Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:carboxylic acid biosynthetic process
go back to main search page
Accession:GO:0046394 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of carboxylic acids, any organic acid containing one or more carboxyl (-COOH) groups.
Synonyms:exact_synonym: carboxylic acid anabolism;   carboxylic acid biosynthesis;   carboxylic acid formation;   carboxylic acid synthesis



show annotations for term's descendants           Sort by:
'de novo' L-methionine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhmt betaine-homocysteine S-methyltransferase involved_in ISO
IEA
(PMID:10529246)
GO_REF:0000107
RGD
Ensembl
PMID:10529246 GO_REF:0000107 NCBI chr 2:24,859,871...24,879,449
Ensembl chr 2:24,859,873...24,879,742
JBrowse link
10-formyltetrahydrofolate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO
IEA
(PMID:1881876)
(PMID:23704330)
GO_REF:0000107
RGD
Ensembl
PMID:1881876 PMID:23704330 GO_REF:0000107 NCBI chr 6:94,977,862...95,045,375
Ensembl chr 6:94,977,862...95,045,372
JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like involved_in ISO
IBA
(PMID:12937168)
GO_REF:0000033
RGD
GO_Central
PMID:12937168 GO_REF:0000033 NCBI chr 1:40,443,926...40,632,911
Ensembl chr 1:40,444,008...40,632,905
JBrowse link
2-oxobutyrate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Thnsl2 threonine synthase-like 2 involved_in IEA
ISO
IBA
GO_REF:0000107
(PMID:17034760)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:17034760 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:103,112,974...103,132,122
Ensembl chr 4:103,112,963...103,132,017
JBrowse link
9-cis-retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:11876656)
Ensembl
RGD
PMID:11876656 GO_REF:0000107 NCBI chr 1:218,000,470...218,152,962
Ensembl chr 1:218,042,127...218,152,961
JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO (PMID:11876656) RGD PMID:11876656 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107
JBrowse link
G Aldh8a1 aldehyde dehydrogenase 8 family, member A1 acts_upstream_of_or_within ISO (PMID:11876656) RGD PMID:11876656 NCBI chr 1:16,183,940...16,203,385
Ensembl chr 1:16,183,940...16,203,385
JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 IDA 9-cis- and all-trans-retinoic acid synthesized from 9-cis- and all-trans-retinal RGD PMID:8765131 RGD:2306683 NCBI chr 8:58,096,021...58,102,130
Ensembl chr 8:58,096,077...58,102,125
JBrowse link
G Dhrs9 dehydrogenase/reductase 9 involved_in ISO
ISS
(PMID:11304534)
GO_REF:0000024
RGD
UniProt
PMID:11304534 GO_REF:0000024 NCBI chr 3:54,147,834...54,170,052
Ensembl chr 3:54,147,803...54,220,241
JBrowse link
G Rdh9 retinol dehydrogenase 9 acts_upstream_of_or_within ISO (PMID:11876656) RGD PMID:11876656 NCBI chr 7:63,642,305...63,645,149 JBrowse link
acetate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acss1 acyl-CoA synthetase short-chain family member 1 IDA RGD PMID:4334748 RGD:2317572 NCBI chr 3:139,450,383...139,500,325
Ensembl chr 3:139,450,383...139,500,325
JBrowse link
G Acss2 acyl-CoA synthetase short-chain family member 2 IDA RGD PMID:4334748 RGD:2317572 NCBI chr 3:144,003,808...144,047,452
Ensembl chr 3:144,004,336...144,059,675
JBrowse link
arginine biosynthetic process via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr12:26,659,664...26,677,136
Ensembl chr12:26,659,565...26,679,662
JBrowse link
G Otc ornithine transcarbamylase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:12,453,834...12,529,954
Ensembl chr  X:12,453,834...12,566,918
JBrowse link
asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asns asparagine synthetase (glutamine-hydrolyzing) involved_in
acts_upstream_of_or_within
IDA
IBA
ISO
GO_REF:0000033
(PMID:2573597)
GO_Central
RGD
PMID:2573597 PMID:2887559 GO_REF:0000033, RGD:2316002 NCBI chr 4:35,784,995...35,803,474
Ensembl chr 4:35,785,237...35,803,423
JBrowse link
G Asnsd1 asparagine synthetase domain containing 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:48,126,808...48,139,073
Ensembl chr 9:48,126,808...48,139,073
JBrowse link
aspartate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
(PMID:4193185)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:4193185 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:242,357,293...242,381,535
Ensembl chr 1:242,357,306...242,380,633
JBrowse link
G Got1l1 glutamic-oxaloacetic transaminase 1-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:64,860,308...64,873,656
Ensembl chr16:64,860,704...64,866,162
JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within ISO (PMID:4193185) RGD PMID:4193185 NCBI chr19:9,174,304...9,199,995
Ensembl chr19:9,174,311...9,199,994
JBrowse link
beta-alanine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:206,609,043...207,474,982
Ensembl chr 2:206,609,122...207,474,982
JBrowse link
G Upb1 beta-ureidopropionase 1 TAS RGD PMID:8449931 RGD:634224 NCBI chr20:13,217,252...13,243,590
Ensembl chr20:13,217,258...13,243,590
JBrowse link
beta-alanine biosynthetic process via 3-ureidopropionate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Upb1 beta-ureidopropionase 1 involved_in ISO
IBA
ISS
(PMID:22525402), (PMID:29976570)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:22525402 PMID:29976570 GO_REF:0000024 GO_REF:0000033 NCBI chr20:13,217,252...13,243,590
Ensembl chr20:13,217,258...13,243,590
JBrowse link
bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd3 ATP binding cassette subfamily D member 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:25168382)
UniProt
RGD
PMID:25168382 GO_REF:0000024 NCBI chr 2:209,852,087...209,905,763
Ensembl chr 2:209,852,087...209,906,020
JBrowse link
G Acox2 acyl-CoA oxidase 2 involved_in ISO
IEA
ISS
(PMID:27884763)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:27884763 GO_REF:0000024 GO_REF:0000107 NCBI chr15:16,660,584...16,692,160
Ensembl chr15:16,660,272...16,692,160
JBrowse link
G Akr1d1 aldo-keto reductase family 1, member D1 involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:7508385)
GO_REF:0000107
GO_REF:0000002
RGD
Ensembl
InterPro
PMID:7508385 GO_REF:0000002 GO_REF:0000107 NCBI chr 4:66,154,246...66,187,505
Ensembl chr 4:66,154,248...66,186,372
JBrowse link
G Amacr alpha-methylacyl-CoA racemase involved_in IDA
IEA
GO_REF:0000041 UniProt
RGD
PMID:11964182 GO_REF:0000041, RGD:704372 NCBI chr 2:59,946,158...59,958,255
Ensembl chr 2:59,946,153...59,958,255
JBrowse link
G Baat bile acid CoA:amino acid N-acyltransferase involved_in ISO (PMID:12810727), (PMID:8034703) RGD PMID:8034703 PMID:12810727 NCBI chr 5:63,851,668...63,860,641
Ensembl chr 5:63,850,705...63,860,685
JBrowse link
G Cyp27a1 cytochrome P450, family 27, subfamily a, polypeptide 1 involved_in IEA
ISS
ISO
GO_REF:0000041
GO_REF:0000024
(PMID:11412116), (PMID:9660774)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:9660774 PMID:11412116 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 NCBI chr 9:76,264,655...76,294,551
Ensembl chr 9:76,264,860...76,294,551
JBrowse link
G Cyp39a1 cytochrome P450, family 39, subfamily a, polypeptide 1 involved_in ISO
IBA
(PMID:10748047)
GO_REF:0000033
RGD
GO_Central
PMID:10748047 GO_REF:0000033 NCBI chr 9:17,230,455...17,306,775
Ensembl chr 9:17,230,455...17,306,775
JBrowse link
G Cyp7a1 cytochrome P450 family 7 subfamily A member 1 involved_in TAS
IBA
IEA
IDA
ISO
GO_REF:0000033
GO_REF:0000041
PMID:1694852
(PMID:19965590)
GO_Central
UniProt
RGD
PMID:19965590 PMID:2335522 PMID:1694852 GO_REF:0000033 GO_REF:0000041, RGD:70535, RGD:70534 NCBI chr 5:19,376,979...19,386,676
Ensembl chr 5:19,376,974...19,386,688
JBrowse link
G Cyp7b1 cytochrome P450 family 7 subfamily B member 1 involved_in TAS
ISO
IBA
IEA
(PMID:10748047)
GO_REF:0000033
GO_REF:0000041
GO_REF:0000107
RGD
GO_Central
UniProt
Ensembl
PMID:10748047 PMID:12029625 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107, RGD:1298868 NCBI chr 2:100,502,791...100,669,713
Ensembl chr 2:100,502,791...100,669,698
JBrowse link
G Cyp8b1 cytochrome P450 family 8 subfamily B member 1 involved_in ISO (PMID:14643796)
(PMID:12393855)
RGD PMID:12393855 PMID:14643796 NCBI chr 8:121,578,123...121,580,093
Ensembl chr 8:121,557,062...121,580,166
JBrowse link
G Errfi1 ERBB receptor feedback inhibitor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3769404 (PMID:22912762)
Ensembl
RGD
PMID:22912762 GO_REF:0000107 NCBI chr 5:161,323,981...161,337,289
Ensembl chr 5:161,323,998...161,337,282
JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within ISO MGI:2384427 (PMID:11279518) RGD PMID:11279518 NCBI chr12:41,638,536...41,672,806
Ensembl chr12:41,645,587...41,672,104
JBrowse link
G Hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 involved_in ISO
IEA
ISS
(PMID:12917011)
GO_REF:0000107
GO_REF:0000024
GO_REF:0000041
RGD
Ensembl
UniProt
PMID:12917011 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 NCBI chr  X:21,089,142...21,091,603
Ensembl chr  X:21,089,122...21,109,488
JBrowse link
G Pex2 peroxisomal biogenesis factor 2 acts_upstream_of_or_within ISO MGI:2180128 (PMID:14673138) RGD PMID:14673138 NCBI chr 2:96,050,380...96,072,928
Ensembl chr 2:96,045,958...96,073,404
JBrowse link
G Slc27a2 solute carrier family 27 member 2 involved_in ISO
IEA
(PMID:11980911)
GO_REF:0000107
RGD
Ensembl
PMID:11980911 GO_REF:0000107 NCBI chr 3:113,804,728...113,842,208
Ensembl chr 3:113,804,728...113,842,208
JBrowse link
G Slc27a5 solute carrier family 27 member 5 involved_in ISO (PMID:11980911) RGD PMID:11980911 NCBI chr 1:73,616,556...73,627,149
Ensembl chr 1:73,616,564...73,627,172
JBrowse link
G Star steroidogenic acute regulatory protein IDA RGD PMID:15382124 RGD:1600081 NCBI chr16:66,267,094...66,274,368
Ensembl chr16:66,264,807...66,271,672
JBrowse link
branched-chain amino acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcat1 branched chain amino acid transaminase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:177,964,834...178,046,573
Ensembl chr 4:177,964,834...178,046,597
JBrowse link
G Bcat2 branched chain amino acid transaminase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:96,040,407...96,060,008
Ensembl chr 1:96,042,625...96,060,007
JBrowse link
carnosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carns1 carnosine synthase 1 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:20097752)
(PMID:20097752), (PMID:24891507)
GO_REF:0000033
RGD
GO_Central
PMID:20097752 PMID:24891507 GO_REF:0000033 NCBI chr 1:201,459,061...201,470,019
Ensembl chr 1:201,459,076...201,469,845
JBrowse link
citrulline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh18a1 aldehyde dehydrogenase 18 family, member A1 involved_in ISO (PMID:11092761), (PMID:26297558) RGD PMID:11092761 PMID:26297558 NCBI chr 1:239,375,657...239,407,956
Ensembl chr 1:239,375,669...239,407,890
JBrowse link
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase IDA RGD PMID:7053379 RGD:10755426 NCBI chr 6:25,292,133...25,315,078
Ensembl chr 6:25,292,133...25,319,861
JBrowse link
G Otc ornithine transcarbamylase involved_in IDA
IBA
ISO
GO_REF:0000033
(PMID:2556444), (PMID:8112735)
GO_Central
RGD
PMID:2556444 PMID:8112735 PMID:9472964 GO_REF:0000033, RGD:4144071 NCBI chr  X:12,453,834...12,529,954
Ensembl chr  X:12,453,834...12,566,918
JBrowse link
creatine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gamt guanidinoacetate N-methyltransferase acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
IEA
TAS
MGI:3044282 (PMID:15028668)
GO_REF:0000033
(PMID:8651275)
GO_REF:0000041
RGD
GO_Central
UniProt
PMID:8651275 PMID:15028668 PMID:15533043 PMID:12079381 GO_REF:0000033 GO_REF:0000041, RGD:1359081, RGD:632754 NCBI chr 7:9,448,590...9,451,413
Ensembl chr 7:9,448,628...9,451,778
JBrowse link
G Gatm glycine amidinotransferase acts_upstream_of_or_within
involved_in
ISO
IBA
IEA
(PMID:9218780)
GO_REF:0000033
GO_REF:0000041
RGD
GO_Central
UniProt
PMID:9218780 GO_REF:0000033 GO_REF:0000041 NCBI chr 3:109,658,919...109,675,508
Ensembl chr 3:109,658,951...109,684,129
JBrowse link
cyclooxygenase pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdkrb1 bradykinin receptor B1 involved_in ISO (PMID:23846981) RGD PMID:23846981 NCBI chr 6:124,510,827...124,514,475
Ensembl chr 6:124,510,870...124,513,747
JBrowse link
G Ptgs1 prostaglandin-endoperoxide synthase 1 involved_in IEA
IBA
ISO
GO_REF:0000107
GO_REF:0000033
(PMID:1380156)
Ensembl
GO_Central
RGD
PMID:1380156 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:19,584,015...19,605,589
Ensembl chr 3:19,584,015...19,605,586
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 involved_in
acts_upstream_of_or_within
ISS
ISO
IBA
GO_REF:0000024
(PMID:12925531)
(PMID:1419907)
GO_REF:0000033
(PMID:1380156), (PMID:7592599), (PMID:7947975)
UniProt
RGD
GO_Central
PMID:1380156 PMID:1419907 PMID:7592599 PMID:7947975 PMID:12925531 GO_REF:0000024 GO_REF:0000033 NCBI chr13:62,163,936...62,172,193
Ensembl chr13:62,163,932...62,172,188
JBrowse link
G Sco1 synthesis of cytochrome C oxidase 1 acts_upstream_of_or_within ISO MGI:2182095|MGI:5758867 (PMID:28973536) RGD PMID:28973536 NCBI chr10:51,744,656...51,757,246
Ensembl chr10:51,744,656...51,757,237
JBrowse link
G Sphk1 sphingosine kinase 1 IDA RGD PMID:18723875 RGD:2311353 NCBI chr10:101,758,567...101,764,240
Ensembl chr10:101,758,711...101,764,240
JBrowse link
cysteine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase involved_in
acts_upstream_of_or_within
ISO (PMID:24416422)
MGI:1857139 (PMID:15030387)
RGD PMID:15030387 PMID:24416422 NCBI chr20:9,708,089...9,732,623
Ensembl chr20:9,708,090...9,732,764
JBrowse link
G Cth cystathionine gamma-lyase involved_in IEA
ISS
ISO
GO_REF:0000041
GO_REF:0000024
(PMID:10212249)
UniProt
RGD
PMID:10212249 GO_REF:0000024 GO_REF:0000041 NCBI chr 2:246,975,888...247,002,234
Ensembl chr 2:246,975,894...247,002,234
JBrowse link
G Ggt1 gamma-glutamyltransferase 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:12468440)
Ensembl
RGD
PMID:12468440 GO_REF:0000107 NCBI chr20:13,074,695...13,104,095
Ensembl chr20:13,074,700...13,108,442
JBrowse link
cysteine biosynthetic process from serine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase involved_in IEA
IBA
GO_REF:0000104
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000104 NCBI chr20:9,708,089...9,732,623
Ensembl chr20:9,708,090...9,732,764
JBrowse link
cysteine biosynthetic process via cystathionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase involved_in IEA GO_REF:0000002
GO_REF:0000104
InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr20:9,708,089...9,732,623
Ensembl chr20:9,708,090...9,732,764
JBrowse link
G Cth cystathionine gamma-lyase involved_in ISO
IBA
IEA
(PMID:19428278)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:19428278 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:246,975,888...247,002,234
Ensembl chr 2:246,975,894...247,002,234
JBrowse link
D-serine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srr serine racemase involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:11054547), (PMID:15193426)
(PMID:10557334), (PMID:11054547), (PMID:12021263), (PMID:15710237)
GO_REF:0000033
RGD
GO_Central
PMID:10557334 PMID:11054547 PMID:12021263 PMID:15193426 PMID:15710237 GO_REF:0000033 NCBI chr10:59,769,563...59,786,688
Ensembl chr10:59,769,571...59,787,011
JBrowse link
dermatan sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst12 carbohydrate sulfotransferase 12 involved_in ISO (PMID:10781601) RGD PMID:10781601 NCBI chr12:14,110,631...14,129,099
Ensembl chr12:14,110,393...14,129,057
JBrowse link
G Chst14 carbohydrate sulfotransferase 14 acts_upstream_of_or_within ISO (PMID:11470797) RGD PMID:11470797 NCBI chr 3:105,916,481...105,918,538
Ensembl chr 3:105,916,466...105,918,548
JBrowse link
G Dse dermatan sulfate epimerase involved_in ISO (PMID:16505484) RGD PMID:16505484 NCBI chr20:26,118,194...26,196,889
Ensembl chr20:26,118,196...26,196,992
JBrowse link
G Ust uronyl-2-sulfotransferase involved_in ISO (PMID:10187838) RGD PMID:10187838 NCBI chr 1:2,666,983...2,962,276
Ensembl chr 1:2,669,592...2,962,044
JBrowse link
fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd3 ATP binding cassette subfamily D member 3 involved_in ISO
ISS
(PMID:25168382)
GO_REF:0000024
RGD
UniProt
PMID:25168382 GO_REF:0000024 NCBI chr 2:209,852,087...209,905,763
Ensembl chr 2:209,852,087...209,906,020
JBrowse link
G Acaca acetyl-CoA carboxylase alpha involved_in IDA
ISO
IBA
IEA
(PMID:20952656)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000043
RGD
GO_Central
Ensembl
UniProt
PMID:20952656 PMID:11735100 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107, RGD:2317316 NCBI chr10:69,014,261...69,276,453
Ensembl chr10:69,014,170...69,276,457
JBrowse link
G Acacb acetyl-CoA carboxylase beta involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:17210641)
GO_Central
RGD
PMID:17210641 GO_REF:0000033 NCBI chr12:42,365,800...42,477,651
Ensembl chr12:42,366,548...42,457,655
JBrowse link
G Acly ATP citrate lyase involved_in IDA
