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Gene: Borcs5 (BLOC-1 related complex subunit 5) Ictidomys tridecemlineatus

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Symbol:

Borcs5

Name:

BLOC-1 related complex subunit 5

RGD ID:

12553147

Description:

INVOLVED IN lysosome localization (inferred); nervous system development (inferred); organelle transport along microtubule (inferred); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); autosomal dominant intellectual developmental disorder 6 (ortholog); colorectal adenocarcinoma (ortholog); FOUND IN axon (inferred); BORC complex (inferred); cytoplasmic side of lysosomal membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

BLOC-1 related complex subunit 5, transcript variant X1; BLOC-1 related complex subunit 5, transcript variant X2; BLOC-1 related complex subunit 5, transcript variant X3; BLOC-1-related complex subunit 5; Loh12cr1; loss of heterozygosity, 12, chromosomal region 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	95,078,900 - 95,178,702 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936587	4,806,113 - 4,906,411 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936587	4,806,537 - 4,906,301 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Borcs5	Squirrel	colorectal adenocarcinoma	susceptibility	ISO	BORCS5 (Homo sapiens)	9068941	DNA:SNP:3'utr: (rs3803098) A>G (human)	RGD	PMID:27354594 and REF_RGD_ID:152177496

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Borcs5	Squirrel	Agenesis of Corpus Callosum		ISO	BORCS5 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Corpus callosum and agenesis of	ClinVar	PMID:27435318
Borcs5	Squirrel	autosomal dominant intellectual developmental disorder 6		ISO	BORCS5 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Intellectual disability and autosomal dominant 6	ClinVar	PMID:28492532

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Borcs5	Squirrel	lysosome localization	involved_in	IEA	PANTHER:PTN000780677	150520179		TreeGrafter	GO_REF:0000118
Borcs5	Squirrel	lysosome localization	involved_in	IEA	UniProtKB:Q969J3 and ensembl:ENSP00000321546	150520179		Ensembl	GO_REF:0000107
Borcs5	Squirrel	lysosome localization	involved_in	IEA	InterPro:IPR018780	150520179		InterPro	GO_REF:0000002
Borcs5	Squirrel	nervous system development	acts_upstream_of_or_within	IEA	UniProtKB:Q9D920 and ensembl:ENSMUSP00000054913	150520179		Ensembl	GO_REF:0000107
Borcs5	Squirrel	organelle transport along microtubule	involved_in	IEA	PANTHER:PTN000780677	150520179		TreeGrafter	GO_REF:0000118
Borcs5	Squirrel	organelle transport along microtubule	acts_upstream_of_or_within	IEA	UniProtKB:Q9D920 and ensembl:ENSMUSP00000054913	150520179		Ensembl	GO_REF:0000107
Borcs5	Squirrel	organelle transport along microtubule	involved_in	IEA	UniProtKB:Q969J3 and ensembl:ENSP00000321546	150520179		Ensembl	GO_REF:0000107
Borcs5	Squirrel	positive regulation of anterograde synaptic vesicle transport	involved_in	IEA	PANTHER:PTN000780677	150520179		TreeGrafter	GO_REF:0000118

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Borcs5	Squirrel	axon	is_active_in	IEA	UniProtKB:Q9D920 and ensembl:ENSMUSP00000054913	150520179		Ensembl	GO_REF:0000107
Borcs5	Squirrel	BORC complex	part_of	IEA	PANTHER:PTN000780677	150520179		TreeGrafter	GO_REF:0000118
Borcs5	Squirrel	BORC complex	part_of	IEA	UniProtKB:Q969J3 and ensembl:ENSP00000321546	150520179		Ensembl	GO_REF:0000107
Borcs5	Squirrel	cytoplasmic side of lysosomal membrane	located_in	IEA	PANTHER:PTN000780677	150520179		TreeGrafter	GO_REF:0000118
Borcs5	Squirrel	cytoplasmic side of lysosomal membrane	located_in	IEA	UniProtKB:Q969J3 and ensembl:ENSP00000321546	150520179		Ensembl	GO_REF:0000107
Borcs5	Squirrel	intracellular membrane-bounded organelle	located_in	IEA	UniProtKB:Q969J3 and ensembl:ENSP00000321546	150520179		Ensembl	GO_REF:0000107
Borcs5	Squirrel	lysosomal membrane	located_in	IEA	UniProtKB-SubCell:SL-0157	150520179		UniProt	GO_REF:0000044
Borcs5	Squirrel	lysosome	located_in	IEA	UniProtKB-KW:KW-0458	150520179		UniProt	GO_REF:0000043
Borcs5	Squirrel	lysosome	is_active_in	IEA	UniProtKB:Q9D920 and ensembl:ENSMUSP00000054913	150520179		Ensembl	GO_REF:0000107
Borcs5	Squirrel	membrane	located_in	IEA	UniProtKB:Q969J3 and ensembl:ENSP00000321546	150520179		Ensembl	GO_REF:0000107
Borcs5	Squirrel	membrane	located_in	IEA	UniProtKB-KW:KW-0472	150520179		UniProt	GO_REF:0000043
Borcs5	Squirrel	plasma membrane	located_in	IEA	UniProtKB:Q969J3 and ensembl:ENSP00000321546	150520179		Ensembl	GO_REF:0000107
Borcs5	Squirrel	plus-end kinesin complex	located_in	IEA	UniProtKB:Q969J3 and ensembl:ENSP00000321546	150520179		Ensembl	GO_REF:0000107
Borcs5	Squirrel	synaptic vesicle membrane	located_in	IEA	PANTHER:PTN000780677	150520179		TreeGrafter	GO_REF:0000118

