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ONTOLOGY REPORT - ANNOTATIONS

Term:establishment of vesicle localization
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Accession:GO:0051650 term browser browse the term
Definition:The directed movement of a vesicle to a specific location.
Synonyms:exact_synonym: establishment of vesicle localisation

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establishment of vesicle localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ikbkg inhibitor of nuclear factor kappa B kinase regulatory subunit gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936809:1,280,254...1,306,964
Ensembl chrNW_004936809:1,257,654...1,301,813 		JBrowse link
G Limk2 LIM domain kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936755:374,279...443,255
Ensembl chrNW_004936755:374,235...443,223 		JBrowse link
G Rab11a RAB11A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:26,089,216...26,111,245
Ensembl chrNW_004936471:26,088,852...26,113,433 		JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in
acts_upstream_of_or_within_positive_effect		 IEA
ISO		 (PMID:29712939) Ensembl
MGI		 PMID:29712939 GO_REF:0000107 NCBI chrNW_004936798:297,600...304,929
Ensembl chrNW_004936798:296,066...305,176 		JBrowse link
G Snapin SNAP associated protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20920792) Ensembl
MGI		 PMID:20920792 GO_REF:0000107 NCBI chrNW_004936580:3,449,585...3,464,709
Ensembl chrNW_004936580:3,462,987...3,464,214 		JBrowse link
G Syt11 synaptotagmin 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:5,123,196...5,142,976
Ensembl chrNW_004936580:5,129,865...5,142,885 		JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29712939) Ensembl
MGI		 PMID:29712939 GO_REF:0000107 NCBI chrNW_004936599:2,070,211...2,079,169
Ensembl chrNW_004936599:2,066,847...2,079,206 		JBrowse link
G Tesk1 testis associated actin remodelling kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:3,615,933...3,620,384
Ensembl chrNW_004936524:3,615,927...3,621,474 		JBrowse link
anterograde neuronal dense core vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif1a kinesin family member 1A involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chrNW_004936745:911,651...976,878
Ensembl chrNW_004936745:911,709...974,199 		JBrowse link
G Kif1b kinesin family member 1B involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chrNW_004936623:4,091,093...4,222,510
Ensembl chrNW_004936623:4,091,190...4,218,251 		JBrowse link
G Kif1c kinesin family member 1C involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chrNW_004936677:2,696,385...2,720,959
Ensembl chrNW_004936677:2,696,209...2,720,959 		JBrowse link
G Sybu syntabulin ISO RGD PMID:17611281 RGD:13217407 NCBI chrNW_004936470:35,332,243...35,439,095
Ensembl chrNW_004936470:35,332,452...35,438,204 		JBrowse link
anterograde synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor related protein complex 3 subunit beta 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936549:5,964,240...6,205,245
Ensembl chrNW_004936549:5,965,143...6,204,379 		JBrowse link
G Ap3b2 adaptor related protein complex 3 subunit beta 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936483:17,301,969...17,336,962
Ensembl chrNW_004936483:17,298,291...17,337,578 		JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936588:1,223,646...1,262,577
Ensembl chrNW_004936588:1,222,466...1,262,676 		JBrowse link
G Ap3m1 adaptor related protein complex 3 subunit mu 1 involved_in ISO (MGI:5437407|PMID:21998198) UniProt PMID:21998198 MGI:5437407 NCBI chrNW_004936521:5,023,896...5,050,822 JBrowse link
G Ap3m2 adaptor related protein complex 3 subunit mu 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936785:503,615...525,361
Ensembl chrNW_004936785:508,848...525,391 		JBrowse link
G Ap3s1 adaptor related protein complex 3 subunit sigma 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936742:1,007,684...1,088,272
Ensembl chrNW_004936742:1,007,973...1,088,394 		JBrowse link
G Ap3s2 adaptor related protein complex 3 subunit sigma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:15,613,474...15,660,862
Ensembl chrNW_004936483:15,613,474...15,660,838 		JBrowse link
G Bloc1s1 biogenesis of lysosomal organelles complex 1 subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:186,422...190,870
Ensembl chrNW_004936646:186,031...190,915 		JBrowse link
G Bloc1s2 biogenesis of lysosomal organelles complex 1 subunit 2 involved_in ISO (MGI:5437407|PMID:21998198) UniProt PMID:21998198 MGI:5437407 NCBI chrNW_004939661:2,128...6,384 JBrowse link
G Bloc1s3 biogenesis of lysosomal organelles complex 1 subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936706:1,702,154...1,704,366
Ensembl chrNW_004936706:1,684,824...1,706,544 		JBrowse link
G Bloc1s4 biogenesis of lysosomal organelles complex 1 subunit 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:18,618,330...18,619,512
Ensembl chrNW_004936477:18,618,499...18,619,140 		JBrowse link
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936534:4,550,592...4,584,482
Ensembl chrNW_004936534:4,550,592...4,584,482 		JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:8,209,091...8,226,249
Ensembl chrNW_004936471:8,209,057...8,226,353 		JBrowse link
G Dtnbp1 dystrobrevin binding protein 1 involved_in ISO (MGI:5437407|PMID:21998198) UniProt PMID:21998198 MGI:5437407 NCBI chrNW_004936552:1,787,687...1,926,516 JBrowse link
G Kif1a kinesin family member 1A involved_in ISO (PMID:7539720) SynGO PMID:7539720 NCBI chrNW_004936745:911,651...976,878
Ensembl chrNW_004936745:911,709...974,199 		JBrowse link
G Madd MAP kinase activating death domain involved_in ISO (PMID:18849981) SynGO PMID:18849981 NCBI chrNW_004936562:1,891,120...1,936,559
Ensembl chrNW_004936562:1,892,033...1,932,418 		JBrowse link
G Snapin SNAP associated protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:3,449,585...3,464,709
Ensembl chrNW_004936580:3,462,987...3,464,214 		JBrowse link
G Trim46 tripartite motif containing 46 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26671463) Ensembl
MGI
