Map2 (microtubule associated protein 2) - Rat Genome Database

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Gene: Map2 (microtubule associated protein 2) Ictidomys tridecemlineatus
Analyze
Symbol: Map2
Name: microtubule associated protein 2
RGD ID: 12672435
Description: ENCODES a protein that exhibits actin binding (ortholog); protein kinase binding (ortholog); INVOLVED IN axonogenesis (ortholog); dendrite development (ortholog); establishment of cell polarity (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); arteriovenous malformation (ortholog); asphyxia neonatorum (ortholog); FOUND IN actin cytoskeleton (ortholog); apical dendrite (ortholog); apical distal dendrite (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: microtubule associated protein 2, transcript variant X1; microtubule associated protein 2, transcript variant X11; microtubule associated protein 2, transcript variant X12; microtubule associated protein 2, transcript variant X13; microtubule associated protein 2, transcript variant X2; microtubule associated protein 2, transcript variant X3; microtubule associated protein 2, transcript variant X4; microtubule associated protein 2, transcript variant X5; microtubule associated protein 2, transcript variant X6; microtubule associated protein 2, transcript variant X7; microtubule associated protein 2, transcript variant X8; microtubule associated protein 2, transcript variant X9; microtubule-associated protein 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303165,843,181 - 166,122,293 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936845473,366 - 545,135 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936845475,406 - 752,600 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Map2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303165,843,181 - 166,122,293 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936845473,366 - 545,135 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936845475,406 - 752,600 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MAP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382209,424,047 - 209,734,112 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2209,424,047 - 209,734,147 (+)EnsemblGRCh38hg38GRCh38
GRCh372210,288,771 - 210,598,836 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362209,997,016 - 210,307,079 (+)NCBINCBI36Build 36hg18NCBI36
Build 342210,269,908 - 210,421,484NCBI
Celera2204,056,618 - 204,366,628 (+)NCBICelera
Cytogenetic Map2q34NCBI
HuRef2202,133,889 - 202,443,633 (+)NCBIHuRef
CHM1_12210,294,619 - 210,604,654 (+)NCBICHM1_1
T2T-CHM13v2.02209,904,237 - 210,214,222 (+)NCBIT2T-CHM13v2.0
Map2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39166,214,337 - 66,481,742 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl166,214,432 - 66,481,742 (+)EnsemblGRCm39 Ensembl
GRCm38166,175,202 - 66,442,583 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl166,175,273 - 66,442,583 (+)EnsemblGRCm38mm10GRCm38
MGSCv37166,221,903 - 66,489,157 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36166,108,521 - 66,375,797 (+)NCBIMGSCv36mm8
Celera166,699,319 - 66,964,492 (+)NCBICelera
Cytogenetic Map1C3NCBI
cM Map133.49NCBI
Map2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8975,173,038 - 75,431,606 (+)NCBIGRCr8
mRatBN7.2967,723,422 - 67,981,886 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl967,723,371 - 67,979,809 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx976,387,776 - 76,469,106 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0981,515,139 - 81,596,514 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0979,899,162 - 79,986,857 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0973,204,753 - 73,462,965 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl973,319,710 - 73,462,972 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0973,837,509 - 74,095,431 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4965,174,376 - 65,256,003 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1965,321,360 - 65,402,977 (+)NCBI
Celera965,377,941 - 65,459,391 (+)NCBICelera
RH 3.4 Map9593.2RGD
Cytogenetic Map9q32NCBI
Map2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554575,678,436 - 5,875,024 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554575,678,826 - 5,816,114 (-)NCBIChiLan1.0ChiLan1.0
MAP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213112,046,732 - 112,357,145 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B112,061,728 - 112,372,130 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B96,681,268 - 96,991,650 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B215,085,476 - 215,395,439 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B215,314,857 - 215,391,728 (+)Ensemblpanpan1.1panPan2
MAP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13717,316,899 - 17,611,360 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3717,466,678 - 17,607,803 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3718,197,871 - 18,492,089 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03717,252,304 - 17,547,172 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3717,260,892 - 17,545,422 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13717,357,768 - 17,502,660 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03717,171,196 - 17,465,399 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03717,188,565 - 17,479,742 (+)NCBIUU_Cfam_GSD_1.0
