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ONTOLOGY REPORT - ANNOTATIONS


Term:vesicle localization
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Accession:GO:0051648 term browser browse the term
Definition:Any process in which a vesicle or vesicles are transported to, and/or maintained in, a specific location.
Synonyms:exact_synonym: cytoplasmic vesicle localization;   establishment and maintenance of vesicle localization;   vesicle localisation


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vesicle localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myo1a myosin IA involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:8692943)
UniProt
Ensembl
RGD
PMID:8692943 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:63,542,988...63,557,944 JBrowse link
G Tpgs1 tubulin polyglutamylase complex subunit 1 acts_upstream_of_or_within ISO MGI:2388468 (MGI:3760183|PMID:17360631) RGD PMID:17360631 MGI:3760183 NCBI chr 7:10,029,842...10,035,764 JBrowse link
anterograde neuronal dense core vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif1a kinesin family member 1A involved_in IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 9:93,563,033...93,647,412 JBrowse link
G Kif1b kinesin family member 1B involved_in IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 5:159,607,697...159,742,778 JBrowse link
G Kif1c kinesin family member 1C involved_in IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr10:55,414,412...55,444,587 JBrowse link
G Sybu syntabulin IMP RGD PMID:17611281 RGD:13217407 NCBI chr 7:75,847,000...75,948,919 JBrowse link
anterograde synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor related protein complex 3 subunit beta 1 involved_in IBA
ISO
PMID:21873635
(MGI:5437407|PMID:21998198)
RGD PMID:21998198, PMID:21873635 MGI:5437407, RGD:13792537 NCBI chr 2:25,600,069...25,800,937 JBrowse link
G Ap3b2 adaptor related protein complex 3 subunit beta 2 involved_in IBA
ISO
PMID:21873635
(MGI:5437407|PMID:21998198)
RGD PMID:21998198, PMID:21873635 MGI:5437407, RGD:13792537 NCBI chr 1:135,412,580...135,445,191 JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 involved_in IBA
ISO
PMID:21873635
(MGI:5437407|PMID:21998198)
RGD PMID:21998198, PMID:21873635 MGI:5437407, RGD:13792537 NCBI chr 7:8,970,249...9,005,651 JBrowse link
G Ap3m1 adaptor related protein complex 3 subunit mu 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5437407|PMID:21998198)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21998198 GO_REF:0000024 GO_REF:0000107 MGI:5437407 NCBI chr15:3,246,616...3,264,846 JBrowse link
G Ap3m2 adaptor related protein complex 3 subunit mu 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5437407|PMID:21998198)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:21998198 GO_REF:0000024 GO_REF:0000107 MGI:5437407 NCBI chr16:69,217,526...69,237,372 JBrowse link
G Ap3s1 adaptor related protein complex 3 subunit sigma 1 involved_in ISO (MGI:5437407|PMID:21998198) RGD PMID:21998198 MGI:5437407 NCBI chr18:39,462,727...39,531,626 JBrowse link
G Ap3s2 adaptor related protein complex 3 subunit sigma 2 involved_in ISO (MGI:5437407|PMID:21998198) RGD PMID:21998198 MGI:5437407 NCBI chr 1:133,818,825...133,859,269 JBrowse link
G Bloc1s1 biogenesis of lysosomal organelles complex-1, subunit 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5437407|PMID:21998198)
UniProt
RGD
PMID:21998198 GO_REF:0000024 MGI:5437407 NCBI chr 7:1,347,495...1,351,103 JBrowse link
G Bloc1s2 biogenesis of lysosomal organelles complex-1, subunit 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5437407|PMID:21998198)
UniProt
RGD
PMID:21998198 GO_REF:0000024 MGI:5437407 NCBI chr 1:243,024,611...243,031,749 JBrowse link
G Bloc1s3 biogenesis of lysosomal organelles complex-1, subunit 3 involved_in ISO (MGI:5437407|PMID:21998198) RGD PMID:21998198 MGI:5437407 NCBI chr 1:79,155,914...79,158,326 JBrowse link
G Bloc1s4 biogenesis of lysosomal organelles complex 1 subunit 4 involved_in ISO (MGI:5437407|PMID:21998198) RGD PMID:21998198 MGI:5437407 NCBI chr14:74,043,025...74,044,325 JBrowse link
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 involved_in ISS
ISO
GO_REF:0000024
(MGI:5437407|PMID:21998198)
UniProt
RGD
PMID:21998198 GO_REF:0000024 MGI:5437407 NCBI chr17:26,171,965...26,197,276 JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in ISS
ISO
GO_REF:0000024
(MGI:5437407|PMID:21998198)
UniProt
RGD
PMID:21998198 GO_REF:0000024 MGI:5437407 NCBI chr 3:109,816,397...109,826,528 JBrowse link
G Dtnbp1 dystrobrevin binding protein 1 involved_in IBA
ISO
ISS
PMID:21873635
(MGI:5437407|PMID:21998198)
GO_REF:0000024
RGD
UniProt
PMID:21998198, PMID:21873635 GO_REF:0000024 MGI:5437407, RGD:13792537 NCBI chr17:19,685,218...19,776,668 JBrowse link
G Madd MAP-kinase activating death domain involved_in ISO (MGI:6189386|PMID:18849981) RGD PMID:18849981 MGI:6189386 NCBI chr 3:77,114,330...77,157,865 JBrowse link
G Snapin SNAP-associated protein involved_in ISS
ISO
GO_REF:0000024
(MGI:5437407|PMID:21998198)
UniProt
RGD
PMID:21998198 GO_REF:0000024 MGI:5437407 NCBI chr 2:175,971,575...175,974,164 JBrowse link
G Trim46 tripartite motif-containing 46 acts_upstream_of_or_within ISO (MGI:5708763|PMID:26671463) RGD PMID:26671463 MGI:5708763 NCBI chr 2:174,641,494...174,654,237 JBrowse link