TreeGrafter		 PMID:26671463 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936580:4,678,855...4,690,222
Ensembl chrNW_004936580:4,678,827...4,690,236 		JBrowse link
clathrin-dependent extracellular exosome endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itga4 integrin subunit alpha 4 ISO RGD PMID:20124479 RGD:9698434 NCBI chrNW_004936509:10,215,283...10,293,653
Ensembl chrNW_004936509:10,215,283...10,292,252 		JBrowse link
COPI coating of Golgi vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arfgap2 ADP ribosylation factor GTPase activating protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936562:1,996,000...2,005,850
Ensembl chrNW_004936562:1,996,000...2,006,554 		JBrowse link
G Arfgap3 ADP ribosylation factor GTPase activating protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936718:674,177...714,204
Ensembl chrNW_004936718:674,033...714,228 		JBrowse link
G Gbf1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 involved_in ISO (PMID:12047556), (PMID:17956946) UniProt PMID:12047556 PMID:17956946 NCBI chrNW_004936600:3,479,045...3,604,241
Ensembl chrNW_004936600:3,479,048...3,604,241 		JBrowse link
G LOC101975870 transmembrane emp24 domain-containing protein 9-like involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004938757:5,310...6,697
Ensembl chrNW_004938757:5,267...6,826 		JBrowse link
COPI-coated vesicle budding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tmed10 transmembrane p24 trafficking protein 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:4,265,731...4,303,895 JBrowse link
COPII vesicle coating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cul3 cullin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936569:6,067,230...6,131,467
Ensembl chrNW_004936569:6,065,367...6,132,316 		JBrowse link
G Klhl12 kelch like family member 12 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936567:1,681,421...1,714,150
Ensembl chrNW_004936567:1,680,286...1,716,235 		JBrowse link
G Pdcd6 programmed cell death 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936815:1,129,367...1,144,020
Ensembl chrNW_004936815:1,129,352...1,143,992 		JBrowse link
G Pef1 penta-EF-hand domain containing 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:14,745,812...14,761,279
Ensembl chrNW_004936474:14,745,677...14,761,395 		JBrowse link
G Preb prolactin regulatory element binding involved_in ISO PMID:11422940 UniProt PMID:11422940 RGD:11344947 NCBI chrNW_004936493:5,416,302...5,420,138
Ensembl chrNW_004936493:5,415,971...5,420,138 		JBrowse link
G Sar1a secretion associated Ras related GTPase 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:8,422,511...8,439,945
Ensembl chrNW_004936521:8,422,446...8,441,333 		JBrowse link
G Sar1b secretion associated Ras related GTPase 1B involved_in ISO (PMID:32358066)
(PMID:23433038)		 UniProt PMID:23433038 PMID:32358066 NCBI chrNW_004936647:697,930...723,577 JBrowse link
G Sec16a SEC16 homolog A, endoplasmic reticulum export factor involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936669:1,344,019...1,375,483
Ensembl chrNW_004936669:1,343,879...1,375,508 		JBrowse link
G Sec16b SEC16 homolog B, endoplasmic reticulum export factor involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936481:10,782,988...10,821,204
Ensembl chrNW_004936481:10,783,054...10,821,206 		JBrowse link
G Tfg trafficking from ER to golgi regulator involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936630:2,518,944...2,555,054
Ensembl chrNW_004936630:2,515,822...2,555,299 		JBrowse link
dense core granule cytoskeletal transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif1a kinesin family member 1A involved_in ISO PMID:30021165
PMID:29166604		 UniProt PMID:29166604 PMID:30021165 RGD:14995321 RGD:15023486 NCBI chrNW_004936745:911,651...976,878
Ensembl chrNW_004936745:911,709...974,199 		JBrowse link
G Ppfia2 PTPRF interacting protein alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936698:2,090,768...2,531,366
Ensembl chrNW_004936698:2,094,374...2,531,465 		JBrowse link
G Syt4 synaptotagmin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936517:3,035,840...3,044,065
Ensembl chrNW_004936517:3,035,521...3,047,964 		JBrowse link
G Tanc2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 involved_in ISO PMID:30021165 UniProt PMID:30021165 RGD:14995321 NCBI chrNW_004936541:3,702,743...4,115,009
Ensembl chrNW_004936541:3,744,687...4,115,007 		JBrowse link
dense core granule docking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Unc13a unc-13 homolog A NOT|involved_in ISO (MGI:5819330|PMID:26575293) SynGO-UCL PMID:26575293 MGI:5819330 NCBI chrNW_004936596:3,311,358...3,370,833
Ensembl chrNW_004936596:3,312,788...3,368,916 		JBrowse link
G Unc13b unc-13 homolog B NOT|involved_in ISO (MGI:5819330|PMID:26575293) SynGO-UCL PMID:26575293 MGI:5819330 NCBI chrNW_004936524:3,320,859...3,369,865 JBrowse link
dense core granule exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cadps calcium dependent secretion activator involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936637:3,543,615...4,023,710
Ensembl chrNW_004936637:3,545,211...4,022,630 		JBrowse link
G Cadps2 calcium dependent secretion activator 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936605:2,505,064...3,012,322
Ensembl chrNW_004936605:2,505,231...3,011,468 		JBrowse link
dense core granule priming term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Unc13a unc-13 homolog A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936596:3,311,358...3,370,833
Ensembl chrNW_004936596:3,312,788...3,368,916 		JBrowse link
G Unc13b unc-13 homolog B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936524:3,320,859...3,369,865 JBrowse link
G Unc13c unc-13 homolog C involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936471:15,691,357...16,225,590
Ensembl chrNW_004936471:15,691,647...16,224,147 		JBrowse link
G Unc13d unc-13 homolog D involved_in ISO PMID:26575293 SynGO-UCL PMID:26575293 RGD:12050107 NCBI chrNW_004936594:1,008,215...1,023,023
Ensembl chrNW_004936594:1,008,327...1,021,878 		JBrowse link