MAP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15112,236,119 - 112,462,929 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115112,156,578 - 112,462,932 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215124,033,358 - 124,184,546 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MAP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11095,319,649 - 95,431,106 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1095,349,157 - 95,431,320 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040103,915,685 - 104,226,077 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Map2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247656,476,346 - 6,546,116 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247656,476,544 - 6,758,959 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005341169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013365611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021720743 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021720744 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021720745 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021720746 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021720747 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021720748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021720749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021720750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021720751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021720752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294818 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294820 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294822 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294824 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294825 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294829 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294831 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294832 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294833 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294834 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294836 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294837 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294838 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294839 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294841 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294842 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294843 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294846 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294847 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002482990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010000362 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSSTOT00000004536   ⟹   ENSSTOP00000004070
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_004936845477,231 - 545,135 (-)Ensembl
Ensembl Acc Id: ENSSTOT00000021139   ⟹   ENSSTOP00000019676
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_004936845473,366 - 545,135 (-)Ensembl
Ensembl Acc Id: ENSSTOT00000036055   ⟹   ENSSTOP00000026555
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_004936845477,231 - 545,135 (-)Ensembl
RefSeq Acc Id: XM_005341169   ⟹   XP_005341226
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,577 - 166,122,293 (+)NCBI
SpeTri2.0NW_004936845475,406 - 620,473 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021720743   ⟹   XP_021576418
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,575 - 166,122,293 (+)NCBI
SpeTri2.0NW_004936845475,406 - 620,492 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021720747   ⟹   XP_021576422
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,575 - 166,122,293 (+)NCBI
SpeTri2.0NW_004936845475,406 - 620,492 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021720749   ⟹   XP_021576424
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,577 - 166,122,293 (+)NCBI
SpeTri2.0NW_004936845475,406 - 620,493 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021720750   ⟹   XP_021576425
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,577 - 166,122,293 (+)NCBI
SpeTri2.0NW_004936845475,406 - 620,493 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021720751   ⟹   XP_021576426
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,580 - 166,122,293 (+)NCBI
SpeTri2.0NW_004936845475,406 - 620,472 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021720752   ⟹   XP_021576427
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,584 - 166,122,293 (+)NCBI
SpeTri2.0NW_004936845475,406 - 620,471 (-)NCBI
Sequence:
RefSeq Acc Id: XM_040294818   ⟹   XP_040150752
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,573 - 166,122,293 (+)NCBI
RefSeq Acc Id: XM_040294819   ⟹   XP_040150753
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,843,181 - 166,122,293 (+)NCBI
RefSeq Acc Id: XM_040294820   ⟹   XP_040150754
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,573 - 166,122,293 (+)NCBI
RefSeq Acc Id: XM_040294821   ⟹   XP_040150755
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,843,181 - 166,122,293 (+)NCBI
RefSeq Acc Id: XM_040294822   ⟹   XP_040150756
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,573 - 166,122,293 (+)NCBI
RefSeq Acc Id: XM_040294823   ⟹   XP_040150757
