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ONTOLOGY REPORT - ANNOTATIONS

Term:organic acid biosynthetic process
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Accession:GO:0016053 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of organic acids, any acidic compound containing carbon in covalent linkage.
Synonyms:exact_synonym: organic acid anabolism;   organic acid biosynthesis;   organic acid formation;   organic acid synthesis


show annotations for term's descendants           Sort by:
'de novo' L-methionine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHMT betaine--homocysteine S-methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:36,181,183...36,201,833
Ensembl chr 5:36,670,854...36,728,993 		JBrowse link
10-formyltetrahydrofolate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:44,969,573...45,041,296
Ensembl chr14:63,223,484...63,293,881 		JBrowse link
G MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:148,679,587...148,919,002
Ensembl chr 6:153,390,498...153,619,884 		JBrowse link
2-oxobutyrate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G THNSL2 threonine synthase like 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr2A:87,303,022...87,319,494
Ensembl chr2A:89,212,442...89,228,446 		JBrowse link
9-cis-retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 acts_upstream_of_or_within ISO (PMID:11876656) MGI PMID:11876656 NCBI chr 9:51,737,305...51,916,648
Ensembl chr 9:71,680,890...71,814,085 		JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11876656) Ensembl
MGI		 PMID:11876656 GO_REF:0000107 NCBI chr15:36,925,443...37,038,288
Ensembl chr15:55,237,101...55,557,168 		JBrowse link
G ALDH8A1 aldehyde dehydrogenase 8 family member A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11876656) Ensembl
MGI		 PMID:11876656 GO_REF:0000107 NCBI chr 6:132,685,904...132,732,194
Ensembl chr 6:136,782,957...136,815,611 		JBrowse link
G CYP1A1 cytochrome P450 family 1 subfamily A member 1 ISO 9-cis- and all-trans-retinoic acid synthesized from 9-cis- and all-trans-retinal RGD PMID:8765131 RGD:2306683 NCBI chr15:53,664,968...53,672,277
Ensembl chr15:73,284,566...73,290,636 		JBrowse link
G DHRS9 dehydrogenase/reductase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:56,347,489...56,376,463
Ensembl chr2B:173,811,932...173,842,816 		JBrowse link
G RDH16 retinol dehydrogenase 16 acts_upstream_of_or_within ISO (PMID:11876656) MGI PMID:11876656 NCBI chr12:31,958,385...31,966,319
Ensembl chr12:32,212,746...32,219,624 		JBrowse link
acetate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACSS1 acyl-CoA synthetase short chain family member 1 ISO RGD PMID:4334748 RGD:2317572 NCBI chr20:24,946,629...25,001,311
Ensembl chr20:25,293,511...25,349,017 		JBrowse link
G ACSS2 acyl-CoA synthetase short chain family member 2 ISO RGD PMID:4334748 RGD:2317572 NCBI chr20:31,205,104...31,256,263
Ensembl chr20:32,329,721...32,380,526 		JBrowse link
arginine biosynthetic process via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASL argininosuccinate lyase involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 7:59,908,648...59,948,822
Ensembl chr 7:73,142,842...73,157,472
Ensembl chr 7:73,142,842...73,157,472 		JBrowse link
G OTC ornithine transcarbamylase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:30,796,828...30,868,144
Ensembl chr  X:38,505,232...38,575,819 		JBrowse link
asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASNS asparagine synthetase (glutamine-hydrolyzing) involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:2573597) RGD
TreeGrafter
InterPro
UniProt
Ensembl
MGI		 PMID:2573597 PMID:2887559 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 RGD:2316002 NCBI chr 7:89,811,363...89,831,733
Ensembl chr 7:103,392,540...103,413,046 		JBrowse link
G ASNSD1 asparagine synthetase domain containing 1 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr2B:76,967,753...76,977,139
Ensembl chr2B:194,887,530...194,896,927 		JBrowse link
G LOC100981233 asparagine synthetase [glutamine-hydrolyzing]-like involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000118 NCBI chr 8:43,010,778...43,045,817 JBrowse link
aspartate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:4193185) Ensembl
TreeGrafter
MGI		 PMID:4193185 GO_REF:0000107 GO_REF:0000118 NCBI chr10:96,012,345...96,046,266
Ensembl chr10:99,506,205...99,540,178 		JBrowse link
G GOT1L1 glutamic-oxaloacetic transaminase 1 like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:37,234,593...37,241,464
Ensembl chr 8:34,412,465...34,418,343 		JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within ISO (PMID:4193185) MGI PMID:4193185 NCBI chr16:38,995,770...39,022,750
Ensembl chr16:58,120,781...58,147,378 		JBrowse link
beta-alanine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase involved_in IEA UniProt GO_REF:0000041 NCBI chr 1:99,736,145...100,576,663
Ensembl chr 1:98,457,934...99,300,100 		JBrowse link
beta-alanine biosynthetic process via 3-ureidopropionate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPB1 beta-ureidopropionase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr22:5,300,686...5,332,735
Ensembl chr22:22,166,370...22,197,360 		JBrowse link
bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD3 ATP binding cassette subfamily D member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:97,079,326...97,179,886
Ensembl chr 1:95,808,027...95,907,864 		JBrowse link
G ACOX2 acyl-CoA oxidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:58,442,532...58,474,601
Ensembl chr 3:59,852,771...59,884,548 		JBrowse link
G AKR1D1 aldo-keto reductase family 1 member D1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:7508385) MGI
InterPro
Ensembl		 PMID:7508385 GO_REF:0000002 GO_REF:0000107 NCBI chr 7:130,023,017...130,076,397
Ensembl chr 7:142,525,467...142,571,331 		JBrowse link
G AMACR alpha-methylacyl-CoA racemase ISO RGD PMID:11964182 RGD:704372 NCBI chr 5:76,336,631...76,358,724
Ensembl chr 5:81,687,891...81,742,003 		JBrowse link
G BAAT bile acid-CoA:amino acid N-acyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:72,568,002...72,593,179
Ensembl chr 9:100,563,040...100,586,189 		JBrowse link
G CYP27A1 cytochrome P450 family 27 subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:106,042,235...106,076,840
Ensembl chr2B:224,637,238...224,671,474 		JBrowse link
G CYP39A1 cytochrome P450 family 39 subfamily A member 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:46,132,584...46,235,578
Ensembl chr 6:47,404,969...47,507,600 		JBrowse link
G CYP7A1 cytochrome P450 family 7 subfamily A member 1 involved_in IEA Ensembl
TreeGrafter
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:54,942,509...54,952,500
Ensembl chr 8:56,593,799...56,604,037 		JBrowse link
G CYP7B1 cytochrome P450 family 7 subfamily B member 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:61,135,307...61,335,838
Ensembl chr 8:62,806,637...63,006,386 		JBrowse link
G CYP8B1 cytochrome P450 family 8 subfamily B member 1 involved_in ISO (PMID:14643796)
(PMID:12393855)		 UniProt PMID:12393855 PMID:14643796 NCBI chr 3:42,775,679...42,779,440
Ensembl chr 3:43,824,423...43,842,716 		JBrowse link
G ERRFI1 ERBB receptor feedback inhibitor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22912762) Ensembl
MGI		 PMID:22912762 GO_REF:0000107 NCBI chr 1:6,771,619...6,786,217
Ensembl chr 1:8,011,848...8,033,674 		JBrowse link
G HNF1A HNF1 homeobox A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11279518) Ensembl
MGI		 PMID:11279518 GO_REF:0000107 NCBI chr12:118,562,308...118,584,596
Ensembl chr12:121,932,671...121,955,911 		JBrowse link
G HSD17B10 hydroxysteroid 17-beta dehydrogenase 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:45,645,849...45,649,039
Ensembl chr  X:53,754,164...53,757,643 		JBrowse link
G PEX2 peroxisomal biogenesis factor 2 acts_upstream_of_or_within ISO (PMID:14673138) MGI PMID:14673138 NCBI chr 8:73,508,349...73,526,560
Ensembl chr 8:75,146,255...75,147,172 		JBrowse link
G SLC27A2 solute carrier family 27 member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:29,130,262...29,182,752
Ensembl chr15:47,452,227...47,505,066 		JBrowse link
G SLC27A5 solute carrier family 27 member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:55,507,455...55,520,448
Ensembl chr19:64,329,567...64,342,630 		JBrowse link
G STAR steroidogenic acute regulatory protein ISO RGD PMID:15382124 RGD:1600081 NCBI chr 8:37,446,334...37,454,102
Ensembl chr 8:34,623,201...34,629,544 		JBrowse link
branched-chain amino acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:61,364,154...61,500,827
Ensembl chr12:63,978,116...64,107,463 		JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:45,793,433...45,809,546
Ensembl chr19:54,945,157...54,962,887 		JBrowse link
carnosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARNS1 carnosine synthase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:20097752), (PMID:24891507) MGI
TreeGrafter
Ensembl
InterPro		 PMID:20097752 PMID:24891507 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr11:62,774,027...62,784,066
Ensembl chr11:66,085,594...66,097,970 		JBrowse link
citrulline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH18A1 aldehyde dehydrogenase 18 family member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:92,216,639...92,267,525
Ensembl chr10:95,723,099...95,774,095 		JBrowse link
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:7053379 GO_REF:0000118 RGD:10755426 NCBI chr2A:27,218,699...27,245,156
Ensembl chr2A:27,306,527...27,332,804 		JBrowse link
G OTC ornithine transcarbamylase involved_in ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:9472964 GO_REF:0000107 GO_REF:0000118 RGD:4144071 NCBI chr  X:30,796,828...30,868,144
Ensembl chr  X:38,505,232...38,575,819 		JBrowse link
creatine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAMT guanidinoacetate N-methyltransferase involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:15028668) RGD
TreeGrafter
MGI
UniProt
Ensembl		 PMID:15028668 PMID:15533043 GO_REF:0000041 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 RGD:1359081 Ensembl chr19:1,371,312...1,375,461 JBrowse link
G GATM glycine amidinotransferase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9218780) MGI
TreeGrafter
UniProt
Ensembl		 PMID:9218780 GO_REF:0000041 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr15:24,309,045...24,326,673
Ensembl chr15:42,639,597...42,657,209 		JBrowse link
cyclooxygenase pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BDKRB1 bradykinin receptor B1 involved_in ISO (PMID:23846981) AgBase PMID:23846981 NCBI chr14:76,885,923...76,894,456 JBrowse link
G LOC100988585 transmembrane protein 220 acts_upstream_of_or_within ISO (PMID:28973536) MGI PMID:28973536 NCBI chr17:40,923,397...40,973,382
Ensembl chr17:45,703,642...45,720,520
Ensembl chr17:45,703,642...45,720,520 		JBrowse link
G PTGS1 prostaglandin-endoperoxide synthase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:93,495,365...93,517,557