clathrin-dependent extracellular exosome endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itga4 integrin subunit alpha 4 IMP RGD PMID:20124479 RGD:9698434 NCBI chr 3:64,162,764...64,235,010 JBrowse link
COPI coating of Golgi vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arfgap2 ADP-ribosylation factor GTPase activating protein 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:77,236,305...77,248,445 JBrowse link
G Arfgap3 ADP-ribosylation factor GTPase activating protein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:114,432,873...114,479,206 JBrowse link
G Gbf1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 involved_in ISO (PMID:12047556), (PMID:17956946) RGD PMID:12047556 PMID:17956946 NCBI chr 1:245,018,535...245,147,052 JBrowse link
G Tmed9 transmembrane p24 trafficking protein 9 involved_in ISO
IBA
(PMID:18287528)
PMID:21873635
RGD PMID:18287528, PMID:21873635 RGD:13792537 NCBI chr17:9,029,646...9,034,160 JBrowse link
COPI-coated vesicle budding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tmed10 transmembrane p24 trafficking protein 10 involved_in ISO
ISS
(PMID:10052452)
GO_REF:0000024
RGD
UniProt
PMID:10052452 GO_REF:0000024 NCBI chr 6:104,991,843...105,026,705 JBrowse link
COPII vesicle coating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cul3 cullin 3 involved_in ISO
IEA
ISS
(PMID:22358839)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:22358839 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:81,592,641...81,670,428 JBrowse link
G Klhl12 kelch-like family member 12 involved_in IEA
ISS
ISO
IBA
GO_REF:0000107
GO_REF:0000024
(PMID:22358839), (PMID:27716508)
PMID:21873635
Ensembl
UniProt
RGD
PMID:22358839 PMID:27716508, PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr13:45,899,913...45,933,648 JBrowse link
G Pdcd6 programmed cell death 6 involved_in ISO
ISS
(PMID:27716508)
GO_REF:0000024
RGD
UniProt
PMID:27716508 GO_REF:0000024 NCBI chr 1:28,966,518...28,982,188 JBrowse link
G Pef1 penta-EF hand domain containing 1 involved_in IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:27716508)
UniProt
RGD
PMID:27716508, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 5:142,451,791...142,475,061 JBrowse link
G Preb prolactin regulatory element binding involved_in IDA PMID:11422940 UniProt PMID:11422940 RGD:11344947 NCBI chr 6:25,418,805...25,422,594 JBrowse link
G Sec16a SEC16 homolog A, endoplasmic reticulum export factor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:9,229,687...9,264,837 JBrowse link
G Sec16b SEC16 homolog B, endoplasmic reticulum export factor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:69,665,757...69,727,199 JBrowse link
G Tfg trafficking from ER to golgi regulator involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:43,885,542...43,911,976 JBrowse link
dense core granule cytoskeletal transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif1a kinesin family member 1A involved_in IMP PMID:30021165
PMID:29166604
UniProt PMID:30021165, PMID:29166604 RGD:14995321, RGD:15023486 NCBI chr 9:93,563,033...93,647,412 JBrowse link
G Ppfia2 PTPRF interacting protein alpha 2 involved_in ISO (PMID:30021165) RGD PMID:30021165 NCBI chr 7:41,765,716...42,240,104 JBrowse link
G Syt4 synaptotagmin 4 involved_in IMP
ISO
PMID:29166604
(MGI:6104122|PMID:29166604)
RGD PMID:29166604, PMID:29166604 MGI:6104122, RGD:15023486 NCBI chr18:23,036,973...23,046,380 JBrowse link
G Tanc2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 involved_in IMP PMID:30021165 UniProt PMID:30021165 RGD:14995321 NCBI chr10:90,553,124...90,873,477 JBrowse link
establishment of melanosome localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab17 RAB17, member RAS oncogene family involved_in ISO (MGI:5487521|PMID:21291502) RGD PMID:21291502 MGI:5487521 NCBI chr 9:91,552,924...91,566,759 JBrowse link
G Shroom2 shroom family member 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:21,812,469...21,983,724 JBrowse link
establishment of vesicle localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ikbkg inhibitor of nuclear factor kappa B kinase regulatory subunit gamma involved_in ISO (PMID:24561039) RGD PMID:24561039 NCBI chr  X:152,216,485...152,241,476 JBrowse link
G Limk2 LIM domain kinase 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:25849865)
UniProt
RGD
PMID:25849865 GO_REF:0000024 NCBI chr14:78,208,182...78,286,106 JBrowse link
G Rab11a RAB11a, member RAS oncogene family involved_in ISO (PMID:24561039) RGD PMID:24561039 NCBI chr 8:65,223,698...65,246,461 JBrowse link
G Rab7a RAB7A, member RAS oncogene family acts_upstream_of_or_within_positive_effect ISO (MGI:6356112|PMID:29712939) RGD PMID:29712939 MGI:6356112 NCBI chr 4:120,461,966...120,510,756 JBrowse link
G Syt11 synaptotagmin 11 involved_in ISS
ISO
GO_REF:0000024
(MGI:6296681|PMID:30808661)
UniProt
RGD
PMID:30808661 GO_REF:0000024 MGI:6296681 NCBI chr 2:174,206,032...174,232,540 JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 acts_upstream_of_or_within ISO (MGI:6356112|PMID:29712939) RGD PMID:29712939 MGI:6356112 NCBI chr 1:201,127,034...201,138,787 JBrowse link
G Tesk1 testis associated actin remodelling kinase 1 involved_in ISO
ISS
(PMID:25849865)
GO_REF:0000024
RGD
UniProt
PMID:25849865 GO_REF:0000024 NCBI chr 5:57,691,922...57,697,698 JBrowse link
melanosome localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr143 G protein-coupled receptor 143 involved_in ISO (PMID:19717472) RGD PMID:19717472 NCBI chr  X:22,002,914...22,027,720 JBrowse link