IBA
ISO
IEA
GO_REF:0000033
(PMID:10653665), (PMID:19286649)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:10653665 PMID:19286649 PMID:11735100 GO_REF:0000033 GO_REF:0000107, RGD:2317316 NCBI chr10:85,412,045...85,464,253
Ensembl chr10:85,412,049...85,463,320
JBrowse link
G Acsf3 acyl-CoA synthetase family member 3 involved_in ISO
IBA
(PMID:21846720)
GO_REF:0000033
RGD
GO_Central
PMID:21846720 GO_REF:0000033 NCBI chr19:50,835,116...50,875,557
Ensembl chr19:50,835,221...50,875,553
JBrowse link
G Acsl3 acyl-CoA synthetase long-chain family member 3 IDA RGD PMID:8663269 RGD:70280 NCBI chr 9:80,115,164...80,164,636
Ensembl chr 9:80,115,112...80,164,627
JBrowse link
G Acsm1 acyl-CoA synthetase medium-chain family member 1 acts_upstream_of_or_within ISO (PMID:11470804) RGD PMID:11470804 NCBI chr 1:173,985,715...174,020,565
Ensembl chr 1:173,984,672...174,025,495
JBrowse link
G Acsm2 acyl-CoA synthetase medium-chain family member 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:173,916,368...173,955,116
Ensembl chr 1:173,916,368...173,955,116
JBrowse link
G Acsm3 acyl-CoA synthetase medium-chain family member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
(PMID:11470804)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:11470804 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:174,133,260...174,159,966
Ensembl chr 1:174,133,288...174,160,184
JBrowse link
G Acsm4 acyl-CoA synthetase medium-chain family member 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:174,053,931...174,078,345
Ensembl chr 1:174,053,931...174,078,341
JBrowse link
G Acsm5 acyl-CoA synthetase medium-chain family member 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:173,870,873...173,896,838
Ensembl chr 1:173,863,041...173,898,588
JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304
JBrowse link
G Cbr4 carbonyl reductase 4 involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
GO_REF:0000041
UniProtKB:Q92506 (PMID:25203508)
UniProt
GO_Central
Ensembl
RGD
PMID:25203508 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107 NCBI chr16:28,629,928...28,684,230
Ensembl chr16:28,617,224...28,645,712
JBrowse link
G Degs1 delta(4)-desaturase, sphingolipid 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:93,946,154...93,953,677
Ensembl chr13:93,946,157...93,953,664
JBrowse link
G Degs1l2 delta(4)-desaturase, sphingolipid 1 like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:92,831,549...92,839,257
Ensembl chr13:92,831,537...92,839,246
JBrowse link
G Elovl2 ELOVL fatty acid elongase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:23,544,598...23,584,855
Ensembl chr17:23,544,568...23,584,848
JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:78,790,846...78,857,307
Ensembl chr 8:78,790,846...78,857,284
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:218,063,682...218,174,767
Ensembl chr 2:218,063,804...218,171,186
JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:39,789,229...39,858,579
Ensembl chr 2:39,789,250...39,856,845
JBrowse link
G ENSRNOG00000070521 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 4:62,878,905...62,880,265 JBrowse link
G Fa2h fatty acid 2-hydroxylase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:39,312,904...39,364,153
Ensembl chr19:39,312,906...39,364,153
JBrowse link
G Fads6 fatty acid desaturase 6 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:100,522,981...100,538,181
Ensembl chr10:100,522,981...100,538,181
JBrowse link
G Fasn fatty acid synthase acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
IEA
(PMID:22331133)
GO_REF:0000033
GO_REF:0000041
RGD
GO_Central
UniProt
PMID:22331133 PMID:15715522 GO_REF:0000033 GO_REF:0000041, RGD:2317317 NCBI chr10:106,072,093...106,090,259
Ensembl chr10:106,072,091...106,090,261
JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within ISO MGI:2384429 (PMID:10852923) RGD PMID:10852923 NCBI chr12:41,638,536...41,672,806
Ensembl chr12:41,645,587...41,672,104
JBrowse link
G Hsd17b8 hydroxysteroid (17-beta) dehydrogenase 8 involved_in ISO
IEA
ISS
UniProtKB:Q8N4T8 (PMID:25203508)
GO_REF:0000043
GO_REF:0000107
GO_REF:0000041
GO_REF:0000024
RGD
UniProt
Ensembl
PMID:25203508 GO_REF:0000024 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chr20:4,826,725...4,828,742
Ensembl chr20:4,822,026...4,828,742
JBrowse link
G Lipc lipase C, hepatic type involved_in ISO
IBA
IEA
(PMID:182536)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:182536 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:71,509,633...71,635,663
Ensembl chr 8:71,509,635...71,635,464
JBrowse link
G Lipg lipase G, endothelial type involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:68,514,923...68,536,105
Ensembl chr18:68,514,923...68,536,260
JBrowse link
G Lpl lipoprotein lipase involved_in ISO
IBA
IEA
(PMID:182536)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:182536 GO_REF:0000033 GO_REF:0000107 NCBI chr16:20,830,055...20,853,855
Ensembl chr16:20,829,465...20,855,249
JBrowse link
G Mcat malonyl-CoA-acyl carrier protein transacylase involved_in ISO
IBA
IEA
(PMID:12882974)
GO_REF:0000033
GO_REF:0000041
RGD
GO_Central
UniProt
PMID:12882974 GO_REF:0000033 GO_REF:0000041 NCBI chr 7:114,693,612...114,705,677
Ensembl chr 7:114,693,612...114,704,542
JBrowse link
G Mecr mitochondrial trans-2-enoyl-CoA reductase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:144,029,684...144,056,373
Ensembl chr 5:144,029,731...144,055,863
JBrowse link
G Mgll monoglyceride lipase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:121,192,186...121,294,187
Ensembl chr 4:121,192,195...121,294,179
JBrowse link
G Mlycd malonyl-CoA decarboxylase involved_in IMP
IBA
ISO
PMID:15105298
GO_REF:0000033
(PMID:15003260)
GO_Central
RGD
PMID:15003260 PMID:15105298 GO_REF:0000033, RGD:1600796 NCBI chr19:47,447,931...47,463,794
Ensembl chr19:47,447,970...47,463,793
JBrowse link
G Ndufab1 NADH:ubiquinone oxidoreductase subunit AB1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:176,644,696...176,658,131
Ensembl chr 1:176,644,703...176,658,099
JBrowse link
G Oxsm 3-oxoacyl-ACP synthase, mitochondrial involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:9,210,443...9,215,852
Ensembl chr15:9,210,547...9,214,558
JBrowse link
G Pecr peroxisomal trans-2-enoyl-CoA reductase involved_in IEA GO_REF:0000041
GO_REF:0000043
UniProt GO_REF:0000041 GO_REF:0000043 NCBI chr 9:73,897,877...73,926,511
Ensembl chr 9:73,897,880...73,926,511
JBrowse link
G Pla2g1b phospholipase A2 group IB involved_in ISO
IEA
IDA
(PMID:1918029)
GO_REF:0000107
RGD
Ensembl
PMID:1918029 PMID:1918029 GO_REF:0000107, RGD:8553780 NCBI chr12:41,142,193...41,151,967
Ensembl chr12:41,142,200...41,153,226
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543
JBrowse link
G Prkab1 protein kinase AMP-activated non-catalytic subunit beta 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:40,588,140...40,598,673
Ensembl chr12:40,588,211...40,598,661
JBrowse link
G Prkab2 protein kinase AMP-activated non-catalytic subunit beta 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:185,257,218...185,272,846
Ensembl chr 2:185,257,213...185,269,872
JBrowse link
G Prkag1 protein kinase AMP-activated non-catalytic subunit gamma 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:129,963,105...129,980,532
Ensembl chr 7:129,963,105...129,980,561
JBrowse link
G Prkag2 protein kinase AMP-activated non-catalytic subunit gamma 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:10,010,890...10,252,155
Ensembl chr 4:10,010,890...10,252,142
JBrowse link
G Prkag3 protein kinase AMP-activated non-catalytic subunit gamma 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:76,295,715...76,304,959
Ensembl chr 9:76,295,715...76,304,959
JBrowse link
G Scd stearoyl-CoA desaturase acts_upstream_of_or_within TAS
ISO
MGI:2388371 (PMID:12815040) RGD PMID:12815040 PMID:12896875 RGD:1304415 NCBI chr 1:243,269,745...243,282,878
Ensembl chr 1:243,269,747...243,282,562
JBrowse link
G Scd2 stearoyl-Coenzyme A desaturase 2 TAS RGD PMID:16207839 RGD:1580018 NCBI chr 1:243,169,171...243,182,231
Ensembl chr 1:243,169,236...243,182,232
JBrowse link
G Scd4 stearoyl-coenzyme A desaturase 4 acts_upstream_of_or_within ISO (PMID:12815040) RGD PMID:12815040 NCBI chr 1:243,203,433...243,216,007
Ensembl chr 1:243,203,881...243,215,148
JBrowse link
G Tecr trans-2,3-enoyl-CoA reductase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:24,526,700...24,568,168
Ensembl chr19:24,541,615...24,568,168