Ensembl chr 9:121,837,095...121,859,283 		JBrowse link
G PTGS2 prostaglandin-endoperoxide synthase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:1419907) Ensembl
TreeGrafter
MGI		 PMID:1419907 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:162,205,534...162,214,130
Ensembl chr 1:166,355,845...166,364,519 		JBrowse link
G SPHK1 sphingosine kinase 1 ISO RGD PMID:18723875 RGD:2311353 NCBI chr17:70,331,370...70,336,043
Ensembl chr17:75,883,329...75,886,481 		JBrowse link
cysteine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15030387) UniProt
MGI
Ensembl		 PMID:15030387 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chr21:29,361,519...29,385,610
Ensembl chr21:42,670,530...42,690,932 		JBrowse link
G CTH cystathionine gamma-lyase involved_in IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chr 1:69,646,608...69,674,301
Ensembl chr 1:71,629,333...71,677,666 		JBrowse link
G GGT1 gamma-glutamyltransferase 1 involved_in ISO (PMID:12468440) UniProt PMID:12468440 NCBI chr22:5,424,334...5,469,705 JBrowse link
cysteine biosynthetic process from serine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr21:29,361,519...29,385,610
Ensembl chr21:42,670,530...42,690,932 		JBrowse link
cysteine biosynthetic process via cystathionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr21:29,361,519...29,385,610
Ensembl chr21:42,670,530...42,690,932 		JBrowse link
G CTH cystathionine gamma-lyase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:69,646,608...69,674,301
Ensembl chr 1:71,629,333...71,677,666 		JBrowse link
D-serine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SRR serine racemase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10557334), (PMID:11054547), (PMID:12021263), (PMID:15710237) Ensembl
TreeGrafter
MGI		 PMID:10557334 PMID:11054547 PMID:12021263 PMID:15710237 GO_REF:0000107 GO_REF:0000118 NCBI chr17:2,294,440...2,316,244
Ensembl chr17:2,182,839...2,200,704 		JBrowse link
dermatan sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHST12 carbohydrate sulfotransferase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:2,666,062...2,697,292
Ensembl chr 7:2,792,210...2,793,454 		JBrowse link
G CHST14 carbohydrate sulfotransferase 14 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11470797) MGI
Ensembl		 PMID:11470797 GO_REF:0000107 NCBI chr15:19,407,477...19,409,645
Ensembl chr15:37,660,621...37,661,622 		JBrowse link
G DSE dermatan sulfate epimerase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:114,173,641...114,246,129
Ensembl chr 6:118,347,786...118,386,193 		JBrowse link
G UST uronyl 2-sulfotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:146,562,541...146,895,450
Ensembl chr 6:151,270,505...151,597,779 		JBrowse link
fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD3 ATP binding cassette subfamily D member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:97,079,326...97,179,886
Ensembl chr 1:95,808,027...95,907,864 		JBrowse link
G ACACA acetyl-CoA carboxylase alpha involved_in ISO
IEA		 RGD
TreeGrafter
UniProt
Ensembl
InterPro		 PMID:11735100 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 RGD:2317316 NCBI chr17:19,670,114...19,998,903
Ensembl chr17:19,969,205...20,297,651 		JBrowse link
G ACACB acetyl-CoA carboxylase beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17210641) InterPro
TreeGrafter
MGI
UniProt
Ensembl		 PMID:17210641 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr12:106,692,668...106,845,490
Ensembl chr12:110,086,374...110,239,847 		JBrowse link
G ACLY ATP citrate lyase involved_in ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:11735100 GO_REF:0000107 GO_REF:0000118 RGD:2317316 NCBI chr17:15,385,335...15,447,269
Ensembl chr17:15,615,994...15,664,800 		JBrowse link
G ACSF3 acyl-CoA synthetase family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:69,842,709...69,907,075
Ensembl chr16:89,467,997...89,523,825 		JBrowse link
G ACSL3 acyl-CoA synthetase long chain family member 3 ISO RGD PMID:8663269 RGD:70280 NCBI chr2B:110,100,210...110,181,277
Ensembl chr2B:228,706,142...228,759,882 		JBrowse link
G ACSM3 acyl-CoA synthetase medium chain family member 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11470804) MGI
TreeGrafter		 PMID:11470804 GO_REF:0000118 NCBI chr16:17,611,715...17,644,587
Ensembl chr16:20,796,425...20,829,315 		JBrowse link
G ACSM4 acyl-CoA synthetase medium chain family member 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:7,448,372...7,474,634
Ensembl chr12:7,613,474...7,637,536 		JBrowse link
G ACSM6 acyl-CoA synthetase medium chain family member 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:91,800,561...91,834,123
Ensembl chr10:95,309,060...95,341,767 		JBrowse link
G BRCA1 BRCA1 DNA repair associated involved_in IEA UniProt GO_REF:0000043 NCBI chr17:14,197,946...14,279,064
Ensembl chr17:14,428,526...14,506,815 		JBrowse link
G CBR4 carbonyl reductase 4 involved_in IEA Ensembl
UniProt
TreeGrafter		 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:161,103,477...161,235,840
Ensembl chr 4:173,282,162...173,309,905 		JBrowse link
G DEGS1 delta 4-desaturase, sphingolipid 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:199,651,712...199,661,848
Ensembl chr 1:204,659,389...204,668,901 		JBrowse link
G ELOVL1 ELOVL fatty acid elongase 1 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chr 1:42,664,818...42,686,475
Ensembl chr 1:44,044,693...44,048,769 		JBrowse link
G ELOVL2 ELOVL fatty acid elongase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:10,820,972...10,884,609
Ensembl chr 6:11,097,903...11,127,911 		JBrowse link
G ELOVL3 ELOVL fatty acid elongase 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr10:98,788,505...98,833,146
Ensembl chr10:102,297,291...102,300,594 		JBrowse link
G ELOVL4 ELOVL fatty acid elongase 4 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chr 6:77,798,058...77,830,840
Ensembl chr 6:81,068,882...81,102,050 		JBrowse link
G ELOVL5 ELOVL fatty acid elongase 5 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:52,822,038...52,902,122
Ensembl chr 6:54,451,887...54,485,878 		JBrowse link
G ELOVL6 ELOVL fatty acid elongase 6 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chr 4:102,545,815...102,695,536
Ensembl chr 4:113,110,466...113,260,444 		JBrowse link
G ELOVL7 ELOVL fatty acid elongase 7 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chr 5:53,156,518...53,248,839
Ensembl chr 5:54,853,330...54,888,930 		JBrowse link
G FA2H fatty acid 2-hydroxylase involved_in IEA UniProt GO_REF:0000043 NCBI chr16:55,278,769...55,340,332
Ensembl chr16:74,632,179...74,693,710 		JBrowse link
G FADS1 fatty acid desaturase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr11:57,101,553...57,116,243
Ensembl chr11:60,462,420...60,476,798 		JBrowse link
G FADS2 fatty acid desaturase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr11:57,192,881...57,232,574
Ensembl chr11:60,476,082...60,591,649 		JBrowse link
G FADS3 fatty acid desaturase 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr11:57,238,616...57,257,331
Ensembl chr11:60,597,527...60,615,519 		JBrowse link
G FADS6 fatty acid desaturase 6 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:68,822,323...68,839,574
Ensembl chr17:74,379,156...74,395,676 		JBrowse link
G FASN fatty acid synthase involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:22331133) RGD
TreeGrafter
MGI
UniProt
InterPro
Ensembl		 PMID:15715522 PMID:22331133 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 RGD:2317317 NCBI chr17:76,483,108...76,503,148
Ensembl chr17:82,187,516...82,205,647 		JBrowse link
G HACD1 3-hydroxyacyl-CoA dehydratase 1 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chr10:17,911,158...17,940,075
Ensembl chr10:18,183,125...18,209,361 		JBrowse link
G HACD2 3-hydroxyacyl-CoA dehydratase 2 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chr 3:120,588,195...120,684,177 JBrowse link
G HACD3 3-hydroxyacyl-CoA dehydratase 3 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chr15:44,473,542...44,520,885
Ensembl chr15:62,752,762...62,799,950 		JBrowse link
G HACD4 3-hydroxyacyl-CoA dehydratase 4 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chr 9:20,811,857...20,839,900
Ensembl chr 9:21,470,670...21,495,350 		JBrowse link
G HNF1A HNF1 homeobox A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10852923) Ensembl
MGI		 PMID:10852923 GO_REF:0000107 NCBI chr12:118,562,308...118,584,596
Ensembl chr12:121,932,671...121,955,911 		JBrowse link
G HSD17B8 hydroxysteroid 17-beta dehydrogenase 8 involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:32,776,837...32,779,042
Ensembl chr 6:33,891,753...33,893,950 		JBrowse link
G LIPC lipase C, hepatic type involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:37,363,507...37,537,723
Ensembl chr15:55,814,017...55,847,005 		JBrowse link
G LOC100972336 acyl-CoA synthetase medium chain family member 1 acts_upstream_of_or_within ISO (PMID:11470804) MGI PMID:11470804 NCBI chr16:17,676,986...17,735,611 JBrowse link
G LOC100989931 acyl carrier protein, mitochondrial involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 3:170,136,429...170,137,102
Ensembl chr16:23,833,485...23,849,085 		JBrowse link
G LOC100994985 acyl-coenzyme A synthetase ACSM2B, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:17,765,533...17,805,773 JBrowse link
G LPL lipoprotein lipase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:19,164,541...19,193,100
Ensembl chr 8:16,113,415...16,142,966 		JBrowse link
G MCAT malonyl-CoA-acyl carrier protein transacylase involved_in IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000107 NCBI chr22:24,016,393...24,026,862
Ensembl chr22:42,215,010...42,226,132 		JBrowse link
G MECR mitochondrial trans-2-enoyl-CoA reductase involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:28,463,466...28,501,518
Ensembl chr 1:29,490,318...29,527,704 		JBrowse link
G MLYCD malonyl-CoA decarboxylase involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr16:64,520,860...64,537,955
Ensembl chr16:83,912,793...83,929,162 		JBrowse link
G OXSM 3-oxoacyl-ACP synthase, mitochondrial involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000117 GO_REF:0000118 NCBI chr 3:25,683,801...25,697,227
Ensembl chr 3:26,021,806...26,026,222 		JBrowse link
G PECR peroxisomal trans-2-enoyl-CoA reductase involved_in IEA UniProt GO_REF:0000043 NCBI chr2B:103,300,621...103,344,638
Ensembl chr2B:221,902,404...221,945,134 		JBrowse link
G PLA2G1B phospholipase A2 group IB involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:117,896,729...117,900,946
Ensembl chr12:121,270,082...121,275,740 		JBrowse link
G PLA2G2C phospholipase A2 group IIC involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:19,118,341...19,142,668
Ensembl chr 1:20,161,553...20,176,092 		JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:69,581,748...69,620,721
Ensembl chr 5:74,627,830...74,666,505 		JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:55,928,577...55,998,628
