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ONTOLOGY REPORT - ANNOTATIONS

Term:establishment of vesicle localization
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Accession:GO:0051650 term browser browse the term
Definition:The directed movement of a vesicle to a specific location.
Synonyms:exact_synonym: establishment of vesicle localisation

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establishment of vesicle localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ikbkg inhibitor of nuclear factor kappa B kinase regulatory subunit gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936809:1,280,254...1,306,964 JBrowse link
G Limk2 LIM domain kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936755:374,279...443,255 JBrowse link
G Rab11a RAB11A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:26,089,216...26,111,245 JBrowse link
G Rab7a RAB7A, member RAS oncogene family acts_upstream_of_or_within_positive_effect
involved_in		 ISO
IEA		 (MGI:6356112|PMID:29712939) MGI
Ensembl		 PMID:29712939 GO_REF:0000107 MGI:6356112 NCBI chrNW_004936798:297,600...304,929 JBrowse link
G Snapin SNAP associated protein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4879078|PMID:20920792) MGI
Ensembl		 PMID:20920792 GO_REF:0000107 MGI:4879078 NCBI chrNW_004936580:3,449,585...3,464,709 JBrowse link
G Syt11 synaptotagmin 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:5,123,196...5,142,976 JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:6356112|PMID:29712939) MGI
Ensembl		 PMID:29712939 GO_REF:0000107 MGI:6356112 NCBI chrNW_004936599:2,070,211...2,079,169 JBrowse link
G Tesk1 testis associated actin remodelling kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:3,615,933...3,620,384 JBrowse link
anterograde neuronal dense core vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif1a kinesin family member 1A involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chrNW_004936745:911,651...976,878 JBrowse link
G Kif1b kinesin family member 1B involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chrNW_004936623:4,091,093...4,222,510 JBrowse link
G Kif1c kinesin family member 1C involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chrNW_004936677:2,696,385...2,720,959 JBrowse link
G Sybu syntabulin ISO RGD PMID:17611281 RGD:13217407 NCBI chrNW_004936470:35,332,243...35,439,095 JBrowse link
anterograde synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor related protein complex 3 subunit beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936549:5,964,240...6,205,245 JBrowse link
G Ap3b2 adaptor related protein complex 3 subunit beta 2 involved_in ISO (MGI:5437407|PMID:21998198) UniProt PMID:21998198 MGI:5437407 NCBI chrNW_004936483:17,301,969...17,336,962 JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:1,223,646...1,262,577 JBrowse link
G Ap3m1 adaptor related protein complex 3 subunit mu 1 involved_in ISO (MGI:5437407|PMID:21998198) UniProt PMID:21998198 MGI:5437407 NCBI chrNW_004936521:5,023,896...5,050,822 JBrowse link
G Ap3m2 adaptor related protein complex 3 subunit mu 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936785:503,615...525,361 JBrowse link
G Ap3s1 adaptor related protein complex 3 subunit sigma 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936742:1,007,684...1,088,272 JBrowse link
G Ap3s2 adaptor related protein complex 3 subunit sigma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:15,613,474...15,660,862 JBrowse link
G Bloc1s1 biogenesis of lysosomal organelles complex 1 subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:186,422...190,870 JBrowse link
G Bloc1s2 biogenesis of lysosomal organelles complex 1 subunit 2 involved_in ISO (MGI:5437407|PMID:21998198) UniProt PMID:21998198 MGI:5437407 NCBI chrNW_004939661:2,128...6,384 JBrowse link
G Bloc1s3 biogenesis of lysosomal organelles complex 1 subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936706:1,702,154...1,704,366 JBrowse link
G Bloc1s4 biogenesis of lysosomal organelles complex 1 subunit 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:18,618,330...18,619,512 JBrowse link
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936534:4,550,592...4,584,482 JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:8,209,091...8,226,249 JBrowse link
G Dtnbp1 dystrobrevin binding protein 1 involved_in ISO (MGI:5437407|PMID:21998198) UniProt PMID:21998198 MGI:5437407 NCBI chrNW_004936552:1,787,687...1,926,516 JBrowse link
G Madd MAP kinase activating death domain involved_in ISO (MGI:6189386|PMID:18849981) SynGO PMID:18849981 MGI:6189386 NCBI chrNW_004936562:1,891,120...1,936,559 JBrowse link