JBrowse link
fatty acid elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:26108493)
UniProt
RGD
PMID:26108493 GO_REF:0000024 NCBI chr  X:151,428,334...151,450,115
Ensembl chr  X:151,428,578...151,450,115
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 acts_upstream_of_or_within ISO (PMID:11567032) RGD PMID:11567032 NCBI chr 2:218,063,682...218,174,767
Ensembl chr 2:218,063,804...218,171,186
JBrowse link
G Hacd1 3-hydroxyacyl-CoA dehydratase 1 involved_in ISO
IBA
(PMID:18554506)
GO_REF:0000033
RGD
GO_Central
PMID:18554506 GO_REF:0000033 NCBI chr17:77,081,508...77,106,114
Ensembl chr17:77,083,740...77,106,073
JBrowse link
G Hacd2 3-hydroxyacyl-CoA dehydratase 2 involved_in ISO
IBA
(PMID:18554506)
GO_REF:0000033
RGD
GO_Central
PMID:18554506 GO_REF:0000033 NCBI chr11:65,667,671...65,762,903
Ensembl chr11:65,670,281...65,762,889
JBrowse link
G Hacd3 3-hydroxyacyl-CoA dehydratase 3 involved_in ISO
IBA
(PMID:18554506)
GO_REF:0000033
RGD
GO_Central
PMID:18554506 GO_REF:0000033 NCBI chr 8:65,501,240...65,538,507
Ensembl chr 8:65,501,240...65,538,507
JBrowse link
G Hacd4 3-hydroxyacyl-CoA dehydratase 4 involved_in ISO
IBA
(PMID:18554506)
GO_REF:0000033
RGD
GO_Central
PMID:18554506 GO_REF:0000033 NCBI chr 5:102,887,597...102,915,376
Ensembl chr 5:102,887,588...102,915,338
JBrowse link
G Tecr trans-2,3-enoyl-CoA reductase involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:12482854)
UniProt
Ensembl
RGD
PMID:12482854 GO_REF:0000024 GO_REF:0000107 NCBI chr19:24,526,700...24,568,168
Ensembl chr19:24,541,615...24,568,168
JBrowse link
fatty acid elongation, monounsaturated fatty acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elovl1 ELOVL fatty acid elongase 1 involved_in ISO
IBA
(PMID:20166112)
GO_REF:0000033
RGD
GO_Central
PMID:20166112 GO_REF:0000033 NCBI chr 5:131,961,478...131,965,961
Ensembl chr 5:131,961,322...131,965,958
JBrowse link
G Elovl2 ELOVL fatty acid elongase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:23,544,598...23,584,855
Ensembl chr17:23,544,568...23,584,848
JBrowse link
G Elovl3 ELOVL fatty acid elongase 3 involved_in ISO
IBA
(PMID:20937905)
(PMID:14581464)
GO_REF:0000033
RGD
GO_Central
PMID:14581464 PMID:20937905 GO_REF:0000033 NCBI chr 1:244,997,287...245,001,115
Ensembl chr 1:244,997,287...245,001,115
JBrowse link
G Elovl4 ELOVL fatty acid elongase 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:84,702,916...84,729,466
Ensembl chr 8:84,702,362...84,729,697
JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000104
(PMID:20427700)
UniProt
GO_Central
RGD
PMID:20427700 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 NCBI chr 8:78,790,846...78,857,307
Ensembl chr 8:78,790,846...78,857,284
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in IDA
IBA
PMID:12005057
GO_REF:0000033
GO_Central PMID:12005057 GO_REF:0000033, RGD:8554529 NCBI chr 2:218,063,682...218,174,767
Ensembl chr 2:218,063,804...218,171,186
JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:39,789,229...39,858,579
Ensembl chr 2:39,789,250...39,856,845
JBrowse link
fatty acid elongation, polyunsaturated fatty acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elovl1 ELOVL fatty acid elongase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:131,961,478...131,965,961
Ensembl chr 5:131,961,322...131,965,958
JBrowse link
G Elovl2 ELOVL fatty acid elongase 2 involved_in ISO
IBA
IEA
(PMID:12371743), (PMID:20937905)
GO_REF:0000033
(PMID:12371743), (PMID:21106902)
GO_REF:0000104
RGD
GO_Central
UniProt
PMID:12371743 PMID:20937905 PMID:21106902 GO_REF:0000033 GO_REF:0000104 NCBI chr17:23,544,598...23,584,855
Ensembl chr17:23,544,568...23,584,848
JBrowse link
G Elovl3 ELOVL fatty acid elongase 3 involved_in ISO
IBA
(PMID:20937905)
GO_REF:0000033
RGD
GO_Central
PMID:20937905 GO_REF:0000033 NCBI chr 1:244,997,287...245,001,115
Ensembl chr 1:244,997,287...245,001,115
JBrowse link
G Elovl4 ELOVL fatty acid elongase 4 involved_in ISO
IBA
(PMID:23479632)
GO_REF:0000033
RGD
GO_Central
PMID:23479632 GO_REF:0000033 NCBI chr 8:84,702,916...84,729,466
Ensembl chr 8:84,702,362...84,729,697
JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 involved_in IDA
IBA
IEA
ISO
PMID:12005057
GO_REF:0000033
GO_REF:0000104
(PMID:20427700), (PMID:20937905)
GO_Central
UniProt
RGD
PMID:20427700 PMID:20937905 PMID:12005057 GO_REF:0000033 GO_REF:0000104, RGD:8554529 NCBI chr 8:78,790,846...78,857,307
Ensembl chr 8:78,790,846...78,857,284
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:218,063,682...218,174,767
Ensembl chr 2:218,063,804...218,171,186
JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 involved_in IEA
IBA
ISO
GO_REF:0000107
GO_REF:0000033
(PMID:20937905)
Ensembl
GO_Central
RGD
PMID:20937905 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:39,789,229...39,858,579
Ensembl chr 2:39,789,250...39,856,845
JBrowse link
fatty acid elongation, saturated fatty acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elovl1 ELOVL fatty acid elongase 1 involved_in ISO
IBA
(PMID:20166112), (PMID:20937905)
GO_REF:0000033
RGD
GO_Central
PMID:20166112 PMID:20937905 GO_REF:0000033 NCBI chr 5:131,961,478...131,965,961
Ensembl chr 5:131,961,322...131,965,958
JBrowse link
G Elovl2 ELOVL fatty acid elongase 2 involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr17:23,544,598...23,584,855
Ensembl chr17:23,544,568...23,584,848
JBrowse link
G Elovl3 ELOVL fatty acid elongase 3 involved_in ISO
IBA
(PMID:20937905)
(PMID:14581464)
GO_REF:0000033
RGD
GO_Central
PMID:14581464 PMID:20937905 GO_REF:0000033 NCBI chr 1:244,997,287...245,001,115
Ensembl chr 1:244,997,287...245,001,115
JBrowse link
G Elovl4 ELOVL fatty acid elongase 4 involved_in ISO
IBA
(PMID:20937905)
GO_REF:0000033
RGD
GO_Central
PMID:20937905 GO_REF:0000033 NCBI chr 8:84,702,916...84,729,466
Ensembl chr 8:84,702,362...84,729,697
JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr 8:78,790,846...78,857,307
Ensembl chr 8:78,790,846...78,857,284
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in ISO
IBA
IDA
UniProtKB:Q9VV87 (PMID:20937905), (PMID:26214738)
GO_REF:0000033
PMID:12005057
RGD
GO_Central
PMID:20937905 PMID:26214738 PMID:12005057 GO_REF:0000033, RGD:8554529 NCBI chr 2:218,063,682...218,174,767
Ensembl chr 2:218,063,804...218,171,186
JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 involved_in ISO
IBA
IEA
(PMID:19826053)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:19826053 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:39,789,229...39,858,579
Ensembl chr 2:39,789,250...39,856,845
JBrowse link
G Hsd17b12 hydroxysteroid (17-beta) dehydrogenase 12 involved_in ISO (PMID:25003994) RGD PMID:25003994 NCBI chr 3:79,990,048...80,113,556
Ensembl chr 3:79,990,056...80,113,617
JBrowse link
gamma-aminobutyric acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase IMP RGD PMID:19540876 RGD:9588538 NCBI chr10:6,996,688...7,092,835
Ensembl chr10:6,999,819...7,092,835
JBrowse link
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:26430123)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:26430123 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:218,000,470...218,152,962
Ensembl chr 1:218,042,127...218,152,961
JBrowse link
G Gad1 glutamate decarboxylase 1 involved_in IDA
ISO
IBA
IEA
(PMID:9177246)
GO_REF:0000033
(PMID:17384644)
GO_REF:0000107
PMID:1924335
RGD
GO_Central
Ensembl
PMID:9177246 PMID:17384644 PMID:17712632 PMID:1924335 GO_REF:0000033 GO_REF:0000107, RGD:6480258, RGD:728511 NCBI chr 3:55,369,704...55,410,335
Ensembl chr 3:55,369,704...55,410,333
JBrowse link
G Gad2 glutamate decarboxylase 2 involved_in IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:22108820 GO_REF:0000033, RGD:401900601 NCBI chr17:84,763,630...84,826,155
Ensembl chr17:84,763,628...84,826,155
JBrowse link
G Slc1a3 solute carrier family 1 member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1931872 (PMID:15305132)
Ensembl
RGD
PMID:15305132 GO_REF:0000107 NCBI chr 2:57,755,495...57,830,605
Ensembl chr 2:57,755,497...57,830,605
JBrowse link
G Slc38a1 solute carrier family 38, member 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:32668809)
UniProt
RGD
PMID:32668809 GO_REF:0000024 NCBI chr 7:127,733,230...127,802,541
Ensembl chr 7:127,738,226...127,802,218
JBrowse link
glutamate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gls glutaminase involved_in IEA
ISO
IBA
ISS
GO_REF:0000107
(PMID:22228304)
GO_REF:0000033
GO_REF:0000024
(PMID:16899818), (PMID:22049910)
Ensembl