Ensembl chr 1:57,664,237...57,702,227 		JBrowse link
G PRKAB1 protein kinase AMP-activated non-catalytic subunit beta 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:117,246,691...117,260,465
Ensembl chr12:120,624,004...120,637,585 		JBrowse link
G PRKAB2 protein kinase AMP-activated non-catalytic subunit beta 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:122,577,308...122,595,083
Ensembl chr 1:112,934,877...112,952,364 		JBrowse link
G PRKAG1 protein kinase AMP-activated non-catalytic subunit gamma 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:39,731,899...39,748,620
Ensembl chr12:40,611,532...40,628,263 		JBrowse link
G PRKAG2 protein kinase AMP-activated non-catalytic subunit gamma 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:143,143,556...143,463,492
Ensembl chr 7:155,293,748...155,610,078 		JBrowse link
G PRKAG3 protein kinase AMP-activated non-catalytic subunit gamma 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr2B:106,085,299...106,139,298
Ensembl chr2B:224,679,831...224,687,705 		JBrowse link
G RPP14 ribonuclease P/MRP subunit p14 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:58,239,048...58,252,810
Ensembl chr 3:59,653,220...59,666,531
Ensembl chr 3:59,653,220...59,666,531 		JBrowse link
G SCD stearoyl-CoA desaturase involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chr10:96,948,212...96,965,633
Ensembl chr10:100,429,615...100,442,776 		JBrowse link
G SCD5 stearoyl-CoA desaturase 5 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chr 4:41,404,736...41,574,802
Ensembl chr 4:47,255,546...47,425,894 		JBrowse link
G TECR trans-2,3-enoyl-CoA reductase involved_in IEA UniProt GO_REF:0000043 NCBI chr19:14,092,967...14,129,025
Ensembl chr19:14,936,911...14,972,784 		JBrowse link
fatty acid elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:143,275,165...143,295,283
Ensembl chr  X:153,162,412...153,182,424 		JBrowse link
G ELOVL1 ELOVL fatty acid elongase 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr 1:42,664,818...42,686,475
Ensembl chr 1:44,044,693...44,048,769 		JBrowse link
G ELOVL2 ELOVL fatty acid elongase 2 involved_in IEA UniProt GO_REF:0000117 NCBI chr 6:10,820,972...10,884,609
Ensembl chr 6:11,097,903...11,127,911 		JBrowse link
G ELOVL3 ELOVL fatty acid elongase 3 involved_in IEA UniProt GO_REF:0000117 NCBI chr10:98,788,505...98,833,146
Ensembl chr10:102,297,291...102,300,594 		JBrowse link
G ELOVL4 ELOVL fatty acid elongase 4 involved_in IEA UniProt GO_REF:0000117 NCBI chr 6:77,798,058...77,830,840
Ensembl chr 6:81,068,882...81,102,050 		JBrowse link
G ELOVL5 ELOVL fatty acid elongase 5 involved_in IEA UniProt GO_REF:0000117 NCBI chr 6:52,822,038...52,902,122
Ensembl chr 6:54,451,887...54,485,878 		JBrowse link
G ELOVL6 ELOVL fatty acid elongase 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11567032) Ensembl
MGI
UniProt		 PMID:11567032 GO_REF:0000107 GO_REF:0000117 NCBI chr 4:102,545,815...102,695,536
Ensembl chr 4:113,110,466...113,260,444 		JBrowse link
G ELOVL7 ELOVL fatty acid elongase 7 involved_in IEA UniProt GO_REF:0000117 NCBI chr 5:53,156,518...53,248,839
Ensembl chr 5:54,853,330...54,888,930 		JBrowse link
G HACD1 3-hydroxyacyl-CoA dehydratase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:17,911,158...17,940,075
Ensembl chr10:18,183,125...18,209,361 		JBrowse link
G HACD2 3-hydroxyacyl-CoA dehydratase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:120,588,195...120,684,177 JBrowse link
G HACD3 3-hydroxyacyl-CoA dehydratase 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr15:44,473,542...44,520,885
Ensembl chr15:62,752,762...62,799,950 		JBrowse link
G HACD4 3-hydroxyacyl-CoA dehydratase 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:20,811,857...20,839,900
Ensembl chr 9:21,470,670...21,495,350 		JBrowse link
G TECR trans-2,3-enoyl-CoA reductase involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:14,092,967...14,129,025
Ensembl chr19:14,936,911...14,972,784 		JBrowse link
fatty acid elongation, monounsaturated fatty acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ELOVL1 ELOVL fatty acid elongase 1 involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:42,664,818...42,686,475
Ensembl chr 1:44,044,693...44,048,769 		JBrowse link
G ELOVL2 ELOVL fatty acid elongase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:10,820,972...10,884,609
Ensembl chr 6:11,097,903...11,127,911 		JBrowse link
G ELOVL3 ELOVL fatty acid elongase 3 involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr10:98,788,505...98,833,146
Ensembl chr10:102,297,291...102,300,594 		JBrowse link
G ELOVL4 ELOVL fatty acid elongase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:77,798,058...77,830,840
Ensembl chr 6:81,068,882...81,102,050 		JBrowse link
G ELOVL5 ELOVL fatty acid elongase 5 involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:52,822,038...52,902,122
Ensembl chr 6:54,451,887...54,485,878 		JBrowse link
G ELOVL6 ELOVL fatty acid elongase 6 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000104 GO_REF:0000118 NCBI chr 4:102,545,815...102,695,536
Ensembl chr 4:113,110,466...113,260,444 		JBrowse link
G ELOVL7 ELOVL fatty acid elongase 7 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000104 GO_REF:0000118 NCBI chr 5:53,156,518...53,248,839
Ensembl chr 5:54,853,330...54,888,930 		JBrowse link
fatty acid elongation, polyunsaturated fatty acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ELOVL1 ELOVL fatty acid elongase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:42,664,818...42,686,475
Ensembl chr 1:44,044,693...44,048,769 		JBrowse link
G ELOVL2 ELOVL fatty acid elongase 2 involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:10,820,972...10,884,609
Ensembl chr 6:11,097,903...11,127,911 		JBrowse link
G ELOVL3 ELOVL fatty acid elongase 3 involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr10:98,788,505...98,833,146
Ensembl chr10:102,297,291...102,300,594 		JBrowse link
G ELOVL4 ELOVL fatty acid elongase 4 involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:77,798,058...77,830,840
Ensembl chr 6:81,068,882...81,102,050 		JBrowse link
G ELOVL5 ELOVL fatty acid elongase 5 involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:52,822,038...52,902,122
Ensembl chr 6:54,451,887...54,485,878 		JBrowse link
G ELOVL6 ELOVL fatty acid elongase 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:102,545,815...102,695,536
Ensembl chr 4:113,110,466...113,260,444 		JBrowse link
G ELOVL7 ELOVL fatty acid elongase 7 involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:53,156,518...53,248,839
Ensembl chr 5:54,853,330...54,888,930 		JBrowse link
fatty acid elongation, saturated fatty acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ELOVL1 ELOVL fatty acid elongase 1 involved_in IEA UniProt
TreeGrafter
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:42,664,818...42,686,475
Ensembl chr 1:44,044,693...44,048,769 		JBrowse link
G ELOVL2 ELOVL fatty acid elongase 2 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 6:10,820,972...10,884,609
Ensembl chr 6:11,097,903...11,127,911 		JBrowse link
G ELOVL3 ELOVL fatty acid elongase 3 involved_in IEA UniProt
TreeGrafter
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr10:98,788,505...98,833,146
Ensembl chr10:102,297,291...102,300,594 		JBrowse link
G ELOVL4 ELOVL fatty acid elongase 4 involved_in IEA InterPro
TreeGrafter
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:77,798,058...77,830,840
Ensembl chr 6:81,068,882...81,102,050 		JBrowse link
G ELOVL5 ELOVL fatty acid elongase 5 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 6:52,822,038...52,902,122
Ensembl chr 6:54,451,887...54,485,878 		JBrowse link
G ELOVL6 ELOVL fatty acid elongase 6 involved_in IEA Ensembl
TreeGrafter
InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:102,545,815...102,695,536
Ensembl chr 4:113,110,466...113,260,444 		JBrowse link
G ELOVL7 ELOVL fatty acid elongase 7 involved_in IEA Ensembl
TreeGrafter
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:53,156,518...53,248,839
Ensembl chr 5:54,853,330...54,888,930 		JBrowse link
G HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:43,641,323...43,817,214
Ensembl chr11:44,137,597...44,312,986 		JBrowse link
gamma-aminobutyric acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABAT 4-aminobutyrate aminotransferase ISO RGD PMID:19540876 RGD:9588538 NCBI chr16:7,609,282...7,718,049
Ensembl chr16:8,888,178...8,958,420 		JBrowse link
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 involved_in ISO (PMID:26430123) UniProt PMID:26430123 NCBI chr 9:51,737,305...51,916,648
Ensembl chr 9:71,680,890...71,814,085 		JBrowse link
G GAD1 glutamate decarboxylase 1 involved_in ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:17712632 GO_REF:0000107 GO_REF:0000118 RGD:6480258 NCBI chr2B:58,100,623...58,145,045
Ensembl chr2B:175,558,538...175,602,944 		JBrowse link
G GAD2 glutamate decarboxylase 2 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:22108820 GO_REF:0000118 RGD:401900601 NCBI chr10:26,392,877...26,481,859
Ensembl chr10:26,759,243...26,843,197 		JBrowse link
G SLC1A3 solute carrier family 1 member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15305132) Ensembl
MGI		 PMID:15305132 GO_REF:0000107 NCBI chr 5:73,679,841...73,761,591
Ensembl chr 5:78,960,797...79,042,694 		JBrowse link
G SLC38A1 solute carrier family 38 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:42,464,360...42,550,324
Ensembl chr12:43,362,597...43,413,616 		JBrowse link
glutamate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLS glutaminase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr2B:78,182,117...78,267,071
Ensembl chr2B:196,098,910...196,183,323 		JBrowse link
G GLS2 glutaminase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:32,426,264...32,443,690
Ensembl chr12:32,678,814...32,696,694 		JBrowse link
G GLUD1 glutamate dehydrogenase 1 involved_in ISO (PMID:11032875) BHF-UCL PMID:11032875 NCBI chr10:83,498,338...83,540,730 JBrowse link
G GLUD2 glutamate dehydrogenase 2 involved_in ISO (PMID:11032875) BHF-UCL PMID:11032875 NCBI chr  X:110,223,978...111,065,243 JBrowse link
G SLC25A12 solute carrier family 25 member 12 ISO RGD PMID:19764902 RGD:13628741 NCBI chr2B:59,071,123...59,297,327
Ensembl chr2B:176,532,940...176,641,894 		JBrowse link
glutamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLUL glutamate-ammonia ligase involved_in ISO
IEA		 RGD
TreeGrafter
InterPro		 PMID:28323 PMID:4403443 GO_REF:0000002 GO_REF:0000118 RGD:2301547 RGD:2301548 NCBI chr 1:157,882,258...157,891,562
Ensembl chr 1:161,534,106...161,543,411 		JBrowse link
G LGSN lengsin, lens protein with glutamine synthetase domain involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:60,964,873...61,008,833
Ensembl chr 6:66,239,052...66,280,600 		JBrowse link
glycine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHMT1 serine hydroxymethyltransferase 1 ISO from L-allothreonine in the absence of tetrahydrofolate RGD PMID:3110140 RGD:2300383 NCBI chr17:32,870,949...32,905,690