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Borcs5	Squirrel	protein binding	enables	ISO	UniProtKB:O14901	9068941	PMID:32814053	IntAct	PMID:32814053
Borcs5	Squirrel	protein binding	enables	ISO	UniProtKB:O95295 more ...	9068941	PMID:25898167	UniProt	PMID:25898167
Borcs5	Squirrel	protein binding	enables	ISO	UniProtKB:A0A1B0GWI1	9068941	PMID:32296183	IntAct	PMID:32296183
Borcs5	Squirrel	protein binding	enables	ISO	UniProtKB:Q9UHX1	9068941	PMID:16189514 and PMID:25416956	IntAct	PMID:16189514 and PMID:25416956

PMID:22301074	PMID:30032202

Borcs5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	95,078,900 - 95,178,702 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936587	4,806,113 - 4,906,411 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936587	4,806,537 - 4,906,301 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

BORCS5
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	12,357,078 - 12,471,233 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	12,357,078 - 12,471,233 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	12	12,510,012 - 12,624,167 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	12,401,322 - 12,511,105 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	12	12,401,321 - 12,511,105	NCBI
Celera	12	17,653,635 - 17,763,988 (+)	NCBI		Celera
Cytogenetic Map	12	p13.2	NCBI
HuRef	12	12,275,116 - 12,385,078 (+)	NCBI		HuRef
CHM1_1	12	12,475,001 - 12,584,853 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	12	12,226,205 - 12,340,409 (+)	NCBI		T2T-CHM13v2.0

Borcs5
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	134,616,475 - 134,688,147 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	134,616,473 - 134,688,150 (+)	Ensembl		GRCm39 Ensembl
GRCm38	6	134,639,512 - 134,711,184 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	134,639,510 - 134,711,187 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	134,589,530 - 134,661,202 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	134,606,674 - 134,676,863 (+)	NCBI		MGSCv36	mm8
Celera	6	137,587,872 - 137,663,447 (+)	NCBI		Celera
Cytogenetic Map	6	G1	NCBI
cM Map	6	65.77	NCBI

Borcs5
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	169,190,025 - 169,272,335 (+)	NCBI		GRCr8
mRatBN7.2	4	167,458,640 - 167,543,556 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	167,473,177 - 167,540,993 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	173,766,789 - 173,834,399 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	169,549,869 - 169,617,480 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	168,175,487 - 168,241,125 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	168,396,034 - 168,466,968 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	168,396,775 - 168,464,352 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	232,664,705 - 232,748,296 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	171,545,892 - 171,614,610 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	4	171,790,759 - 171,858,467 (+)	NCBI
Celera	4	156,072,931 - 156,138,582 (+)	NCBI		Celera
Cytogenetic Map	4	q43	NCBI

Borcs5
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955413	9,309,861 - 9,399,378 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955413	9,309,766 - 9,399,378 (+)	NCBI	ChiLan1.0	ChiLan1.0

BORCS5
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	17,823,289 - 17,950,691 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	17,820,048 - 17,950,110 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	12,380,071 - 12,488,735 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	12,749,085 - 12,857,043 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	12,749,104 - 12,857,043 (+)	Ensembl	panpan1.1		panPan2

