B1 decreases methylation ISO RGD:1318763 6480464 Aflatoxin B1 results in decreased methylation of JPH1 gene CTD PMID:27153756 Jph1 Rat all-trans-retinoic acid decreases expression ISO RGD:1318763 6480464 Tretinoin results in decreased expression of JPH1 mRNA CTD PMID:21934132 Jph1 Rat alpha-Zearalanol multiple interactions EXP 6480464 [Zeranol co-treated with perfluorooctanoic acid] results in decreased expression of JPH1 mRNA CTD PMID:35163327 Jph1 Rat alpha-Zearalanol decreases expression EXP 6480464 Zeranol results in decreased expression of JPH1 mRNA CTD PMID:35163327 Jph1 Rat amitrole decreases expression EXP 6480464 Amitrole results in decreased expression of JPH1 mRNA CTD PMID:30047161 Jph1 Rat aristolochic acid A decreases expression ISO RGD:1318763 6480464 aristolochic acid I results in decreased expression of JPH1 mRNA CTD PMID:33212167 Jph1 Rat arsane multiple interactions ISO RGD:1318763 6480464 [[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ... CTD PMID:32525701|PMID:39836092 Jph1 Rat arsenic atom multiple interactions ISO RGD:1318763 6480464 [[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ... CTD PMID:32525701|PMID:39836092 Jph1 Rat atrazine increases expression ISO RGD:1318763 6480464 Atrazine results in increased expression of JPH1 mRNA CTD PMID:22378314 Jph1 Rat benzo[a]pyrene decreases expression ISO RGD:1318763 6480464 Benzo(a)pyrene results in decreased expression of JPH1 mRNA CTD PMID:22316170 Jph1 Rat benzo[a]pyrene increases expression ISO RGD:1318763 6480464 Benzo(a)pyrene results in increased expression of JPH1 mRNA CTD PMID:32234424 Jph1 Rat benzo[a]pyrene decreases methylation ISO RGD:1318763 6480464 Benzo(a)pyrene results in decreased methylation of JPH1 promoter CTD PMID:27901495 Jph1 Rat beta-lapachone increases expression ISO RGD:1318763 6480464 beta-lapachone results in increased expression of JPH1 mRNA CTD PMID:38218311 Jph1 Rat bisphenol A affects expression EXP 6480464 bisphenol A affects the expression of JPH1 mRNA CTD PMID:25181051 Jph1 Rat bisphenol A decreases methylation ISO RGD:1318763 6480464 bisphenol A results in decreased methylation of JPH1 gene CTD PMID:31601247 Jph1 Rat bisphenol A decreases expression EXP 6480464 bisphenol A results in decreased expression of JPH1 mRNA CTD PMID:34947998 Jph1 Rat bisphenol A increases methylation EXP 6480464 bisphenol A results in increased methylation of JPH1 gene CTD PMID:28505145 Jph1 Rat bisphenol A increases expression ISO RGD:1318764 6480464 bisphenol A results in increased expression of JPH1 mRNA CTD PMID:25594700 Jph1 Rat bisphenol AF increases expression ISO RGD:1318763 6480464 bisphenol AF results in increased expression of JPH1 mRNA CTD PMID:25912373 Jph1 Rat bisphenol F increases expression ISO RGD:1318764 6480464 bisphenol F results in increased expression of JPH1 mRNA CTD PMID:38685157 Jph1 Rat butanal increases expression ISO RGD:1318763 6480464 butyraldehyde results in increased expression of JPH1 mRNA CTD PMID:26079696 Jph1 Rat C60 fullerene decreases expression EXP 6480464 fullerene C60 results in decreased expression of JPH1 mRNA CTD PMID:19167457 Jph1 Rat cadmium dichloride decreases expression ISO RGD:1318763 