Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:vesicle targeting
go back to main search page
Accession:GO:0006903 term browser browse the term
Definition:The process in which vesicles are directed to specific destination membranes. Targeting involves coordinated interactions among cytoskeletal elements (microtubules or actin filaments), motor proteins, molecules at the vesicle membrane and target membrane surfaces, and vesicle cargo.



show annotations for term's descendants           Sort by:
vesicle targeting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 acts_upstream_of_or_within ISO MGI:4360696 (MGI:4461813|PMID:20592197) RGD PMID:20592197 MGI:4461813 NCBI chr 1:15,762,485...15,891,213
Ensembl chr 1:15,762,462...15,891,041
JBrowse link
G Chp1 calcineurin-like EF-hand protein 1 IDA RGD PMID:8626580 RGD:724726 NCBI chr 3:106,536,009...106,571,255
Ensembl chr 3:106,536,004...106,571,251
JBrowse link
G Clasp1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr13:29,493,554...29,715,151
Ensembl chr13:29,493,596...29,715,146
JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr 8:113,677,345...113,859,957
Ensembl chr 8:113,677,284...113,858,731
JBrowse link
G Exoc4 exocyst complex component 4 involved_in TAS PMID:12738960 UniProt PMID:12738960 RGD:8554028 NCBI chr 4:61,807,706...62,584,316
Ensembl chr 4:61,807,761...62,585,723
JBrowse link
G Map4k2 mitogen activated protein kinase kinase kinase kinase 2 involved_in ISO (MGI:83726|PMID:8643544) RGD PMID:8643544 MGI:83726 NCBI chr 1:203,645,098...203,660,782
Ensembl chr 1:203,645,153...203,660,331
JBrowse link
G Myh9 myosin, heavy chain 9 involved_in ISO (PMID:18504258) RGD PMID:18504258 NCBI chr 7:109,343,718...109,424,457
Ensembl chr 7:109,343,706...109,424,457
JBrowse link
G Stx2 syntaxin 2 TAS RGD PMID:10564647 PMID:8938452 RGD:1298910, RGD:728629 NCBI chr12:27,678,744...27,714,751
Ensembl chr12:27,689,819...27,714,751
JBrowse link
G Tmed10 transmembrane p24 trafficking protein 10 involved_in NAS PMID:8663407 RGD
HGNC-UCL
PMID:8663407 PMID:8663407 RGD:68840, RGD:68840 NCBI chr 6:104,991,843...105,026,705
Ensembl chr 6:104,991,838...105,026,753
JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 involved_in NAS PMID:8663407 HGNC-UCL PMID:8663407 RGD:68840 NCBI chr12:32,052,542...32,061,628
Ensembl chr12:32,052,543...32,071,903
JBrowse link
G Ykt6 YKT6 v-SNARE homolog involved_in ISS
ISO
PMID:9211930
(PMID:9211930)
RGD PMID:9211930 PMID:9211930 RGD:8553660 NCBI chr14:80,832,187...80,843,394
Ensembl chr14:80,832,187...80,843,385
JBrowse link
COPI coating of Golgi vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arfgap2 ADP-ribosylation factor GTPase activating protein 2 involved_in IBA
IEA
GO_REF:0000033
GO_REF:0000118
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 3:77,236,305...77,248,445
Ensembl chr 3:77,236,322...77,248,455
JBrowse link
G Arfgap3 ADP-ribosylation factor GTPase activating protein 3 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 7:114,432,873...114,479,206
Ensembl chr 7:114,432,873...114,479,208
JBrowse link
G Gbf1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 involved_in ISO (PMID:12047556), (PMID:17956946) RGD PMID:12047556 PMID:17956946 NCBI chr 1:245,018,535...245,147,052
Ensembl chr 1:245,018,568...245,147,042
JBrowse link
G Tmed9 transmembrane p24 trafficking protein 9 involved_in ISO
IBA
IEA
(PMID:18287528)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107
RGD
GO_Central
TreeGrafter
Ensembl
PMID:18287528 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr17:9,029,646...9,034,160
Ensembl chr17:9,029,646...9,034,176
JBrowse link
COPI-coated vesicle budding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tmed10 transmembrane p24 trafficking protein 10 involved_in ISO
IEA
ISS
(PMID:10052452)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:10052452 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:104,991,843...105,026,705
Ensembl chr 6:104,991,838...105,026,753
JBrowse link
COPII vesicle coating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cul3 cullin 3 involved_in ISO
IEA
ISS
(PMID:22358839)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:22358839 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:81,592,641...81,670,428
Ensembl chr 9:81,592,641...81,670,462
JBrowse link
G Klhl12 kelch-like family member 12 involved_in IEA
IBA
ISS
ISO
GO_REF:0000107
GO_REF:0000033
GO_REF:0000024
(PMID:22358839), (PMID:27716508)
Ensembl
GO_Central
UniProt
RGD
PMID:22358839 PMID:27716508 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr13:45,899,913...45,933,648