G Mlph melanophilin acts_upstream_of_or_within ISO MGI:1856674 (MGI:2177987|PMID:11887186), (MGI:3028456|PMID:14730011), (MGI:3614727|PMID:11886590) RGD PMID:11886590 PMID:11887186 PMID:14730011 MGI:2177987 MGI:3028456 MGI:3614727 NCBI chr 9:91,507,410...91,542,984 JBrowse link
G Mreg melanoregulin involved_in ISO (MGI:5447858|PMID:22940130) RGD PMID:22940130 MGI:5447858 NCBI chr 9:73,786,727...73,842,081 JBrowse link
G Myo5a myosin VA acts_upstream_of_or_within ISO MGI:1856004 (MGI:1930900|PMID:11266470), (MGI:3028456|PMID:14730011), (MGI:85369|PMID:8962090) RGD PMID:8962090 PMID:11266470 PMID:14730011 MGI:1930900 MGI:3028456 MGI:85369 NCBI chr 8:75,811,985...75,980,049 JBrowse link
G Rab27a RAB27A, member RAS oncogene family involved_in
acts_upstream_of_or_within
ISO (PMID:15357836)
MGI:1856656 (MGI:1930900|PMID:11266470)
RGD PMID:11266470 PMID:15357836 MGI:1930900 NCBI chr 8:73,782,730...73,836,630 JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes involved_in ISO (PMID:15790593) RGD PMID:15790593 NCBI chr12:33,024,596...33,051,399 JBrowse link
G Vps33b VPS33B, late endosome and lysosome associated involved_in ISO (PMID:15790593) RGD PMID:15790593 NCBI chr 1:134,223,967...134,247,232 JBrowse link
melanosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asip agouti signaling protein acts_upstream_of_or_within ISO MGI:1855937 (MGI:1202196|PMID:9548375) RGD PMID:9548375 MGI:1202196 NCBI chr 3:143,473,584...143,561,170 JBrowse link
G Bloc1s3 biogenesis of lysosomal organelles complex-1, subunit 3 involved_in ISO (PMID:17182842) RGD PMID:17182842 NCBI chr 1:79,155,914...79,158,326 JBrowse link
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 involved_in ISO (PMID:17182842) RGD PMID:17182842 NCBI chr17:26,171,965...26,197,276 JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in ISO
ISS
(PMID:17182842)
GO_REF:0000024
RGD
UniProt
PMID:17182842 GO_REF:0000024 NCBI chr 3:109,816,397...109,826,528 JBrowse link
G Dctn1 dynactin subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5492030|PMID:22275436)
Ensembl
RGD
PMID:22275436 GO_REF:0000107 MGI:5492030 NCBI chr 4:115,671,024...115,703,824 JBrowse link
G Dctn2 dynactin subunit 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5492030|PMID:22275436)
Ensembl
RGD
PMID:22275436 GO_REF:0000107 MGI:5492030 NCBI chr 7:63,092,061...63,107,560 JBrowse link
G Gpr143 G protein-coupled receptor 143 involved_in ISO (PMID:19717472) RGD PMID:19717472 NCBI chr  X:22,002,914...22,027,720 JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 IDA positive regulation of bidirectional melanosome transport along microtubules RGD PMID:15753041 RGD:2293208 NCBI chr 8:64,683,449...64,754,900 JBrowse link
G Mreg melanoregulin involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5492030|PMID:22275436)
RGD PMID:22275436, PMID:21873635 MGI:5492030, RGD:13792537 NCBI chr 9:73,786,727...73,842,081 JBrowse link
G Myo5a myosin VA acts_upstream_of_or_within ISO MGI:1856004|MGI:1858077 (MGI:1202196|PMID:9548375), (MGI:3653524|PMID:11266473), (MGI:5569175|PMID:24721909), (MGI:87417|PMID:9133672) RGD PMID:9133672 PMID:9548375 PMID:11266473 PMID:24721909 MGI:1202196 MGI:3653524 MGI:5569175 MGI:87417 NCBI chr 8:75,811,985...75,980,049 JBrowse link
G Rab11a RAB11a, member RAS oncogene family involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:5487521|PMID:21291502)
PMID:21873635
UniProt
RGD
PMID:21291502, PMID:21873635 GO_REF:0000024 MGI:5487521, RGD:13792537 NCBI chr 8:65,223,698...65,246,461 JBrowse link
G Rab11b RAB11B, member RAS oncogene family involved_in ISS
ISO
GO_REF:0000024
(MGI:5487521|PMID:21291502)
UniProt
RGD
PMID:21291502 GO_REF:0000024 MGI:5487521 NCBI chr 7:14,521,448...14,534,589 JBrowse link
G Rab17 RAB17, member RAS oncogene family involved_in ISO (MGI:5487521|PMID:21291502) RGD PMID:21291502 MGI:5487521 NCBI chr 9:91,552,924...91,566,759 JBrowse link
G Rab1a RAB1A, member RAS oncogene family involved_in ISO (MGI:5526918|PMID:22854043) RGD PMID:22854043 MGI:5526918 NCBI chr14:94,422,219...94,448,799 JBrowse link
G Rab27a RAB27A, member RAS oncogene family involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1856656 (MGI:3653524|PMID:11266473)
RGD PMID:11266473, PMID:21873635 MGI:3653524, RGD:13792537 NCBI chr 8:73,782,730...73,836,630 JBrowse link
G Rab27b RAB27B, member RAS oncogene family involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:63,597,554...63,794,124 JBrowse link
minus-end-directed vesicle transport along microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dync1h1 dynein cytoplasmic 1 heavy chain 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:129,615,208...129,680,888 JBrowse link
negative regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnih2 cornichon family AMPA receptor auxiliary protein 2 involved_in IMP PMID:24094107 UniProt PMID:24094107 RGD:10400859 NCBI chr 1:202,399,416...202,405,110 JBrowse link
negative regulation of synaptic vesicle clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3629385|PMID:16675393), (MGI:3772418|PMID:18082964) RGD PMID:16675393 PMID:18082964 MGI:3629385 MGI:3772418 NCBI chr 1:230,631,303...230,696,754 JBrowse link
pigment granule localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myo7a myosin VIIA acts_upstream_of_or_within ISO MGI:1856716|MGI:2155422 (MGI:3047015|PMID:14978221), (MGI:3512820|PMID:15572405), (MGI:3629265|PMID:14609561) RGD PMID:14609561 PMID:14978221 PMID:15572405 MGI:3047015 MGI:3512820 MGI:3629265 NCBI chr 1:152,342,611...152,414,171 JBrowse link