BORCS5
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	27	33,839,345 - 33,949,056 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	27	33,837,318 - 33,934,896 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	27	12,496,789 - 12,606,369 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	27	34,146,425 - 34,256,421 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	27	34,144,391 - 34,242,102 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	27	34,039,090 - 34,148,751 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	27	33,988,879 - 34,098,859 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	27	12,228,438 - 12,340,603 (+)	NCBI		UU_Cfam_GSD_1.0

BORCS5
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	59,970,260 - 60,072,942 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	59,969,806 - 60,072,976 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

BORCS5
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	12,259,080 - 12,363,576 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	12,259,495 - 12,364,740 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666069	22,956,199 - 23,063,114 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Borcs5
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624752	25,382,796 - 25,504,989 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624752	25,418,206 - 25,504,658 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_005331910	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013361370	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021730769	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000023747 ⟹ ENSSTOP00000023083

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936587	4,806,113 - 4,906,411 (-)	Ensembl

RefSeq Acc Id:

XM_005331910 ⟹ XP_005331967

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404945	95,078,900 - 95,178,574 (-)	NCBI
SpeTri2.0	NW_004936587	4,806,537 - 4,906,230 (-)	NCBI

Sequence:

show sequence

TCGGGGTTCGAGCCAGTGAGTGAAAGCGGCGCCGCCCGCCAGTCGCAGACGCTGCAATGCTGGTGTCCCCCGCCTCTTCATTTAGGGCTCTCGGAAGGAAAGAGGGCGAGCAGCGTGTTTCCGCGCCG
CGCCTCTTCGCACGTCTGTTCCCCAAATAGGGCCCCTTATCCCGGCCGCCCGGGTTCCTGCGCGGACTGGGGGCATCTTCCCGGCTTCACCGCGGCGCCCAGACTGTCTAGCGTCCCCGTCCCGGTCC
CCAGTCCCTGCCCTGTCGCCGGAGCGGTCACTGCCCCGCCCGGCGTTCTTCCGCTGCCACCGCTGCTGGCACCATGGGCAGTGAGCAGAGCTCCGAGGCCGAGAGCCGACCCAACGATCTGAACTCCT
CAGTGAATCCTTCTCCAGCTAAGCATAGAGCCAAGATGGATGATATTGTGGTTGTAGCTCAGGGCTCTCAGGCCTCACGGAATGTCAGCAATGATCCTGATGTCATCAAGTTACAAGAGATTCCAACT
TTCCAGCCCCTTTTGAAAGGGCTTTTGAGTGGCCAGACTTCCCCAACAAATACCAAATTGGAGAAACTGGATTCTCAGCAGGTGTTGCAGCTGTGCCTCCGATATCAGGATCACCTGCACCAGTGTGC
AGAAGCTGTTGCTTTTGATCAGAATGCTTTGGTTAAACGAATCAAAGAGATGGATCTGTCTGTAGAAACCCTCTTTAGCTTCATGCAGGAACGCCAGAAAAGATATGCGAAATATGCTGAGCAGATCC
AGAAAGTCAACGAAATGTCTGCCATCCTCCGCCGCATACAGATGGGCATCGACCAGACGGTGCCGCTGATGGAAAGGCTCAACAGCATGCTGCCCGAGAGCGAGCGGCTAGAGCCCTTCAGCATGAAG
CCGGAGCGAGAGCTCAAGCTATAGCACTGCTGGTTCCCGCCTGCTAGGCTGCTTTTAGGAGGCAGAGAAGCCAGTAACCCAGAGGACATTTGAAGCCCAAGTCCTATGGTATGACCAAGGCCTGAAGC
TGGTACAAGGTCTGGGTCCTCACTGCAGTGGACACTGCATGGACTGCCACTGCCAGCATGGACTGTCTTTGCCCTTCTCCTTCCCTTGATGCGAATACCCTGTGTGAAACGAACAGAACTGATTCTTG
GTGATAACTGAAGTTGGAACATTACTAGAAATTGTTTTAAATGCTGCATGGAGAGTTGTTATTTTTTTTTATTGACAGTATATATATTCTAGTGTAGCTACTGGAGTGGAAACAGAAAAAAGGGAGAA
AAATTTTTTATGAAGCTATGTGTCTTCAATGCCCTTGTGAAATTTTACTCAGGCTCTGGGTTATGGGTTATAAATATGAAAAAAAATTAATCCA

hide sequence

RefSeq Acc Id:

XM_013361370 ⟹ XP_013216824

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404945	95,078,900 - 95,178,702 (-)	NCBI
SpeTri2.0	NW_004936587	4,806,537 - 4,906,301 (-)	NCBI