Ensembl chr13:45,899,928...45,933,643
JBrowse link
G Pdcd6 programmed cell death 6 involved_in ISO
ISS
(PMID:27716508)
GO_REF:0000024
RGD
UniProt
PMID:27716508 GO_REF:0000024 NCBI chr 1:28,966,518...28,982,188
Ensembl chr 1:28,966,518...28,982,189
JBrowse link
G Pef1 penta-EF hand domain containing 1 involved_in ISO
IBA
IEA
ISS
(PMID:27716508)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
Ensembl
UniProt
PMID:27716508 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:142,451,791...142,475,061
Ensembl chr 5:142,451,778...142,475,067
JBrowse link
G Ppa1 inorganic pyrophosphatase 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:29,590,733...29,617,711
Ensembl chr20:29,590,707...29,619,215
JBrowse link
G Preb prolactin regulatory element binding involved_in IDA PMID:11422940 UniProt PMID:11422940 RGD:11344947 NCBI chr 6:25,418,805...25,422,594
Ensembl chr 6:25,418,776...25,422,590
JBrowse link
G Sar1a secretion associated, Ras related GTPase 1A involved_in IEA
ISO
GO_REF:0000107
(PMID:23433038), (PMID:32358066)
Ensembl
RGD
PMID:23433038 PMID:32358066 GO_REF:0000107 NCBI chr20:29,623,529...29,635,935
Ensembl chr20:29,623,553...29,635,935
JBrowse link
G Sar1b secretion associated, Ras related GTPase 1B involved_in ISS
ISO
GO_REF:0000024
(PMID:23433038), (PMID:32358066)
UniProt
RGD
PMID:23433038 PMID:32358066 GO_REF:0000024 NCBI chr10:36,024,415...36,054,069
Ensembl chr10:36,024,382...36,054,066
JBrowse link
G Sec16a SEC16 homolog A, endoplasmic reticulum export factor involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:9,229,687...9,264,837
Ensembl chr 3:9,229,687...9,264,273
JBrowse link
G Sec16b SEC16 homolog B, endoplasmic reticulum export factor involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:69,665,757...69,727,199
Ensembl chr13:69,684,291...69,727,196
JBrowse link
G Tfg trafficking from ER to golgi regulator involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:43,885,542...43,911,976
Ensembl chr11:43,885,661...43,911,976
JBrowse link
regulation of COPII vesicle coating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mapk15 mitogen-activated protein kinase 15 involved_in ISO
IEA
ISS
(PMID:24618899)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:24618899 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:107,694,907...107,714,640
Ensembl chr 7:107,694,964...107,714,645
JBrowse link
G Ppa1 inorganic pyrophosphatase 1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:29,590,733...29,617,711
Ensembl chr20:29,590,707...29,619,215
JBrowse link
G Preb prolactin regulatory element binding involved_in IEA
ISO
IBA
GO_REF:0000104
(PMID:32358066)
GO_REF:0000033
UniProt
RGD
GO_Central
PMID:32358066 GO_REF:0000033 GO_REF:0000104 NCBI chr 6:25,418,805...25,422,594
Ensembl chr 6:25,418,776...25,422,590
JBrowse link
G Sar1a secretion associated, Ras related GTPase 1A involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr20:29,623,529...29,635,935
Ensembl chr20:29,623,553...29,635,935
JBrowse link
G Sar1b secretion associated, Ras related GTPase 1B involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr10:36,024,415...36,054,069
Ensembl chr10:36,024,382...36,054,066
JBrowse link
G Sec16a SEC16 homolog A, endoplasmic reticulum export factor involved_in ISO (PMID:17005010) RGD PMID:17005010 NCBI chr 3:9,229,687...9,264,837
Ensembl chr 3:9,229,687...9,264,273
JBrowse link
synaptic vesicle targeting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:3694190|PMID:10892652)
UniProt
Ensembl
RGD
PMID:10892652 GO_REF:0000024 GO_REF:0000107 MGI:3694190 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Pclo piccolo (presynaptic cytomatrix protein) involved_in NAS PMID:10707984 UniProt PMID:10707984 RGD:69383 NCBI chr 4:19,691,439...20,050,015
Ensembl chr 4:19,695,315...20,049,885
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO (MGI:2664026|PMID:12805290) RGD PMID:12805290 MGI:2664026 NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650
JBrowse link
G Scrib scribble planar cell polarity protein involved_in ISO (MGI:4365512|PMID:19458197) RGD PMID:19458197 MGI:4365512 NCBI chr 7:107,759,343...107,782,364
Ensembl chr 7:107,759,343...107,782,331
JBrowse link
vesicle targeting, to, from or within Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tmed10 transmembrane p24 trafficking protein 10 involved_in IEP
ISO
PMID:17101722
(MGI:3710424|PMID:17101722)
RGD PMID:17101722 PMID:17101722 MGI:3710424, RGD:2317246 NCBI chr 6:104,991,843...105,026,705
Ensembl chr 6:104,991,838...105,026,753
JBrowse link