RGD
GO_Central
UniProt
PMID:16899818 PMID:22049910 PMID:22228304 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:49,344,616...49,416,900
Ensembl chr 9:49,344,781...49,416,900
JBrowse link
G Gls2 glutaminase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:617,252...633,424
Ensembl chr 7:617,288...633,426
JBrowse link
G Glud1 glutamate dehydrogenase 1 involved_in ISO (PMID:11032875) RGD PMID:11032875 NCBI chr16:9,640,312...9,673,961
Ensembl chr16:9,640,312...9,673,957
JBrowse link
G Slc25a12 solute carrier family 25 member 12 IMP RGD PMID:19764902 RGD:13628741 NCBI chr 3:56,097,166...56,191,841
Ensembl chr 3:56,097,269...56,192,100
JBrowse link
glutamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glul glutamate-ammonia ligase involved_in IDA
IBA
IEA
GO_REF:0000033
GO_REF:0000002
GO_Central
InterPro
RGD
PMID:4403443 PMID:28323 GO_REF:0000002 GO_REF:0000033, RGD:2301548, RGD:2301547 NCBI chr13:65,969,053...66,035,121
Ensembl chr13:66,025,630...66,035,108
JBrowse link
G Lgsn lengsin, lens protein with glutamine synthetase domain involved_in
NOT|involved_in
IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr 9:33,416,362...33,447,919
Ensembl chr 9:33,420,484...33,447,907
JBrowse link
glycine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hao1 hydroxyacid oxidase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:121,757,400...121,828,721
Ensembl chr 3:121,771,836...121,828,721
JBrowse link
G Sardh sarcosine dehydrogenase TAS RGD PMID:9839943 RGD:634034 NCBI chr 3:10,510,553...10,575,342
Ensembl chr 3:10,510,553...10,573,874
JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 IDA from L-allothreonine in the absence of tetrahydrofolate RGD PMID:3110140 RGD:2300383 NCBI chr10:45,468,698...45,490,833
Ensembl chr10:45,468,700...45,497,820
JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 IDA from L-allothreonine in the absence of tetrahydrofolate RGD PMID:3110140 RGD:2300383 NCBI chr 7:63,358,961...63,364,293
Ensembl chr 7:63,358,961...63,364,236
JBrowse link
G Tha1 threonine aldolase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:103,094,681...103,100,169
Ensembl chr10:103,094,681...103,100,519
JBrowse link
glycine biosynthetic process from serine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shmt1 serine hydroxymethyltransferase 1 involved_in IDA
IBA
in the presence of tetrahydrofolate
GO_REF:0000033
GO_Central
RGD
PMID:3110140 GO_REF:0000033, RGD:2300383 NCBI chr10:45,468,698...45,490,833
Ensembl chr10:45,468,700...45,497,820
JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 involved_in IDA
IBA
in the presence of tetrahydrofolate
GO_REF:0000033
GO_Central
RGD
PMID:3110140 GO_REF:0000033, RGD:2300383 NCBI chr 7:63,358,961...63,364,293
Ensembl chr 7:63,358,961...63,364,236
JBrowse link
glycine biosynthetic process, by transamination of glyoxylate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate aminotransferase involved_in IDA
IBA
ISO
GO_REF:0000033
(PMID:22198249)
GO_Central
RGD
PMID:22198249 PMID:12383475 GO_REF:0000033, RGD:1599457 NCBI chr 9:93,675,384...93,685,337
Ensembl chr 9:93,675,384...93,685,336
JBrowse link
G Agxt2 alanine-glyoxylate aminotransferase 2 involved_in ISO (PMID:20018850) RGD PMID:20018850 NCBI chr 2:59,336,252...59,377,664
Ensembl chr 2:59,336,283...59,377,926
JBrowse link
glycolate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Park7 Parkinsonism associated deglycase involved_in ISO
IBA
ISS
(PMID:22523093)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
ParkinsonsUK-UCL
PMID:22523093 GO_REF:0000024 GO_REF:0000033 NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970
JBrowse link
hepoxilin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox12 arachidonate 12-lipoxygenase, 12S type involved_in IDA PMID:23382512 UniProt PMID:23382512 RGD:8554649 NCBI chr10:54,958,263...54,970,542
Ensembl chr10:54,958,271...54,970,542
JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type involved_in IDA
IBA
PMID:23382512
GO_REF:0000033
GO_Central PMID:23382512 GO_REF:0000033, RGD:8554649 NCBI chr10:53,863,060...53,874,938
Ensembl chr10:53,863,060...53,874,938
JBrowse link
G Alox15 arachidonate 15-lipoxygenase involved_in IDA PMID:23382512 RGD
UniProt
PMID:15123652 PMID:23382512 RGD:5509794, RGD:8554649 NCBI chr10:55,060,169...55,068,885
Ensembl chr10:55,060,412...55,068,874
JBrowse link
G Alox15b arachidonate 15-lipoxygenase, type B involved_in IDA
IBA
PMID:23382512
GO_REF:0000033
GO_Central PMID:23382512 GO_REF:0000033, RGD:8554649 NCBI chr10:53,892,496...53,901,812
Ensembl chr10:53,892,466...53,901,812
JBrowse link
G Aloxe3 arachidonate epidermal lipoxygenase 3 involved_in ISO
IBA
IDA
(PMID:12881489), (PMID:17045234)
(PMID:17045234), (PMID:22832496)
GO_REF:0000033
PMID:23382512
RGD
GO_Central
PMID:12881489 PMID:17045234 PMID:22832496 PMID:23382512 GO_REF:0000033, RGD:8554649 NCBI chr10:53,830,219...53,854,328
Ensembl chr10:53,831,264...53,854,328
JBrowse link
G Gstm1 glutathione S-transferase mu 1 involved_in ISO
ISS
(PMID:21046276)
GO_REF:0000024
RGD
UniProt
PMID:21046276 GO_REF:0000024 NCBI chr 2:195,649,845...195,655,402
Ensembl chr 2:195,649,845...195,655,411
JBrowse link
G Gstm2 glutathione S-transferase mu 2 involved_in ISO
ISS
(PMID:21046276)
GO_REF:0000024
RGD
UniProt
PMID:21046276 GO_REF:0000024 NCBI chr 2:195,624,015...195,628,774
Ensembl chr 2:195,544,426...195,628,961
JBrowse link
G Gstm7 glutathione S-transferase, mu 7 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:195,566,701...195,572,149
Ensembl chr 2:195,566,701...195,572,203
JBrowse link
G Gstp1 glutathione S-transferase pi 1 involved_in ISO
ISS
(PMID:21046276)
GO_REF:0000024
RGD
UniProt
PMID:21046276 GO_REF:0000024 NCBI chr 1:201,337,762...201,340,230
Ensembl chr 1:201,321,672...201,340,226
JBrowse link
hydroxylysine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plod2 procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 involved_in ISO
IEA
(PMID:10934207)
GO_REF:0000107
RGD
Ensembl
PMID:10934207 GO_REF:0000107 NCBI chr 8:93,084,548...93,167,255
Ensembl chr 8:93,084,513...93,167,255
JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:16447251)
Ensembl
RGD
PMID:16447251 GO_REF:0000107 NCBI chr12:19,676,384...19,686,945
Ensembl chr12:19,676,386...19,686,960
JBrowse link
icosanoid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox15 arachidonate 15-lipoxygenase involved_in NAS PMID:15123652 UniProt PMID:15123652 RGD:5509794 NCBI chr10:55,060,169...55,068,885
Ensembl chr10:55,060,412...55,068,874
JBrowse link
G Cyp2c11 cytochrome P450, subfamily 2, polypeptide 11 involved_in IDA PMID:15766564 UniProt PMID:15766564 RGD:14402444 NCBI chr 1:236,762,719...236,799,069
Ensembl chr 1:236,762,842...236,799,066
JBrowse link
G Cyp2c23 cytochrome P450, family 2, subfamily c, polypeptide 23 involved_in IDA PMID:15766564 UniProt PMID:15766564 RGD:14402444 NCBI chr 1:242,889,218...242,913,869
Ensembl chr 1:242,889,224...242,913,858
JBrowse link
G Cyp2c79 cytochrome P450, family 2, subfamily c, polypeptide 79 involved_in ISO (PMID:15766564) RGD PMID:15766564
G Cyp4a1 cytochrome P450, family 4, subfamily a, polypeptide 1 involved_in IMP
IBA
GO_REF:0000033 GO_Central
RGD
PMID:12857783 GO_REF:0000033, RGD:1625451 NCBI chr 5:129,123,323...129,137,464
Ensembl chr 5:129,123,336...129,137,464
JBrowse link
G Cyp4a2 cytochrome P450, family 4, subfamily a, polypeptide 2 involved_in IMP
IBA
GO_REF:0000033 GO_Central
RGD
PMID:12857783 GO_REF:0000033, RGD:1625451 NCBI chr 5:128,922,355...128,934,188
Ensembl chr 5:128,923,615...128,934,165
JBrowse link
G Cyp4a2l1 cytochrome P450, family 4, subfamily a, polypeptide 2 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:129,010,501...129,021,087
Ensembl chr 5:128,923,615...129,026,477
JBrowse link
G Cyp4a3 cytochrome P450, family 4, subfamily a, polypeptide 3 involved_in IMP
IBA
GO_REF:0000033 GO_Central
RGD
PMID:12857783 GO_REF:0000033, RGD:1625451 NCBI chr 5:129,097,571...129,115,488
Ensembl chr 5:129,097,926...129,115,463
JBrowse link
G Cyp4a8 cytochrome P450, family 4, subfamily a, polypeptide 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:128,702,130...128,733,476
Ensembl chr 5:128,702,131...128,733,476
JBrowse link
G Pla2g4a phospholipase A2 group 4A acts_upstream_of_or_within ISO (PMID:17293613) RGD PMID:17293613 NCBI chr13:61,877,818...62,022,261
Ensembl chr13:61,877,813...62,022,266
JBrowse link