establishment of melanosome localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab17 RAB17, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936525:748,851...765,636
Ensembl chrNW_004936525:748,600...765,642 		JBrowse link
exosomal secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cops5 COP9 signalosome subunit 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:7,035,973...7,050,538
Ensembl chrNW_004936496:7,035,924...7,050,786 		JBrowse link
G LOC101970059 uncharacterized LOC101970059 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:752,572...809,127
Ensembl chrNW_004936528:752,694...808,888 		JBrowse link
G Rab11a RAB11A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:26,089,216...26,111,245
Ensembl chrNW_004936471:26,088,852...26,113,433 		JBrowse link
G Rab27a RAB27A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:16,738,204...16,815,561
Ensembl chrNW_004936471:16,738,230...16,815,943 		JBrowse link
G Steap3 STEAP3 metalloreductase acts_upstream_of_or_within ISO (PMID:18617898) MGI PMID:18617898 NCBI chrNW_004936469:51,084,250...51,121,738
Ensembl chrNW_004936469:51,054,517...51,126,664 		JBrowse link
melanosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asip agouti signaling protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9548375) Ensembl
MGI		 PMID:9548375 GO_REF:0000107 NCBI chrNW_004936561:6,341,667...6,346,440
Ensembl chrNW_004936561:6,341,623...6,346,458 		JBrowse link
G Bloc1s3 biogenesis of lysosomal organelles complex 1 subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936706:1,702,154...1,704,366
Ensembl chrNW_004936706:1,684,824...1,706,544 		JBrowse link
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936534:4,550,592...4,584,482
Ensembl chrNW_004936534:4,550,592...4,584,482 		JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:8,209,091...8,226,249
Ensembl chrNW_004936471:8,209,057...8,226,353 		JBrowse link
G Dctn1 dynactin subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22275436) Ensembl
MGI		 PMID:22275436 GO_REF:0000107 NCBI chrNW_004936556:601,550...632,321
Ensembl chrNW_004936556:601,548...621,609 		JBrowse link
G Dctn2 dynactin subunit 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22275436) Ensembl
MGI		 PMID:22275436 GO_REF:0000107 NCBI chrNW_004936646:1,678,678...1,695,142
Ensembl chrNW_004936646:1,678,678...1,695,142 		JBrowse link
G Gpr143 G protein-coupled receptor 143 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936644:196,344...236,659
Ensembl chrNW_004936644:196,263...235,305 		JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 ISO positive regulation of bidirectional melanosome transport along microtubules RGD PMID:15753041 RGD:2293208 NCBI chrNW_004936471:26,589,251...26,628,302
Ensembl chrNW_004936471:26,589,161...26,628,302 		JBrowse link
G Mreg melanoregulin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22275436) InterPro
MGI
TreeGrafter
Ensembl		 PMID:22275436 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936586:1,203,520...1,261,341
Ensembl chrNW_004936586:1,203,367...1,261,421 		JBrowse link
G Myo5a myosin VA acts_upstream_of_or_within ISO (PMID:11266473)
(PMID:24721909)
(PMID:9133672)
(PMID:9548375)		 MGI PMID:9133672 PMID:9548375 PMID:11266473 PMID:24721909 NCBI chrNW_004936471:14,105,832...14,257,386
Ensembl chrNW_004936471:14,111,841...14,254,246 		JBrowse link
G Rab11a RAB11A, member RAS oncogene family involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936471:26,089,216...26,111,245
Ensembl chrNW_004936471:26,088,852...26,113,433 		JBrowse link
G Rab11b RAB11B, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:5,198,659...5,210,430
Ensembl chrNW_004936588:5,198,394...5,214,603 		JBrowse link
G Rab17 RAB17, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936525:748,851...765,636
Ensembl chrNW_004936525:748,600...765,642 		JBrowse link
G Rab1a RAB1A, member RAS oncogene family involved_in ISO (MGI:5526918|PMID:22854043) UniProt PMID:22854043 MGI:5526918 NCBI chrNW_004936491:9,858,645...9,891,674 JBrowse link
G Rab27a RAB27A, member RAS oncogene family involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11266473) Ensembl
MGI		 PMID:11266473 GO_REF:0000107 NCBI chrNW_004936471:16,738,204...16,815,561
Ensembl chrNW_004936471:16,738,230...16,815,943 		JBrowse link
negative regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnih2 cornichon family AMPA receptor auxiliary protein 2 involved_in ISO PMID:24094107 UniProt PMID:24094107 RGD:10400859 NCBI chrNW_004936599:3,310,873...3,316,575
Ensembl chrNW_004936599:3,310,872...3,316,573 		JBrowse link
negative regulation of dense core granule exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Syt4 synaptotagmin 4 involved_in ISO PMID:20303854 ParkinsonsUK-UCL PMID:20303854 RGD:11541109 NCBI chrNW_004936517:3,035,840...3,044,065
Ensembl chrNW_004936517:3,035,521...3,047,964 		JBrowse link
negative regulation of exosomal secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp9a ATPase phospholipid transporting 9A (putative) involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:3,341,207...3,428,948
Ensembl chrNW_004936514:3,341,426...3,424,637 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:12,118,538...12,913,664
Ensembl chrNW_004936489:12,120,678...13,327,872 		JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936798:297,600...304,929
Ensembl chrNW_004936798:296,066...305,176 		JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:2,126,064...2,161,451
Ensembl chrNW_004936497:2,126,061...2,161,485 		JBrowse link
neuronal dense core vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Unc13a unc-13 homolog A involved_in ISO (MGI:5476894|PMID:23229896) UniProt PMID:23229896 MGI:5476894 NCBI chrNW_004936596:3,311,358...3,370,833
Ensembl chrNW_004936596:3,312,788...3,368,916 		JBrowse link
G Unc13b unc-13 homolog B involved_in ISO (MGI:5476894|PMID:23229896) UniProt PMID:23229896 MGI:5476894 NCBI chrNW_004936524:3,320,859...3,369,865 JBrowse link
pigment granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myo7a myosin VIIA involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15572405)
(PMID:9620764)		 Ensembl