vesicle targeting, trans-Golgi to endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1ar adaptor-related protein complex 1 associated regulatory protein involved_in ISO
IBA
(PMID:19706427)
GO_REF:0000033
RGD
GO_Central
PMID:19706427 GO_REF:0000033 NCBI chr 2:216,276,631...216,309,020
Ensembl chr 2:216,276,631...216,309,013
JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 involved_in ISO (PMID:15020712) RGD PMID:15020712 NCBI chr10:94,542,946...94,580,174
Ensembl chr10:94,542,946...94,579,846
JBrowse link
vesicle targeting, trans-Golgi to periciliary membrane compartment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cep19 centrosomal protein 19 involved_in ISS
ISO
IEA
IBA
GO_REF:0000024
(PMID:28659385)
GO_REF:0000107
GO_REF:0000033
UniProt
RGD
Ensembl
GO_Central
PMID:28659385 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr11:68,677,869...68,687,117
Ensembl chr11:68,677,871...68,687,022
JBrowse link
vesicle tethering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO MGI:1934018 (MGI:4868662|PMID:21037080) RGD PMID:21037080 MGI:4868662 NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972
JBrowse link
vesicle tethering involved in exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exoc4 exocyst complex component 4 involved_in IEA GO_REF:0000002
GO_REF:0000104
InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr 4:61,807,706...62,584,316
Ensembl chr 4:61,807,761...62,585,723
JBrowse link
G Exoc6 exocyst complex component 6 involved_in IEA GO_REF:0000104
GO_REF:0000002
UniProt
InterPro
GO_REF:0000002 GO_REF:0000104 NCBI chr 1:235,314,612...235,457,824
Ensembl chr 1:235,300,369...235,457,015
JBrowse link
G Exoc6b exocyst complex component 6B involved_in IEA GO_REF:0000002
GO_REF:0000104
InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr 4:117,094,741...117,550,221
Ensembl chr 4:117,094,741...117,550,180
JBrowse link
vesicle tethering to endoplasmic reticulum term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stard3 StAR-related lipid transfer domain containing 3 involved_in ISO
IBA
(PMID:24105263), (PMID:28377464)
GO_REF:0000033
RGD
GO_Central
PMID:24105263 PMID:28377464 GO_REF:0000033 NCBI chr10:83,357,329...83,379,873
Ensembl chr10:83,357,359...83,550,976
JBrowse link
G Stard3nl STARD3 N-terminal like involved_in ISO
IBA
(PMID:24105263)
GO_REF:0000033
RGD
GO_Central
PMID:24105263 GO_REF:0000033 NCBI chr17:45,583,278...45,617,226
Ensembl chr17:45,583,266...45,617,226
JBrowse link
vesicle tethering to Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C10h17orf75 similar to human chromosome 17 open reading frame 75 involved_in ISO
IBA
(PMID:29426865)
GO_REF:0000033
RGD
GO_Central
PMID:29426865 GO_REF:0000033 NCBI chr10:65,360,924...65,373,864
Ensembl chr10:65,360,924...65,373,864
JBrowse link
G Fam91a1 family with sequence similarity 91, member A1 involved_in ISO
IBA
(PMID:29426865)
GO_REF:0000033
RGD
GO_Central
PMID:29426865 GO_REF:0000033 NCBI chr 7:89,969,558...90,007,546
Ensembl chr 7:89,969,605...90,007,556
JBrowse link
G Tbc1d23 TBC1 domain family, member 23 involved_in ISO
IBA
(PMID:29426865)
GO_REF:0000033
RGD
GO_Central
PMID:29426865 GO_REF:0000033 NCBI chr11:43,303,355...43,361,507
Ensembl chr11:43,303,355...43,361,503
JBrowse link
G Trip11 thyroid hormone receptor interactor 11 involved_in ISO (PMID:25473115) RGD PMID:25473115 NCBI chr 6:120,995,242...121,067,693
Ensembl chr 6:120,998,733...121,067,781
JBrowse link
G Wdr11 WD repeat domain 11 involved_in ISO (PMID:29426865) RGD PMID:29426865 NCBI chr 1:184,165,260...184,210,834
Ensembl chr 1:184,165,571...184,210,846
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20325
    cellular process 18797
      vesicle targeting 44
        contractile vacuole tethering involved in discharge 0
        synaptic vesicle targeting 4
        vesicle targeting to fusome 0
        vesicle targeting, plasma membrane to endosome + 0
        vesicle targeting, to, from or within Golgi + 20
        vesicle tethering + 11
Path 2
Term Annotations click to browse term
  biological_process 20325
    localization 5717
      establishment of localization 4993
        establishment of localization in cell 2166
          establishment of vesicle localization 190
            vesicle targeting 44
              contractile vacuole tethering involved in discharge 0
              synaptic vesicle targeting 4
              vesicle targeting to fusome 0
              vesicle targeting, plasma membrane to endosome + 0
              vesicle targeting, to, from or within Golgi + 20
              vesicle tethering + 11
paths to the root