Ensembl chr17:37,849,206...37,884,220 		JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 ISO from L-allothreonine in the absence of tetrahydrofolate RGD PMID:3110140 RGD:2300383 NCBI chr12:31,692,451...31,697,727
Ensembl chr12:31,944,785...31,950,138 		JBrowse link
glycine biosynthetic process from serine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHMT1 serine hydroxymethyltransferase 1 involved_in ISO
IEA		 in the presence of tetrahydrofolate RGD
TreeGrafter
InterPro		 PMID:3110140 GO_REF:0000002 GO_REF:0000118 RGD:2300383 NCBI chr17:32,870,949...32,905,690
Ensembl chr17:37,849,206...37,884,220 		JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 involved_in ISO
IEA		 in the presence of tetrahydrofolate RGD
TreeGrafter
InterPro		 PMID:3110140 GO_REF:0000002 GO_REF:0000118 RGD:2300383 NCBI chr12:31,692,451...31,697,727
Ensembl chr12:31,944,785...31,950,138 		JBrowse link
glycine biosynthetic process, by transamination of glyoxylate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGXT alanine--glyoxylate aminotransferase involved_in ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:12383475 GO_REF:0000107 GO_REF:0000118 RGD:1599457 NCBI chr2B:128,125,289...128,137,091
Ensembl chr2B:246,928,784...246,939,837 		JBrowse link
G AGXT2 alanine--glyoxylate aminotransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:75,322,351...75,373,261
Ensembl chr 5:80,601,554...80,652,575 		JBrowse link
glycolate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PARK7 Parkinsonism associated deglycase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:6,722,260...6,745,915
Ensembl chr 1:7,969,280...7,993,271 		JBrowse link
hepoxilin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALOX12 arachidonate 12-lipoxygenase, 12S type involved_in ISO PMID:23382512 UniProt PMID:23382512 RGD:8554649 NCBI chr17:7,026,839...7,041,598
Ensembl chr17:7,014,591...7,029,602 		JBrowse link
G ALOX12B arachidonate 12-lipoxygenase, 12R type involved_in ISO PMID:23382512 UniProt PMID:23382512 RGD:8554649 NCBI chr17:43,569,858...43,588,039
Ensembl chr17:48,302,450...48,317,029 		JBrowse link
G ALOX15 arachidonate 15-lipoxygenase involved_in ISO PMID:23382512 RGD
UniProt		 PMID:15123652 PMID:23382512 RGD:5509794 RGD:8554649 NCBI chr17:4,686,339...4,696,877
Ensembl chr17:4,677,125...4,687,669 		JBrowse link
G ALOXE3 arachidonate epidermal lipoxygenase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:43,539,657...43,562,433
Ensembl chr17:48,271,226...48,293,941 		JBrowse link
G GSTM1 glutathione S-transferase mu 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 1:127,979,238...128,010,411 JBrowse link
G GSTM2 glutathione S-transferase mu 2 involved_in ISO (PMID:21046276) UniProt PMID:21046276 NCBI chr 1:112,043,201...112,050,810 JBrowse link
G GSTP1 glutathione S-transferase pi 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:62,942,756...62,945,701
Ensembl chr11:66,253,421...66,256,472 		JBrowse link
G LOC100971127 arachidonate 15-lipoxygenase type B involved_in ISO PMID:23382512 UniProt PMID:23382512 RGD:8554649 NCBI chr17:43,609,146...43,619,713
Ensembl chr17:48,340,777...48,350,808 		JBrowse link
hydroxylysine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLOD2 procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:143,091,833...143,181,831
Ensembl chr 3:150,675,424...150,764,939 		JBrowse link
G PLOD3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:93,347,335...93,358,921
Ensembl chr 7:106,587,858...106,599,605 		JBrowse link
icosanoid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP2C8 cytochrome P450 family 2 subfamily C member 8 involved_in ISO (PMID:15766564) UniProt PMID:15766564 NCBI chr10:91,646,387...91,679,998
Ensembl chr10:95,157,661...95,186,620 		JBrowse link
G CYP2C9 cytochrome P450 family 2 subfamily C member 9 involved_in ISO (PMID:15766564) UniProt PMID:15766564 NCBI chr10:91,547,865...91,598,918
Ensembl chr10:95,022,482...95,105,653 		JBrowse link
G CYP4A11 cytochrome P450 family 4 subfamily A member 11 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:46,228,434...46,240,736
Ensembl chr 1:47,583,564...47,594,870 		JBrowse link
G CYP4A22 cytochrome P450 family 4 subfamily A member 22 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:12857783 GO_REF:0000118 RGD:1625451 NCBI chr 1:46,442,854...46,455,153
Ensembl chr 1:47,958,368...47,970,230 		JBrowse link
G PLA2G4A phospholipase A2 group IVA involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17293613) Ensembl
MGI		 PMID:17293613 GO_REF:0000107 NCBI chr 1:162,362,600...162,521,974
Ensembl chr 1:166,512,870...166,672,101 		JBrowse link
isoleucine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ILVBL ilvB acetolactate synthase like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:14,648,081...14,658,879
Ensembl chr19:15,632,614...15,643,414 		JBrowse link
G SDS serine dehydratase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:110,995,164...111,006,668
Ensembl chr12:114,377,650...114,388,839 		JBrowse link
G SDSL serine dehydratase like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:111,024,957...111,040,900
Ensembl chr12:114,406,738...114,422,347 		JBrowse link
kynurenic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IDO1 indoleamine 2,3-dioxygenase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19234212) Ensembl
MGI		 PMID:19234212 GO_REF:0000107 NCBI chr 8:39,108,310...39,123,611
Ensembl chr 8:36,617,312...36,632,352 		JBrowse link
G KMO kynurenine 3-monooxygenase ISO RGD PMID:15829251 RGD:13513901 NCBI chr 1:217,094,037...217,157,827
Ensembl chr 1:222,075,268...222,138,866 		JBrowse link
L-arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASL argininosuccinate lyase involved_in IEA Ensembl
UniProt		 GO_REF:0000041 GO_REF:0000107 NCBI chr 7:59,908,648...59,948,822
Ensembl chr 7:73,142,842...73,157,472
Ensembl chr 7:73,142,842...73,157,472 		JBrowse link
G ASS1 argininosuccinate synthase 1 involved_in ISO
IEA		 RGD
TreeGrafter
UniProt
Ensembl
InterPro		 PMID:12470967 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 RGD:631755 NCBI chr 9:101,569,442...101,625,899
Ensembl chr 9:130,219,993...130,276,036 		JBrowse link
G CPS1 carbamoyl-phosphate synthase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr2B:97,735,486...97,936,623
Ensembl chr2B:216,136,857...216,337,728 		JBrowse link
G NAGS N-acetylglutamate synthase involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000118 NCBI chr17:13,386,207...13,390,724
Ensembl chr17:13,553,424...13,558,269 		JBrowse link
L-ascorbic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1A1 aldo-keto reductase family 1 member A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15769935) Ensembl
MGI		 PMID:15769935 GO_REF:0000107 NCBI chr 1:44,853,867...44,871,764
Ensembl chr 1:46,211,859...46,230,072 		JBrowse link
G AKR1B1 aldo-keto reductase family 1 member B involved_in ISO (PMID:20410296) MGI PMID:20410296 NCBI chr 7:126,400,861...126,417,756
Ensembl chr 7:138,912,953...138,924,095 		JBrowse link
G GSTO1 glutathione S-transferase omega 1 ISO RGD PMID:9786866 RGD:70644 NCBI chr10:100,853,682...100,866,892
Ensembl chr10:104,313,024...104,325,733 		JBrowse link
G RGN regucalcin involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:39,513,135...39,530,188
Ensembl chr  X:47,371,226...47,388,881 		JBrowse link
L-asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASNS asparagine synthetase (glutamine-hydrolyzing) involved_in IEA UniProt GO_REF:0000041 NCBI chr 7:89,811,363...89,831,733
Ensembl chr 7:103,392,540...103,413,046 		JBrowse link
L-glutamate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GOT1 glutamic-oxaloacetic transaminase 1 ISO RGD PMID:16489927 RGD:13504861 NCBI chr10:96,012,345...96,046,266
Ensembl chr10:99,506,205...99,540,178 		JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 ISO RGD PMID:16489927 RGD:13504861 NCBI chr16:38,995,770...39,022,750
Ensembl chr16:58,120,781...58,147,378 		JBrowse link
L-leucine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:61,364,154...61,500,827
Ensembl chr12:63,978,116...64,107,463 		JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:11733007 GO_REF:0000118 RGD:1582175 NCBI chr19:45,793,433...45,809,546
Ensembl chr19:54,945,157...54,962,887 		JBrowse link
L-methionine salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHMT betaine--homocysteine S-methyltransferase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:36,181,183...36,201,833
Ensembl chr 5:36,670,854...36,728,993 		JBrowse link
G BHMT2 betaine--homocysteine S-methyltransferase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:36,223,429...36,242,187
Ensembl chr 5:36,670,854...36,728,993 		JBrowse link
L-methionine salvage from methylthioadenosine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADI1 acireductone dioxygenase 1 involved_in IEA Ensembl
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000104 GO_REF:0000107 NCBI chr2A:3,509,162...3,538,064
Ensembl chr2A:3,430,158...3,458,248 		JBrowse link
G APIP APAF1 interacting protein involved_in IEA InterPro
UniProt
TreeGrafter		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000104 GO_REF:0000118 NCBI chr11:34,855,437...34,889,486
Ensembl chr11:34,730,671...34,764,732 		JBrowse link
G ENOPH1 enolase-phosphatase 1 involved_in IEA UniProt
TreeGrafter
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:41,741,072...41,771,150
Ensembl chr 4:47,591,329...47,621,357 		JBrowse link
G MRI1 methylthioribose-1-phosphate isomerase 1 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000104 GO_REF:0000118 NCBI chr19:13,327,569...13,336,286
Ensembl chr19:14,060,859...14,067,222 		JBrowse link
G MTAP methylthioadenosine phosphorylase involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000104 GO_REF:0000118 NCBI chr 9:21,637,543...21,769,698
Ensembl chr 9:22,266,376...22,382,218 		JBrowse link
L-proline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH18A1 aldehyde dehydrogenase 18 family member A1 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000104 NCBI chr10:92,216,639...92,267,525
Ensembl chr10:95,723,099...95,774,095 		JBrowse link
G NOXRED1 NADP dependent oxidoreductase domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:57,946,614...57,979,637
Ensembl chr14:77,148,487...77,179,648 		JBrowse link
G OAT ornithine aminotransferase involved_in IEA UniProt GO_REF:0000041 NCBI chr10:120,955,805...120,977,484
Ensembl chr10:125,224,032...125,245,504 		JBrowse link
G PYCR1 pyrroline-5-carboxylate reductase 1 involved_in IEA UniProt
Ensembl
TreeGrafter		 GO_REF:0000041 GO_REF:0000107 GO_REF:0000118 NCBI chr17:76,337,991...76,348,207
Ensembl chr17:82,040,824...82,045,686 		JBrowse link
G PYCR2 pyrroline-5-carboxylate reductase 2 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000118 NCBI chr 1:201,381,270...201,385,703
Ensembl chr 1:206,381,539...206,386,002 		JBrowse link