MGI		 PMID:9620764 PMID:15572405 GO_REF:0000107 NCBI chrNW_004936498:5,758,572...5,824,526
Ensembl chrNW_004936498:5,751,779...5,824,378 		JBrowse link
G Rab27a RAB27A, member RAS oncogene family involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15572405) Ensembl
MGI		 PMID:15572405 GO_REF:0000107 NCBI chrNW_004936471:16,738,204...16,815,561
Ensembl chrNW_004936471:16,738,230...16,815,943 		JBrowse link
plus-end-directed vesicle transport along microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fyco1 FYVE and coiled-coil domain autophagy adaptor 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936596:3,938...81,226
Ensembl chrNW_004936596:3,720...81,257 		JBrowse link
G Kif13a kinesin family member 13A involved_in ISO (MGI:5142383|PMID:11106728) UniProt PMID:11106728 MGI:5142383 NCBI chrNW_004936552:3,612,104...3,723,275
Ensembl chrNW_004936552:3,613,657...3,722,973 		JBrowse link
G Kif5b kinesin family member 5B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17360972) Ensembl
MGI		 PMID:17360972 GO_REF:0000107 NCBI chrNW_004936574:780,074...823,858
Ensembl chrNW_004936574:779,777...823,970 		JBrowse link
positive regulation of anterograde dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Map2 microtubule associated protein 2 involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chrNW_004936845:475,406...752,600
Ensembl chrNW_004936845:473,366...545,135 		JBrowse link
G Mecp2 methyl-CpG binding protein 2 ISO RGD PMID:22127389 RGD:12790715 NCBI chrNW_004936809:902,938...967,771
Ensembl chrNW_004936809:911,764...966,839 		JBrowse link
G Trim46 tripartite motif containing 46 involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chrNW_004936580:4,678,855...4,690,222
Ensembl chrNW_004936580:4,678,827...4,690,236 		JBrowse link
positive regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Borcs5 BLOC-1 related complex subunit 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936587:4,806,537...4,906,301
Ensembl chrNW_004936587:4,806,113...4,906,411 		JBrowse link
G Map2 microtubule associated protein 2 involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chrNW_004936845:475,406...752,600
Ensembl chrNW_004936845:473,366...545,135 		JBrowse link
positive regulation of dense core granule exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Syt4 synaptotagmin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936517:3,035,840...3,044,065
Ensembl chrNW_004936517:3,035,521...3,047,964 		JBrowse link
positive regulation of exosomal secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp13a2 ATPase cation transporting 13A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:3,968,216...3,980,821
Ensembl chrNW_004936474:3,968,506...3,980,815 		JBrowse link
G Chmp2a charged multivesicular body protein 2A involved_in ISO (PMID:22660413) UniProt PMID:22660413 NCBI chrNW_004937062:133,361...136,329 JBrowse link
G Hgs hepatocyte growth factor-regulated tyrosine kinase substrate involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:5,285,678...5,301,267
Ensembl chrNW_004936594:5,285,551...5,301,233 		JBrowse link
G Myo5b myosin VB ISO RGD PMID:18984164 RGD:11533643 NCBI chrNW_004936497:12,932,367...13,236,916
Ensembl chrNW_004936497:12,932,789...13,234,244 		JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein involved_in ISO (PMID:22660413) UniProt PMID:22660413 NCBI chrNW_004936473:24,010,942...24,086,836
Ensembl chrNW_004936473:24,010,935...24,086,846 		JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936798:297,600...304,929
Ensembl chrNW_004936798:296,066...305,176 		JBrowse link
G Sdc1 syndecan 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:11,177,804...11,199,678
Ensembl chrNW_004936493:11,177,708...11,199,804 		JBrowse link
G Sdc4 syndecan 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:7,528,538...7,562,391
Ensembl chrNW_004936514:7,555,685...7,562,391 		JBrowse link
G Sdcbp syndecan binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:14,331,971...14,347,123
Ensembl chrNW_004936496:14,331,662...14,347,197 		JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 involved_in ISO PMID:24743145 BHF-UCL PMID:24743145 RGD:10054083 NCBI chrNW_004936475:18,667,563...18,755,132
Ensembl chrNW_004936475:18,671,428...18,755,208 		JBrowse link
G Snf8 SNF8 subunit of ESCRT-II involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:12,507,147...12,520,424
Ensembl chrNW_004936490:12,507,116...12,523,674 		JBrowse link
G Stam signal transducing adaptor molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:9,627,674...9,689,658
Ensembl chrNW_004936520:9,624,628...9,689,686 		JBrowse link
G Tsg101 tumor susceptibility 101 involved_in ISO (PMID:22660413), (PMID:24105262) UniProt PMID:22660413 PMID:24105262 NCBI chrNW_004936590:61,352...62,037 JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:19,432,311...19,444,223
Ensembl chrNW_004936475:19,432,229...19,444,223 		JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:2,126,064...2,161,451
Ensembl chrNW_004936497:2,126,061...2,161,485 		JBrowse link
positive regulation of melanosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh3 cadherin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:18,908,031...18,954,402
Ensembl chrNW_004936475:18,906,493...18,955,072 		JBrowse link
positive regulation of retrograde dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mecp2 methyl-CpG binding protein 2 ISO RGD PMID:22127389 RGD:12790715 NCBI chrNW_004936809:902,938...967,771
Ensembl chrNW_004936809:911,764...966,839 		JBrowse link
positive regulation of vesicle transport along microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stk11 serine/threonine kinase 11 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936588:579,816...601,033
Ensembl chrNW_004936588:579,816...603,654 		JBrowse link
postsynaptic dense core vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Syt6 synaptotagmin 6 involved_in ISO PMID:26216953 SynGO PMID:26216953 RGD:13702162 NCBI chrNW_004936690:2,435,573...2,497,332
Ensembl chrNW_004936690:2,435,541...2,497,553 		JBrowse link