6480464 Cadmium Chloride results in decreased expression of JPH1 mRNA CTD PMID:38568856 Jph1 Rat cantharidin decreases expression ISO RGD:1318764 6480464 Cantharidin results in decreased expression of JPH1 mRNA CTD PMID:36907384 Jph1 Rat CGP 52608 multiple interactions ISO RGD:1318763 6480464 CGP 52608 promotes the reaction [RORA protein binds to JPH1 gene] CTD PMID:28238834 Jph1 Rat choline multiple interactions ISO RGD:1318764 6480464 [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in decreased methylation more ... CTD PMID:20938992 Jph1 Rat cisplatin increases expression ISO RGD:1318763 6480464 Cisplatin results in increased expression of JPH1 mRNA CTD PMID:27594783 Jph1 Rat copper atom multiple interactions ISO RGD:1318763 6480464 [NSC 689534 binds to Copper] which results in decreased expression of JPH1 mRNA CTD PMID:20971185 Jph1 Rat copper(0) multiple interactions ISO RGD:1318763 6480464 [NSC 689534 binds to Copper] which results in decreased expression of JPH1 mRNA CTD PMID:20971185 Jph1 Rat coumarin affects phosphorylation ISO RGD:1318763 6480464 coumarin affects the phosphorylation of JPH1 protein CTD PMID:35688186 Jph1 Rat Cuprizon increases expression EXP 6480464 Cuprizone results in increased expression of JPH1 mRNA CTD PMID:27523638 Jph1 Rat cyclosporin A increases expression ISO RGD:1318763 6480464 Cyclosporine results in increased expression of JPH1 mRNA CTD PMID:20106945 Jph1 Rat dorsomorphin multiple interactions ISO RGD:1318763 6480464 [NOG protein co-treated with Valproic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased more ... CTD PMID:27188386 Jph1 Rat doxorubicin decreases expression ISO RGD:1318763 6480464 Doxorubicin results in decreased expression of JPH1 mRNA CTD PMID:29803840 Jph1 Rat endosulfan increases expression EXP 6480464 Endosulfan results in increased expression of JPH1 mRNA CTD PMID:29391264 Jph1 Rat ethanol affects splicing ISO RGD:1318764 6480464 Ethanol affects the splicing of JPH1 mRNA CTD PMID:30319688 Jph1 Rat folic acid multiple interactions ISO RGD:1318764 6480464 [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in decreased methylation more ... CTD PMID:20938992 Jph1 Rat FR900359 affects phosphorylation ISO RGD:1318763 6480464 FR900359 affects the phosphorylation of JPH1 protein CTD PMID:37730182 Jph1 Rat genistein decreases expression ISO RGD:1318764 6480464 Genistein results in decreased expression of JPH1 mRNA CTD PMID:32186404 Jph1 Rat inulin multiple interactions ISO RGD:1318764 6480464 [perfluorooctane sulfonic acid co-treated with Inulin] results in increased expression of JPH1 mRNA CTD PMID:36331819 Jph1 Rat L-methionine multiple interactions ISO RGD:1318764 6480464 [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in decreased methylation more ... CTD PMID:20938992 Jph1 Rat manganese atom multiple interactions ISO RGD:1318763 6480464 [[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ... CTD PMID:39836092 Jph1 Rat manganese(0) multiple interactions ISO RGD:1318763 6480464 [[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ... CTD PMID:39836092 Jph1 Rat manganese(II) chloride multiple interactions ISO RGD:1318763 6480464 [[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ... CTD PMID:39836092 Jph1 Rat methimazole decreases expression EXP 6480464 Methimazole results in decreased expression of JPH1 mRNA CTD PMID:30047161 Jph1 Rat methylmercury chloride increases expression ISO RGD:1318763 6480464 methylmercuric chloride results in increased expression of JPH1 mRNA CTD PMID:23179753 Jph1 Rat okadaic acid increases expression ISO RGD:1318763 6480464 Okadaic Acid results in increased expression of JPH1 mRNA CTD PMID:38832940 Jph1 Rat paracetamol increases expression ISO RGD:1318763 6480464 Acetaminophen results in increased expression of JPH1 mRNA CTD PMID:29067470 Jph1 Rat PCB138 multiple interactions ISO RGD:1318764 6480464 [2,4,4'-trichlorobiphenyl co-treated with 2,5,2',5'-tetrachlorobiphenyl co-treated with 2,4,5,2',5'-pentachlorobiphenyl co-treated with 2,2',3',4,4',5-hexachlorobiphenyl co-treated with 2,4,5,2',4',5'-hexachlorobiphenyl co-treated with more ... CTD PMID:25510870 Jph1 Rat perfluorononanoic acid increases expression ISO RGD:1318763 6480464 perfluoro-n-nonanoic acid results in increased expression of JPH1 mRNA CTD PMID:32588087 Jph1 Rat perfluorooctane-1-sulfonic acid multiple interactions ISO RGD:1318764 6480464 [perfluorooctane sulfonic acid co-treated with Inulin] results in increased expression of JPH1 mRNA CTD PMID:36331819 Jph1 Rat perfluorooctanoic acid multiple interactions EXP 6480464 [Zeranol co-treated with perfluorooctanoic acid] results in decreased expression of JPH1 mRNA CTD PMID:35163327 Jph1 Rat potassium chromate increases expression ISO RGD:1318763 6480464 potassium chromate(VI) results in increased expression of JPH1 mRNA CTD PMID:22714537 Jph1 Rat potassium dichromate increases expression ISO RGD:1318764 6480464 Potassium Dichromate results in increased expression of JPH1 mRNA CTD PMID:23608068 Jph1 Rat SB 431542 multiple interactions ISO RGD:1318763 6480464 [NOG protein co-treated with Valproic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased more ... CTD PMID:27188386 Jph1 Rat sodium arsenate multiple interactions ISO RGD:1318763 6480464 [sodium arsenate results in increased abundance of Arsenic] which results in increased expression of JPH1 more ... CTD PMID:32525701 Jph1 Rat sodium arsenite multiple interactions ISO RGD:1318763 6480464 [[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ... CTD PMID:39836092 Jph1 Rat sulfadimethoxine decreases expression EXP 6480464 Sulfadimethoxine results in decreased expression of JPH1 mRNA CTD PMID:30047161 Jph1 Rat titanium dioxide increases methylation ISO RGD:1318764 6480464 titanium dioxide results in increased methylation of JPH1 gene CTD PMID:35295148 Jph1 Rat trichostatin A increases expression ISO RGD:1318763 6480464 trichostatin A results in increased expression of JPH1 mRNA CTD PMID:24935251 Jph1 Rat trimellitic anhydride decreases expression ISO RGD:1318764 6480464 trimellitic anhydride results in decreased expression of JPH1 mRNA CTD PMID:19042947 Jph1 Rat Triptolide decreases expression ISO RGD:1318764 6480464 triptolide results in decreased expression of JPH1 mRNA CTD PMID:32835833 Jph1 Rat triptonide decreases expression ISO RGD:1318764 6480464 triptonide results in