G PYCR3 pyrroline-5-carboxylate reductase 3 involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000041 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:140,356,586...140,362,972
Ensembl chr 8:143,371,748...143,378,032 		JBrowse link
L-serine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100993185 putative phosphoserine phosphatase-like protein involved_in ISO (PMID:14673469) UniProt PMID:14673469 NCBI chr 7:56,351,434...56,376,714 JBrowse link
G PHGDH phosphoglycerate dehydrogenase involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 1:82,803,155...82,835,465
Ensembl chr 1:117,800,843...117,833,462 		JBrowse link
G PSAT1 phosphoserine aminotransferase 1 involved_in IEA UniProt
TreeGrafter
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:46,517,253...46,550,018
Ensembl chr 9:77,147,493...77,180,439 		JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 ISO RGD PMID:10457370 RGD:2300380 NCBI chr12:31,692,451...31,697,727
Ensembl chr12:31,944,785...31,950,138 		JBrowse link
L-valine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:61,364,154...61,500,827
Ensembl chr12:63,978,116...64,107,463 		JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:45,793,433...45,809,546
Ensembl chr19:54,945,157...54,962,887 		JBrowse link
G ILVBL ilvB acetolactate synthase like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:14,648,081...14,658,879
Ensembl chr19:15,632,614...15,643,414 		JBrowse link
lactate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATD1 glutamine amidotransferase class 1 domain containing 1 involved_in IEA GOC GO_REF:0000108 NCBI chr11:784,569...794,911
Ensembl chr11:833,230...839,421 		JBrowse link
G INS insulin involved_in ISO (PMID:8069456) AgBase PMID:8069456 NCBI chr11:2,200,785...2,202,579
Ensembl chr11:2,218,117...2,231,666 		JBrowse link
G PARK7 Parkinsonism associated deglycase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:6,722,260...6,745,915
Ensembl chr 1:7,969,280...7,993,271 		JBrowse link
G PER2 period circadian regulator 2 involved_in ISO (PMID:23977055) UniProt PMID:23977055 NCBI chr2B:125,477,021...125,521,577
Ensembl chr2B:244,328,122...244,371,040 		JBrowse link
lactate biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HTT huntingtin acts_upstream_of_or_within ISO (PMID:17708681) MGI PMID:17708681 NCBI chr 4:3,215,081...3,388,587
Ensembl chr 4:3,128,718...3,283,730 		JBrowse link
G LDHC lactate dehydrogenase C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18367675) Ensembl
MGI		 PMID:18367675 GO_REF:0000107 NCBI chr11:18,450,117...18,489,321
Ensembl chr11:18,132,829...18,172,055 		JBrowse link
leukotriene A4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALOX5 arachidonate 5-lipoxygenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:42,461,398...42,531,576
Ensembl chr10:45,639,946...45,710,016 		JBrowse link
leukotriene biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALOX5 arachidonate 5-lipoxygenase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19075240) Ensembl
MGI		 PMID:19075240 GO_REF:0000107 NCBI chr10:42,461,398...42,531,576
Ensembl chr10:45,639,946...45,710,016 		JBrowse link
G ALOX5AP arachidonate 5-lipoxygenase activating protein involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:9091580)
(PMID:19075240)		 RGD
TreeGrafter
UniProt
MGI
Ensembl		 PMID:2300173 PMID:9091580 PMID:19075240 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 RGD:2313889 RGD:69749 NCBI chr13:12,012,399...12,041,557
Ensembl chr13:30,425,510...30,476,607 		JBrowse link
G CAMP cathelicidin antimicrobial peptide ISO RGD PMID:24990383 RGD:442380204 NCBI chr 3:48,137,785...48,139,893
Ensembl chr 3:49,222,110...49,224,250 		JBrowse link
G FCER1A Fc epsilon receptor Ia acts_upstream_of_or_within ISO (PMID:9000133) MGI PMID:9000133 NCBI chr 1:134,655,230...134,660,961
Ensembl chr 1:138,439,921...138,458,258 		JBrowse link
G LTA4H leukotriene A4 hydrolase involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr12:93,589,758...93,624,529
Ensembl chr12:96,978,203...97,012,427 		JBrowse link
G LTC4S leukotriene C4 synthase ISO RGD PMID:14637132 RGD:2302289 NCBI chr 5:174,946,346...174,950,805 JBrowse link
G MGST2 microsomal glutathione S-transferase 2 involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:132,031,087...132,106,864
Ensembl chr 4:143,338,016...143,412,966 		JBrowse link
G MGST3 microsomal glutathione S-transferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:141,063,051...141,087,563
Ensembl chr 1:144,868,059...144,876,684 		JBrowse link
G PLA2G1B phospholipase A2 group IB involved_in ISO (PMID:16005851) BHF-UCL PMID:16005851 NCBI chr12:117,896,729...117,900,946
Ensembl chr12:121,270,082...121,275,740 		JBrowse link
G PLA2G4A phospholipase A2 group IVA involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr 1:162,362,600...162,521,974
Ensembl chr 1:166,512,870...166,672,101 		JBrowse link
G PLA2G5 phospholipase A2 group V involved_in ISO
IEA		 RGD
Ensembl		 PMID:11106649 GO_REF:0000107 RGD:2303037 NCBI chr 1:18,983,104...19,046,834
Ensembl chr 1:20,068,110...20,089,840 		JBrowse link
G PRG3 proteoglycan 3, pro eosinophil major basic protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:52,617,688...52,622,058
Ensembl chr 3:160,108,051...160,112,421 		JBrowse link
G SYK spleen associated tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9000133) Ensembl
MGI		 PMID:9000133 GO_REF:0000107 NCBI chr 9:61,859,767...61,956,619
Ensembl chr 9:89,959,599...90,056,101 		JBrowse link
leukotriene D4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GGT1 gamma-glutamyltransferase 1 involved_in ISO (PMID:21447318)
(PMID:14754911)		 BHF-UCL
UniProt		 PMID:14754911 PMID:21447318 NCBI chr22:5,424,334...5,469,705 JBrowse link
G GGT5 gamma-glutamyltransferase 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9774450)
(PMID:12163373)		 Ensembl
MGI		 PMID:9774450 PMID:12163373 GO_REF:0000107 NCBI chr22:5,025,740...5,053,074
Ensembl chr22:23,110,780...23,125,632 		JBrowse link
lipoate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIAS lipoic acid synthetase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11389890) Ensembl
TreeGrafter
MGI
UniProt
InterPro		 PMID:11389890 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:33,787,804...33,806,289
Ensembl chr 4:39,639,960...39,657,805 		JBrowse link
G RPP14 ribonuclease P/MRP subunit p14 acts_upstream_of_or_within ISO (PMID:33774475) MGI PMID:33774475 NCBI chr 3:58,239,048...58,252,810
Ensembl chr 3:59,653,220...59,666,531
Ensembl chr 3:59,653,220...59,666,531 		JBrowse link
lipoxin A4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALOX12 arachidonate 12-lipoxygenase, 12S type involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:7,026,839...7,041,598
Ensembl chr17:7,014,591...7,029,602 		JBrowse link
G ALOX15 arachidonate 15-lipoxygenase involved_in ISO (PMID:15708862) UniProt PMID:15708862 NCBI chr17:4,686,339...4,696,877
Ensembl chr17:4,677,125...4,687,669 		JBrowse link
G LOC100971127 arachidonate 15-lipoxygenase type B involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:43,609,146...43,619,713
Ensembl chr17:48,340,777...48,350,808 		JBrowse link
lipoxin B4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALOX12 arachidonate 12-lipoxygenase, 12S type involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:7,026,839...7,041,598
Ensembl chr17:7,014,591...7,029,602 		JBrowse link
long-chain fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACSBG1 acyl-CoA synthetase bubblegum family member 1 ISO RGD PMID:11381125 RGD:68727 NCBI chr15:57,098,752...57,164,119
Ensembl chr15:76,064,937...76,128,835 		JBrowse link
G ELOVL6 ELOVL fatty acid elongase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:102,545,815...102,695,536
Ensembl chr 4:113,110,466...113,260,444 		JBrowse link
G FADS1 fatty acid desaturase 1 acts_upstream_of_or_within ISO (PMID:10601301) MGI PMID:10601301 NCBI chr11:57,101,553...57,116,243
Ensembl chr11:60,462,420...60,476,798 		JBrowse link
G GSTM4 glutathione S-transferase mu 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:112,033,462...112,337,606
Ensembl chr 1:111,261,585...111,270,919 		JBrowse link
G LOC100985247 putative inactive neutral ceramidase B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:46,842,830...46,908,811
Ensembl chr10:48,969,434...49,025,336 		JBrowse link
G LTC4S leukotriene C4 synthase involved_in ISO (PMID:27791009) UniProt PMID:27791009 NCBI chr 5:174,946,346...174,950,805 JBrowse link
G MYO5A myosin VA acts_upstream_of_or_within ISO (PMID:1150661) MGI PMID:1150661 NCBI chr15:31,246,192...31,470,040
Ensembl chr15:49,578,491...49,704,319 		JBrowse link
G PLP1 proteolipid protein 1 acts_upstream_of_or_within ISO (PMID:1150661) MGI PMID:1150661 NCBI chr  X:93,015,098...93,031,193
Ensembl chr  X:103,353,184...103,412,513 		JBrowse link
G QKI QKI, KH domain containing RNA binding acts_upstream_of_or_within ISO (PMID:1150661) MGI PMID:1150661 NCBI chr 6:161,361,413...161,523,414 JBrowse link
lysine biosynthetic process via aminoadipic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:100,969,185...100,990,296
Ensembl chr11:104,452,913...104,474,063 		JBrowse link
G AASS aminoadipate-semialdehyde synthase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:114,084,792...114,155,558
Ensembl chr 7:126,769,655...126,840,346 		JBrowse link
medium-chain fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABHD1 abhydrolase domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr2A:27,122,572...27,129,787
Ensembl chr2A:27,211,963...27,219,013 		JBrowse link
G ABHD2 abhydrolase domain containing 2, acylglycerol lipase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:67,780,453...67,891,454
Ensembl chr15:86,987,070...87,095,818 		JBrowse link
G ABHD3 abhydrolase domain containing 3, phospholipase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:14,888,915...14,944,295
Ensembl chr18:18,527,364...18,578,736 		JBrowse link
G ACOT7 acyl-CoA thioesterase 7 involved_in ISO (PMID:10578051) BHF-UCL PMID:10578051 NCBI chr 1:5,030,488...5,154,800 JBrowse link
G OLAH oleoyl-ACP hydrolase involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:15,356,380...15,386,599
Ensembl chr10:15,642,307...15,667,461 		JBrowse link
G OXSM 3-oxoacyl-ACP synthase, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:25,683,801...25,697,227
Ensembl chr 3:26,021,806...26,026,222 		JBrowse link
methionine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADI1 acireductone dioxygenase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr2A:3,509,162...3,538,064
Ensembl chr2A:3,430,158...3,458,248 		JBrowse link
G APIP APAF1 interacting protein involved_in IEA UniProt GO_REF:0000043 NCBI chr11:34,855,437...34,889,486
Ensembl chr11:34,730,671...34,764,732 		JBrowse link
G BHMT betaine--homocysteine S-methyltransferase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15217352) RGD
MGI
UniProt
InterPro		 PMID:15217352 PMID:15845641 GO_REF:0000002 GO_REF:0000117 RGD:1359026 NCBI chr 5:36,181,183...36,201,833