presynaptic dense core vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cadps calcium dependent secretion activator involved_in ISO (MGI:5634021|PMID:25719439)
(PMID:25719439)		 SynGO PMID:25719439 MGI:5634021 NCBI chrNW_004936637:3,543,615...4,023,710
Ensembl chrNW_004936637:3,545,211...4,022,630 		JBrowse link
G Rims1 regulating synaptic membrane exocytosis 1 involved_in ISO (PMID:31679900) SynGO PMID:31679900 NCBI chrNW_004936618:3,678,400...4,047,994
Ensembl chrNW_004936618:3,606,524...4,047,711 		JBrowse link
G Snap25 synaptosome associated protein 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:9,198,744...9,279,854
Ensembl chrNW_004936485:9,195,110...9,279,920 		JBrowse link
G Stxbp1 syntaxin binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:15,300,758...15,367,475
Ensembl chrNW_004936487:15,300,952...15,365,713 		JBrowse link
G Syt10 synaptotagmin 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936607:2,940,607...2,995,178
Ensembl chrNW_004936607:2,940,466...2,994,344 		JBrowse link
G Unc13a unc-13 homolog A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936596:3,311,358...3,370,833
Ensembl chrNW_004936596:3,312,788...3,368,916 		JBrowse link
G Unc13b unc-13 homolog B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936524:3,320,859...3,369,865 JBrowse link
G Unc13c unc-13 homolog C involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936471:15,691,357...16,225,590
Ensembl chrNW_004936471:15,691,647...16,224,147 		JBrowse link
regulation of COPII vesicle coating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mapk15 mitogen-activated protein kinase 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:8,420,850...8,425,996
Ensembl chrNW_004936470:8,420,732...8,425,884 		JBrowse link
G Preb prolactin regulatory element binding involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936493:5,416,302...5,420,138
Ensembl chrNW_004936493:5,415,971...5,420,138 		JBrowse link
G Sar1a secretion associated Ras related GTPase 1A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936521:8,422,511...8,439,945
Ensembl chrNW_004936521:8,422,446...8,441,333 		JBrowse link
G Sar1b secretion associated Ras related GTPase 1B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936647:697,930...723,577 JBrowse link
G Sec16a SEC16 homolog A, endoplasmic reticulum export factor involved_in ISO (PMID:17005010) UniProt PMID:17005010 NCBI chrNW_004936669:1,344,019...1,375,483
Ensembl chrNW_004936669:1,343,879...1,375,508 		JBrowse link
regulation of dense core granule exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Baiap3 BAI1 associated protein 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936694:2,542,521...2,556,540
Ensembl chrNW_004936694:2,543,195...2,556,540 		JBrowse link
regulation of dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mapk8 mitogen-activated protein kinase 8 involved_in ISO PMID:29166604 UniProt PMID:29166604 RGD:15023486 NCBI chrNW_004936728:1,775,746...1,893,895
Ensembl chrNW_004936728:1,775,641...1,893,907 		JBrowse link
regulation of exosomal secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp3 charged multivesicular body protein 3 NOT|involved_in ISO (PMID:22660413) UniProt PMID:22660413 NCBI chrNW_004936712:1,023,994...1,044,727
Ensembl chrNW_004936712:1,023,989...1,044,728 		JBrowse link
G Chmp6 charged multivesicular body protein 6 NOT|involved_in ISO (PMID:22660413) UniProt PMID:22660413 NCBI chrNW_004936594:4,769,409...4,775,186
Ensembl chrNW_004936594:4,769,466...4,774,293 		JBrowse link
regulation of melanosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr143 G protein-coupled receptor 143 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936644:196,344...236,659
Ensembl chrNW_004936644:196,263...235,305 		JBrowse link
regulation of postsynaptic dense core vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Syt4 synaptotagmin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936517:3,035,840...3,044,065
Ensembl chrNW_004936517:3,035,521...3,047,964 		JBrowse link
regulation of presynaptic dense core granule exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G P2rx7 purinergic receptor P2X 7 involved_in ISO PMID:24037803 SynGO PMID:24037803 RGD:13702177 NCBI chrNW_004936558:3,106,819...3,149,689
Ensembl chrNW_004936558:3,108,283...3,149,765 		JBrowse link
G Rab11b RAB11B, member RAS oncogene family involved_in ISO PMID:14627637 SynGO PMID:14627637 RGD:8554199 NCBI chrNW_004936588:5,198,659...5,210,430
Ensembl chrNW_004936588:5,198,394...5,214,603 		JBrowse link
G Rab3a RAB3A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:2,990,367...2,995,935
Ensembl chrNW_004936596:2,989,804...2,998,305 		JBrowse link
G Unc13b unc-13 homolog B involved_in ISO PMID:31679900 SynGO PMID:31679900 RGD:155230690 NCBI chrNW_004936524:3,320,859...3,369,865 JBrowse link
regulation of synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc2a4 solute carrier family 2 member 4 involved_in ISO PMID:28111082 SynGO PMID:28111082 RGD:13702195 NCBI chrNW_004936595:567,267...574,051
Ensembl chrNW_004936595:567,219...574,059 		JBrowse link
regulation of synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrk2 leucine rich repeat kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936607:628,469...761,117
Ensembl chrNW_004936607:626,991...761,123 		JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein ISO RGD PMID:18842885 RGD:8554167 NCBI chrNW_004936498:13,785,638...13,885,931
Ensembl chrNW_004936498:13,784,886...13,886,167 		JBrowse link
retrograde neuronal dense core vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif1a kinesin family member 1A involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chrNW_004936745:911,651...976,878
Ensembl chrNW_004936745:911,709...974,199 		JBrowse link
G Kif1b kinesin family member 1B involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chrNW_004936623:4,091,093...4,222,510
Ensembl chrNW_004936623:4,091,190...4,218,251 		JBrowse link
G Kif1c kinesin family member 1C involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chrNW_004936677:2,696,385...2,720,959
Ensembl chrNW_004936677:2,696,209...2,720,959 		JBrowse link