decreased expression of JPH1 mRNA CTD PMID:33045310 Jph1 Rat valproic acid affects expression ISO RGD:1318763 6480464 Valproic Acid affects the expression of JPH1 mRNA CTD PMID:25979313 Jph1 Rat valproic acid increases expression ISO RGD:1318763 6480464 Valproic Acid results in increased expression of JPH1 mRNA CTD PMID:23179753|PMID:24383497|PMID:26272509|PMID:28001369|PMID:29154799 Jph1 Rat valproic acid multiple interactions ISO RGD:1318763 6480464 [NOG protein co-treated with Valproic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased more ... CTD PMID:27188386 Jph1 Rat vorinostat multiple interactions ISO RGD:1318763 6480464 [NOG protein co-treated with Vorinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression more ... CTD PMID:27188386
1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO) 1,2-dimethylhydrazine (ISO) 17beta-estradiol (ISO) 2,2',4,4',5,5'-hexachlorobiphenyl (ISO) 2,2',5,5'-tetrachlorobiphenyl (ISO) 2,3,7,8-tetrachlorodibenzodioxine (ISO) 2,4,4'-trichlorobiphenyl (ISO) 2,6-dinitrotoluene (EXP) 3-methylcholanthrene (ISO) 4,4'-sulfonyldiphenol (ISO) 6-propyl-2-thiouracil (EXP) aconitine (EXP) acrylamide (EXP) aflatoxin B1 (ISO) all-trans-retinoic acid (ISO) alpha-Zearalanol (EXP) amitrole (EXP) aristolochic acid A (ISO) arsane (ISO) arsenic atom (ISO) atrazine (ISO) benzo[a]pyrene (ISO) beta-lapachone (ISO) bisphenol A (EXP,ISO) bisphenol AF (ISO) bisphenol F (ISO) butanal (ISO) C60 fullerene (EXP) cadmium dichloride (ISO) cantharidin (ISO) CGP 52608 (ISO) choline (ISO) cisplatin (ISO) copper atom (ISO) copper(0) (ISO) coumarin (ISO) Cuprizon (EXP) cyclosporin A (ISO) dorsomorphin (ISO) doxorubicin (ISO) endosulfan (EXP) ethanol (ISO) folic acid (ISO) FR900359 (ISO) genistein (ISO) inulin (ISO) L-methionine (ISO) manganese atom (ISO) manganese(0) (ISO) manganese(II) chloride (ISO) methimazole (EXP) methylmercury chloride (ISO) okadaic acid (ISO) paracetamol (ISO) PCB138 (ISO) perfluorononanoic acid (ISO) perfluorooctane-1-sulfonic acid (ISO) perfluorooctanoic acid (EXP) potassium chromate (ISO) potassium dichromate (ISO) SB 431542 (ISO) sodium arsenate (ISO) sodium arsenite (ISO) sulfadimethoxine (EXP) titanium dioxide (ISO) trichostatin A (ISO) trimellitic anhydride (ISO) Triptolide (ISO) triptonide (ISO) valproic acid (ISO) vorinostat (ISO)
Cellular Component
endoplasmic reticulum (IEA,ISO) endoplasmic reticulum membrane (IBA,IEA,ISO) junctional membrane complex (IBA,IEA,ISO) junctional sarcoplasmic reticulum membrane (IEA,ISO) membrane (IEA) nucleoplasm (IEA,ISO) plasma membrane (IBA,IEA,ISO) sarcoplasmic reticulum (IBA,IEA,ISO) Z disc (IEA,ISO)
Jph1 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 5 6,813,553 - 6,920,488 (+) NCBI GRCr8 mRatBN7.2 5 2,030,227 - 2,137,171 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 5 2,030,281 - 2,125,284 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 5 4,146,657 - 4,241,653 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 5 5,785,523 - 5,880,520 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 5 5,473,359 - 5,568,364 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 5 1,417,414 - 1,511,754 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 5 1,417,478 - 1,511,416 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 5 1,413,646 - 1,507,659 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 5 1,110,289 - 1,207,092 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 5 1,110,442 - 1,204,716 (+) NCBI Celera 5 1,665,186 - 1,760,181 (+) NCBI Celera Cytogenetic Map 5 q11 NCBI