Sequence:

show sequence

CACCTCATAACCCGGAACTGAAGGCCTCGAGTCGCCGGAGCTGCCAATCCGCGTCCCGGAAGGAGCGAGCTTCGGGGTTCGAGCCATGAATCCTTCTCCAGCTAAGCATAGAGCCAAGATGGATGATA
TTGTGGTTGTAGCTCAGGGCTCTCAGGCCTCACGGAATGTCAGCAATGATCCTGATGTCATCAAGTTACAAGAGATTCCAACTTTCCAGCCCCTTTTGAAAGGGCTTTTGAGTGGCCAGACTTCCCCA
ACAAATACCAAATTGGAGAAACTGGATTCTCAGCAGGTGTTGCAGCTGTGCCTCCGATATCAGGATCACCTGCACCAGTGTGCAGAAGCTGTTGCTTTTGATCAGAATGCTTTGGTTAAACGAATCAA
AGAGATGGATCTGTCTGTAGAAACCCTCTTTAGCTTCATGCAGGAACGCCAGAAAAGATATGCGAAATATGCTGAGCAGATCCAGAAAGTCAACGAAATGTCTGCCATCCTCCGCCGCATACAGATGG
GCATCGACCAGACGGTGCCGCTGATGGAAAGGCTCAACAGCATGCTGCCCGAGAGCGAGCGGCTAGAGCCCTTCAGCATGAAGCCGGAGCGAGAGCTCAAGCTATAGCACTGCTGGTTCCCGCCTGCT
AGGCTGCTTTTAGGAGGCAGAGAAGCCAGTAACCCAGAGGACATTTGAAGCCCAAGTCCTATGGTATGACCAAGGCCTGAAGCTGGTACAAGGTCTGGGTCCTCACTGCAGTGGACACTGCATGGACT
GCCACTGCCAGCATGGACTGTCTTTGCCCTTCTCCTTCCCTTGATGCGAATACCCTGTGTGAAACGAACAGAACTGATTCTTGGTGATAACTGAAGTTGGAACATTACTAGAAATTGTTTTAAATGCT
GCATGGAGAGTTGTTATTTTTTTTTATTGACAGTATATATATTCTAGTGTAGCTACTGGAGTGGAAACAGAAAAAAGGGAGAAAAATTTTTTATGAAGCTATGTGTCTTCAATGCCCTTGTGAAATTT
TACTCAGGCTCTGGGTTATGGGTTATAAATATGAAAAAAAATTAATCCA

hide sequence


Protein RefSeqs	XP_005331967	(Get FASTA)	NCBI Sequence Viewer
	XP_013216824	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000023083.1
GenBank Protein	KAG3292372	(Get FASTA)	NCBI Sequence Viewer
	KAG3292373	(Get FASTA)	NCBI Sequence Viewer
	KAG3292374	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_013216824 ⟸ XM_013361370
- Peptide Label:	isoform X2
- Sequence:	show sequence MNPSPAKHRAKMDDIVVVAQGSQASRNVSNDPDVIKLQEIPTFQPLLKGLLSGQTSPTNTKLEKLDSQQVLQLCLRYQDHLHQCAEAVAFDQNALVKRIKEMDLSVETLFSFMQERQKRYAKYAEQIQ KVNEMSAILRRIQMGIDQTVPLMERLNSMLPESERLEPFSMKPERELKL hide sequence

RefSeq Acc Id:	XP_005331967 ⟸ XM_005331910
- Peptide Label:	isoform X1
- UniProtKB:	I3NFD6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGSEQSSEAESRPNDLNSSVNPSPAKHRAKMDDIVVVAQGSQASRNVSNDPDVIKLQEIPTFQP LLKGLLSGQTSPTNTKLEKLDSQQVLQLCLRYQDHLHQCAEAVAFDQNALVKRIKEMDLSVETLFSFMQERQKRYAKYAEQIQKVNEMSAILRRIQMGIDQTVPLMERLNSMLPESERLEPFSMKPER ELKL hide sequence

Ensembl Acc Id:

ENSSTOP00000023083 ⟸ ENSSTOT00000023747

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000026902	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000023747.2	UniProtKB/TrEMBL
InterPro	TBORCS5	UniProtKB/TrEMBL
NCBI Gene	Borcs5	ENTREZGENE
PANTHER	BLOC-1-RELATED COMPLEX SUBUNIT 5	UniProtKB/TrEMBL
	PTHR31634	UniProtKB/TrEMBL
Pfam	LOH1CR12	UniProtKB/TrEMBL
UniProt	I3NFD6	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - ClinVar