G Kif5a kinesin family member 5A involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chrNW_004936646:1,697,531...1,730,376
Ensembl chrNW_004936646:1,697,492...1,732,832 		JBrowse link
G Kif5b kinesin family member 5B involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chrNW_004936574:780,074...823,858
Ensembl chrNW_004936574:779,777...823,970 		JBrowse link
synaptic vesicle budding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf1 ADP ribosylation factor 1 ISO RGD PMID:9590176 RGD:9684955 NCBI chrNW_004936864:117,510...119,612 JBrowse link
synaptic vesicle budding from endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1g1 adaptor related protein complex 1 subunit gamma 1 involved_in ISO PMID:22539861 SynGO PMID:22539861 RGD:12050120 NCBI chrNW_004936475:21,983,248...22,063,133
Ensembl chrNW_004936475:21,983,248...22,063,181 		JBrowse link
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 involved_in ISO (PMID:20203623) SynGO PMID:20203623 NCBI chrNW_004936470:5,260,984...5,301,552
Ensembl chrNW_004936470:5,257,542...5,289,469 		JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936588:1,223,646...1,262,577
Ensembl chrNW_004936588:1,222,466...1,262,676 		JBrowse link
G Btbd8 BTB domain containing 8 involved_in ISO (PMID:29262337) SynGO PMID:29262337 NCBI chrNW_004936537:6,899,271...6,977,420
Ensembl chrNW_004936537:6,895,569...6,915,849 		JBrowse link
synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnm1 dynamin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:15,767,897...15,797,722
Ensembl chrNW_004936487:15,767,897...15,801,211 		JBrowse link
G Dnm3 dynamin 3 involved_in ISO (MGI:5285027|PMID:21689597) SynGO PMID:21689597 MGI:5285027 NCBI chrNW_004936481:14,971,977...15,411,253
Ensembl chrNW_004936481:14,971,947...15,411,288 		JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936498:13,785,638...13,885,931
Ensembl chrNW_004936498:13,784,886...13,886,167 		JBrowse link
G Snap91 synaptosome associated protein 91 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936510:7,222,200...7,345,138
Ensembl chrNW_004936510:7,223,757...7,343,742 		JBrowse link
synaptic vesicle targeting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936703:951,935...1,415,991
Ensembl chrNW_004936703:758,647...1,414,185 		JBrowse link
G Psen1 presenilin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12805290) Ensembl
MGI		 PMID:12805290 GO_REF:0000107 NCBI chrNW_004936488:2,464,623...2,528,807
Ensembl chrNW_004936488:2,464,527...2,530,065 		JBrowse link
G Scrib scribble planar cell polarity protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:8,349,175...8,370,099
Ensembl chrNW_004936470:8,349,188...8,369,864 		JBrowse link
synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5 cyclin dependent kinase 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936527:6,478,934...6,483,848
Ensembl chrNW_004936527:6,478,982...6,483,866 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14622577) Ensembl
MGI		 PMID:14622577 GO_REF:0000107 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293 		JBrowse link
G Dpysl2 dihydropyrimidinase like 2 ISO RGD PMID:19755421 RGD:2316240 NCBI chrNW_004936757:311,317...422,870
Ensembl chrNW_004936757:309,022...422,955 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (PMID:17418794) MGI PMID:17418794 NCBI chrNW_004936486:10,506,680...10,606,272
Ensembl chrNW_004936486:10,507,097...10,602,019 		JBrowse link
G Lin7a lin-7 homolog A, crumbs cell polarity complex component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14622577) Ensembl
MGI		 PMID:14622577 GO_REF:0000107 NCBI chrNW_004936698:1,675,329...1,810,845
Ensembl chrNW_004936698:1,686,929...1,810,380 		JBrowse link
G LOC101968020 transmembrane protein 230 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936492:10,625,442...10,626,682 JBrowse link
G Mylk2 myosin light chain kinase 2 ISO Mlck controls the movemnet of synaptic vesicles RGD PMID:15980175 RGD:1600508 NCBI chrNW_004936485:18,782,890...18,795,942
Ensembl chrNW_004936485:18,782,887...18,795,948 		JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO PMID:19628693 CACAO PMID:19628693 RGD:8554760 NCBI chrNW_004936703:951,935...1,415,991
Ensembl chrNW_004936703:758,647...1,414,185 		JBrowse link
G Rab3a RAB3A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:2,990,367...2,995,935
Ensembl chrNW_004936596:2,989,804...2,998,305 		JBrowse link
G Snapin SNAP associated protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:3,449,585...3,464,709
Ensembl chrNW_004936580:3,462,987...3,464,214 		JBrowse link
G Snca synuclein alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12388586) Ensembl
MGI		 PMID:12388586 GO_REF:0000107 NCBI chrNW_004936685:2,077,017...2,175,298
Ensembl chrNW_004936685:2,076,651...2,175,338 		JBrowse link
G Spg11 SPG11 vesicle trafficking associated, spatacsin involved_in ISO (PMID:24794856) UniProt PMID:24794856 NCBI chrNW_004936471:7,540,647...7,618,783 JBrowse link
G Synj1 synaptojanin 1 acts_upstream_of_or_within ISO (PMID:10535736) MGI PMID:10535736 NCBI chrNW_004936500:9,484,571...9,565,980
Ensembl chrNW_004936500:9,484,586...9,566,100 		JBrowse link
G Tmem230 transmembrane protein 230 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936485:13,772,093...13,779,201
Ensembl chrNW_004936485:13,772,106...13,779,201 		JBrowse link
G Tor1a torsin family 1 member A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:17,012,661...17,020,657
Ensembl chrNW_004936487:17,011,670...17,020,699 		JBrowse link
vesicle cytoskeletal trafficking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc186 coiled-coil domain containing 186 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27293546) Ensembl
MGI
TreeGrafter		 PMID:27293546 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936486:4,466,036...4,511,690
Ensembl chrNW_004936486:4,469,896...4,511,741 		JBrowse link
G F8a1 coagulation factor VIII associated 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936927:234,162...236,881 JBrowse link
vesicle targeting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 acts_upstream_of_or_within ISO (PMID:20592197) MGI PMID:20592197 NCBI chrNW_004936560:2,881,631...3,057,256