Ensembl chr 5:36,670,854...36,728,993 		JBrowse link
G BHMT2 betaine--homocysteine S-methyltransferase 2 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000117 NCBI chr 5:36,223,429...36,242,187
Ensembl chr 5:36,670,854...36,728,993 		JBrowse link
G ENOPH1 enolase-phosphatase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:41,741,072...41,771,150
Ensembl chr 4:47,591,329...47,621,357 		JBrowse link
G MRI1 methylthioribose-1-phosphate isomerase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:13,327,569...13,336,286
Ensembl chr19:14,060,859...14,067,222 		JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:44,969,573...45,041,296
Ensembl chr14:63,223,484...63,293,881 		JBrowse link
G MTHFR methylenetetrahydrofolate reductase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15217352) MGI
TreeGrafter		 PMID:15217352 GO_REF:0000118 NCBI chr 1:10,548,196...10,568,174
Ensembl chr 1:11,766,334...11,785,419 		JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:11158293) RGD
TreeGrafter
MGI
UniProt
Ensembl
InterPro		 PMID:11158293 PMID:11730351 PMID:15845641 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 RGD:1359026 RGD:1601423 NCBI chr 1:212,353,195...212,463,304
Ensembl chr 1:217,358,050...217,460,946 		JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:8,195,868...8,228,071
Ensembl chr 5:8,017,403...8,049,322 		JBrowse link
monounsaturated fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SCD stearoyl-CoA desaturase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:96,948,212...96,965,633
Ensembl chr10:100,429,615...100,442,776 		JBrowse link
G SCD5 stearoyl-CoA desaturase 5 acts_upstream_of_or_within ISO (PMID:16443825) MGI PMID:16443825 NCBI chr 4:41,404,736...41,574,802
Ensembl chr 4:47,255,546...47,425,894 		JBrowse link
N-acetylneuraminate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNE glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:36,064,128...36,107,822
Ensembl chr 9:36,867,096...36,926,588 		JBrowse link
G NANP N-acetylneuraminic acid phosphatase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:25,566,464...25,576,960
Ensembl chr20:25,970,274...25,981,685 		JBrowse link
G NANS N-acetylneuraminate synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:69,146,016...69,172,355
Ensembl chr 9:97,267,088...97,293,385 		JBrowse link
negative regulation of bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF19 fibroblast growth factor 19 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23747249) Ensembl
MGI		 PMID:23747249 GO_REF:0000107 NCBI chr11:64,794,157...64,800,512
Ensembl chr11:68,085,306...68,090,028 		JBrowse link
G MALRD1 MAM and LDL receptor class A domain containing 1 acts_upstream_of_or_within ISO (PMID:23747249) MGI PMID:23747249 NCBI chr10:19,461,865...19,886,155 JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:189,556,124...189,609,297
Ensembl chr 1:194,412,980...194,460,763 		JBrowse link
negative regulation of citrulline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:179,231,712...179,348,759
Ensembl chr 1:183,580,773...183,639,882 		JBrowse link
negative regulation of fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADL acyl-CoA dehydrogenase long chain involved_in ISO (PMID:15639194) BHF-UCL PMID:15639194 NCBI chr2B:97,445,421...97,483,514
Ensembl chr2B:215,847,775...215,885,524 		JBrowse link
G ACADVL acyl-CoA dehydrogenase very long chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:7,249,717...7,255,165
Ensembl chr17:7,234,283...7,242,417 		JBrowse link
G APOC1 apolipoprotein C1 involved_in ISO (PMID:15576844) BHF-UCL PMID:15576844
G APOC3 apolipoprotein C3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:111,667,816...111,670,861
Ensembl chr11:115,600,416...115,603,460 		JBrowse link
G BRCA1 BRCA1 DNA repair associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,197,946...14,279,064
Ensembl chr17:14,428,526...14,506,815 		JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 involved_in ISO PMID:16054098 UniProt PMID:16054098 RGD:11059593 NCBI chr19:39,395,550...39,417,063
Ensembl chr19:47,989,430...48,008,739 		JBrowse link
G CYP7A1 cytochrome P450 family 7 subfamily A member 1 involved_in ISO PMID:23536474 BHF-UCL PMID:23536474 RGD:13792517 NCBI chr 8:54,942,509...54,952,500
Ensembl chr 8:56,593,799...56,604,037 		JBrowse link
G DCAF5 DDB1 and CUL4 associated factor 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:49,640,440...49,743,118
Ensembl chr14:68,514,979...68,616,968 		JBrowse link
G ERLIN1 ER lipid raft associated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:96,756,261...96,791,925
Ensembl chr10:100,238,320...100,273,942 		JBrowse link
G ERLIN2 ER lipid raft associated 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:37,034,391...37,057,164
Ensembl chr 8:34,212,704...34,233,583 		JBrowse link
G INSIG1 insulin induced gene 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16100574) Ensembl
MGI		 PMID:16100574 GO_REF:0000107 NCBI chr 7:146,893,730...146,906,329
Ensembl chr 7:158,619,531...158,632,012 		JBrowse link
G INSIG2 insulin induced gene 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16100574) Ensembl
MGI		 PMID:16100574 GO_REF:0000107 NCBI chr2B:5,046,971...5,068,757
Ensembl chr2B:118,632,402...118,652,647 		JBrowse link
G KLHL25 kelch like family member 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:64,448,130...64,486,254
Ensembl chr15:83,670,090...83,671,859 		JBrowse link
G TRIB3 tribbles pseudokinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:583,267...605,416
Ensembl chr20:359,879...375,486 		JBrowse link
G UBR4 ubiquitin protein ligase E3 component n-recognin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:18,032,528...18,168,954
Ensembl chr 1:19,079,779...19,215,578 		JBrowse link
G WDTC1 WD and tetratricopeptide repeats 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17767906) MGI
Ensembl
TreeGrafter		 PMID:17767906 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:26,487,185...26,560,974
Ensembl chr 1:27,554,268...27,616,429 		JBrowse link
negative regulation of prostaglandin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PIBF1 progesterone immunomodulatory binding factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:54,011,239...54,247,952
Ensembl chr13:72,788,608...73,022,473 		JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069 		JBrowse link
negative regulation of quinolinate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACMSD aminocarboxymuconate semialdehyde decarboxylase involved_in IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chr2B:24,958,661...25,019,901
Ensembl chr2B:138,918,281...138,978,407 		JBrowse link
negative regulation of retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1C3 aldo-keto reductase family 1 member C3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:5,079,580...5,157,572
Ensembl chr10:5,081,214...5,139,812 		JBrowse link
G PRMT3 protein arginine methyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:20,412,419...20,538,295
Ensembl chr11:20,324,196...20,449,681 		JBrowse link
ornithine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH18A1 aldehyde dehydrogenase 18 family member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:92,216,639...92,267,525
Ensembl chr10:95,723,099...95,774,095 		JBrowse link
palmitic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOT7 acyl-CoA thioesterase 7 involved_in ISO (PMID:10578051) BHF-UCL PMID:10578051 NCBI chr 1:5,030,488...5,154,800 JBrowse link
positive regulation of bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:17,188,390...17,196,315
Ensembl chr17:17,409,669...17,417,600 		JBrowse link
G STAR steroidogenic acute regulatory protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:37,446,334...37,454,102
Ensembl chr 8:34,623,201...34,629,544 		JBrowse link
G STARD4 StAR related lipid transfer domain containing 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:106,855,990...106,873,384
Ensembl chr 5:112,657,516...112,675,165 		JBrowse link
positive regulation of fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen acts_upstream_of_or_within ISO (PMID:11606482) MGI PMID:11606482 NCBI chr 1:206,252,141...206,263,830
Ensembl chr 1:211,279,015...211,291,044 		JBrowse link
G APOA4 apolipoprotein A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:111,659,186...111,661,790
Ensembl chr11:115,591,788...115,594,382 		JBrowse link
G APOA5 apolipoprotein A5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:111,625,403...111,627,932
Ensembl chr11:115,559,231...115,562,286 		JBrowse link
G APOC2 apolipoprotein C2 involved_in ISO (PMID:10727238) BHF-UCL PMID:10727238 NCBI chr19:41,892,954...41,896,461 JBrowse link
G ELOVL5 ELOVL fatty acid elongase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:52,822,038...52,902,122
Ensembl chr 6:54,451,887...54,485,878 		JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha ISO RGD PMID:16800817 RGD:1624995 NCBI chr20:40,684,450...40,763,824
Ensembl chr20:41,779,034...41,856,536 		JBrowse link
G INS insulin involved_in ISO (PMID:14677856) CACAO PMID:14677856 NCBI chr11:2,200,785...2,202,579
Ensembl chr11:2,218,117...2,231,666 		JBrowse link
G KAT2B lysine acetyltransferase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:19,956,067...20,070,637
Ensembl chr 3:20,286,865...20,400,770 		JBrowse link
G LPGAT1 lysophosphatidylglycerol acyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:187,312,071...187,399,145
Ensembl chr 1:192,179,164...192,262,799 		JBrowse link
G MID1IP1 MID1 interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:31,246,622...31,251,703
Ensembl chr  X:38,957,396...38,957,947 		JBrowse link
G MLXIPL MLX interacting protein like involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 7:80,745,765...80,776,153 JBrowse link
G NR1H2 nuclear receptor subfamily 1 group H member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:47,340,077...47,346,737
Ensembl chr19:56,243,124...56,250,024 		JBrowse link
G NR1H3 nuclear receptor subfamily 1 group H member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:47,195,122...47,215,277
Ensembl chr11:47,748,353...47,768,672 		JBrowse link
G RGN regucalcin ISO RGD PMID:16817230 RGD:9590221 NCBI chr  X:39,513,135...39,530,188
Ensembl chr  X:47,371,226...47,388,881 		JBrowse link
G SIRT2 sirtuin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:35,984,453...36,005,582
Ensembl chr19:44,533,965...44,554,799 		JBrowse link
G SLC45A3 solute carrier family 45 member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:181,266,533...181,289,536
Ensembl chr 1:185,552,015...185,566,359 		JBrowse link
positive regulation of L-dopa biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PARK7 Parkinsonism associated deglycase involved_in
acts_upstream_of		 IEA
ISO		 (PMID:16731528) Ensembl
ParkinsonsUK-UCL		 PMID:16731528 GO_REF:0000107 NCBI chr 1:6,722,260...6,745,915
Ensembl chr 1:7,969,280...7,993,271 		JBrowse link
