Btbd8 (BTB domain containing 8) - Rat Genome Database

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Gene: Btbd8 (BTB domain containing 8) Ictidomys tridecemlineatus
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Symbol: Btbd8
Name: BTB domain containing 8
RGD ID: 12701658
Description: INVOLVED IN neuron projection development (ortholog); synaptic vesicle budding from endosome (ortholog); synaptic vesicle endocytosis (ortholog); FOUND IN AP-2 adaptor complex (ortholog); axon (ortholog); cell body (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: BTB (POZ) domain containing 8; BTB/POZ domain-containing protein 8; BTB/POZ domain-containing protein 8, transcript variant X1; BTB/POZ domain-containing protein 8, transcript variant X2; BTB/POZ domain-containing protein 8, transcript variant X3; Kiaa1107; KIAA1107 ortholog; LOC101959342; uncharacterized protein KIAA1107; uncharacterized protein KIAA1107 homolog
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405058101,970,548 - 102,048,694 (+)NCBI
SpeTri2.0NW_0049365376,899,271 - 6,977,420 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
Btbd8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405058101,970,548 - 102,048,694 (+)NCBI
SpeTri2.0NW_0049365376,899,271 - 6,977,420 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BTBD8
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl192,080,305 - 92,184,725 (+)EnsemblGRCh38hg38GRCh38
GRCh38192,080,345 - 92,188,509 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37192,545,902 - 92,650,280 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36192,318,481 - 92,385,985 (+)NCBINCBI36hg18NCBI36
Build 34192,257,913 - 92,325,414NCBI
Celera190,792,299 - 90,859,815 (+)NCBI
Cytogenetic Map1p22.1NCBI
HuRef190,666,116 - 90,733,635 (+)NCBIHuRef
CHM1_1192,660,686 - 92,728,226 (+)NCBICHM1_1
Btbd8
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395107,585,796 - 107,660,426 (+)NCBIGRCm39mm39
GRCm39 Ensembl5107,585,863 - 107,659,073 (+)Ensembl
GRCm385107,437,930 - 107,512,560 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5107,437,997 - 107,511,207 (+)EnsemblGRCm38mm10GRCm38
MGSCv375107,867,016 - 107,920,615 (+)NCBIGRCm37mm9NCBIm37
MGSCv365107,678,299 - 107,731,898 (+)NCBImm8
Celera5104,551,274 - 104,604,857 (+)NCBICelera
Cytogenetic Map5FNCBI
Btbd8
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2142,265,189 - 2,338,426 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl142,266,454 - 2,334,393 (-)Ensembl
Rnor_6.0143,282,422 - 3,351,740 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl143,284,089 - 3,300,200 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0143,285,858 - 3,355,200 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4142,846,003 - 2,897,088 (-)NCBIRGSC3.4rn4RGSC3.4
Celera142,293,640 - 2,351,955 (-)NCBICelera
Cytogenetic Map14p22NCBI
BTBD8
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1193,483,702 - 93,587,229 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl193,569,680 - 93,587,229 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0194,739,780 - 94,843,172 (+)NCBIMhudiblu_PPA_v0panPan3
BTBD8
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1656,756,682 - 56,849,849 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl656,698,320 - 56,900,173 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha659,460,913 - 59,555,751 (-)NCBI
ROS_Cfam_1.0657,139,502 - 57,232,357 (-)NCBI
ROS_Cfam_1.0 Ensembl657,139,503 - 57,232,298 (-)Ensembl
UMICH_Zoey_3.1656,813,063 - 56,909,419 (-)NCBI
UNSW_CanFamBas_1.0656,791,209 - 56,885,794 (-)NCBI
UU_Cfam_GSD_1.0657,252,135 - 57,348,507 (-)NCBI
KIAA1107
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl4124,858,099 - 124,950,427 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.14124,859,271 - 124,950,420 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
BTBD8
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12041,181,673 - 41,216,768 (-)NCBIChlSab1.1chlSab2
ChlSab1.12041,181,673 - 41,216,768 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl2041,181,605 - 41,216,730 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603376,774,474 - 76,924,716 (+)NCBIVero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_005327733   ⟹   XP_005327790
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405058101,970,548 - 102,048,694 (+)NCBI
SpeTri2.0NW_0049365376,899,271 - 6,977,370 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021728017   ⟹   XP_021583692
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_0049365376,908,076 - 6,977,414 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021728018   ⟹   XP_021583693
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_0049365376,906,760 - 6,977,420 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005327790 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein KAG3283589 (Get FASTA)   NCBI Sequence Viewer  
  KAG3283590 (Get FASTA)   NCBI Sequence Viewer  
  KAG3283591 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005327790   ⟸   XM_005327733
- Sequence:
RefSeq Acc Id: XP_021583693   ⟸   XM_021728018
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_021583692   ⟸   XM_021728017
- Peptide Label: isoform X2
- Sequence:
Protein Domains
DUF4596


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000027118 UniProtKB/TrEMBL
Ensembl Protein ENSSTOP00000022867 UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000029904 UniProtKB/TrEMBL
InterPro DUF4596 UniProtKB/TrEMBL
  KIAA1107 UniProtKB/TrEMBL
NCBI Gene Kiaa1107 ENTREZGENE
PANTHER PTHR22427:SF2 UniProtKB/TrEMBL
Pfam DUF4596 UniProtKB/TrEMBL
UniProt I3NES0_ICTTR UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-26 Btbd8  BTB domain containing 8  LOC101959342  BTB/POZ domain-containing protein 8  Symbol and/or name change 5135510 APPROVED
2017-07-13 LOC101959342  BTB/POZ domain-containing protein 8  Kiaa1107  KIAA1107 ortholog  Symbol and/or name change 5135510 APPROVED