JPH1 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 8 74,234,700 - 74,321,540 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 8 74,234,700 - 74,321,540 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 8 75,146,935 - 75,233,775 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 8 75,309,493 - 75,396,117 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 8 75,311,996 - 75,396,117 NCBI Celera 8 71,144,786 - 71,231,414 (-) NCBI Celera Cytogenetic Map 8 q21.11 NCBI HuRef 8 70,637,846 - 70,724,493 (-) NCBI HuRef CHM1_1 8 75,198,909 - 75,285,541 (-) NCBI CHM1_1 T2T-CHM13v2.0 8 74,663,960 - 74,750,834 (-) NCBI T2T-CHM13v2.0
Jph1 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 1 17,012,328 - 17,168,132 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 1 17,034,784 - 17,168,113 (-) Ensembl GRCm39 Ensembl GRCm38 1 16,942,104 - 17,097,922 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 1 16,964,560 - 17,097,889 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 1 16,987,545 - 17,087,879 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 1 16,982,678 - 17,083,012 (-) NCBI MGSCv36 mm8 Celera 1 16,921,250 - 17,021,597 (-) NCBI Celera Cytogenetic Map 1 A3 NCBI cM Map 1 5.17 NCBI
Jph1 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955444 6,108,312 - 6,176,814 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955444 6,108,312 - 6,176,430 (+) NCBI ChiLan1.0 ChiLan1.0
JPH1 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 7 89,977,880 - 90,064,163 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 8 65,605,684 - 65,691,948 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 8 70,768,560 - 70,855,068 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 8 72,413,794 - 72,500,252 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 8 72,413,794 - 72,505,309 (-) Ensembl panpan1.1 panPan2
JPH1 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 29 22,701,531 - 22,785,712 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 29 22,703,647 - 22,785,415 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 29 22,966,671 - 23,050,394 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 29 22,813,226 - 22,897,018 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 29 22,815,346 - 22,897,353 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 29 22,872,083 - 22,956,225 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 29 22,907,073 - 22,990,897 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 29 23,190,302 - 23,274,157 (-) NCBI UU_Cfam_GSD_1.0
Jph1
JPH1 Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 4 61,628,299 - 61,716,544 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 4 61,628,304 - 61,716,550 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 4 67,369,034 - 67,423,314 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