Ensembl chrNW_004936560:2,881,977...3,038,725 		JBrowse link
G Chp1 calcineurin like EF-hand protein 1 ISO RGD PMID:8626580 RGD:724726 NCBI chrNW_004936471:4,611,980...4,660,320
Ensembl chrNW_004936471:4,611,252...4,660,359 		JBrowse link
G Clasp1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:24859005) UniProt PMID:24859005 NCBI chrNW_004936469:49,067,357...49,335,212
Ensembl chrNW_004936469:49,067,012...49,335,219 		JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:24859005) UniProt PMID:24859005 NCBI chrNW_004936473:23,756,291...23,940,966
Ensembl chrNW_004936473:23,755,627...23,900,014 		JBrowse link
G Map4k2 mitogen-activated protein kinase kinase kinase kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:4,511,348...4,526,284
Ensembl chrNW_004936599:4,511,310...4,527,036 		JBrowse link
G Myh9 myosin heavy chain 9 involved_in ISO (PMID:18504258) CAFA PMID:18504258 NCBI chrNW_004936492:4,384,215...4,466,229
Ensembl chrNW_004936492:4,384,215...4,466,262 		JBrowse link
G Ykt6 YKT6 v-SNARE homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:19,166,225...19,179,060
Ensembl chrNW_004936478:19,166,153...19,179,719 		JBrowse link
vesicle targeting, to, from or within Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tmed10 transmembrane p24 trafficking protein 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:4,265,731...4,303,895 JBrowse link
vesicle targeting, trans-Golgi to endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1ar adaptor related protein complex 1 associated regulatory protein involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936563:3,108,242...3,144,957
Ensembl chrNW_004936563:3,108,197...3,144,980 		JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:7,782,836...7,812,142
Ensembl chrNW_004936541:7,783,322...7,812,054 		JBrowse link
vesicle targeting, trans-Golgi to periciliary membrane compartment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cep19 centrosomal protein 19 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936784:1,284,215...1,289,362
Ensembl chrNW_004936784:1,283,886...1,289,965 		JBrowse link
vesicle tethering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naglu N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21037080) Ensembl
MGI		 PMID:21037080 GO_REF:0000107 NCBI chrNW_004936490:17,305,033...17,312,167
Ensembl chrNW_004936490:17,304,586...17,314,521 		JBrowse link
vesicle tethering involved in exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exoc6 exocyst complex component 6 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936601:1,835,469...1,976,735
Ensembl chrNW_004936601:1,831,165...1,975,872 		JBrowse link
G Exoc6b exocyst complex component 6B involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936491:16,056,059...16,633,405
Ensembl chrNW_004936491:16,055,503...16,633,428 		JBrowse link
G LOC101974301 exocyst complex component 4 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936579:2,201,947...2,424,200
Ensembl chrNW_004936579:1,644,164...2,424,248 		JBrowse link
vesicle tethering to endoplasmic reticulum term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stard3 StAR related lipid transfer domain containing 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936490:14,832,067...14,856,330
Ensembl chrNW_004936490:14,832,067...14,857,722 		JBrowse link
G Stard3nl STARD3 N-terminal like involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936478:13,489,743...13,537,225
Ensembl chrNW_004936478:13,489,691...13,537,579 		JBrowse link
vesicle tethering to Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CUNH17orf75 chromosome unknown C17orf75 homolog involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936538:2,562,427...2,574,441
Ensembl chrNW_004936538:2,562,530...2,574,084 		JBrowse link
G Fam91a1 family with sequence similarity 91 member A1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936470:23,645,233...23,684,841
Ensembl chrNW_004936470:23,644,858...23,684,872 		JBrowse link
G Tbc1d23 TBC1 domain family member 23 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936630:2,977,477...3,049,209
Ensembl chrNW_004936630:2,978,138...3,036,161 		JBrowse link
G Trip11 thyroid hormone receptor interactor 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936733:233,723...300,150
Ensembl chrNW_004936733:234,531...299,639 		JBrowse link
G Wdr11 WD repeat domain 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:10,007,728...10,061,640
Ensembl chrNW_004936486:10,007,715...10,064,327 		JBrowse link
vesicle transport along actin filament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn4 actinin alpha 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936801:1,333,077...1,402,885
Ensembl chrNW_004936801:1,333,077...1,404,054 		JBrowse link
G Fnbp1l formin binding protein 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936537:5,671,517...5,789,480
Ensembl chrNW_004936537:5,671,331...5,790,054 		JBrowse link
G LOC101976892 myosin-6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004938047:7...11,037 JBrowse link
G Myo19 myosin XIX involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936490:1,679,092...1,706,976
Ensembl chrNW_004936490:1,679,187...1,706,976 		JBrowse link
G Myo1a myosin IA involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936646:1,238,630...1,258,491
Ensembl chrNW_004936646:1,238,865...1,258,040 		JBrowse link
G Myo1b myosin IB involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936506:6,832,132...7,004,262
Ensembl chrNW_004936506:6,832,670...7,004,273 		JBrowse link
G Myo1c myosin IC involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12490950) Ensembl
MGI
TreeGrafter		 PMID:12490950 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936538:7,614,985...7,639,603
Ensembl chrNW_004936538:7,611,008...7,639,581 		JBrowse link
G Myo1d myosin ID involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936538:2,102,192...2,408,953
Ensembl chrNW_004936538:2,102,186...2,408,954 		JBrowse link
G Myo1e myosin IE involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936471:20,244,424...20,435,604
