Mylk2 (myosin light chain kinase 2) - Rat Genome Database

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Gene: Mylk2 (myosin light chain kinase 2) Ictidomys tridecemlineatus
Analyze
Symbol: Mylk2
Name: myosin light chain kinase 2
RGD ID: 12717364
Description: ENCODES a protein that exhibits myosin light chain binding (ortholog); myosin light chain kinase activity (ortholog); INVOLVED IN muscle contraction (ortholog); neuromuscular synaptic transmission (ortholog); positive regulation of fast-twitch skeletal muscle fiber contraction (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); Diabetic Cardiomyopathies (ortholog); dilated cardiomyopathy 1G (ortholog); FOUND IN dendrite (ortholog); dendritic spine (ortholog); neuronal cell body (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: myosin light chain kinase 2, skeletal/cardiac muscle
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640170,351,409 - 170,364,586 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648518,782,887 - 18,795,948 (+)EnsemblSpeTri2.0
SpeTri2.0NW_00493648518,782,890 - 18,795,942 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Comparative Map Data
Mylk2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640170,351,409 - 170,364,586 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648518,782,887 - 18,795,948 (+)EnsemblSpeTri2.0
SpeTri2.0NW_00493648518,782,890 - 18,795,942 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MYLK2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382031,819,356 - 31,834,684 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl2031,819,308 - 31,834,689 (+)EnsemblGRCh38hg38GRCh38
GRCh372030,407,159 - 30,422,487 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362029,871,045 - 29,886,153 (+)NCBINCBI36Build 36hg18NCBI36
Build 342029,871,044 - 29,886,153NCBI
Celera2027,163,525 - 27,178,847 (+)NCBICelera
Cytogenetic Map20q11.21NCBI
HuRef2027,196,099 - 27,211,421 (+)NCBIHuRef
CHM1_12030,311,075 - 30,326,398 (+)NCBICHM1_1
T2T-CHM13v2.02033,543,964 - 33,559,292 (+)NCBIT2T-CHM13v2.0
Mylk2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392152,753,265 - 152,764,985 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2152,753,272 - 152,764,988 (+)EnsemblGRCm39 Ensembl
GRCm382152,911,281 - 152,923,065 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2152,911,352 - 152,923,068 (+)EnsemblGRCm38mm10GRCm38
MGSCv372152,737,088 - 152,748,801 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362152,602,793 - 152,614,506 (+)NCBIMGSCv36mm8
Celera2158,729,121 - 158,740,905 (+)NCBICelera
Cytogenetic Map2H1NCBI
Mylk2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.23141,376,450 - 141,388,357 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3141,376,691 - 141,387,728 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3145,281,467 - 145,293,306 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.03153,865,278 - 153,877,118 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.03151,604,816 - 151,616,654 (+)NCBIRnor_WKY
Rnor_6.03148,386,185 - 148,397,851 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3148,386,189 - 148,399,501 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03154,789,177 - 154,800,843 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43143,252,183 - 143,263,849 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13143,157,804 - 143,169,471 (+)NCBI
Celera3140,125,983 - 140,137,649 (+)NCBICelera
Cytogenetic Map3q41NCBI
Mylk2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542229,141,348 - 29,154,927 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542229,141,699 - 29,154,927 (-)NCBIChiLan1.0ChiLan1.0
MYLK2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan12037,498,051 - 37,524,340 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02028,113,024 - 28,128,142 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12029,243,391 - 29,258,508 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2029,243,391 - 29,258,508 (+)Ensemblpanpan1.1panPan2
MYLK2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12421,284,309 - 21,297,889 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2421,284,352 - 21,309,363 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2420,931,709 - 20,945,281 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02421,971,185 - 21,984,754 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2421,971,219 - 21,984,750 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12421,249,626 - 21,263,199 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02421,354,931 - 21,368,484 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02421,785,552 - 21,799,121 (+)NCBIUU_Cfam_GSD_1.0
MYLK2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1735,499,887 - 35,513,093 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11735,499,828 - 35,513,096 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21740,365,367 - 40,378,618 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MYLK2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1236,207,013 - 36,223,292 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl236,207,901 - 36,223,307 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605090,691,023 - 90,706,346 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mylk2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624741680,016 - 693,908 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624741680,230 - 693,895 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSSTOT00000007709   ⟹   ENSSTOP00000006896
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493648518,782,887 - 18,795,948 (+)Ensembl
RefSeq Acc Id: XM_005320580   ⟹   XP_005320637
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024408640170,351,413 - 170,364,586 (+)NCBI
SpeTri2.0NW_00493648518,782,890 - 18,795,942 (+)NCBI
Sequence:
RefSeq Acc Id: XR_005729640
RefSeq Status:
Type: NON-CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024408640170,351,409 - 170,362,595 (+)NCBI
Protein Sequences
Protein RefSeqs XP_005320637 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein KAG3263056 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005320637   ⟸   XM_005320580
- Sequence:
RefSeq Acc Id: ENSSTOP00000006896   ⟸   ENSSTOT00000007709
Protein Domains
Protein kinase


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000007690 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSSTOP00000006896.3 UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000007709.3 UniProtKB/TrEMBL
Gene3D-CATH Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro Kinase-like_dom_sf UniProtKB/TrEMBL
  MLCK2_STKc UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/TrEMBL
NCBI Gene Mylk2 ENTREZGENE
PANTHER DEATH-ASSOCIATED PROTEIN KINASE 2 UniProtKB/TrEMBL
  SERINE/THREONINE-PROTEIN KINASE 17 UniProtKB/TrEMBL
Pfam Pkinase UniProtKB/TrEMBL
PROSITE PROTEIN_KINASE_ATP UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/TrEMBL
SMART S_TKc UniProtKB/TrEMBL
Superfamily-SCOP SSF56112 UniProtKB/TrEMBL
UniProt I3MA94_ICTTR UniProtKB/TrEMBL