G Snapin SNAP associated protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:3,449,585...3,464,709 JBrowse link
G Trim46 tripartite motif containing 46 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5708763|PMID:26671463) MGI
Ensembl		 PMID:26671463 GO_REF:0000107 MGI:5708763 NCBI chrNW_004936580:4,678,855...4,690,222 JBrowse link
clathrin-dependent extracellular exosome endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itga4 integrin subunit alpha 4 ISO RGD PMID:20124479 RGD:9698434 NCBI chrNW_004936509:10,215,283...10,293,653 JBrowse link
COPI coating of Golgi vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gbf1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 involved_in ISO (PMID:12047556), (PMID:17956946) UniProt PMID:12047556 PMID:17956946 NCBI chrNW_004936600:3,479,045...3,604,241 JBrowse link
G LOC101975870 transmembrane emp24 domain-containing protein 9-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004938757:5,310...6,697 JBrowse link
COPI-coated vesicle budding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tmed10 transmembrane p24 trafficking protein 10 involved_in ISO (PMID:10052452) UniProt PMID:10052452 NCBI chrNW_004936488:4,265,731...4,303,895 JBrowse link
COPII vesicle coating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cul3 cullin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936569:6,067,230...6,131,467 JBrowse link
G Klhl12 kelch like family member 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:1,681,421...1,714,150 JBrowse link
G Pdcd6 programmed cell death 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936815:1,129,367...1,144,020 JBrowse link
G Pef1 penta-EF-hand domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:14,745,812...14,761,279 JBrowse link
G Preb prolactin regulatory element binding involved_in ISO PMID:11422940 UniProt PMID:11422940 RGD:11344947 NCBI chrNW_004936493:5,416,302...5,420,138 JBrowse link
G Sec16a SEC16 homolog A, endoplasmic reticulum export factor involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936669:1,344,019...1,375,483 JBrowse link
G Sec16b SEC16 homolog B, endoplasmic reticulum export factor involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936481:10,782,988...10,821,204 JBrowse link
G Tfg trafficking from ER to golgi regulator involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936630:2,518,944...2,555,054 JBrowse link
G Trappc2 trafficking protein particle complex subunit 2 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936470:3,278,415...3,292,905 JBrowse link
G Trappc2l trafficking protein particle complex subunit 2L involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936641:887,034...889,435 JBrowse link
dense core granule cytoskeletal transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif1a kinesin family member 1A involved_in ISO PMID:30021165
PMID:29166604		 UniProt PMID:29166604 PMID:30021165 RGD:14995321 RGD:15023486 NCBI chrNW_004936745:911,651...976,878 JBrowse link
G Ppfia2 PTPRF interacting protein alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936698:2,090,768...2,531,366 JBrowse link
G Syt4 synaptotagmin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936517:3,035,840...3,044,065 JBrowse link
G Tanc2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 involved_in ISO PMID:30021165 UniProt PMID:30021165 RGD:14995321 NCBI chrNW_004936541:3,702,743...4,115,009 JBrowse link
establishment of melanosome localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab17 RAB17, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936525:748,851...765,636 JBrowse link
G Shroom2 shroom family member 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936644:42,620...127,481 JBrowse link
exosomal secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cops5 COP9 signalosome subunit 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:7,035,973...7,050,538 JBrowse link
G LOC101970059 uncharacterized LOC101970059 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:752,572...809,127 JBrowse link
G Rab11a RAB11A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:26,089,216...26,111,245 JBrowse link
G Rab27a RAB27A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:16,738,204...16,815,561 JBrowse link
G Steap3 STEAP3 metalloreductase acts_upstream_of_or_within ISO (MGI:4367682|PMID:18617898) MGI PMID:18617898 MGI:4367682 NCBI chrNW_004936469:51,084,250...51,121,738 JBrowse link
melanosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bloc1s3 biogenesis of lysosomal organelles complex 1 subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936706:1,702,154...1,704,366 JBrowse link
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936534:4,550,592...4,584,482 JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:8,209,091...8,226,249 JBrowse link
G Dctn1 dynactin subunit 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5492030|PMID:22275436) MGI
Ensembl		 PMID:22275436 GO_REF:0000107 MGI:5492030 NCBI chrNW_004936556:601,550...632,321 JBrowse link
G Dctn2 dynactin subunit 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5492030|PMID:22275436) MGI
Ensembl		 PMID:22275436 GO_REF:0000107 MGI:5492030 NCBI chrNW_004936646:1,678,678...1,695,142 JBrowse link
G Gpr143 G protein-coupled receptor 143 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936644:196,344...236,659 JBrowse link
G LOC101978402 agouti signaling protein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1202196|PMID:9548375) MGI
Ensembl		 PMID:9548375 GO_REF:0000107 MGI:1202196 NCBI chrNW_004936561:6,341,667...6,346,440 JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 ISO positive regulation of bidirectional melanosome transport along microtubules RGD PMID:15753041 RGD:2293208 NCBI chrNW_004936471:26,589,251...26,628,302 JBrowse link
G Mreg melanoregulin acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5492030|PMID:22275436) MGI
Ensembl
InterPro		 PMID:22275436 GO_REF:0000002 GO_REF:0000107 MGI:5492030 NCBI chrNW_004936586:1,203,520...1,261,341 JBrowse link
G Myo5a myosin VA acts_upstream_of_or_within ISO (MGI:1202196|PMID:9548375)
(MGI:3653524|PMID:11266473)
(MGI:5569175|PMID:24721909)
(MGI:87417|PMID:9133672)		 MGI PMID:9133672 PMID:9548375 PMID:11266473 PMID:24721909 MGI:1202196 MGI:3653524 MGI:5569175 MGI:87417 NCBI chrNW_004936471:14,105,832...14,257,386 JBrowse link
G Rab11a RAB11A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:26,089,216...26,111,245 JBrowse link
G Rab11b RAB11B, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:5,198,659...5,210,430 JBrowse link
G Rab17 RAB17, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936525:748,851...765,636 JBrowse link
G Rab1a RAB1A, member RAS oncogene family involved_in ISO (MGI:5526918|PMID:22854043) UniProt PMID:22854043 MGI:5526918 NCBI chrNW_004936491:9,858,645...9,891,674 JBrowse link
G Rab27a RAB27A, member RAS oncogene family acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3653524|PMID:11266473) MGI
Ensembl		 PMID:11266473 GO_REF:0000107 MGI:3653524 NCBI chrNW_004936471:16,738,204...16,815,561 JBrowse link
negative regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnih2 cornichon family AMPA receptor auxiliary protein 2 involved_in ISO PMID:24094107 UniProt PMID:24094107 RGD:10400859 NCBI chrNW_004936599:3,310,873...3,316,575 JBrowse link
negative regulation of exosomal secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp9a ATPase phospholipid transporting 9A (putative) involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:3,341,207...3,428,948 JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:12,118,538...12,913,664 JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936798:297,600...304,929 JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:2,126,064...2,161,451 JBrowse link
pigment granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myo7a myosin VIIA acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3512820|PMID:15572405)
(MGI:1267003|PMID:9620764)		 MGI
Ensembl		 PMID:9620764 PMID:15572405 GO_REF:0000107 MGI:1267003 MGI:3512820 NCBI chrNW_004936498:5,758,572...5,824,526 JBrowse link
G Rab27a RAB27A, member RAS oncogene family acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3512820|PMID:15572405) MGI
Ensembl		 PMID:15572405 GO_REF:0000107 MGI:3512820 NCBI chrNW_004936471:16,738,204...16,815,561 JBrowse link
plus-end-directed vesicle transport along microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fyco1 FYVE and coiled-coil domain autophagy adaptor 1 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936596:3,938...81,226 JBrowse link
G Kif13a kinesin family member 13A involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936552:3,612,104...3,723,275 JBrowse link
G Kif5b kinesin family member 5B acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3763812|PMID:17360972) MGI
Ensembl		 PMID:17360972 GO_REF:0000107 MGI:3763812 NCBI chrNW_004936574:780,074...823,858 JBrowse link