Ensembl chrNW_004936471:20,244,397...20,435,648 		JBrowse link
G Myo1f myosin IF involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936588:5,299,977...5,331,065
Ensembl chrNW_004936588:5,302,018...5,336,345 		JBrowse link
G Myo1g myosin IG involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936478:19,788,032...19,802,546
Ensembl chrNW_004936478:19,788,031...19,802,501 		JBrowse link
G Myo1h myosin IH involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936769:1,134,076...1,171,040
Ensembl chrNW_004936769:1,109,753...1,171,040 		JBrowse link
G Myo5a myosin VA involved_in ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:11470781 PMID:16190983 GO_REF:0000107 GO_REF:0000118 RGD:1600832 RGD:2306437 NCBI chrNW_004936471:14,105,832...14,257,386
Ensembl chrNW_004936471:14,111,841...14,254,246 		JBrowse link
G Myo5b myosin VB involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936497:12,932,367...13,236,916
Ensembl chrNW_004936497:12,932,789...13,234,244 		JBrowse link
G Myo5c myosin VC involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936471:14,003,478...14,094,560
Ensembl chrNW_004936471:14,003,515...14,094,587 		JBrowse link
G Myo6 myosin VI involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936788:1,125,332...1,264,372
Ensembl chrNW_004936788:1,174,544...1,262,746 		JBrowse link
G Wasl WASP like actin nucleation promoting factor involved_in ISO PMID:20730103 BHF-UCL PMID:20730103 RGD:8554834 NCBI chrNW_004936605:1,741,832...1,816,694
Ensembl chrNW_004936605:1,742,776...1,816,690 		JBrowse link
vesicle transport along microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bicdl1 BICD family like cargo adaptor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936668:812,780...904,879
Ensembl chrNW_004936668:813,622...904,883 		JBrowse link
G Bicdl2 BICD family like cargo adaptor 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936694:1,136,862...1,144,045
Ensembl chrNW_004936694:1,138,125...1,143,787 		JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:11,955,334...11,967,338
Ensembl chrNW_004936501:11,955,184...11,967,436 		JBrowse link
G Dync1i1 dynein cytoplasmic 1 intermediate chain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936585:4,232,428...4,496,878
Ensembl chrNW_004936585:4,231,711...4,527,145 		JBrowse link
G Hap1 huntingtin associated protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15242649) Ensembl
MGI
TreeGrafter		 PMID:15242649 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936490:16,645,116...16,652,310
Ensembl chrNW_004936490:16,643,520...16,652,479 		JBrowse link
G Kif5b kinesin family member 5B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17360972) Ensembl
MGI		 PMID:17360972 GO_REF:0000107 NCBI chrNW_004936574:780,074...823,858
Ensembl chrNW_004936574:779,777...823,970 		JBrowse link
G LOC101966195 huntingtin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15242649) Ensembl
MGI		 PMID:15242649 GO_REF:0000107 NCBI chrNW_004936477:20,443,101...20,577,167
Ensembl chrNW_004936477:20,443,113...20,577,071
Ensembl chrNW_004936477:20,443,113...20,577,071 		JBrowse link
G LOC101974646 nuclear distribution protein nudE-like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936496:7,323,455...7,325,655 JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 ISO positive regulation of bidirectional melanosome transport along microtubules RGD PMID:15753041 RGD:2293208 NCBI chrNW_004936471:26,589,251...26,628,302
Ensembl chrNW_004936471:26,589,161...26,628,302 		JBrowse link
G Nde1 nudE neurodevelopment protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16107726) Ensembl
MGI
TreeGrafter		 PMID:16107726 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936501:3,193,962...3,234,640
Ensembl chrNW_004936501:3,193,916...3,221,700 		JBrowse link
G Ndel1 nudE neurodevelopment protein 1 like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16107726) TreeGrafter
MGI		 PMID:16107726 GO_REF:0000118 NCBI chrNW_004936595:1,656,956...1,692,775
Ensembl chrNW_004936595:1,656,956...1,689,322 		JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16107726) Ensembl
MGI
TreeGrafter		 PMID:16107726 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936538:8,612,142...8,693,698
Ensembl chrNW_004936538:8,612,049...8,694,015 		JBrowse link
G Prkcz protein kinase C zeta ISO Slc10a1/Ntcp-containing early endosomes RGD PMID:16734659 RGD:1642664 NCBI chrNW_004936737:1,303,502...1,383,135
Ensembl chrNW_004936737:1,303,887...1,321,944 		JBrowse link
G Rab1a RAB1A, member RAS oncogene family involved_in ISO (PMID:21303926) UniProt PMID:21303926 RGD:8554665 NCBI chrNW_004936491:9,858,645...9,891,674 JBrowse link
G Rasgrp1 RAS guanyl releasing protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17190838) Ensembl
MGI		 PMID:17190838 GO_REF:0000107 NCBI chrNW_004936471:2,152,231...2,222,260
Ensembl chrNW_004936471:2,153,880...2,222,229 		JBrowse link
G Trak2 trafficking kinesin protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936726:649,413...708,816
Ensembl chrNW_004936726:649,418...708,820 		JBrowse link
G Vamp7 vesicle associated membrane protein 7 involved_in ISO PMID:22705394 UniProt PMID:22705394 RGD:10047362 NCBI chrNW_004936958:345,055...393,384 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15971
    localization 5183
      organelle localization 617
        vesicle localization 205
          establishment of vesicle localization 183
            clathrin-dependent extracellular exosome endocytosis 1
            dense core granule exocytosis + 16
            dense core granule transport + 13
            establishment of pigment granule localization + 17
            establishment of secretory granule localization + 0
            establishment of synaptic vesicle localization 0
            exosomal secretion + 24
            extracellular exosome macropinocytosis 0
            synaptic vesicle transport + 45
            vesicle cytoskeletal trafficking + 68
            vesicle targeting + 40
            vesicle targeting, cis-Golgi to rough endoplasmic reticulum + 0
paths to the root