JPH1 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 8 69,839,696 - 69,919,915 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 8 69,839,460 - 69,919,950 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666039 71,452,965 - 71,533,094 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Jph1
.
Predicted Target Of
Count of predictions: 23 Count of miRNA genes: 22 Interacting mature miRNAs: 23 Transcripts: ENSRNOT00000008153 Prediction methods: Miranda, Rnahybrid Result types: miRGate_prediction
70212 Niddm25 Non-insulin dependent diabetes mellitus QTL 25 3.54 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 5 1 131345958 Rat 1331756 Rf34 Renal function QTL 34 4.16275 kidney blood vessel physiology trait (VT:0100012) absolute change in renal blood flow rate (CMO:0001168) 5 1 90450412 Rat 1331771 Rf35 Renal function QTL 35 4.36965 kidney blood vessel physiology trait (VT:0100012) absolute change in renal blood flow rate (CMO:0001168) 5 729470 86724018 Rat
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
49
113
78
77
46
24
46
6
204
96
93
45
58
31
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Ensembl Acc Id:
ENSRNOT00000008153 ⟹ ENSRNOP00000008153
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 5 2,030,281 - 2,125,284 (+) Ensembl Rnor_6.0 Ensembl 5 1,417,478 - 1,511,416 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000085564 ⟹ ENSRNOP00000075672
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source Rnor_6.0 Ensembl 5 1,417,505 - 1,509,052 (+) Ensembl
RefSeq Acc Id:
NM_001106630 ⟹ NP_001100100
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 5 6,813,603 - 6,908,601 (+) NCBI mRatBN7.2 5 2,030,281 - 2,125,284 (+) NCBI Rnor_6.0 5 1,417,478 - 1,511,416 (+) NCBI Rnor_5.0 5 1,413,646 - 1,507,659 (+) NCBI RGSC_v3.4 5 1,110,289 - 1,207,092 (+) RGD Celera 5 1,665,186 - 1,760,181 (+) RGD
Sequence:
GGAGGTGGTGGCGACCGCGAGAGAGGAGGGGAGGACGGGGGCAGCGTCGGACTGGAGCCGATCGGCGGTGCGAGCTGCCCGGGGCGCAGTCGTGAGCTCGCCCGCTGGGTCCCCACCCACGAGCTACA
hide sequence
RefSeq Acc Id:
XM_006237719 ⟹ XP_006237781
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 5 6,813,553 - 6,906,241 (+) NCBI mRatBN7.2 5 2,030,227 - 2,122,924 (+) NCBI Rnor_6.0 5 1,417,414 - 1,509,056 (+) NCBI Rnor_5.0 5 1,413,646 - 1,507,659 (+) NCBI
Sequence:
GCTCCGGAGACTGGGCTGTCCTCTCTCGCGGCGCTGGCCCGGGCGGCGGCGGAGGAGGGAGAGA
hide sequence
RefSeq Acc Id:
XM_006237720 ⟹ XP_006237782
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 5 6,813,553 - 6,906,241 (+) NCBI mRatBN7.2 5 2,030,227 - 2,122,924 (+) NCBI Rnor_6.0 5 1,417,414 - 1,509,056 (+) NCBI Rnor_5.0 5 1,413,646 - 1,507,659 (+) NCBI
Sequence:
GCTCCGGAGACTGGGCTGTCCTCTCTCGCGGCGCTGGCCCGGGCGGCGGCGGAGGAGGGAGAGA
hide sequence
RefSeq Acc Id:
XM_006237721 ⟹ XP_006237783
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 5 6,813,553 - 6,906,241 (+) NCBI mRatBN7.2 5 2,030,227 - 2,122,924 (+) NCBI Rnor_6.0 5 1,417,414 - 1,509,056 (+) NCBI Rnor_5.0 5 1,413,646 - 1,507,659 (+) NCBI
Sequence:
GCTCCGGAGACTGGGCTGTCCTCTCTCGCGGCGCTGGCCCGGGCGGCGGCGGAGGAGGGAGAGAGGAGGTGGTGGCGACCGCGAGAGAGGAGGGGAGGACGGGGGCAGCGTCGGACTGGAGCCGATCG
hide sequence
RefSeq Acc Id:
XM_006237722 ⟹ XP_006237784
