ACSF3 (acyl-CoA synthetase family member 3) - Rat Genome Database

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Gene: ACSF3 (acyl-CoA synthetase family member 3) Pan paniscus
Analyze
Symbol: ACSF3
Name: acyl-CoA synthetase family member 3
RGD ID: 11991253
Description: ENCODES a protein that exhibits acid-thiol ligase activity (ortholog); malonyl-CoA synthetase activity (ortholog); very long-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN fatty acid biosynthetic process (ortholog); fatty acid metabolic process (ortholog); malonate catabolic process (ortholog); ASSOCIATED WITH 16Q24.3 Microdeletion Syndrome (ortholog); autosomal recessive chronic granulomatous disease cytochrome b-negative (ortholog); combined malonic and methylmalonic acidemia (ortholog); FOUND IN mitochondrion (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: acyl-CoA synthetase family member 3, mitochondrial; malonate--CoA ligase ACSF3, mitochondrial
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11689,465,691 - 89,524,210 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1689,467,997 - 89,523,825 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01669,842,709 - 69,907,075 (+)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
ACSF3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11689,465,691 - 89,524,210 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1689,467,997 - 89,523,825 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01669,842,709 - 69,907,075 (+)NCBIMhudiblu_PPA_v0panPan3
ACSF3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1689,088,375 - 89,164,121 (+)EnsemblGRCh38hg38GRCh38
GRCh381689,093,847 - 89,160,556 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371689,160,260 - 89,222,641 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361687,687,825 - 87,749,670 (+)NCBINCBI36hg18NCBI36
Celera1674,226,564 - 74,287,794 (+)NCBI
Cytogenetic Map16q24.3NCBI
HuRef1674,859,689 - 74,921,455 (+)NCBIHuRef
CHM1_11690,571,314 - 90,633,459 (+)NCBICHM1_1
Acsf3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398123,502,209 - 123,544,626 (+)NCBIGRCm39mm39
GRCm39 Ensembl8123,502,225 - 123,544,619 (+)Ensembl
GRCm388122,775,470 - 122,817,887 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8122,775,486 - 122,817,880 (+)EnsemblGRCm38mm10GRCm38
MGSCv378125,299,405 - 125,341,781 (+)NCBIGRCm37mm9NCBIm37
MGSCv368125,666,626 - 125,703,971 (+)NCBImm8
Celera8127,007,875 - 127,052,230 (+)NCBICelera
Cytogenetic Map8E1NCBI
Acsf3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21950,835,116 - 50,875,557 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl1950,835,221 - 50,875,553 (+)Ensembl
Rnor_6.01955,594,801 - 55,635,312 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1955,594,831 - 55,635,122 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01966,302,623 - 66,342,436 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41953,066,291 - 53,106,673 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1950,073,106 - 50,113,121 (+)NCBICelera
Cytogenetic Map19q12NCBI
Acsf3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555412,837,448 - 2,876,316 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555412,837,487 - 2,876,220 (+)NCBIChiLan1.0ChiLan1.0
ACSF3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1564,288,339 - 64,338,596 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl564,289,295 - 64,414,637 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha564,304,235 - 64,354,696 (-)NCBI
ROS_Cfam_1.0564,519,689 - 64,569,550 (-)NCBI
UMICH_Zoey_3.1564,539,014 - 64,589,483 (-)NCBI
UNSW_CanFamBas_1.0564,377,020 - 64,427,451 (-)NCBI
UU_Cfam_GSD_1.0564,783,458 - 64,833,225 (-)NCBI
Acsf3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934924,946,656 - 24,983,470 (-)NCBI
SpeTri2.0NW_004936641700,218 - 736,875 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ACSF3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6663,109 - 712,015 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16663,201 - 708,800 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26826,070 - 843,606 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ACSF3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1574,464,357 - 74,526,173 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl574,464,651 - 74,525,660 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660471,014,211 - 1,082,877 (-)NCBIVero_WHO_p1.0
Acsf3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624746627,089 - 655,922 (-)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000044775   ⟹   ENSPPAP00000021970
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1689,467,997 - 89,523,825 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000044782   ⟹   ENSPPAP00000021977
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1689,467,997 - 89,523,825 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000044787   ⟹   ENSPPAP00000021982
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1689,467,997 - 89,489,721 (+)Ensembl
RefSeq Acc Id: XM_003805773   ⟹   XP_003805821
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11689,465,691 - 89,524,210 (+)NCBI
Mhudiblu_PPA_v01669,847,445 - 69,907,075 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034940918   ⟹   XP_034796809
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01669,842,726 - 69,907,075 (+)NCBI
RefSeq Acc Id: XM_034940919   ⟹   XP_034796810
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01669,842,717 - 69,907,075 (+)NCBI
RefSeq Acc Id: XM_034940920   ⟹   XP_034796811
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01669,842,723 - 69,907,075 (+)NCBI
RefSeq Acc Id: XM_034940921   ⟹   XP_034796812
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01669,842,709 - 69,907,075 (+)NCBI
RefSeq Acc Id: XM_034940922   ⟹   XP_034796813
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01669,842,720 - 69,907,075 (+)NCBI
RefSeq Acc Id: XR_004667004
RefSeq Status:
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01669,847,444 - 69,906,712 (+)NCBI
Reference Sequences
RefSeq Acc Id: XP_003805821   ⟸   XM_003805773
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_034796812   ⟸   XM_034940921
- Peptide Label: isoform X2
RefSeq Acc Id: XP_034796810   ⟸   XM_034940919
- Peptide Label: isoform X2
RefSeq Acc Id: XP_034796813   ⟸   XM_034940922
- Peptide Label: isoform X3
RefSeq Acc Id: XP_034796811   ⟸   XM_034940920
- Peptide Label: isoform X2
RefSeq Acc Id: XP_034796809   ⟸   XM_034940918
- Peptide Label: isoform X2
RefSeq Acc Id: ENSPPAP00000021970   ⟸   ENSPPAT00000044775
RefSeq Acc Id: ENSPPAP00000021982   ⟸   ENSPPAT00000044787
RefSeq Acc Id: ENSPPAP00000021977   ⟸   ENSPPAT00000044782


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000034173 Ensembl, ENTREZGENE
NCBI Gene ACSF3 ENTREZGENE