CSAD (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 10 | 41,004,607 - 41,030,621 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 12 | 41,001,352 - 41,027,386 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 12 | 35,572,064 - 35,598,077 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 12 | 36,354,360 - 36,379,738 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 12 | 36,354,437 - 36,379,738 (+) | Ensembl | panpan1.1 | | panPan2 | |
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CSAD (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 12 | 53,157,663 - 53,181,351 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 12 | 53,157,663 - 53,180,925 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 12 | 53,551,447 - 53,574,709 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 12 | 51,837,714 - 51,860,647 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 12 | 51,837,714 - 51,860,647 | NCBI | | | | | Celera | 12 | 53,200,050 - 53,223,033 (-) | NCBI | | Celera | | | Cytogenetic Map | 12 | q13.13 | NCBI | | | | | HuRef | 12 | 50,594,015 - 50,617,263 (-) | NCBI | | HuRef | | | CHM1_1 | 12 | 53,517,875 - 53,541,124 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 12 | 53,123,259 - 53,147,240 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Csad (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 15 | 102,085,432 - 102,112,685 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 15 | 102,085,434 - 102,113,159 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 15 | 102,176,997 - 102,205,052 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 15 | 102,176,999 - 102,204,724 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 15 | 102,007,429 - 102,019,474 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 15 | 102,005,032 - 102,017,077 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 15 | 104,331,920 - 104,345,992 (-) | NCBI | | Celera | | | Cytogenetic Map | 15 | F2 | NCBI | | | | | cM Map | 15 | 57.35 | NCBI | | | | |
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Csad (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 7 | 135,187,175 - 135,216,495 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 7 | 133,308,571 - 133,337,914 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 7 | 133,308,574 - 133,337,615 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 7 | 135,069,925 - 135,098,194 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 7 | 137,299,292 - 137,327,561 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 7 | 137,283,882 - 137,312,672 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 7 | 143,781,520 - 143,810,880 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 7 | 143,781,702 - 143,793,970 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 7 | 141,579,061 - 141,608,043 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 7 | 140,917,995 - 140,944,405 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 7 | 140,994,262 - 141,036,798 (-) | NCBI | | | | | Celera | 7 | 129,743,152 - 129,755,012 (-) | NCBI | | Celera | | | Cytogenetic Map | 7 | q36 | NCBI | | | | |
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Csad (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955458 | 423,085 - 433,429 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955458 | 423,156 - 449,763 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CSAD (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 27 | 2,005,482 - 2,036,703 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 27 | 2,005,355 - 2,036,228 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 27 | 44,212,975 - 44,245,324 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 27 | 2,008,554 - 2,041,174 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 27 | 2,028,291 - 2,041,167 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 27 | 2,027,628 - 2,058,651 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 27 | 2,011,598 - 2,043,893 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 27 | 44,613,914 - 44,645,943 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Csad (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404945 | 62,689,751 - 62,717,369 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936512 | 10,447,461 - 10,474,985 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936512 | 10,447,457 - 10,475,231 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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CSAD (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 5 | 18,379,288 - 18,410,646 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 5 | 18,379,340 - 18,410,446 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 5 | 18,793,689 - 18,805,868 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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CSAD (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 11 | 49,256,629 - 49,288,367 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 11 | 49,256,628 - 49,288,112 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666037 | 196,772,440 - 196,805,680 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Csad (Heterocephalus glaber - naked mole-rat) |
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