positive regulation of anterograde dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Map2 microtubule associated protein 2 involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chrNW_004936845:475,406...752,600 JBrowse link
G Mecp2 methyl-CpG binding protein 2 ISO RGD PMID:22127389 RGD:12790715 NCBI chrNW_004936809:902,938...967,771 JBrowse link
G Trim46 tripartite motif containing 46 involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chrNW_004936580:4,678,855...4,690,222 JBrowse link
positive regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Map2 microtubule associated protein 2 involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chrNW_004936845:475,406...752,600 JBrowse link
positive regulation of exosomal secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp13a2 ATPase cation transporting 13A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:3,968,216...3,980,821 JBrowse link
G Chmp2a charged multivesicular body protein 2A involved_in ISO (PMID:22660413) UniProt PMID:22660413 NCBI chrNW_004937062:133,361...136,329 JBrowse link
G Hgs hepatocyte growth factor-regulated tyrosine kinase substrate involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:5,285,678...5,301,267 JBrowse link
G LOC101960082 syndecan binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:14,331,971...14,347,123 JBrowse link
G LOC101964793 programmed cell death 6 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:24,010,942...24,086,836 JBrowse link
G Myo5b myosin VB ISO RGD PMID:18984164 RGD:11533643 NCBI chrNW_004936497:12,932,367...13,236,916 JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936798:297,600...304,929 JBrowse link
G Sdc1 syndecan 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:11,177,804...11,199,678 JBrowse link
G Sdc4 syndecan 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:7,528,538...7,562,391 JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 involved_in ISO PMID:24743145 BHF-UCL PMID:24743145 RGD:10054083 NCBI chrNW_004936475:18,667,563...18,755,132 JBrowse link
G Snf8 SNF8 subunit of ESCRT-II involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:12,507,147...12,520,424 JBrowse link
G Stam signal transducing adaptor molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:9,627,674...9,689,658 JBrowse link
G Tsg101 tumor susceptibility 101 involved_in ISO (PMID:22660413), (PMID:24105262) UniProt PMID:22660413 PMID:24105262 NCBI chrNW_004936590:61,352...62,037 JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:19,432,311...19,444,223 JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:2,126,064...2,161,451 JBrowse link
positive regulation of melanosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh3 cadherin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:18,908,031...18,954,402 JBrowse link
positive regulation of retrograde dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mecp2 methyl-CpG binding protein 2 ISO RGD PMID:22127389 RGD:12790715 NCBI chrNW_004936809:902,938...967,771 JBrowse link
positive regulation of vesicle transport along microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stk11 serine/threonine kinase 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:579,816...601,033 JBrowse link
regulation of COPII vesicle coating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mapk15 mitogen-activated protein kinase 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:8,420,850...8,425,996 JBrowse link
G Preb prolactin regulatory element binding involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004936493:5,416,302...5,420,138 JBrowse link
regulation of dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mapk8 mitogen-activated protein kinase 8 involved_in ISO PMID:29166604 UniProt PMID:29166604 RGD:15023486 NCBI chrNW_004936728:1,775,746...1,893,895 JBrowse link
regulation of exosomal secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp3 charged multivesicular body protein 3 NOT|involved_in ISO (PMID:22660413) UniProt PMID:22660413 NCBI chrNW_004936712:1,023,994...1,044,727 JBrowse link
G Chmp6 charged multivesicular body protein 6 NOT|involved_in ISO (PMID:22660413) UniProt PMID:22660413 NCBI chrNW_004936594:4,769,409...4,775,186 JBrowse link
regulation of melanosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr143 G protein-coupled receptor 143 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936644:196,344...236,659 JBrowse link
regulation of synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc2a4 solute carrier family 2 member 4 involved_in ISO PMID:28111082 SynGO PMID:28111082 RGD:13702195 NCBI chrNW_004936595:567,267...574,051 JBrowse link