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,573 - 166,122,293 (+)NCBI
RefSeq Acc Id: XM_040294824   ⟹   XP_040150758
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,573 - 166,122,293 (+)NCBI
RefSeq Acc Id: XM_040294825   ⟹   XP_040150759
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,573 - 166,122,293 (+)NCBI
RefSeq Acc Id: XM_040294827   ⟹   XP_040150761
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,574 - 166,122,293 (+)NCBI
RefSeq Acc Id: XM_040294828   ⟹   XP_040150762
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,574 - 166,122,293 (+)NCBI
RefSeq Acc Id: XM_040294829   ⟹   XP_040150763
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,574 - 166,122,293 (+)NCBI
RefSeq Acc Id: XM_040294830   ⟹   XP_040150764
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,574 - 166,122,293 (+)NCBI
RefSeq Acc Id: XM_040294831   ⟹   XP_040150765
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,574 - 166,122,293 (+)NCBI
RefSeq Acc Id: XM_040294832   ⟹   XP_040150766
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,575 - 166,122,293 (+)NCBI
RefSeq Acc Id: XM_040294833   ⟹   XP_040150767
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,575 - 166,122,293 (+)NCBI
RefSeq Acc Id: XM_040294834   ⟹   XP_040150768
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,574 - 166,122,293 (+)NCBI
RefSeq Acc Id: XM_040294836   ⟹   XP_040150770
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,576 - 166,122,293 (+)NCBI
RefSeq Acc Id: XM_040294837   ⟹   XP_040150771
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,576 - 166,122,293 (+)NCBI
RefSeq Acc Id: XM_040294838   ⟹   XP_040150772
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,576 - 166,122,293 (+)NCBI
RefSeq Acc Id: XM_040294839   ⟹   XP_040150773
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,575 - 166,122,293 (+)NCBI
RefSeq Acc Id: XM_040294840   ⟹   XP_040150774
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,576 - 166,122,293 (+)NCBI
RefSeq Acc Id: XM_040294841   ⟹   XP_040150775
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303166,057,537 - 166,122,293 (+)NCBI
RefSeq Acc Id: XM_040294842   ⟹   XP_040150776
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,577 - 166,122,293 (+)NCBI
RefSeq Acc Id: XM_040294843   ⟹   XP_040150777
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,576 - 166,122,293 (+)NCBI
RefSeq Acc Id: XM_040294845   ⟹   XP_040150779
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,576 - 166,122,293 (+)NCBI
RefSeq Acc Id: XM_040294846   ⟹   XP_040150780
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,576 - 166,122,293 (+)NCBI
RefSeq Acc Id: XM_040294847   ⟹   XP_040150781
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303165,975,580 - 166,122,293 (+)NCBI
Protein Sequences
Protein RefSeqs XP_005341226 (Get FASTA)   NCBI Sequence Viewer  
  XP_021576418 (Get FASTA)   NCBI Sequence Viewer  
  XP_021576422 (Get FASTA)   NCBI Sequence Viewer  
  XP_021576424 (Get FASTA)   NCBI Sequence Viewer  
  XP_021576425 (Get FASTA)   NCBI Sequence Viewer  
  XP_021576426 (Get FASTA)   NCBI Sequence Viewer  
  XP_021576427 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150752 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150753 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150754 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150755 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150756 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150757 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150758 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150759 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150761 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150762 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150763 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150764 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150765 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150766 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150767 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150768 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150770 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150771 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150772 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150773 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150774 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150775 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150776 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150777 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150779 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150780 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150781 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000004070.3
  ENSSTOP00000019676.2
  ENSSTOP00000026555.1
GenBank Protein KAG3275111 (Get FASTA)   NCBI Sequence Viewer  
  KAG3275112 (Get FASTA)   NCBI Sequence Viewer  
  KAG3275113 (Get FASTA)   NCBI Sequence Viewer  
  KAG3275114 (Get FASTA)   NCBI Sequence Viewer  
  KAG3275115 (Get FASTA)   NCBI Sequence Viewer  
  KAG3275116 (Get FASTA)   NCBI Sequence Viewer  
  KAG3275117 (Get FASTA)   NCBI Sequence Viewer  
  KAG3275118 (Get FASTA)   NCBI Sequence Viewer  
  KAG3275119 (Get FASTA)   NCBI Sequence Viewer  
  KAG3275120 (Get FASTA)   NCBI Sequence Viewer  