G Rab27a RAB27A, member RAS oncogene family acts_upstream_of_or_within ISO MGI:1856656 (MGI:3047015|PMID:14978221), (MGI:3512820|PMID:15572405) RGD PMID:14978221 PMID:15572405 MGI:3047015 MGI:3512820 NCBI chr 8:73,782,730...73,836,630 JBrowse link
pigment granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myo7a myosin VIIA acts_upstream_of_or_within ISO MGI:1856716|MGI:2155422 (MGI:1267003|PMID:9620764), (MGI:3512820|PMID:15572405) RGD PMID:9620764 PMID:15572405 MGI:1267003 MGI:3512820 NCBI chr 1:152,342,611...152,414,171 JBrowse link
G Rab27a RAB27A, member RAS oncogene family acts_upstream_of_or_within ISO MGI:1856656 (MGI:3512820|PMID:15572405) RGD PMID:15572405 MGI:3512820 NCBI chr 8:73,782,730...73,836,630 JBrowse link
plus-end-directed vesicle transport along microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fyco1 FYVE and coiled-coil domain autophagy adaptor 1 involved_in IBA
ISO
PMID:21873635
(PMID:20100911)
RGD PMID:20100911, PMID:21873635 RGD:13792537 NCBI chr 8:123,412,105...123,479,315 JBrowse link
G Kif13a kinesin family member 13A involved_in ISO (MGI:5142383|PMID:11106728) RGD PMID:11106728 MGI:5142383 NCBI chr17:17,766,597...17,948,517 JBrowse link
G Kif5b kinesin family member 5B acts_upstream_of_or_within ISO (MGI:3763812|PMID:17360972) RGD PMID:17360972 MGI:3763812 NCBI chr17:51,489,873...51,527,508 JBrowse link
positive regulation of anterograde dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Map2 microtubule-associated protein 2 involved_in IMP PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 9:67,723,422...67,981,886 JBrowse link
G Mecp2 methyl CpG binding protein 2 IMP RGD PMID:22127389 RGD:12790715 NCBI chr  X:151,781,177...151,844,687 JBrowse link
G Trim46 tripartite motif-containing 46 involved_in IMP PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 2:174,641,494...174,654,237 JBrowse link
positive regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Borcs5 BLOC-1 related complex subunit 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:167,458,640...167,543,556 JBrowse link
G Map2 microtubule-associated protein 2 involved_in IMP PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 9:67,723,422...67,981,886 JBrowse link
positive regulation of melanosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh3 cadherin 3 involved_in ISO (PMID:23334344) RGD PMID:23334344 NCBI chr19:34,393,596...34,444,084 JBrowse link
positive regulation of retrograde dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mecp2 methyl CpG binding protein 2 IMP RGD PMID:22127389 RGD:12790715 NCBI chr  X:151,781,177...151,844,687 JBrowse link
positive regulation of synaptic vesicle clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l1 Bcl2-like 1 involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 3:141,253,508...141,304,582 JBrowse link
G Cdh2 cadherin 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:4457945|PMID:20534458)
Ensembl
RGD
PMID:20534458 GO_REF:0000107 MGI:4457945 NCBI chr18:7,776,704...7,990,934 JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO (MGI:4457945|PMID:20534458) RGD PMID:20534458 MGI:4457945 NCBI chr 4:14,388,322...15,870,036 JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO (MGI:5284797|PMID:15620359) RGD PMID:15620359 MGI:5284797 NCBI chr 2:108,256,236...109,181,530 JBrowse link
G Nlgn2 neuroligin 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:5284797|PMID:15620359)
Ensembl
RGD
PMID:15620359 GO_REF:0000107 MGI:5284797 NCBI chr10:54,544,588...54,557,854 JBrowse link
G Nlgn3 neuroligin 3 involved_in ISO (MGI:5286761|PMID:21808020) RGD PMID:21808020 MGI:5286761 NCBI chr  X:66,427,926...66,457,378 JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein IMP RGD PMID:22851330 RGD:13506174 NCBI chr 1:144,056,415...144,138,045 JBrowse link
G Snap91 synaptosome associated protein 91 IMP RGD PMID:22851330 RGD:13506174 NCBI chr 8:87,738,056...87,852,690 JBrowse link
positive regulation of vesicle transport along microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stk11 serine/threonine kinase 11 involved_in ISO
IMP
(PMID:24643070)
(MGI:5604606|PMID:24643070)
RGD PMID:24643070, PMID:24643070 MGI:5604606, RGD:30309925 NCBI chr 7:9,574,553...9,591,315 JBrowse link
regulation of COPII vesicle coating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mapk15 mitogen-activated protein kinase 15 involved_in ISO
IEA
ISS
(PMID:24618899)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:24618899 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:107,694,907...107,714,640 JBrowse link
G Preb prolactin regulatory element binding involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:25,418,805...25,422,594 JBrowse link
G Sar1b secretion associated, Ras related GTPase 1B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:36,024,443...36,054,067 JBrowse link
regulation of dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mapk8 mitogen-activated protein kinase 8 involved_in IDA PMID:29166604 UniProt PMID:29166604 RGD:15023486 NCBI chr16:8,638,897...8,721,960 JBrowse link
regulation of melanosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr143 G protein-coupled receptor 143 involved_in ISO (MGI:3813974|PMID:18697795) RGD PMID:18697795 MGI:3813974 NCBI chr  X:22,002,914...22,027,720 JBrowse link