positive regulation of prostaglandin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA1 annexin A1 ISO RGD PMID:8260938 RGD:2306959 NCBI chr 9:51,647,404...51,665,990
Ensembl chr 9:71,929,728...71,948,779 		JBrowse link
G AVP arginine vasopressin ISO RGD PMID:17254553 RGD:2300349 NCBI chr20:3,169,094...3,172,900 JBrowse link
G AVPR1A arginine vasopressin receptor 1A ISO RGD PMID:17254553 RGD:2300349 NCBI chr12:25,793,633...25,803,026
Ensembl chr12:26,065,882...26,075,972 		JBrowse link
G CD74 CD74 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:145,825,635...145,836,916
Ensembl chr 5:151,830,311...151,841,334 		JBrowse link
G IL1B interleukin 1 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:89,216,313...89,223,358
Ensembl chr2A:113,846,306...113,853,424 		JBrowse link
G MAPK9 mitogen-activated protein kinase 9 ISO RGD PMID:9786861 RGD:2304243 NCBI chr 5:175,437,167...175,495,469
Ensembl chr 5:182,748,381...182,795,135 		JBrowse link
G PLA2G3 phospholipase A2 group III involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:12,158,589...12,164,441
Ensembl chr22:29,995,364...30,001,160 		JBrowse link
G PLA2G4A phospholipase A2 group IVA ISO RGD PMID:16203828 RGD:1642461 NCBI chr 1:162,362,600...162,521,974
Ensembl chr 1:166,512,870...166,672,101 		JBrowse link
G PPARG peroxisome proliferator activated receptor gamma involved_in ISO (PMID:24287039) AgBase PMID:24287039 NCBI chr 3:12,215,322...12,361,669
Ensembl chr 3:12,622,397...12,705,060 		JBrowse link
G PTGS2 prostaglandin-endoperoxide synthase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:162,205,534...162,214,130
Ensembl chr 1:166,355,845...166,364,519 		JBrowse link
positive regulation of retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RDH10 retinol dehydrogenase 10 ISO RGD PMID:21138835 RGD:6771354 NCBI chr 8:69,833,320...69,863,536
Ensembl chr 8:71,481,089...71,510,689 		JBrowse link
G RDH16 retinol dehydrogenase 16 ISO RGD PMID:21138835 RGD:6771354 NCBI chr12:31,958,385...31,966,319
Ensembl chr12:32,212,746...32,219,624 		JBrowse link
positive regulation of unsaturated fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:143,275,165...143,295,283
Ensembl chr  X:153,162,412...153,182,424 		JBrowse link
G ABCD2 ATP binding cassette subfamily D member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:49,082,122...49,158,524
Ensembl chr12:49,941,914...50,011,140 		JBrowse link
proline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH18A1 aldehyde dehydrogenase 18 family member A1 involved_in IEA InterPro
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr10:92,216,639...92,267,525
Ensembl chr10:95,723,099...95,774,095 		JBrowse link
G PYCR1 pyrroline-5-carboxylate reductase 1 involved_in IEA UniProt
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr17:76,337,991...76,348,207
Ensembl chr17:82,040,824...82,045,686 		JBrowse link
G PYCR2 pyrroline-5-carboxylate reductase 2 involved_in IEA UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr 1:201,381,270...201,385,703
Ensembl chr 1:206,381,539...206,386,002 		JBrowse link
G PYCR3 pyrroline-5-carboxylate reductase 3 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 8:140,356,586...140,362,972
Ensembl chr 8:143,371,748...143,378,032 		JBrowse link
propionate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACSS1 acyl-CoA synthetase short chain family member 1 ISO RGD PMID:4334748 RGD:2317572 NCBI chr20:24,946,629...25,001,311
Ensembl chr20:25,293,511...25,349,017 		JBrowse link
G ACSS2 acyl-CoA synthetase short chain family member 2 ISO RGD PMID:4334748 RGD:2317572 NCBI chr20:31,205,104...31,256,263
Ensembl chr20:32,329,721...32,380,526 		JBrowse link
prostaglandin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD74 CD74 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:145,825,635...145,836,916
Ensembl chr 5:151,830,311...151,841,334 		JBrowse link
G DAGLB diacylglycerol lipase beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:6,995,425...7,034,279
Ensembl chr 7:6,605,250...6,634,169 		JBrowse link
G EDN1 endothelin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:12,076,312...12,142,861
Ensembl chr 6:12,462,718...12,503,545 		JBrowse link
G EDN2 endothelin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:40,777,582...40,783,410
Ensembl chr 1:42,092,811...42,098,721 		JBrowse link
G LOC100990946 group 10 secretory phospholipase A2 involved_in ISO (PMID:27292189) UniProt PMID:27292189 NCBI chr16:13,600,152...13,622,629 JBrowse link
G LOC100992102 prostaglandin E synthase 3-like involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chr 4:162,010,675...162,011,506 JBrowse link
G MIF macrophage migration inhibitory factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:4,646,986...4,647,831
Ensembl chr22:22,730,807...22,732,009 		JBrowse link
G PLA2G2A phospholipase A2 group IIA involved_in ISO (PMID:27292189) UniProt PMID:27292189 NCBI chr 1:18,930,294...18,934,563
Ensembl chr 1:19,971,084...19,977,627 		JBrowse link
G PLA2G4A phospholipase A2 group IVA involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr 1:162,362,600...162,521,974
Ensembl chr 1:166,512,870...166,672,101 		JBrowse link
G PLA2G4F phospholipase A2 group IVF involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17293613) Ensembl
MGI		 PMID:17293613 GO_REF:0000107 NCBI chr15:21,095,474...21,110,983
Ensembl chr15:39,253,819...39,271,482 		JBrowse link
G PNPLA8 patatin like phospholipase domain containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:100,456,096...100,511,836
Ensembl chr 7:113,177,202...113,230,799 		JBrowse link
G PRXL2B peroxiredoxin like 2B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:1,319,718...1,324,409 JBrowse link
G PTGDS prostaglandin D2 synthase involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr 9:108,037,994...108,042,136
Ensembl chr 9:137,006,601...137,009,680 		JBrowse link
G PTGES prostaglandin E synthase involved_in ISO
IEA		 RGD
TreeGrafter
UniProt
Ensembl		 PMID:11067848 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 RGD:67929 NCBI chr 9:100,865,702...100,880,408
Ensembl chr 9:129,522,547...129,537,020 		JBrowse link
G PTGES2 prostaglandin E synthase 2 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chr 9:99,241,257...99,249,022
Ensembl chr 9:127,912,363...127,918,036 		JBrowse link
G PTGES3 prostaglandin E synthase 3 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:17438133) RGD
Ensembl
TreeGrafter
MGI
UniProt		 PMID:10922363 PMID:17438133 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 RGD:5688071 NCBI chr12:32,221,908...32,247,228
Ensembl chr12:32,476,835...32,503,181 		JBrowse link
G PTGIS prostaglandin I2 synthase involved_in IEA
ISO		 UniProt
TreeGrafter
RGD
Ensembl
InterPro		 PMID:10359560 PMID:10536678 PMID:15684702 PMID:16094316 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 RGD:1580695 RGD:401959739 RGD:727270 RGD:8693629 NCBI chr20:45,841,238...45,905,641
Ensembl chr20:46,905,665...46,971,612 		JBrowse link
G PTGS1 prostaglandin-endoperoxide synthase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12093889) RGD
MGI
UniProt
Ensembl		 PMID:12093889 PMID:17673564 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 RGD:2300259 NCBI chr 9:93,495,365...93,517,557
Ensembl chr 9:121,837,095...121,859,283 		JBrowse link
G PTGS2 prostaglandin-endoperoxide synthase 2 involved_in ISO
IEA		 RGD
UniProt
Ensembl		 PMID:17673564 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 RGD:2300259 NCBI chr 1:162,205,534...162,214,130
Ensembl chr 1:166,355,845...166,364,519 		JBrowse link
G TBXAS1 thromboxane A synthase 1 involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr 7:131,772,947...131,958,647
Ensembl chr 7:144,255,211...144,439,523 		JBrowse link
pyruvate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGXT alanine--glyoxylate aminotransferase ISO RGD PMID:12383475 RGD:1599457 NCBI chr2B:128,125,289...128,137,091
Ensembl chr2B:246,928,784...246,939,837 		JBrowse link
G HOGA1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in ISO (PMID:21998747) BHF-UCL PMID:21998747 NCBI chr10:94,204,627...94,233,312 JBrowse link
G PKLR pyruvate kinase L/R ISO RGD PMID:4273555 PMID:5492954 RGD:2302789 RGD:2302790 NCBI chr 1:130,634,111...130,646,644
Ensembl chr 1:134,239,565...134,251,351 		JBrowse link
G PKM pyruvate kinase M1/2 ISO RGD PMID:4273555 RGD:2302790 NCBI chr15:51,149,584...51,182,193
Ensembl chr15:69,913,455...69,945,832 		JBrowse link
G SDS serine dehydratase involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:110,995,164...111,006,668
Ensembl chr12:114,377,650...114,388,839 		JBrowse link
G SRR serine racemase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:2,294,440...2,316,244
Ensembl chr17:2,182,839...2,200,704 		JBrowse link
quinolinate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HAAO 3-hydroxyanthranilate 3,4-dioxygenase involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chr2A:42,857,216...42,882,738
Ensembl chr2A:43,704,468...43,729,887 		JBrowse link
G HTT huntingtin acts_upstream_of_or_within ISO (PMID:16697652) MGI PMID:16697652 NCBI chr 4:3,215,081...3,388,587
Ensembl chr 4:3,128,718...3,283,730 		JBrowse link
G IDO1 indoleamine 2,3-dioxygenase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:39,108,310...39,123,611
Ensembl chr 8:36,617,312...36,632,352 		JBrowse link
G KMO kynurenine 3-monooxygenase involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr 1:217,094,037...217,157,827
Ensembl chr 1:222,075,268...222,138,866 		JBrowse link
G KYNU kynureninase involved_in IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chr2B:16,792,401...16,947,766
Ensembl chr2B:146,975,995...147,132,634 		JBrowse link
regulation of arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC117978823 battenin involved_in ISO (PMID:19284480) UniProt PMID:19284480
regulation of bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP7A1 cytochrome P450 family 7 subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:54,942,509...54,952,500
Ensembl chr 8:56,593,799...56,604,037 		JBrowse link
G FGFR4 fibroblast growth factor receptor 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:172,386,443...172,400,271
Ensembl chr 5:179,454,995...179,467,605 		JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069 		JBrowse link
regulation of fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EIF6 eukaryotic translation initiation factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:31,608,264...31,614,225
Ensembl chr20:32,731,097...32,737,136 		JBrowse link
G GIP gastric inhibitory polypeptide involved_in IEA InterPro GO_REF:0000002 NCBI chr17:8,573,104...8,580,424 JBrowse link
G PDK4 pyruvate dehydrogenase kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:87,540,600...87,553,673
Ensembl chr 7:101,128,060...101,141,157 		JBrowse link
G SCAP SREBF chaperone involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16054043) Ensembl
MGI		 PMID:16054043 GO_REF:0000107 NCBI chr 3:47,314,535...47,379,455
Ensembl chr 3:48,414,012...48,479,845 		JBrowse link