  KAG3275121 (Get FASTA)   NCBI Sequence Viewer  
  KAG3275122 (Get FASTA)   NCBI Sequence Viewer  
  KAG3275123 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_005341226   ⟸   XM_005341169
- Peptide Label: isoform X27
- Sequence:
RefSeq Acc Id: XP_021576425   ⟸   XM_021720750
- Peptide Label: isoform X24
- UniProtKB: I3N5N0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021576424   ⟸   XM_021720749
- Peptide Label: isoform X21
- UniProtKB: I3M4F5 (UniProtKB/TrEMBL),   I3N5N0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021576422   ⟸   XM_021720747
- Peptide Label: isoform X14
- UniProtKB: I3N5N0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021576418   ⟸   XM_021720743
- Peptide Label: isoform X13
- UniProtKB: I3N5N0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021576426   ⟸   XM_021720751
- Peptide Label: isoform X29
- UniProtKB: A0A287CYZ1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021576427   ⟸   XM_021720752
- Peptide Label: isoform X30
- Sequence:
RefSeq Acc Id: XP_040150753   ⟸   XM_040294819
- Peptide Label: isoform X1
- UniProtKB: I3N5N0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150755   ⟸   XM_040294821
- Peptide Label: isoform X1
- UniProtKB: I3N5N0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150752   ⟸   XM_040294818
- Peptide Label: isoform X1
- UniProtKB: I3N5N0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150757   ⟸   XM_040294823
- Peptide Label: isoform X2
- UniProtKB: I3N5N0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150758   ⟸   XM_040294824
- Peptide Label: isoform X3
- UniProtKB: I3N5N0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150759   ⟸   XM_040294825
- Peptide Label: isoform X4
- UniProtKB: I3N5N0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150756   ⟸   XM_040294822
- Peptide Label: isoform X1
- UniProtKB: I3N5N0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150754   ⟸   XM_040294820
- Peptide Label: isoform X1
- UniProtKB: I3N5N0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150761   ⟸   XM_040294827
- Peptide Label: isoform X5
- UniProtKB: I3N5N0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150762   ⟸   XM_040294828
- Peptide Label: isoform X6
- UniProtKB: I3N5N0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150763   ⟸   XM_040294829
- Peptide Label: isoform X7
- UniProtKB: I3N5N0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150768   ⟸   XM_040294834
- Peptide Label: isoform X12
- UniProtKB: I3N5N0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150764   ⟸   XM_040294830
- Peptide Label: isoform X8
- UniProtKB: I3N5N0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150765   ⟸   XM_040294831
- Peptide Label: isoform X9
- UniProtKB: I3N5N0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150766   ⟸   XM_040294832
- Peptide Label: isoform X10
- UniProtKB: I3N5N0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150767   ⟸   XM_040294833
- Peptide Label: isoform X11
- UniProtKB: I3N5N0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150773   ⟸   XM_040294839
- Peptide Label: isoform X18
- UniProtKB: I3N5N0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150770   ⟸   XM_040294836
- Peptide Label: isoform X15
- UniProtKB: I3N5N0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150771   ⟸   XM_040294837
- Peptide Label: isoform X16
- UniProtKB: I3N5N0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150772   ⟸   XM_040294838
- Peptide Label: isoform X17
- UniProtKB: I3N5N0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150777   ⟸   XM_040294843
- Peptide Label: isoform X23
- UniProtKB: I3N5N0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150774   ⟸   XM_040294840
- Peptide Label: isoform X19
- UniProtKB: I3N5N0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150779   ⟸   XM_040294845
- Peptide Label: isoform X25
- UniProtKB: I3N5N0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150780   ⟸   XM_040294846
- Peptide Label: isoform X26
- UniProtKB: I3N5N0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150776   ⟸   XM_040294842
- Peptide Label: isoform X22
- UniProtKB: I3N5N0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150781   ⟸   XM_040294847
- Peptide Label: isoform X28
RefSeq Acc Id: XP_040150775   ⟸   XM_040294841
- Peptide Label: isoform X20
- UniProtKB: I3N5N0 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSSTOP00000019676   ⟸   ENSSTOT00000021139
Ensembl Acc Id: ENSSTOP00000004070   ⟸   ENSSTOT00000004536
Ensembl Acc Id: ENSSTOP00000026555   ⟸   ENSSTOT00000036055
Protein Domains
MAP2/Tau projection   RII binding


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000004521 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000004536.3 UniProtKB/TrEMBL
  ENSSTOT00000021139.2 UniProtKB/TrEMBL
  ENSSTOT00000036055.1 UniProtKB/TrEMBL
InterPro MAP2/MAP4/Tau UniProtKB/TrEMBL
  MAP2_projctn UniProtKB/TrEMBL
  MAP_tubulin-bd_rpt UniProtKB/TrEMBL
  RII-bd_1 UniProtKB/TrEMBL
NCBI Gene Map2 ENTREZGENE
PANTHER MICROTUBULE-ASSOCIATED PROTEIN UniProtKB/TrEMBL
  PTHR11501:SF15 UniProtKB/TrEMBL
Pfam MAP2_projctn UniProtKB/TrEMBL
  RII_binding_1 UniProtKB/TrEMBL
  Tubulin-binding UniProtKB/TrEMBL
PROSITE TAU_MAP_1 UniProtKB/TrEMBL
  TAU_MAP_2 UniProtKB/TrEMBL
UniProt A0A287CYZ1 ENTREZGENE, UniProtKB/TrEMBL
  I3M4F5 ENTREZGENE, UniProtKB/TrEMBL
  I3N5N0 ENTREZGENE, UniProtKB/TrEMBL