regulation of synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc2a4 solute carrier family 2 member 4 involved_in IMP
IDA
PMID:28111082 SynGO PMID:28111082, PMID:28111082 RGD:13702195, RGD:13702195 NCBI chr10:54,666,015...54,671,581 JBrowse link
regulation of synaptic vesicle clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcdh17 protocadherin 17 acts_upstream_of_or_within ISO (MGI:5514320|PMID:23684785) RGD PMID:23684785 MGI:5514320 NCBI chr15:60,222,088...60,316,172 JBrowse link
regulation of synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrk2 leucine-rich repeat kinase 2 involved_in IBA
ISO
PMID:21873635
(MGI:4941068|PMID:21307259)
RGD PMID:21307259, PMID:21873635 MGI:4941068, RGD:13792537 NCBI chr 7:122,826,712...122,987,711 JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein IMP RGD PMID:18842885 RGD:8554167 NCBI chr 1:144,056,415...144,138,045 JBrowse link
regulation of vesicle targeting, to, from or within Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gosr1 golgi SNAP receptor complex member 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:61,570,499...61,607,287 JBrowse link
retrograde neuronal dense core vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif1a kinesin family member 1A involved_in IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 9:93,563,033...93,647,412 JBrowse link
G Kif1b kinesin family member 1B involved_in IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 5:159,607,697...159,742,778 JBrowse link
G Kif1c kinesin family member 1C involved_in IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr10:55,414,412...55,444,587 JBrowse link
G Kif5a kinesin family member 5A involved_in IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 7:63,051,894...63,089,024 JBrowse link
G Kif5b kinesin family member 5B involved_in IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr17:51,489,873...51,527,508 JBrowse link
secretory granule localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myo5a myosin VA acts_upstream_of_or_within IDA
ISO
IMP
(MGI:3589494|PMID:15788565) RGD PMID:15788565, PMID:12615975, PMID:16190983 MGI:3589494, RGD:1298991, RGD:1600832 NCBI chr 8:75,811,985...75,980,049 JBrowse link
G Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma IMP RGD PMID:19549714 RGD:2324863 NCBI chr 6:48,766,778...48,802,098 JBrowse link
G Rasgrp1 RAS guanyl releasing protein 1 acts_upstream_of_or_within ISO MGI:2386261 (MGI:3758152|PMID:17190838) RGD PMID:17190838 MGI:3758152 NCBI chr 3:104,168,549...104,230,107 JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (MGI:4412432|PMID:19168596) RGD PMID:19168596 MGI:4412432 NCBI chr 1:254,785,956...254,978,967 JBrowse link
G Uso1 USO1 vesicle transport factor acts_upstream_of_or_within ISO (MGI:3589498|PMID:15800058) RGD PMID:15800058 MGI:3589498 NCBI chr14:15,866,638...15,932,185 JBrowse link
synaptic vesicle budding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf1 ADP-ribosylation factor 1 IMP RGD PMID:9590176 RGD:9684955 NCBI chr10:43,997,983...44,014,543 JBrowse link
synaptic vesicle budding from endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 involved_in ISO (MGI:5617942|PMID:20203623) RGD PMID:20203623 MGI:5617942 NCBI chr  X:30,572,746...30,598,961 JBrowse link
G Ap3b1 adaptor related protein complex 3 subunit beta 1 involved_in ISO (MGI:6189637|PMID:11588176) RGD PMID:11588176 MGI:6189637 NCBI chr 2:25,600,069...25,800,937 JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 involved_in IDA
ISO
IMP
IBA
PMID:22539861
(MGI:6189637|PMID:11588176)
PMID:21873635
RGD PMID:11588176, PMID:22539861, PMID:22539861, PMID:21873635 MGI:6189637, RGD:12050120, RGD:12050120, RGD:13792537 NCBI chr 7:8,970,249...9,005,651 JBrowse link
G Btbd8 BTB domain containing 8 involved_in ISO (MGI:6104538|PMID:29262337) RGD PMID:29262337 MGI:6104538 NCBI chr14:2,265,189...2,338,426 JBrowse link
synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnm1 dynamin 1 involved_in ISO UniProtKB:Q8BZ98 (MGI:5285027|PMID:21689597) RGD PMID:21689597 MGI:5285027 NCBI chr 3:15,604,782...15,648,654 JBrowse link
G Dnm3 dynamin 3 involved_in ISO UniProtKB:P39053 (MGI:5285027|PMID:21689597) RGD PMID:21689597 MGI:5285027 NCBI chr13:74,359,043...74,838,135 JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 involved_in IC PMID:21832070 SynGO PMID:21832070 RGD:9685531 NCBI chr 5:124,045,865...124,146,221 JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:144,056,415...144,138,045 JBrowse link
G Snap91 synaptosome associated protein 91 involved_in IBA
ISO
PMID:21873635
(MGI:5707086|PMID:26412491)
RGD PMID:26412491, PMID:21873635 MGI:5707086, RGD:13792537 NCBI chr 8:87,738,056...87,852,690 JBrowse link
synaptic vesicle clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:2680876|PMID:14622577)
Ensembl
RGD
PMID:14622577 GO_REF:0000107 MGI:2680876 NCBI chr 8:120,640,008...120,667,110 JBrowse link
G Nlgn1 neuroligin 1 involved_in IDA
ISO
IMP
ISS
PMID:20534458
(MGI:2665153|PMID:12796785), (MGI:3694190|PMID:10892652)
PMID:19628693
GO_REF:0000024
RGD
BHF-UCL
PMID:10892652 PMID:12796785, PMID:20534458, PMID:19628693 GO_REF:0000024 MGI:2665153 MGI:3694190, RGD:10047242, RGD:8554760 NCBI chr 2:108,256,236...109,181,530 JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:2665153|PMID:12796785)
BHF-UCL
RGD
PMID:12796785 GO_REF:0000024 MGI:2665153 NCBI chr 6:3,177,788...4,323,848 JBrowse link