isoleucine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ilvbl ilvB acetolactate synthase like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:11,039,870...11,049,924
Ensembl chr 7:11,039,871...11,049,924
JBrowse link
G Sds serine dehydratase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:36,083,226...36,090,540
Ensembl chr12:36,083,229...36,088,203
JBrowse link
G Sdsl serine dehydratase-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:36,099,693...36,109,914
Ensembl chr12:36,099,693...36,109,906
JBrowse link
kynurenic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ido1 indoleamine 2,3-dioxygenase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3505776 (PMID:19234212)
Ensembl
RGD
PMID:19234212 GO_REF:0000107 NCBI chr16:67,430,654...67,442,726
Ensembl chr16:67,430,578...67,442,730
JBrowse link
G Kmo kynurenine 3-monooxygenase IMP RGD PMID:15829251 RGD:13513901 NCBI chr13:87,557,080...87,589,334
Ensembl chr13:87,557,286...87,588,881
JBrowse link
L-arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase involved_in NAS
IEA
ISO
ISS
GO_REF:0000041
(PMID:22081021)
(PMID:11747432), (PMID:11747433)
GO_REF:0000024
UniProt
RGD
PMID:11747432 PMID:11747433 PMID:22081021 PMID:2789519 GO_REF:0000024 GO_REF:0000041, RGD:632221 NCBI chr12:26,659,664...26,677,136
Ensembl chr12:26,659,565...26,679,662
JBrowse link
G Ass1 argininosuccinate synthase 1 involved_in IDA
IBA
IMP
ISO
IEA
GO_REF:0000033
PMID:19491403
(PMID:18473344), (PMID:27287393), (PMID:8792870)
GO_REF:0000041
GO_Central
RGD
UniProt
PMID:8792870 PMID:18473344 PMID:27287393 PMID:12470967 PMID:19491403 GO_REF:0000033 GO_REF:0000041, RGD:631755, RGD:12859071 NCBI chr 3:14,747,355...14,796,909
Ensembl chr 3:14,747,368...14,796,903
JBrowse link
G Nags N-acetylglutamate synthase involved_in IEA
IBA
GO_REF:0000041
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000041 NCBI chr10:87,098,330...87,102,465
Ensembl chr10:87,098,330...87,102,465
JBrowse link
G Otc ornithine transcarbamylase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:12,453,834...12,529,954
Ensembl chr  X:12,453,834...12,566,918
JBrowse link
L-ascorbic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1a1 aldo-keto reductase family 1 member A1 involved_in
acts_upstream_of_or_within
IMP
ISO
PMID:22820017
(PMID:15769935)
MGI:4239556 (PMID:20410296)
RGD PMID:15769935 PMID:20410296 PMID:22820017 RGD:13825440 NCBI chr 5:130,092,945...130,130,277
Ensembl chr 5:130,092,732...130,113,674
JBrowse link
G Akr1b1 aldo-keto reductase family 1 member B1 involved_in ISO MGI:5008171 (PMID:20410296) RGD PMID:20410296 NCBI chr 4:62,932,033...62,946,126
Ensembl chr 4:62,932,031...62,946,157
JBrowse link
G Gsto1 glutathione S-transferase omega 1 IMP RGD PMID:9786866 RGD:70644 NCBI chr 1:246,721,089...246,731,228
Ensembl chr 1:246,721,221...246,731,468
JBrowse link
G Gulo gulonolactone (L-) oxidase involved_in ISS
IEA
GO_REF:0000024
GO_REF:0000107
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr15:40,205,677...40,227,766
Ensembl chr15:40,205,665...40,227,874
JBrowse link
G Rgn regucalcin involved_in ISS
ISO
IBA
GO_REF:0000024
MGI:2670511 (PMID:16585534), (PMID:23349732)
GO_REF:0000033
UniProt
RGD
GO_Central
PMID:16585534 PMID:23349732 GO_REF:0000024 GO_REF:0000033 NCBI chr  X:1,619,030...1,634,456
Ensembl chr  X:1,619,032...1,634,450
JBrowse link
L-asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asns asparagine synthetase (glutamine-hydrolyzing) involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:35,784,995...35,803,474
Ensembl chr 4:35,785,237...35,803,423
JBrowse link
L-glutamate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 IDA RGD PMID:16489927 RGD:13504861 NCBI chr 1:242,357,293...242,381,535
Ensembl chr 1:242,357,306...242,380,633
JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 IDA RGD PMID:16489927 RGD:13504861 NCBI chr19:9,174,304...9,199,995
Ensembl chr19:9,174,311...9,199,994
JBrowse link
L-histidine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:94,977,862...95,045,375
Ensembl chr 6:94,977,862...95,045,372
JBrowse link
G Mthfd2l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:17,089,947...17,170,036
Ensembl chr14:17,089,952...17,170,112
JBrowse link
L-leucine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcat1 branched chain amino acid transaminase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:177,964,834...178,046,573
Ensembl chr 4:177,964,834...178,046,597
JBrowse link
G Bcat2 branched chain amino acid transaminase 2 involved_in IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:11733007 GO_REF:0000033, RGD:1582175 NCBI chr 1:96,040,407...96,060,008
Ensembl chr 1:96,042,625...96,060,007
JBrowse link
L-methionine salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhmt betaine-homocysteine S-methyltransferase involved_in ISO
IBA
IEA
(PMID:18230605)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:18230605 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:24,859,871...24,879,449
Ensembl chr 2:24,859,873...24,879,742
JBrowse link
G Bhmt2 betaine-homocysteine S-methyltransferase 2 involved_in IEA
IBA
ISO
GO_REF:0000107
GO_REF:0000033
(PMID:18230605)
Ensembl
GO_Central
RGD
PMID:18230605 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:24,895,525...24,912,475
Ensembl chr 2:24,895,533...24,912,475
JBrowse link
L-methionine salvage from methylthioadenosine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adi1 acireductone dioxygenase 1 involved_in IEA
ISS
ISO
GO_REF:0000041
GO_REF:0000024
(PMID:15938715)
UniProt
RGD
PMID:15938715 GO_REF:0000024 GO_REF:0000041 NCBI chr 6:45,306,885...45,313,847
Ensembl chr 6:45,306,841...45,313,842
JBrowse link
G Apip APAF1 interacting protein involved_in IEA
IBA
ISO
GO_REF:0000041
GO_REF:0000033
(PMID:22837397), (PMID:23285211)
UniProt
GO_Central
RGD
PMID:22837397 PMID:23285211 GO_REF:0000033 GO_REF:0000041 NCBI chr 3:89,431,964...89,458,000
Ensembl chr 3:89,432,037...89,458,340
JBrowse link
G Enoph1 enolase-phosphatase 1 involved_in IEA
IBA
ISO
ISS
GO_REF:0000041
GO_REF:0000033
(PMID:15843022)
GO_REF:0000024
UniProt
GO_Central
RGD
PMID:15843022 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 NCBI chr14:9,531,336...9,557,797
Ensembl chr14:9,531,339...9,569,273
JBrowse link
G Mri1 methylthioribose-1-phosphate isomerase 1 involved_in IEA
IBA
GO_REF:0000041
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000041 NCBI chr19:23,907,327...23,913,721
Ensembl chr19:23,907,335...23,913,320
JBrowse link
G Mtap methylthioadenosine phosphorylase involved_in IEA
IBA
GO_REF:0000041
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000041 NCBI chr 5:103,874,460...103,920,684
Ensembl chr 5:103,873,020...103,939,406
JBrowse link
L-proline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh18a1 aldehyde dehydrogenase 18 family, member A1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:239,375,657...239,407,956
Ensembl chr 1:239,375,669...239,407,890
JBrowse link
G Eef1d eukaryotic translation elongation factor 1 delta involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:107,581,930...107,596,735
Ensembl chr 7:107,581,930...107,608,799
JBrowse link
G Noxred1 NADP-dependent oxidoreductase domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:106,862,350...106,888,113
Ensembl chr 6:106,862,343...106,884,712
JBrowse link
G Oat ornithine aminotransferase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:187,347,862...187,367,644
Ensembl chr 1:187,347,865...187,367,682
JBrowse link
G Pycr1 pyrroline-5-carboxylate reductase 1 involved_in IEA
IBA
GO_REF:0000041
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000041 NCBI chr10:105,917,732...105,922,658
Ensembl chr10:105,917,680...105,922,549
JBrowse link
G Pycr2 pyrroline-5-carboxylate reductase 2 involved_in IEA
IBA
GO_REF:0000041
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000041 NCBI chr13:92,626,462...92,630,256
Ensembl chr13:92,626,471...92,634,184
JBrowse link
G Pycr3 pyrroline-5-carboxylate reductase 3 involved_in IEA
IBA
ISS
ISO
GO_REF:0000041
GO_REF:0000033
GO_REF:0000024
(PMID:23024808)
UniProt
GO_Central
RGD
PMID:23024808 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 NCBI chr 7:107,603,543...107,608,831
Ensembl chr 7:107,581,930...107,608,799
JBrowse link
L-serine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07011698.1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 2:153,941,154...153,942,719 JBrowse link
G Phgdh phosphoglycerate dehydrogenase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:185,906,962...185,936,054
