IDO1 (indoleamine 2,3-dioxygenase 1) - Rat Genome Database
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Gene: IDO1 (indoleamine 2,3-dioxygenase 1) Pan paniscus
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Symbol: IDO1
Name: indoleamine 2,3-dioxygenase 1
RGD ID: 11974812
Description: ENCODES a protein that exhibits amino acid binding (ortholog); indoleamine 2,3-dioxygenase activity (ortholog); oxygen binding (ortholog); INVOLVED IN inflammatory response (ortholog); kynurenic acid biosynthetic process (ortholog); multicellular organismal response to stress (ortholog); PARTICIPATES IN kynurenine metabolic pathway; tryptophan metabolic pathway; ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); Acute Lung Injury (ortholog); Animal Toxoplasmosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); smooth muscle contractile fiber (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1836,606,721 - 36,632,371 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl836,617,312 - 36,632,352 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0839,108,310 - 39,123,611 (+)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Molecular Pathway Annotations     Click to see Annotation Detail View
References

Genomics

Comparative Map Data
IDO1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1836,606,721 - 36,632,371 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl836,617,312 - 36,632,352 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0839,108,310 - 39,123,611 (+)NCBIMhudiblu_PPA_v0panPan3
IDO1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl839,902,275 - 39,928,790 (+)EnsemblGRCh38hg38GRCh38
GRCh38839,913,891 - 39,928,790 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37839,771,328 - 39,786,309 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36839,890,485 - 39,905,107 (+)NCBINCBI36hg18NCBI36
Build 34839,890,484 - 39,905,102NCBI
Celera838,723,061 - 38,737,682 (+)NCBI
Cytogenetic Map8p11.21NCBI
HuRef838,304,038 - 38,319,017 (+)NCBIHuRef
CHM1_1839,817,930 - 39,832,909 (+)NCBICHM1_1
Ido1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39825,074,149 - 25,086,968 (-)NCBIGRCm39mm39
GRCm38824,584,133 - 24,596,952 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl824,584,136 - 24,597,009 (-)EnsemblGRCm38mm10GRCm38
MGSCv37825,694,613 - 25,707,481 (-)NCBIGRCm37mm9NCBIm37
MGSCv36826,049,686 - 26,062,554 (-)NCBImm8
Celera826,068,313 - 26,081,132 (-)NCBICelera
Cytogenetic Map8A2NCBI
Ido1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01672,216,326 - 72,228,098 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1672,216,326 - 72,228,098 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01671,866,330 - 71,878,339 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41671,866,340 - 71,878,373 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11671,866,604 - 71,878,638 (+)NCBI
Celera1665,330,156 - 65,341,814 (+)NCBICelera
Cytogenetic Map16q12.5NCBI
Ido1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555362,943,611 - 2,955,829 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555362,944,770 - 2,955,829 (-)NCBIChiLan1.0ChiLan1.0
IDO1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1625,391,754 - 25,407,048 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11625,391,759 - 25,407,161 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Ido1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_004936843658,058 - 672,662 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IDO1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl179,245,196 - 9,260,491 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1179,245,283 - 9,260,140 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21710,913,978 - 10,928,837 (-)NCBISscrofa10.2Sscrofa10.2susScr3
IDO1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1837,930,910 - 37,950,790 (+)NCBI
ChlSab1.1 Ensembl837,930,562 - 37,946,505 (+)Ensembl
Ido1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247803,684,941 - 3,697,506 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000034513   ⟹   ENSPPAP00000011852
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl836,617,312 - 36,632,352 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000034516   ⟹   ENSPPAP00000011855
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl836,617,951 - 36,632,118 (+)Ensembl
RefSeq Acc Id: XM_003823308   ⟹   XP_003823356
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1836,617,312 - 36,632,371 (+)NCBI
Mhudiblu_PPA_v0839,108,310 - 39,123,611 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024929987   ⟹   XP_024785755
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1836,617,881 - 36,632,371 (+)NCBI
Mhudiblu_PPA_v0839,108,870 - 39,123,611 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024929988   ⟹   XP_024785756
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1836,617,881 - 36,632,371 (+)NCBI
Mhudiblu_PPA_v0839,108,872 - 39,123,611 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003823356 (Get FASTA)   NCBI Sequence Viewer  
  XP_024785755 (Get FASTA)   NCBI Sequence Viewer  
  XP_024785756 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_003823356   ⟸   XM_003823308
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_024785755   ⟸   XM_024929987
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_024785756   ⟸   XM_024929988
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: ENSPPAP00000011855   ⟸   ENSPPAT00000034516
RefSeq Acc Id: ENSPPAP00000011852   ⟸   ENSPPAT00000034513


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000029122 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSPPAP00000011852 ENTREZGENE, UniProtKB/TrEMBL
  ENSPPAP00000011855 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000034513 UniProtKB/TrEMBL
  ENSPPAT00000034516 UniProtKB/TrEMBL
InterPro Indolamine_dOase UniProtKB/TrEMBL
  Trp/Indoleamine_2_3_dOase-like UniProtKB/TrEMBL
KEGG Report pps:100970596 UniProtKB/TrEMBL
NCBI Gene IDO1 ENTREZGENE
PANTHER PTHR28657 UniProtKB/TrEMBL
Pfam IDO UniProtKB/TrEMBL
PROSITE IDO_1 UniProtKB/TrEMBL
  IDO_2 UniProtKB/TrEMBL
Superfamily-SCOP SSF140959 UniProtKB/TrEMBL
UniProt A0A2R9A3G1_PANPA UniProtKB/TrEMBL
  A0A2R9A897_PANPA UniProtKB/TrEMBL