G Pclo piccolo (presynaptic cytomatrix protein) involved_in ISO (MGI:4442284|PMID:20332206) RGD PMID:20332206 MGI:4442284 NCBI chr 4:19,691,439...20,050,015 JBrowse link
G Rab3a RAB3A, member RAS oncogene family involved_in ISO (MGI:4830800|PMID:20338242) RGD PMID:20338242 MGI:4830800 NCBI chr16:18,684,185...18,688,297 JBrowse link
G Syn1 synapsin I involved_in ISO (MGI:76610|PMID:7568108) RGD PMID:7568108 MGI:76610 NCBI chr  X:1,172,208...1,227,400 JBrowse link
G Syn2 synapsin II involved_in IEA
ISO
GO_REF:0000107
(MGI:3831450|PMID:18945891), (MGI:4830800|PMID:20338242)
Ensembl
RGD
PMID:18945891 PMID:20338242 GO_REF:0000107 MGI:3831450 MGI:4830800 NCBI chr 4:148,178,846...148,347,010 JBrowse link
G Syn3 synapsin III involved_in IEA
ISO
GO_REF:0000107
(MGI:2180939|PMID:12040043)
Ensembl
RGD
PMID:12040043 GO_REF:0000107 MGI:2180939 NCBI chr 7:16,216,055...17,808,790 JBrowse link
G Syndig1 synapse differentiation inducing 1 involved_in IDA
IBA
PMID:20152115
PMID:21873635
UniProt
GO_Central
PMID:20152115, PMID:21873635 RGD:8554654, RGD:13792537 NCBI chr 3:138,030,995...138,234,646 JBrowse link
synaptic vesicle coating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cltb clathrin, light chain B involved_in NAS PMID:3563513 UniProt PMID:3563513 RGD:70686 NCBI chr17:10,001,512...10,019,201 JBrowse link
synaptic vesicle targeting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3694190|PMID:10892652)
UniProt
RGD
PMID:10892652 GO_REF:0000024 MGI:3694190 NCBI chr 2:108,256,236...109,181,530 JBrowse link
G Pclo piccolo (presynaptic cytomatrix protein) involved_in NAS PMID:10707984 UniProt PMID:10707984 RGD:69383 NCBI chr 4:19,691,439...20,050,015 JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO (MGI:2664026|PMID:12805290) RGD PMID:12805290 MGI:2664026 NCBI chr 6:103,323,014...103,375,088 JBrowse link
G Scrib scribble planar cell polarity protein involved_in ISO (MGI:4365512|PMID:19458197) RGD PMID:19458197 MGI:4365512 NCBI chr 7:107,759,343...107,782,364 JBrowse link
synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5 cyclin-dependent kinase 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:10,754,682...10,760,110 JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2148594 (MGI:2680876|PMID:14622577)
Ensembl
RGD
PMID:14622577 GO_REF:0000107 MGI:2680876 NCBI chr 8:120,640,008...120,667,110 JBrowse link
G Dpysl2 dihydropyrimidinase-like 2 IDA RGD PMID:19755421 RGD:2316240 NCBI chr15:41,005,551...41,111,724 JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2183527 (MGI:3761431|PMID:17418794) RGD PMID:17418794 MGI:3761431 NCBI chr 1:184,745,418...184,850,655 JBrowse link
G Kif5a kinesin family member 5A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:63,051,894...63,089,024 JBrowse link
G Kif5b kinesin family member 5B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:51,489,873...51,527,508 JBrowse link
G Kif5c kinesin family member 5C involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:34,032,082...34,185,597 JBrowse link
G Lin7a lin-7 homolog A, crumbs cell polarity complex component involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:2680876|PMID:14622577)
Ensembl
RGD
PMID:14622577 GO_REF:0000107 MGI:2680876 NCBI chr 7:42,586,704...42,742,609 JBrowse link
G Mylk2 myosin light chain kinase 2 IMP Mlck controls the movemnet of synaptic vesicles RGD PMID:15980175 RGD:1600508 NCBI chr 3:141,376,450...141,388,357 JBrowse link
G Nlgn1 neuroligin 1 involved_in IMP PMID:19628693 CACAO PMID:19628693 RGD:8554760 NCBI chr 2:108,256,236...109,181,530 JBrowse link
G Rab3a RAB3A, member RAS oncogene family involved_in ISO (MGI:3653776|PMID:11598194) RGD PMID:11598194 MGI:3653776 NCBI chr16:18,684,185...18,688,297 JBrowse link
G Snapin SNAP-associated protein involved_in ISS
ISO
GO_REF:0000024
(PMID:18167355)
UniProt
RGD
PMID:18167355 GO_REF:0000024 NCBI chr 2:175,971,575...175,974,164 JBrowse link
G Snca synuclein alpha acts_upstream_of_or_within ISO MGI:2389489 (MGI:2388931|PMID:12388586) RGD PMID:12388586 MGI:2388931 NCBI chr 4:89,696,420...89,797,240 JBrowse link
G Spg11 SPG11 vesicle trafficking associated, spatacsin involved_in ISO
IBA
(PMID:24794856)
PMID:21873635
RGD PMID:24794856, PMID:21873635 RGD:13792537 NCBI chr 3:109,007,658...109,072,904 JBrowse link
G Synj1 synaptojanin 1 acts_upstream_of_or_within ISO MGI:2179801 (MGI:1346710|PMID:10535736) RGD PMID:10535736 MGI:1346710 NCBI chr11:30,192,629...30,269,277 JBrowse link
G Tmem230 transmembrane protein 230 involved_in ISO
ISS
(PMID:27270108)
GO_REF:0000024
RGD
UniProt
PMID:27270108 GO_REF:0000024 NCBI chr 3:119,473,109...119,497,617 JBrowse link
G Tor1a torsin family 1, member A involved_in ISS
ISO
GO_REF:0000024
(PMID:18167355)
UniProt
RGD
PMID:18167355 GO_REF:0000024 NCBI chr 3:14,250,667...14,257,704 JBrowse link
vesicle cytoskeletal trafficking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc186 coiled-coil domain containing 186 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:6102228|PMID:27293546)
RGD PMID:27293546, PMID:21873635 MGI:6102228, RGD:13792537 NCBI chr 1:255,831,663...255,871,954 JBrowse link
G F8a1 coagulation factor VIII-associated 1 involved_in IBA
IMP
PMID:21873635
PMID:16476778
GO_Central
UniProt
PMID:21873635, PMID:16476778 RGD:13792537, RGD:14697710 NCBI chr  X:150,957,357...150,958,871 JBrowse link