regulation of synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrk2 leucine rich repeat kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936607:628,469...761,117 JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein ISO RGD PMID:18842885 RGD:8554167 NCBI chrNW_004936498:13,785,638...13,885,931 JBrowse link
retrograde neuronal dense core vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif1a kinesin family member 1A involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chrNW_004936745:911,651...976,878 JBrowse link
G Kif1b kinesin family member 1B involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chrNW_004936623:4,091,093...4,222,510 JBrowse link
G Kif1c kinesin family member 1C involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chrNW_004936677:2,696,385...2,720,959 JBrowse link
G Kif5a kinesin family member 5A involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chrNW_004936646:1,697,531...1,730,376 JBrowse link
G Kif5b kinesin family member 5B involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chrNW_004936574:780,074...823,858 JBrowse link
synaptic vesicle budding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf1 ADP ribosylation factor 1 ISO RGD PMID:9590176 RGD:9684955 NCBI chrNW_004936864:117,510...119,612 JBrowse link
synaptic vesicle budding from endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1g1 adaptor related protein complex 1 subunit gamma 1 involved_in ISO PMID:22539861 SynGO PMID:22539861 RGD:12050120 NCBI chrNW_004936475:21,983,248...22,063,133 JBrowse link
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 involved_in ISO (MGI:5617942|PMID:20203623) SynGO PMID:20203623 MGI:5617942 NCBI chrNW_004936470:5,260,984...5,301,552 JBrowse link
G Ap3b1 adaptor related protein complex 3 subunit beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936549:5,964,240...6,205,245 JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:1,223,646...1,262,577 JBrowse link
G Btbd8 BTB domain containing 8 involved_in ISO (MGI:6104538|PMID:29262337) SynGO PMID:29262337 MGI:6104538 NCBI chrNW_004936537:6,899,271...6,977,420 JBrowse link
synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnm1 dynamin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:15,767,897...15,797,722 JBrowse link
G Dnm3 dynamin 3 involved_in ISO (MGI:5285027|PMID:21689597) SynGO PMID:21689597 MGI:5285027 NCBI chrNW_004936481:14,971,977...15,411,253 JBrowse link
G Snap91 synaptosome associated protein 91 involved_in ISO (MGI:5707086|PMID:26412491) SynGO PMID:26412491 MGI:5707086 NCBI chrNW_004936510:7,222,200...7,345,138 JBrowse link
synaptic vesicle targeting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936703:951,935...1,415,991 JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2664026|PMID:12805290) MGI
Ensembl		 PMID:12805290 GO_REF:0000107 MGI:2664026 NCBI chrNW_004936488:2,464,623...2,528,807 JBrowse link
G Scrib scribble planar cell polarity protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:8,349,175...8,370,099 JBrowse link
synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2680876|PMID:14622577) MGI
Ensembl		 PMID:14622577 GO_REF:0000107 MGI:2680876 NCBI chrNW_004936473:29,999,542...30,034,610 JBrowse link
G Dpysl2 dihydropyrimidinase like 2 ISO RGD PMID:19755421 RGD:2316240 NCBI chrNW_004936757:311,317...422,870 JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (MGI:3761431|PMID:17418794) MGI PMID:17418794 MGI:3761431 NCBI chrNW_004936486:10,506,680...10,606,272 JBrowse link
G Lin7a lin-7 homolog A, crumbs cell polarity complex component acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2680876|PMID:14622577) MGI
Ensembl		 PMID:14622577 GO_REF:0000107 MGI:2680876 NCBI chrNW_004936698:1,675,329...1,810,845 JBrowse link
G Mylk2 myosin light chain kinase 2 ISO Mlck controls the movemnet of synaptic vesicles RGD PMID:15980175 RGD:1600508 NCBI chrNW_004936485:18,782,890...18,795,942 JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO PMID:19628693 CACAO PMID:19628693 RGD:8554760 NCBI chrNW_004936703:951,935...1,415,991 JBrowse link
G Rab3a RAB3A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:2,990,367...2,995,935 JBrowse link
G Snapin SNAP associated protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:3,449,585...3,464,709 JBrowse link
G Snca synuclein alpha acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2388931|PMID:12388586) MGI
Ensembl		 PMID:12388586 GO_REF:0000107 MGI:2388931 NCBI chrNW_004936685:2,077,017...2,175,298 JBrowse link