Ensembl chr 2:185,906,966...185,935,944
JBrowse link
G Psat1 phosphoserine aminotransferase 1 involved_in ISO
IBA
(PMID:37627284)
GO_REF:0000033
RGD
GO_Central
PMID:37627284 GO_REF:0000033 NCBI chr 1:213,196,709...213,218,564
Ensembl chr 1:213,196,709...213,218,682
JBrowse link
G Psph phosphoserine phosphatase involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:14673469)
UniProt
GO_Central
RGD
PMID:14673469 GO_REF:0000024 GO_REF:0000033 NCBI chr12:26,882,524...26,905,084
Ensembl chr12:26,883,133...26,905,074
JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 IDA RGD PMID:10457370 RGD:2300380 NCBI chr 7:63,358,961...63,364,293
Ensembl chr 7:63,358,961...63,364,236
JBrowse link
L-valine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcat1 branched chain amino acid transaminase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:177,964,834...178,046,573
Ensembl chr 4:177,964,834...178,046,597
JBrowse link
G Bcat2 branched chain amino acid transaminase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:96,040,407...96,060,008
Ensembl chr 1:96,042,625...96,060,007
JBrowse link
G Ilvbl ilvB acetolactate synthase like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:11,039,870...11,049,924
Ensembl chr 7:11,039,871...11,049,924
JBrowse link
lactate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gatd1 glutamine amidotransferase class 1 domain containing 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:196,504,533...196,512,561
Ensembl chr 1:196,504,833...196,512,551
JBrowse link
G Ins2 insulin 2 involved_in ISO (PMID:8069456) RGD PMID:8069456 NCBI chr 1:197,843,277...197,992,522
Ensembl chr 1:197,843,281...197,864,775
JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO (PMID:22523093) RGD PMID:22523093 NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970
JBrowse link
G Per2 period circadian regulator 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:23977055)
UniProt
RGD
PMID:23977055 GO_REF:0000024 NCBI chr 9:92,007,289...92,049,551
Ensembl chr 9:92,007,296...92,049,459
JBrowse link
lactate biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htt huntingtin acts_upstream_of_or_within ISO (PMID:17708681) RGD PMID:17708681 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
JBrowse link
G Ldhc lactate dehydrogenase C acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:18367675)
GO_REF:0000107
RGD
Ensembl
PMID:18367675 GO_REF:0000107 NCBI chr 1:97,385,984...97,403,382
Ensembl chr 1:97,382,379...97,403,378
JBrowse link
leukotriene A4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox5 arachidonate 5-lipoxygenase involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:24282679), (PMID:31664810)
(PMID:31642348)
UniProt
Ensembl
RGD
PMID:24282679 PMID:31642348 PMID:31664810 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:149,531,329...149,578,696
Ensembl chr 4:149,531,515...149,578,743
JBrowse link
leukotriene biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox5 arachidonate 5-lipoxygenase involved_in
acts_upstream_of_or_within
TAS
ISO
ISS
(PMID:7809134)
(PMID:19075240)
GO_REF:0000024
(PMID:21233389), (PMID:24893149)
RGD
UniProt
PMID:7809134 PMID:19075240 PMID:21233389 PMID:24893149 PMID:3417684 GO_REF:0000024, RGD:632194 NCBI chr 4:149,531,329...149,578,696
Ensembl chr 4:149,531,515...149,578,743
JBrowse link
G Alox5ap arachidonate 5-lipoxygenase activating protein acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
MGI:2156546 (PMID:19075240), (PMID:9091580)
GO_REF:0000033
(PMID:2300173)
RGD
GO_Central
PMID:2300173 PMID:9091580 PMID:19075240 PMID:2300173 PMID:19075240 GO_REF:0000033, RGD:69749, RGD:2313889 NCBI chr12:5,748,941...5,772,986
Ensembl chr12:5,748,944...5,772,986
JBrowse link
G Fcer1a Fc epsilon receptor Ia acts_upstream_of_or_within ISO (PMID:9000133) RGD PMID:9000133 NCBI chr13:85,686,099...85,692,394
Ensembl chr13:85,686,092...85,692,351
JBrowse link
G Lta4h leukotriene A4 hydrolase involved_in ISO
IBA
ISS
(PMID:11675384), (PMID:15078870), (PMID:9774412)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:9774412 PMID:11675384 PMID:15078870 GO_REF:0000024 GO_REF:0000033 NCBI chr 7:27,969,796...28,001,600
Ensembl chr 7:27,969,789...28,001,600
JBrowse link
G Ltc4s leukotriene C4 synthase involved_in TAS
IEA
IBA
IDA
GO_REF:0000104
GO_REF:0000033
UniProt
GO_Central
RGD
PMID:12767051 PMID:14637132 GO_REF:0000033 GO_REF:0000104, RGD:724432, RGD:2302289 NCBI chr10:34,560,476...34,562,790
Ensembl chr10:34,560,360...34,562,651
JBrowse link
G Mgst2 microsomal glutathione S-transferase 2 involved_in ISO
IBA
(PMID:23409838), (PMID:8703034), (PMID:9092565)
GO_REF:0000033
RGD
GO_Central
PMID:8703034 PMID:9092565 PMID:23409838 GO_REF:0000033 NCBI chr 2:135,679,524...135,715,828
Ensembl chr 2:135,693,557...135,715,828
JBrowse link
G Mgst3 microsomal glutathione S-transferase 3 involved_in ISO (PMID:9278457) RGD PMID:9278457 NCBI chr13:79,526,541...79,547,479
Ensembl chr13:79,526,541...79,547,411
JBrowse link
G Pla2g1b phospholipase A2 group IB involved_in ISO (PMID:16005851) RGD PMID:16005851 NCBI chr12:41,142,193...41,151,967
Ensembl chr12:41,142,200...41,153,226
JBrowse link
G Pla2g4a phospholipase A2 group 4A involved_in ISO
IEA
(PMID:18451993)
(PMID:9403693)
GO_REF:0000043
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:9403693 PMID:18451993 GO_REF:0000043 GO_REF:0000107 NCBI chr13:61,877,818...62,022,261
Ensembl chr13:61,877,813...62,022,266
JBrowse link
G Pla2g5 phospholipase A2, group V involved_in IDA
IEA
ISO
GO_REF:0000107
(PMID:20432503)
Ensembl
RGD
PMID:20432503 PMID:11106649 GO_REF:0000107, RGD:2303037 NCBI chr 5:151,041,339...151,109,433
Ensembl chr 5:151,041,340...151,062,658
JBrowse link
G Prg3 proteoglycan 3, pro eosinophil major basic protein 2 involved_in ISO (PMID:10318872) RGD PMID:10318872 NCBI chr 3:70,071,970...70,078,103
Ensembl chr 3:70,072,497...70,078,102
JBrowse link
G Syk spleen associated tyrosine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2384078 (PMID:9000133)
Ensembl
RGD
PMID:9000133 GO_REF:0000107 NCBI chr17:12,604,615...12,678,437
Ensembl chr17:12,604,619...12,661,410
JBrowse link
leukotriene D4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07044631.2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Ggt1 gamma-glutamyltransferase 1 involved_in ISO (PMID:14754911), (PMID:21447318) RGD PMID:14754911 PMID:21447318 NCBI chr20:13,074,695...13,104,095
Ensembl chr20:13,074,700...13,108,442
JBrowse link
G Ggt5 gamma-glutamyltransferase 5 involved_in
acts_upstream_of_or_within
ISO
IBA
IEA
ISS
(PMID:1676842), (PMID:21447318)
MGI:2182354 (PMID:12163373), (PMID:9774450)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
Ensembl
UniProt
PMID:1676842 PMID:9774450 PMID:12163373 PMID:21447318 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr20:13,043,255...13,071,523
Ensembl chr20:13,043,257...13,071,450
JBrowse link
lipoate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htd2 hydroxyacyl-thioester dehydratase type 2 acts_upstream_of_or_within ISO (PMID:33774475) RGD PMID:33774475 NCBI chr 2:105,222,958...105,223,419 JBrowse link
G Lias lipoic acid synthetase involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
UniProtKB:P60716 (PMID:11389890)
GO_Central
RGD
PMID:11389890 GO_REF:0000033 NCBI chr14:42,876,699...42,893,824
Ensembl chr14:42,876,699...42,893,783
JBrowse link
lipoxin A4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox12 arachidonate 12-lipoxygenase, 12S type involved_in ISS
ISO
GO_REF:0000024
(PMID:8250832)
UniProt
RGD
PMID:8250832 GO_REF:0000024 NCBI chr10:54,958,263...54,970,542
Ensembl chr10:54,958,271...54,970,542
JBrowse link
G Alox15 arachidonate 15-lipoxygenase involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:15708862)
UniProt
Ensembl
RGD
PMID:15708862 GO_REF:0000024 GO_REF:0000107 NCBI chr10:55,060,169...55,068,885
Ensembl chr10:55,060,412...55,068,874
JBrowse link
G Alox15b arachidonate 15-lipoxygenase, type B involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:27145229)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:27145229 GO_REF:0000024 GO_REF:0000107 NCBI chr10:53,892,496...53,901,812
Ensembl chr10:53,892,466...53,901,812
JBrowse link
lipoxin B4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox12 arachidonate 12-lipoxygenase, 12S type involved_in ISS
ISO
GO_REF:0000024
(PMID:8250832)
UniProt
RGD
PMID:8250832 GO_REF:0000024 NCBI chr10:54,958,263...54,970,542
Ensembl chr10:54,958,271...54,970,542