vesicle targeting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 acts_upstream_of_or_within ISO MGI:4360696 (MGI:4461813|PMID:20592197) RGD PMID:20592197 MGI:4461813 NCBI chr 1:15,768,047...15,886,744 JBrowse link
G Chp1 calcineurin-like EF-hand protein 1 IDA RGD PMID:8626580 RGD:724726 NCBI chr 3:106,536,009...106,571,255 JBrowse link
G Clasp1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr13:29,493,554...29,715,151 JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr 8:113,677,345...113,859,957 JBrowse link
G Exoc4 exocyst complex component 4 involved_in TAS PMID:12738960 UniProt PMID:12738960 RGD:8554028 NCBI chr 4:61,807,706...62,584,316 JBrowse link
G Map4k2 mitogen activated protein kinase kinase kinase kinase 2 involved_in ISO (MGI:83726|PMID:8643544) RGD PMID:8643544 MGI:83726 NCBI chr 1:203,645,098...203,660,515 JBrowse link
G Myh9 myosin, heavy chain 9 involved_in ISO (PMID:18504258) RGD PMID:18504258 NCBI chr 7:109,343,718...109,424,457 JBrowse link
G Stx2 syntaxin 2 TAS RGD PMID:10564647, PMID:8938452 RGD:1298910, RGD:728629 NCBI chr12:27,678,744...27,714,751 JBrowse link
G Tmed10 transmembrane p24 trafficking protein 10 involved_in NAS PMID:8663407 RGD
HGNC-UCL
PMID:8663407, PMID:8663407 RGD:68840, RGD:68840 NCBI chr 6:104,991,843...105,026,705 JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 involved_in NAS PMID:8663407 HGNC-UCL PMID:8663407 RGD:68840 NCBI chr12:32,052,542...32,061,596 JBrowse link
G Ykt6 YKT6 v-SNARE homolog involved_in ISS
ISO
PMID:9211930
(PMID:9211930)
RGD PMID:9211930, PMID:9211930 RGD:8553660 NCBI chr14:80,832,187...80,843,394 JBrowse link
vesicle targeting, to, from or within Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tmed10 transmembrane p24 trafficking protein 10 involved_in
acts_upstream_of_or_within
IEP
ISO
PMID:17101722
(PMID:17101722)
RGD PMID:17101722, PMID:17101722 RGD:2317246 NCBI chr 6:104,991,843...105,026,705 JBrowse link
vesicle targeting, trans-Golgi to endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1ar adaptor-related protein complex 1 associated regulatory protein involved_in IBA
ISO
PMID:21873635
(PMID:19706427)
RGD PMID:19706427, PMID:21873635 RGD:13792537 NCBI chr 2:216,276,631...216,309,020 JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 involved_in ISO (PMID:15020712) RGD PMID:15020712 NCBI chr10:94,542,946...94,580,174 JBrowse link
vesicle targeting, trans-Golgi to periciliary membrane compartment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cep19 centrosomal protein 19 involved_in ISS
IEA
IBA
ISO
GO_REF:0000024
GO_REF:0000107
PMID:21873635
(PMID:28659385)
UniProt
Ensembl
RGD
PMID:28659385, PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr11:68,677,869...68,687,117 JBrowse link
vesicle tethering involved in exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exoc4 exocyst complex component 4 involved_in IEA GO_REF:0000002
GO_REF:0000104
InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr 4:61,807,706...62,584,316 JBrowse link
G Exoc6 exocyst complex component 6 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:235,314,612...235,457,824 JBrowse link
G Exoc6b exocyst complex component 6B involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:117,094,741...117,550,221 JBrowse link
vesicle tethering to endoplasmic reticulum term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stard3 StAR-related lipid transfer domain containing 3 involved_in ISO (PMID:24105263), (PMID:28377464) RGD PMID:24105263 PMID:28377464 NCBI chr10:83,357,329...83,379,873 JBrowse link
G Stard3nl STARD3 N-terminal like involved_in ISO (PMID:24105263) RGD PMID:24105263 NCBI chr17:45,583,278...45,617,226 JBrowse link
vesicle tethering to Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fam91a1 family with sequence similarity 91, member A1 involved_in ISO
IBA
(PMID:29426865)
PMID:21873635
RGD PMID:29426865, PMID:21873635 RGD:13792537 NCBI chr 7:89,969,558...90,007,546 JBrowse link
G RGD1310429 similar to Protein Njmu-R1 involved_in ISO
IBA
(PMID:29426865)
PMID:21873635
RGD PMID:29426865, PMID:21873635 RGD:13792537 NCBI chr10:65,360,924...65,373,864 JBrowse link
G Tbc1d23 TBC1 domain family, member 23 involved_in IBA
ISO
PMID:21873635
(PMID:29426865)
RGD PMID:29426865, PMID:21873635 RGD:13792537 NCBI chr11:43,303,355...43,361,507 JBrowse link
G Trip11 thyroid hormone receptor interactor 11 involved_in ISO (PMID:25473115) RGD PMID:25473115 NCBI chr 6:120,995,242...121,067,693 JBrowse link
G Wdr11 WD repeat domain 11 involved_in ISO (PMID:29426865) RGD PMID:29426865 NCBI chr 1:184,165,260...184,210,834 JBrowse link
vesicle transport along actin filament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07036550.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Actn4 actinin alpha 4 involved_in ISO (PMID:25918384) RGD PMID:25918384 NCBI chr 1:84,182,783...84,251,867 JBrowse link
G Fnbp1l formin binding protein 1-like involved_in ISO (PMID:20730103) RGD PMID:20730103 NCBI chr 2:210,647,241...210,748,203 JBrowse link
G Myo15a myosin XVA involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:45,277,619...45,335,953 JBrowse link
G Myo19 myosin XIX involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:69,753,082...69,782,450 JBrowse link
G Myo1a myosin IA involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:63,542,988...63,557,944 JBrowse link
G Myo1b myosin Ib involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:49,690,043...49,852,373 JBrowse link