G Spg11 SPG11 vesicle trafficking associated, spatacsin involved_in ISO (PMID:24794856) UniProt PMID:24794856 NCBI chrNW_004936471:7,540,647...7,618,783 JBrowse link
G Synj1 synaptojanin 1 acts_upstream_of_or_within ISO (MGI:1346710|PMID:10535736) MGI PMID:10535736 MGI:1346710 NCBI chrNW_004936500:9,484,571...9,565,980 JBrowse link
G Tmem230 transmembrane protein 230 involved_in ISO (PMID:27270108) UniProt PMID:27270108 NCBI chrNW_004936485:13,772,093...13,779,201 JBrowse link
G Tor1a torsin family 1 member A involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936487:17,012,661...17,020,657 JBrowse link
vesicle cytoskeletal trafficking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc186 coiled-coil domain containing 186 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:6102228|PMID:27293546) MGI
Ensembl		 PMID:27293546 GO_REF:0000107 MGI:6102228 NCBI chrNW_004936486:4,466,036...4,511,690 JBrowse link
G F8a1 coagulation factor VIII associated 1 involved_in ISO PMID:16476778 UniProt PMID:16476778 RGD:14697710 NCBI chrNW_004936927:234,162...236,881 JBrowse link
vesicle targeting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 acts_upstream_of_or_within ISO (MGI:4461813|PMID:20592197) MGI PMID:20592197 MGI:4461813 NCBI chrNW_004936560:2,881,631...3,057,256 JBrowse link
G Chp1 calcineurin like EF-hand protein 1 ISO RGD PMID:8626580 RGD:724726 NCBI chrNW_004936471:4,611,980...4,660,320 JBrowse link
G Clasp1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:24859005) UniProt PMID:24859005 NCBI chrNW_004936469:49,067,357...49,335,212 JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:24859005) UniProt PMID:24859005 NCBI chrNW_004936473:23,756,291...23,940,966 JBrowse link
G Map4k2 mitogen-activated protein kinase kinase kinase kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:4,511,348...4,526,284 JBrowse link
G Myh9 myosin heavy chain 9 involved_in ISO (PMID:18504258) CAFA PMID:18504258 NCBI chrNW_004936492:4,384,215...4,466,229 JBrowse link
G Ykt6 YKT6 v-SNARE homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:19,166,225...19,179,060 JBrowse link
vesicle targeting, to, from or within Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tmed10 transmembrane p24 trafficking protein 10 involved_in
acts_upstream_of_or_within		 ISO PMID:17101722
(PMID:17101722)		 HGNC-UCL PMID:17101722 RGD:2317246 NCBI chrNW_004936488:4,265,731...4,303,895 JBrowse link
vesicle targeting, trans-Golgi to endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1ar adaptor related protein complex 1 associated regulatory protein involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936563:3,108,242...3,144,957 JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:7,782,836...7,812,142 JBrowse link
vesicle targeting, trans-Golgi to periciliary membrane compartment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cep19 centrosomal protein 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936784:1,284,215...1,289,362 JBrowse link
vesicle tethering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trappc2 trafficking protein particle complex subunit 2 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936470:3,278,415...3,292,905 JBrowse link
G Trappc2l trafficking protein particle complex subunit 2L involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936641:887,034...889,435 JBrowse link
vesicle tethering involved in exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exoc6 exocyst complex component 6 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936601:1,835,469...1,976,735 JBrowse link
G Exoc6b exocyst complex component 6B involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000117 NCBI chrNW_004936491:16,056,059...16,633,405 JBrowse link
G LOC101974301 exocyst complex component 4 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936579:2,201,947...2,424,200 JBrowse link
vesicle tethering to endoplasmic reticulum term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stard3 StAR related lipid transfer domain containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:14,832,067...14,856,330 JBrowse link
G Stard3nl STARD3 N-terminal like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:13,489,743...13,537,225 JBrowse link
vesicle tethering to Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CUNH17orf75 chromosome unknown C17orf75 homolog involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936538:2,562,427...2,574,441 JBrowse link
G Fam91a1 family with sequence similarity 91 member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:23,645,233...23,684,841 JBrowse link