regulation of prostaglandin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FABP5 fatty acid binding protein 5 involved_in ISO (PMID:29440395) UniProt PMID:29440395 NCBI chr 8:77,803,369...77,807,630
Ensembl chr 8:79,426,684...79,430,879 		JBrowse link
retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 ISO RGD PMID:21138835 RGD:6771354 NCBI chr 9:51,737,305...51,916,648
Ensembl chr 9:71,680,890...71,814,085 		JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 involved_in ISO
IEA		 RGD
Ensembl		 PMID:15950969 PMID:21138835 GO_REF:0000107 RGD:6771322 RGD:6771354 NCBI chr15:36,925,443...37,038,288
Ensembl chr15:55,237,101...55,557,168 		JBrowse link
G ALDH1A3 aldehyde dehydrogenase 1 family member A3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11013254), (PMID:11044606), (PMID:16241904) RGD
MGI
Ensembl		 PMID:11013254 PMID:11044606 PMID:15950969 PMID:16241904 PMID:21138835 GO_REF:0000107 RGD:6771322 RGD:6771354 NCBI chr15:79,603,893...79,640,866
Ensembl chr15:98,891,770...98,928,396 		JBrowse link
G CRABP2 cellular retinoic acid binding protein 2 ISO RGD PMID:15950969 RGD:6771322 NCBI chr 1:132,043,097...132,049,366
Ensembl chr 1:135,864,807...135,870,145 		JBrowse link
G DHRS9 dehydrogenase/reductase 9 ISO RGD PMID:15950969 PMID:21138835 RGD:6771322 RGD:6771354 NCBI chr2B:56,347,489...56,376,463
Ensembl chr2B:173,811,932...173,842,816 		JBrowse link
G RBP1 retinol binding protein 1 involved_in ISO
IEA		 RGD
InterPro		 PMID:15950969 GO_REF:0000002 RGD:6771322 NCBI chr 3:136,554,315...136,576,682
Ensembl chr 3:144,153,937...144,176,209 		JBrowse link
G RDH10 retinol dehydrogenase 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17473173) Ensembl
MGI		 PMID:17473173 GO_REF:0000107 NCBI chr 8:69,833,320...69,863,536
Ensembl chr 8:71,481,089...71,510,689 		JBrowse link
selenocysteine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100970229 selenide, water dikinase 2-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:170,058,006...170,060,257 JBrowse link
G SEPHS1 selenophosphate synthetase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:13,316,013...13,347,087
Ensembl chr10:13,649,672...13,679,724 		JBrowse link
G SEPHS2 selenophosphate synthetase 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17346238) MGI
TreeGrafter		 PMID:17346238 GO_REF:0000118 NCBI chr16:24,523,111...24,525,390 JBrowse link
serine family amino acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:44,969,573...45,041,296
Ensembl chr14:63,223,484...63,293,881 		JBrowse link
short-chain fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OXSM 3-oxoacyl-ACP synthase, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:25,683,801...25,697,227
Ensembl chr 3:26,021,806...26,026,222 		JBrowse link
taurine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDO1 cysteine dioxygenase type 1 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000104 NCBI chr 5:111,159,041...111,170,965
Ensembl chr 5:116,955,295...116,967,506 		JBrowse link
G CSAD cysteine sulfinic acid decarboxylase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24639894) Ensembl
TreeGrafter
MGI		 PMID:24639894 GO_REF:0000107 GO_REF:0000118 NCBI chr12:35,572,064...35,598,077
Ensembl chr12:36,354,437...36,379,738 		JBrowse link
G FMO1 flavin containing dimethylaniline monoxygenase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:146,742,505...146,778,560
Ensembl chr 1:150,456,729...150,492,527 		JBrowse link
G FMO3 flavin containing dimethylaniline monoxygenase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:146,583,570...146,611,720
Ensembl chr 1:150,298,957...150,325,850 		JBrowse link
threonine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G THNSL2 threonine synthase like 2 NOT|acts_upstream_of_or_within ISO (PMID:17034760) MGI PMID:17034760 NCBI chr2A:87,303,022...87,319,494
Ensembl chr2A:89,212,442...89,228,446 		JBrowse link
tyrosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAH phenylalanine hydroxylase involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:16953590 GO_REF:0000118 RGD:1601531 NCBI chr12:100,417,267...100,496,888
Ensembl chr12:103,811,761...103,891,726 		JBrowse link
tyrosine biosynthetic process, by oxidation of phenylalanine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAH phenylalanine hydroxylase involved_in ISO
IEA		 RGD
GOC		 PMID:10839989 GO_REF:0000108 RGD:1601535 NCBI chr12:100,417,267...100,496,888
Ensembl chr12:103,811,761...103,891,726 		JBrowse link
G PCBD1 pterin-4 alpha-carbinolamine dehydratase 1 involved_in IEA GOC GO_REF:0000108 NCBI chr10:67,353,903...67,359,073
Ensembl chr10:69,878,773...69,881,174 		JBrowse link
G PCBD2 pterin-4 alpha-carbinolamine dehydratase 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 5:130,303,900...130,364,899
Ensembl chr 5:136,446,730...136,497,011 		JBrowse link
UDP-glucuronate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UGDH UDP-glucose 6-dehydrogenase involved_in IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000107 NCBI chr 4:33,827,532...33,856,204
Ensembl chr 4:39,681,300...39,708,215 		JBrowse link
G UGP2 UDP-glucose pyrophosphorylase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:63,906,778...63,959,346
Ensembl chr2A:65,043,871...65,084,175 		JBrowse link
unsaturated fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DECR2 2,4-dienoyl-CoA reductase 2 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr16:395,158...405,928 JBrowse link
G ELOVL1 ELOVL fatty acid elongase 1 involved_in IEA UniProt GO_REF:0000104 NCBI chr 1:42,664,818...42,686,475
Ensembl chr 1:44,044,693...44,048,769 		JBrowse link
G ELOVL2 ELOVL fatty acid elongase 2 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000104 NCBI chr 6:10,820,972...10,884,609
Ensembl chr 6:11,097,903...11,127,911 		JBrowse link
G ELOVL3 ELOVL fatty acid elongase 3 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000104 NCBI chr10:98,788,505...98,833,146
Ensembl chr10:102,297,291...102,300,594 		JBrowse link
G ELOVL4 ELOVL fatty acid elongase 4 involved_in IEA UniProt GO_REF:0000104 NCBI chr 6:77,798,058...77,830,840
Ensembl chr 6:81,068,882...81,102,050 		JBrowse link
G ELOVL5 ELOVL fatty acid elongase 5 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000104 NCBI chr 6:52,822,038...52,902,122
Ensembl chr 6:54,451,887...54,485,878 		JBrowse link
G ELOVL6 ELOVL fatty acid elongase 6 involved_in IEA UniProt GO_REF:0000104 NCBI chr 4:102,545,815...102,695,536
Ensembl chr 4:113,110,466...113,260,444 		JBrowse link
G ELOVL7 ELOVL fatty acid elongase 7 involved_in IEA UniProt GO_REF:0000104 NCBI chr 5:53,156,518...53,248,839
Ensembl chr 5:54,853,330...54,888,930 		JBrowse link
G FADS1 fatty acid desaturase 1 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:10601301) RGD
UniProt
MGI		 PMID:10601301 PMID:11414679 GO_REF:0000041 RGD:632758 NCBI chr11:57,101,553...57,116,243
Ensembl chr11:60,462,420...60,476,798 		JBrowse link
G FADS2 fatty acid desaturase 2 involved_in IEA UniProt GO_REF:0000041 NCBI chr11:57,192,881...57,232,574
Ensembl chr11:60,476,082...60,591,649 		JBrowse link
G FADS3 fatty acid desaturase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28838557) UniProt
Ensembl
MGI		 PMID:28838557 GO_REF:0000041 GO_REF:0000107 NCBI chr11:57,238,616...57,257,331
Ensembl chr11:60,597,527...60,615,519 		JBrowse link
G SCD stearoyl-CoA desaturase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr10:96,948,212...96,965,633
Ensembl chr10:100,429,615...100,442,776 		JBrowse link
G SCD5 stearoyl-CoA desaturase 5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:41,404,736...41,574,802
Ensembl chr 4:47,255,546...47,425,894 		JBrowse link
uroporphyrinogen III biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UROS uroporphyrinogen III synthase involved_in ISO
IEA		 RGD
TreeGrafter
InterPro
Ensembl		 PMID:17763925 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:4144811 NCBI chr10:122,346,072...122,384,405
Ensembl chr10:126,613,732...126,648,363 		JBrowse link
very long-chain fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ELOVL1 ELOVL fatty acid elongase 1 involved_in IEA UniProt
TreeGrafter
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:42,664,818...42,686,475
Ensembl chr 1:44,044,693...44,048,769 		JBrowse link
G ELOVL2 ELOVL fatty acid elongase 2 involved_in IEA Ensembl
TreeGrafter
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:10,820,972...10,884,609
Ensembl chr 6:11,097,903...11,127,911 		JBrowse link
G ELOVL3 ELOVL fatty acid elongase 3 involved_in IEA InterPro
TreeGrafter
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr10:98,788,505...98,833,146
Ensembl chr10:102,297,291...102,300,594 		JBrowse link
G ELOVL4 ELOVL fatty acid elongase 4 involved_in IEA InterPro
TreeGrafter
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:77,798,058...77,830,840
Ensembl chr 6:81,068,882...81,102,050 		JBrowse link
G ELOVL5 ELOVL fatty acid elongase 5 involved_in IEA Ensembl
TreeGrafter
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:52,822,038...52,902,122
Ensembl chr 6:54,451,887...54,485,878 		JBrowse link
G ELOVL6 ELOVL fatty acid elongase 6 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 4:102,545,815...102,695,536
Ensembl chr 4:113,110,466...113,260,444 		JBrowse link
G ELOVL7 ELOVL fatty acid elongase 7 involved_in IEA Ensembl
TreeGrafter
InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:53,156,518...53,248,839
Ensembl chr 5:54,853,330...54,888,930 		JBrowse link
G HACD1 3-hydroxyacyl-CoA dehydratase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:17,911,158...17,940,075
Ensembl chr10:18,183,125...18,209,361 		JBrowse link
G HACD2 3-hydroxyacyl-CoA dehydratase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:120,588,195...120,684,177 JBrowse link
G HACD3 3-hydroxyacyl-CoA dehydratase 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr15:44,473,542...44,520,885
Ensembl chr15:62,752,762...62,799,950 		JBrowse link
G HACD4 3-hydroxyacyl-CoA dehydratase 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:20,811,857...20,839,900
Ensembl chr 9:21,470,670...21,495,350 		JBrowse link
G TECR trans-2,3-enoyl-CoA reductase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr19:14,092,967...14,129,025
Ensembl chr19:14,936,911...14,972,784 		JBrowse link
G TECRL trans-2,3-enoyl-CoA reductase like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:59,639,203...59,771,739
Ensembl chr 4:66,013,408...66,144,853 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19447
    cellular process 19000
      metabolic process 12941
        small molecule metabolic process 1677
          organic acid metabolic process 909
            organic acid biosynthetic process 302
              alkanesulfonate biosynthetic process + 4
              carboxylic acid biosynthetic process + 298
              coenzyme M biosynthetic process 0
              teichoic acid biosynthetic process + 0
              teichuronic acid biosynthetic process 0
paths to the root