G Myo1c myosin 1C involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:2447241|PMID:12490950)
RGD PMID:12490950, PMID:21873635 MGI:2447241, RGD:13792537 NCBI chr10:60,498,374...60,520,752 JBrowse link
G Myo1d myosin ID involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:65,489,153...65,765,812 JBrowse link
G Myo1e myosin IE involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:70,887,934...71,080,180 JBrowse link
G Myo1f myosin IF involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:14,363,340...14,413,911 JBrowse link
G Myo1g myosin IG involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:81,386,701...81,401,843 JBrowse link
G Myo5a myosin VA involved_in IMP
ISO
IBA
(PMID:24006491)
PMID:21873635
RGD PMID:24006491, PMID:16190983, PMID:21873635, PMID:11470781 RGD:1600832, RGD:13792537, RGD:2306437 NCBI chr 8:75,811,985...75,980,049 JBrowse link
G Myo5b myosin Vb involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:68,038,759...68,341,568 JBrowse link
G Myo5c myosin VC involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:75,989,497...76,066,485 JBrowse link
G Myo6 myosin VI involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:81,087,157...81,242,022 JBrowse link
G Myo7a myosin VIIA involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:152,342,611...152,414,171 JBrowse link
G Myo7b myosin VIIb involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:23,588,307...23,669,841 JBrowse link
G Wasl WASP like actin nucleation promoting factor involved_in IDA PMID:20730103 BHF-UCL PMID:20730103 RGD:8554834 NCBI chr 4:53,083,536...53,132,061 JBrowse link
vesicle transport along microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bicdl1 BICD family like cargo adaptor 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:40,878,190...41,001,152 JBrowse link
G Bicdl2 BICD family like cargo adaptor 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:12,691,610...12,700,049 JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (PMID:22261744) RGD PMID:22261744 NCBI chr 1:181,156,071...181,169,458 JBrowse link
G Dync1i1 dynein cytoplasmic 1 intermediate chain 1 involved_in IEA
IDA
ISO
GO_REF:0000107
PMID:14985359
(PMID:24561039)
Ensembl
RGD
PMID:24561039, PMID:14985359 GO_REF:0000107, RGD:8553555 NCBI chr 4:33,852,597...34,166,159 JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:17,232,735...17,330,584 JBrowse link
G Hap1 huntingtin-associated protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
(MGI:3046393|PMID:15242649)
PMID:21873635
Ensembl
RGD
PMID:15242649, PMID:21873635 GO_REF:0000107 MGI:3046393, RGD:13792537 NCBI chr10:85,277,890...85,286,126 JBrowse link
G Htt huntingtin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3046393|PMID:15242649)
(PMID:20515468)
Ensembl
RGD
PMID:15242649 PMID:20515468 GO_REF:0000107 MGI:3046393 NCBI chr14:75,845,836...75,996,094 JBrowse link
G Kif5b kinesin family member 5B involved_in
acts_upstream_of_or_within
ISO
IDA
(PMID:28426968)
MGI:109596 (MGI:3763812|PMID:17360972)
PMID:14985359
RGD PMID:17360972 PMID:28426968, PMID:14985359 MGI:3763812, RGD:8553555 NCBI chr17:51,489,873...51,527,508 JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 IDA positive regulation of bidirectional melanosome transport along microtubules RGD PMID:15753041 RGD:2293208 NCBI chr 8:64,683,449...64,754,900 JBrowse link
G Nde1 nudE neurodevelopment protein 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:109520|MGI:1932915 (MGI:3588829|PMID:16107726)
RGD PMID:16107726, PMID:21873635 MGI:3588829, RGD:13792537 NCBI chr10:839,788...883,946 JBrowse link
G Ndel1 nudE neurodevelopment protein 1-like 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:109520|MGI:1914453 (MGI:3588829|PMID:16107726)
RGD PMID:16107726, PMID:21873635 MGI:3588829, RGD:13792537 NCBI chr10:53,505,628...53,582,025 JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1914453|MGI:1932915 (MGI:3588829|PMID:16107726)
RGD PMID:16107726, PMID:21873635 MGI:3588829, RGD:13792537 NCBI chr10:59,533,042...59,591,808 JBrowse link
G Prkcz protein kinase C, zeta IMP Slc10a1/Ntcp-containing early endosomes RGD PMID:16734659 RGD:1642664 NCBI chr 5:165,817,786...165,930,386 JBrowse link
G Rab1a RAB1A, member RAS oncogene family involved_in IMP
ISO
PMID:21303926
(PMID:21303926)
RGD PMID:21303926, PMID:21303926 RGD:8554665 NCBI chr14:94,422,219...94,448,799 JBrowse link
G Rasgrp1 RAS guanyl releasing protein 1 acts_upstream_of_or_within ISO MGI:2386261 (MGI:3758152|PMID:17190838) RGD PMID:17190838 MGI:3758152 NCBI chr 3:104,168,549...104,230,107 JBrowse link
G Trak1 trafficking kinesin protein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:120,984,445...121,139,357 JBrowse link
G Trak2 trafficking kinesin protein 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:60,348,531...60,414,036 JBrowse link
G Vamp7 vesicle-associated membrane protein 7 involved_in IDA PMID:22705394 UniProt PMID:22705394 RGD:10047362 NCBI chr12:16,728,477...16,764,261 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    localization 6444
      cellular localization 2989
        organelle localization 566
          vesicle localization 177
            establishment of vesicle localization + 158
            maintenance of vesicle location + 0
            pigment granule localization + 22
            secretory granule localization + 18
            synaptic vesicle localization + 60
paths to the root