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 5 6,813,553 - 6,906,241 (+) NCBI mRatBN7.2 5 2,030,227 - 2,122,924 (+) NCBI Rnor_6.0 5 1,417,414 - 1,509,056 (+) NCBI Rnor_5.0 5 1,413,646 - 1,507,659 (+) NCBI
Sequence:
GCTCCGGAGACTGGGCTGTCCTCTCTCGCGGCGCTGGCCCGGGCGGCGGCGGAGGAGGGAGAGA
hide sequence
RefSeq Acc Id:
XM_006237723 ⟹ XP_006237785
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 5 6,813,553 - 6,920,488 (+) NCBI mRatBN7.2 5 2,030,227 - 2,127,319 (+) NCBI Rnor_6.0 5 1,417,414 - 1,511,754 (+) NCBI Rnor_5.0 5 1,413,646 - 1,507,659 (+) NCBI
Sequence:
GCTCCGGAGACTGGGCTGTCCTCTCTCGCGGCGCTGGCCCGGGCGGCGGCGGAGGAGGGAGAGA
hide sequence
RefSeq Acc Id:
XM_039109388 ⟹ XP_038965316
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 5 6,813,553 - 6,906,241 (+) NCBI mRatBN7.2 5 2,030,227 - 2,122,924 (+) NCBI
RefSeq Acc Id:
NP_001100100 ⟸ NM_001106630
- UniProtKB:
D3ZQ55 (UniProtKB/TrEMBL), A6JF93 (UniProtKB/TrEMBL)
- Sequence:
MTGGRFDFDDGGTYCGGWEEGKAHGHGICTGPKGQGEYSGSWSHGFEVVGGYTWPSGNTYQGYWAQGKRHGLGVETKGKWMYRGEWSHGFKGRYGVRQSLCTPARYEGTWSNGLQDGYGVETYGDGGT
hide sequence
RefSeq Acc Id:
XP_006237785 ⟸ XM_006237723
- Peptide Label:
isoform X1
- UniProtKB:
D3ZQ55 (UniProtKB/TrEMBL), A6JF93 (UniProtKB/TrEMBL)
- Sequence:
MTGGRFDFDDGGTYCGGWEEGKAHGHGICTGPKGQGEYSGSWSHGFEVVGGYTWPSGNTYQGYW
hide sequence
RefSeq Acc Id:
XP_006237781 ⟸ XM_006237719
- Peptide Label:
isoform X1
- UniProtKB:
D3ZQ55 (UniProtKB/TrEMBL), A6JF93 (UniProtKB/TrEMBL)
- Sequence:
MTGGRFDFDDGGTYCGGWEEGKAHGHGICTGPKGQGEYSGSWSHGFEVVGGYTWPSGNTYQGYWAQGKRHGLGVETKGKWMYRGEWSHGFKGRYGVRQSLCTPARYEGTWSNGLQDGYGVETYGDGGT
hide sequence
RefSeq Acc Id:
XP_006237783 ⟸ XM_006237721
- Peptide Label:
isoform X1
- UniProtKB:
D3ZQ55 (UniProtKB/TrEMBL), A6JF93 (UniProtKB/TrEMBL)
- Sequence:
MTGGRFDFDDGGTYCGGWEEGKAHGHGICTGPKGQGEYSGSWSHGFEVVGGYTWPSGNTYQGYW
hide sequence
RefSeq Acc Id:
XP_006237782 ⟸ XM_006237720
- Peptide Label:
isoform X1
- UniProtKB:
D3ZQ55 (UniProtKB/TrEMBL), A6JF93 (UniProtKB/TrEMBL)
- Sequence:
MTGGRFDFDDGGTYCGGWEEGKAHGHGICTGPKGQGEYSGSWSHGFEVVGGYTWPSGNTYQGYWAQGKRHGLGVETKGKWMYRGEWSHGFKGRYGVRQSLCTPARYEGTWSNGLQDGYGVETYGDGGT
hide sequence
RefSeq Acc Id:
XP_006237784 ⟸ XM_006237722
- Peptide Label:
isoform X1
- UniProtKB:
D3ZQ55 (UniProtKB/TrEMBL), A6JF93 (UniProtKB/TrEMBL)
- Sequence:
MTGGRFDFDDGGTYCGGWEEGKAHGHGICTGPKGQGEYSGSWSHGFEVVGGYTWPSGNTYQGYW
hide sequence
Ensembl Acc Id:
ENSRNOP00000008153 ⟸ ENSRNOT00000008153
Ensembl Acc Id:
ENSRNOP00000075672 ⟸ ENSRNOT00000085564
RefSeq Acc Id:
XP_038965316 ⟸ XM_039109388
- Peptide Label:
isoform X1
- UniProtKB:
D3ZQ55 (UniProtKB/TrEMBL), A6JF93 (UniProtKB/TrEMBL)
RGD ID: 13693521 Promoter ID: EPDNEW_R4045 Type: single initiation site Name: Jph1_1 Description: junctophilin 1 SO ACC ID: SO:0000170 Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ ) Experiment Methods: Single-end sequencing. Position: Rat Assembly Chr Position (strand) Source Rnor_6.0 5 1,417,434 - 1,417,494 EPDNEW
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2008-04-30
Jph1
junctophilin 1
Jph1_predicted
junctophilin 1 (predicted)
'predicted' is removed
2292626 APPROVED
2005-01-12
Jph1_predicted
junctophilin 1 (predicted)
Symbol and Name status set to approved
70820 APPROVED