G Tbc1d23 TBC1 domain family member 23 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936630:2,977,477...3,049,209 JBrowse link
G Trip11 thyroid hormone receptor interactor 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936733:233,723...300,150 JBrowse link
G Wdr11 WD repeat domain 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:10,007,728...10,061,640 JBrowse link
vesicle transport along actin filament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn4 actinin alpha 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936801:1,333,077...1,402,885 JBrowse link
G Fnbp1l formin binding protein 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936537:5,671,517...5,789,480 JBrowse link
G Myo1c myosin IC acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2447241|PMID:12490950) MGI
Ensembl		 PMID:12490950 GO_REF:0000107 MGI:2447241 NCBI chrNW_004936538:7,614,985...7,639,603 JBrowse link
G Myo5a myosin VA involved_in ISO
IEA		 RGD
Ensembl		 PMID:11470781 PMID:16190983 GO_REF:0000107 RGD:1600832 RGD:2306437 NCBI chrNW_004936471:14,105,832...14,257,386 JBrowse link
G Wasl WASP like actin nucleation promoting factor involved_in ISO PMID:20730103 BHF-UCL PMID:20730103 RGD:8554834 NCBI chrNW_004936605:1,741,832...1,816,694 JBrowse link
vesicle transport along microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:11,955,334...11,967,338 JBrowse link
G Dync1i1 dynein cytoplasmic 1 intermediate chain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936585:4,232,428...4,496,878 JBrowse link
G Hap1 huntingtin associated protein 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3046393|PMID:15242649) MGI
Ensembl		 PMID:15242649 GO_REF:0000107 MGI:3046393 NCBI chrNW_004936490:16,645,116...16,652,310 JBrowse link
G Kif5b kinesin family member 5B acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3763812|PMID:17360972) MGI
Ensembl		 PMID:17360972 GO_REF:0000107 MGI:3763812 NCBI chrNW_004936574:780,074...823,858 JBrowse link
G LOC101966195 huntingtin acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3046393|PMID:15242649) MGI
Ensembl		 PMID:15242649 GO_REF:0000107 MGI:3046393 NCBI chrNW_004936477:20,443,101...20,577,167 JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 ISO positive regulation of bidirectional melanosome transport along microtubules RGD PMID:15753041 RGD:2293208 NCBI chrNW_004936471:26,589,251...26,628,302 JBrowse link
G Nde1 nudE neurodevelopment protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3588829|PMID:16107726) Ensembl
MGI		 PMID:16107726 GO_REF:0000107 MGI:3588829 NCBI chrNW_004936501:3,193,962...3,234,640 JBrowse link
G Ndel1 nudE neurodevelopment protein 1 like 1 acts_upstream_of_or_within ISO (MGI:3588829|PMID:16107726) MGI PMID:16107726 MGI:3588829 NCBI chrNW_004936595:1,656,956...1,692,775 JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3588829|PMID:16107726) Ensembl
MGI		 PMID:16107726 GO_REF:0000107 MGI:3588829 NCBI chrNW_004936538:8,612,142...8,693,698 JBrowse link
G Prkcz protein kinase C zeta ISO Slc10a1/Ntcp-containing early endosomes RGD PMID:16734659 RGD:1642664 NCBI chrNW_004936737:1,303,502...1,383,135 JBrowse link
G Rab1a RAB1A, member RAS oncogene family involved_in ISO (PMID:21303926) UniProt PMID:21303926 RGD:8554665 NCBI chrNW_004936491:9,858,645...9,891,674 JBrowse link
G Rasgrp1 RAS guanyl releasing protein 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3758152|PMID:17190838) MGI
Ensembl		 PMID:17190838 GO_REF:0000107 MGI:3758152 NCBI chrNW_004936471:2,152,231...2,222,260 JBrowse link
G Vamp7 vesicle associated membrane protein 7 involved_in ISO PMID:22705394 UniProt PMID:22705394 RGD:10047362 NCBI chrNW_004936958:345,055...393,384 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 14984
    localization 4745
      organelle localization 500
        vesicle localization 173
          establishment of vesicle localization 150
            clathrin-dependent extracellular exosome endocytosis 1
            dense core granule transport + 13
            establishment of pigment granule localization + 18
            establishment of secretory granule localization + 0
            establishment of synaptic vesicle localization 0
            exosomal secretion + 24
            extracellular exosome macropinocytosis 0
            synaptic vesicle transport + 41
            vesicle cytoskeletal trafficking + 51
            vesicle targeting + 37
            vesicle targeting, cis-Golgi to rough endoplasmic reticulum + 0
paths to the root