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Gene: Jph1 (junctophilin 1) Rattus norvegicus
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Symbol: Jph1
Name: junctophilin 1
Description: Predicted to have calcium-release channel activity. Predicted to be involved in muscle organ development. Predicted to localize to several cellular components, including the Z disc; junctional membrane complex; and junctional sarcoplasmic reticulum membrane. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease axonal type 2K. Orthologous to human JPH1 (junctophilin 1); INTERACTS WITH 2,6-dinitrotoluene; 6-propyl-2-thiouracil; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: junctophilin-1; LOC297748
Orthologs:
Homo sapiens (human) : JPH1 (junctophilin 1)  HGNC  Alliance
Mus musculus (house mouse) : Jph1 (junctophilin 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Jph1 (junctophilin 1)
Pan paniscus (bonobo/pygmy chimpanzee) : JPH1 (junctophilin 1)
Canis lupus familiaris (dog) : JPH1 (junctophilin 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Jph1 (junctophilin 1)
Sus scrofa (pig) : JPH1 (junctophilin 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.051,417,414 - 1,511,754 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl51,417,478 - 1,511,416 (+)Ensembl
Rnor_5.051,413,646 - 1,507,659 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.451,110,289 - 1,207,092 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.151,110,442 - 1,204,716 (+)NCBI
Celera51,665,186 - 1,760,181 (+)NCBICelera
Cytogenetic Map5q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Jph1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1308789
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.