HAAO (3-hydroxyanthranilate 3,4-dioxygenase) - Rat Genome Database

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Gene: HAAO (3-hydroxyanthranilate 3,4-dioxygenase) Pan paniscus
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Symbol: HAAO
Name: 3-hydroxyanthranilate 3,4-dioxygenase
RGD ID: 12023550
Description: ENCODES a protein that exhibits 3-hydroxyanthranilate 3,4-dioxygenase activity (ortholog); iron ion binding (ortholog); oxygen binding (ortholog); INVOLVED IN quinolinate metabolic process (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH atherosclerosis (ortholog); Huntington's disease (ortholog); Hypercholesterolemia (ortholog); FOUND IN mitochondrial membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21283,605,885 - 83,652,485 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A83,606,853 - 83,657,841 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A42,857,216 - 42,882,738 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A43,704,468 - 43,729,886 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A43,704,468 - 43,729,887 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
HAAO
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21283,605,885 - 83,652,485 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A83,606,853 - 83,657,841 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A42,857,216 - 42,882,738 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A43,704,468 - 43,729,886 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A43,704,468 - 43,729,887 (-)Ensemblpanpan1.1panPan2
HAAO
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38242,767,089 - 42,792,583 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl242,767,089 - 42,792,593 (-)EnsemblGRCh38hg38GRCh38
GRCh37242,994,229 - 43,019,723 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36242,847,734 - 42,873,219 (-)NCBINCBI36Build 36hg18NCBI36
Build 34242,905,880 - 42,931,366NCBI
Celera242,833,485 - 42,858,995 (-)NCBICelera
Cytogenetic Map2p21NCBI
HuRef242,728,505 - 42,754,300 (-)NCBIHuRef
CHM1_1242,923,585 - 42,949,123 (-)NCBICHM1_1
T2T-CHM13v2.0242,772,378 - 42,797,833 (-)NCBIT2T-CHM13v2.0
Haao
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391784,138,777 - 84,157,589 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1784,138,585 - 84,155,392 (-)EnsemblGRCm39 Ensembl
GRCm381783,831,348 - 83,848,981 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1783,831,156 - 83,847,963 (-)EnsemblGRCm38mm10GRCm38
MGSCv371784,230,694 - 84,246,130 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361783,739,421 - 83,756,289 (-)NCBIMGSCv36mm8
Celera1788,186,650 - 88,204,249 (-)NCBICelera
Cytogenetic Map17E4NCBI
cM Map1754.85NCBI
Haao
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8616,598,325 - 16,617,590 (+)NCBIGRCr8
mRatBN7.2610,845,235 - 10,864,863 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl610,845,771 - 10,864,877 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx611,140,636 - 11,153,719 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0611,449,968 - 11,463,051 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0610,962,770 - 10,975,905 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.067,045,145 - 7,059,227 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl67,045,152 - 7,058,314 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.066,994,168 - 7,008,145 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.467,197,352 - 7,210,456 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.167,197,351 - 7,210,456 (-)NCBI
Celera610,553,178 - 10,565,875 (+)NCBICelera
Cytogenetic Map6q12NCBI
Haao
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544110,110,380 - 10,129,015 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544110,114,863 - 10,128,948 (-)NCBIChiLan1.0ChiLan1.0
HAAO
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11045,368,157 - 45,379,521 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1045,368,178 - 45,379,160 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1045,234,849 - 45,243,211 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01046,244,310 - 46,257,893 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11045,953,712 - 45,967,274 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01046,242,070 - 46,255,650 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01046,426,251 - 46,439,827 (-)NCBIUU_Cfam_GSD_1.0
Haao
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629237,521,284 - 37,557,728 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365088,971,477 - 8,986,404 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365088,971,516 - 8,987,235 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HAAO
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl397,580,851 - 97,595,021 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1397,580,756 - 97,595,033 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
HAAO
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11464,460,553 - 64,485,731 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1464,460,703 - 64,485,378 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604547,421,217 - 47,446,709 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Haao
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473824,407,551 - 24,421,561 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473824,409,531 - 24,421,384 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000000417   ⟹   ENSPPAP00000000114
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2A43,704,468 - 43,729,887 (-)Ensembl
RefSeq Acc Id: XM_003809128   ⟹   XP_003809176
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21283,623,783 - 83,652,475 (+)NCBI
NHGRI_mPanPan12A83,612,373 - 83,657,841 (+)NCBI
Mhudiblu_PPA_v02A42,857,216 - 42,882,738 (-)NCBI
PanPan1.12A43,704,468 - 43,729,886 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008961303   ⟹   XP_008959551
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21283,623,783 - 83,652,477 (+)NCBI
NHGRI_mPanPan12A83,612,373 - 83,657,841 (+)NCBI
Mhudiblu_PPA_v02A42,857,216 - 42,882,738 (-)NCBI
PanPan1.12A43,704,468 - 43,729,886 (-)NCBI
Sequence:
RefSeq Acc Id: XM_055108030   ⟹   XP_054964005
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21283,623,783 - 83,652,483 (+)NCBI
NHGRI_mPanPan12A83,612,373 - 83,657,841 (+)NCBI
RefSeq Acc Id: XM_055108031   ⟹   XP_054964006
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21283,623,783 - 83,652,485 (+)NCBI
NHGRI_mPanPan12A83,612,373 - 83,657,841 (+)NCBI
RefSeq Acc Id: XR_008624377
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21283,605,885 - 83,650,630 (+)NCBI
NHGRI_mPanPan12A83,606,853 - 83,657,841 (+)NCBI
RefSeq Acc Id: XR_010109301
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21283,623,783 - 83,650,630 (+)NCBI
RefSeq Acc Id: XR_010109302
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21283,623,783 - 83,650,630 (+)NCBI
Protein Sequences
Protein RefSeqs XP_003809176 (Get FASTA)   NCBI Sequence Viewer  
  XP_008959551 (Get FASTA)   NCBI Sequence Viewer  
  XP_054964005 (Get FASTA)   NCBI Sequence Viewer  
  XP_054964006 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000000114
  ENSPPAP00000000114.1
RefSeq Acc Id: XP_008959551   ⟸   XM_008961303
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_003809176   ⟸   XM_003809128
- Peptide Label: isoform X2
- UniProtKB: A0A2R8Z9N2 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSPPAP00000000114   ⟸   ENSPPAT00000000417
RefSeq Acc Id: XP_054964005   ⟸   XM_055108030
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054964006   ⟸   XM_055108031
- Peptide Label: isoform X3


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000000403 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000000417.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.120.10 UniProtKB/TrEMBL
InterPro 3hydroanth_dOase UniProtKB/TrEMBL
  3hydroanth_dOase_met UniProtKB/TrEMBL
  RmlC-like_jellyroll UniProtKB/TrEMBL
  RmlC_Cupin_sf UniProtKB/TrEMBL
KEGG Report pps:100996154 UniProtKB/TrEMBL
NCBI Gene HAAO ENTREZGENE
PANTHER 3-HYDROXYANTHRANILATE 3,4-DIOXYGENASE UniProtKB/TrEMBL
  PTHR15497 UniProtKB/TrEMBL
Pfam 3-HAO UniProtKB/TrEMBL
PIRSF 3hydroanth_dOase_animal UniProtKB/TrEMBL
Superfamily-SCOP SSF51182 UniProtKB/TrEMBL
UniProt A0A2R8Z9N2 ENTREZGENE, UniProtKB/TrEMBL