JBrowse link
long-chain fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsbg1 acyl-CoA synthetase bubblegum family member 1 involved_in IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:11381125 GO_REF:0000033, RGD:68727 NCBI chr 8:54,991,294...55,047,276
Ensembl chr 8:54,991,296...55,047,391
JBrowse link
G Acsbg2 acyl-CoA synthetase bubblegum family member 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:1,683,846...1,715,517
Ensembl chr 9:1,683,847...1,714,518
JBrowse link
G Acsbg3 acyl-CoA synthetase bubblegum family member 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:1,715,613...1,727,637
Ensembl chr 9:1,704,674...1,727,634
JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:229,865,662...229,973,253
Ensembl chr 1:229,865,662...229,939,162
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in ISO
ISS
(PMID:20937905)
GO_REF:0000024
RGD
UniProt
PMID:20937905 GO_REF:0000024 NCBI chr 2:218,063,682...218,174,767
Ensembl chr 2:218,063,804...218,171,186
JBrowse link
G Fads1 fatty acid desaturase 1 acts_upstream_of_or_within ISO (PMID:10601301) RGD PMID:10601301 NCBI chr 1:206,827,724...206,842,734
Ensembl chr 1:206,827,765...206,842,734
JBrowse link
G Gstm4 glutathione S-transferase mu 4 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:27791009)
UniProt
Ensembl
RGD
PMID:27791009 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:195,667,940...195,685,315
Ensembl chr 2:195,680,004...195,685,323
JBrowse link
G Ltc4s leukotriene C4 synthase involved_in ISO
IEA
ISS
(PMID:27791009)
GO_REF:0000104
GO_REF:0000024
RGD
UniProt
PMID:27791009 GO_REF:0000024 GO_REF:0000104 NCBI chr10:34,560,476...34,562,790
Ensembl chr10:34,560,360...34,562,651
JBrowse link
G Myo5a myosin VA acts_upstream_of_or_within ISO MGI:1856005 (PMID:1150661) RGD PMID:1150661 NCBI chr 8:75,811,985...75,980,049
Ensembl chr 8:75,812,412...75,975,918
JBrowse link
G Plp1 proteolipid protein 1 acts_upstream_of_or_within ISO MGI:1856065 (PMID:1150661) RGD PMID:1150661 NCBI chr  X:100,184,039...100,201,035
Ensembl chr  X:100,185,767...100,201,032
JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856539 (PMID:1150661)
Ensembl
RGD
PMID:1150661 GO_REF:0000107 NCBI chr 1:50,387,716...50,501,568
Ensembl chr 1:50,387,698...50,498,831
JBrowse link
lysine biosynthetic process via aminoadipic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aasdhppt aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:1,453,226...1,463,990
Ensembl chr 8:1,452,282...1,463,966
JBrowse link
G Aass aminoadipate-semialdehyde synthase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:51,606,461...51,663,136
Ensembl chr 4:51,606,462...51,663,136
JBrowse link
medium-chain fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd1 abhydrolase domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:25,422,526...25,427,514
Ensembl chr 6:25,422,526...25,427,514
JBrowse link
G Abhd2 abhydrolase domain containing 2, acylglycerol lipase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:133,217,403...133,298,564
Ensembl chr 1:133,217,375...133,299,061
JBrowse link
G Abhd3 abhydrolase domain containing 3, phospholipase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:1,723,203...1,778,488
Ensembl chr18:1,720,718...1,803,428
JBrowse link
G Acot7 acyl-CoA thioesterase 7 involved_in ISO
IEA
(PMID:10578051)
GO_REF:0000107
RGD
Ensembl
PMID:10578051 GO_REF:0000107 NCBI chr 5:162,686,562...162,779,309
Ensembl chr 5:162,684,645...162,779,309
JBrowse link
G Olah oleoyl-ACP hydrolase involved_in ISO
IDA
(PMID:26663084)
PMID:8446599
RGD PMID:26663084 PMID:8446599 RGD:13524614 NCBI chr17:74,877,651...74,902,517
Ensembl chr17:74,877,655...74,902,518
JBrowse link
G Oxsm 3-oxoacyl-ACP synthase, mitochondrial involved_in ISO (PMID:15668256) RGD PMID:15668256 NCBI chr15:9,210,443...9,215,852
Ensembl chr15:9,210,547...9,214,558
JBrowse link
methionine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhmt betaine-homocysteine S-methyltransferase acts_upstream_of_or_within IDA
ISO
(PMID:15217352) RGD PMID:15217352 PMID:15845641 RGD:1359026 NCBI chr 2:24,859,871...24,879,449
Ensembl chr 2:24,859,873...24,879,742
JBrowse link
G Bhmt2 betaine-homocysteine S-methyltransferase 2 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 2:24,895,525...24,912,475
Ensembl chr 2:24,895,533...24,912,475
JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO
IEA
(PMID:25633902)
GO_REF:0000107
RGD
Ensembl
PMID:25633902 GO_REF:0000107 NCBI chr 6:94,977,862...95,045,375
Ensembl chr 6:94,977,862...95,045,372
JBrowse link
G Mthfd2l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:17,089,947...17,170,036
Ensembl chr14:17,089,952...17,170,112
JBrowse link
G Mthfr methylenetetrahydrofolate reductase involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:2385823 (PMID:15217352)
GO_Central
RGD
PMID:15217352 GO_REF:0000033 NCBI chr 5:158,465,248...158,484,999
Ensembl chr 5:158,465,296...158,483,797
JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
MGI:2180496 (PMID:11158293)
PMID:20424322
GO_REF:0000033
(PMID:23825108)
RGD
GO_Central
PMID:11158293 PMID:23825108 PMID:15845641 PMID:20424322 PMID:11730351 GO_REF:0000033, RGD:1359026, RGD:10054082, RGD:1601423 NCBI chr17:58,219,998...58,308,560
Ensembl chr17:58,220,071...58,304,822
JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase involved_in ISO
IBA
IEA
(PMID:11466310)
(PMID:17369066)
GO_REF:0000033
GO_REF:0000043
RGD
GO_Central
UniProt
PMID:11466310 PMID:17369066 GO_REF:0000033 GO_REF:0000043 NCBI chr 1:34,866,991...34,899,425
Ensembl chr 1:34,867,089...34,899,425
JBrowse link
monounsaturated fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scd stearoyl-CoA desaturase involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:10899171), (PMID:26098370)
SGD:S000003023 (PMID:16443825)
GO_Central
RGD
PMID:10899171 PMID:16443825 PMID:26098370 GO_REF:0000033 NCBI chr 1:243,269,745...243,282,878
Ensembl chr 1:243,269,747...243,282,562
JBrowse link
G Scd2 stearoyl-Coenzyme A desaturase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
(PMID:16443825)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:16443825 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:243,169,171...243,182,231
Ensembl chr 1:243,169,236...243,182,232
JBrowse link
G Scd3 stearoyl-coenzyme A desaturase 3 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
SGD:S000003023 (PMID:16443825)
GO_Central
RGD
PMID:16443825 GO_REF:0000033 NCBI chr 1:243,093,057...243,114,451
Ensembl chr 1:243,078,774...243,114,229
JBrowse link
G Scd4 stearoyl-coenzyme A desaturase 4 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:12815040)
(PMID:16443825)
GO_Central
RGD
PMID:12815040 PMID:16443825 GO_REF:0000033 NCBI chr 1:243,203,433...243,216,007
Ensembl chr 1:243,203,881...243,215,148
JBrowse link
N-acetylneuraminate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gne glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase involved_in TAS
ISO
IC
IEA
MGI:2182685|MGI:3713799 (PMID:11929971), (PMID:17549255)
(PMID:14707127), (PMID:31121216)
PMID:9305887
GO_REF:0000107
RGD
Ensembl
PMID:11929971 PMID:14707127 PMID:17549255 PMID:31121216 PMID:15330759 More... GO_REF:0000107, RGD:1358725, RGD:401901241 NCBI chr 5:58,267,189...58,307,396
Ensembl chr 5:58,267,210...58,307,499
JBrowse link
G Nanp N-acetylneuraminic acid phosphatase involved_in ISO
IBA
IDA
(PMID:16237198)
GO_REF:0000033
RGD
GO_Central
PMID:16237198 PMID:16237198 GO_REF:0000033, RGD:8554804 NCBI chr 3:139,826,549...139,841,655
Ensembl chr 3:139,826,549...139,841,648
JBrowse link
G Nans N-acetylneuraminate synthase involved_in ISO (PMID:31121216) RGD PMID:31121216 NCBI chr 5:60,780,441...60,797,583
Ensembl chr 5:60,780,392...60,814,950
JBrowse link
negative regulation of (R)-mevalonic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir185 microRNA 185 involved_in ISO RNAcentral:URS00002367FA_9606|RNAcentral:URS00004176D4_9606 (PMID:24296663) RGD PMID:24296663 NCBI chr11:82,664,716...82,664,795
Ensembl chr11:82,664,716...82,664,795
JBrowse link
negative regulation of bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf19 fibroblast growth factor 19 involved_in
acts_upstream_of_or_within
ISO (PMID:12815072)
MGI:1928271 (PMID:23747249)
RGD PMID:12815072 PMID:23747249 NCBI chr 1:200,056,526...200,060,980
Ensembl chr 1:200,056,644...200,060,287
JBrowse link
G Malrd1 MAM and LDL receptor class A domain containing 1 acts_upstream_of_or_within ISO MGI:1096383|MGI:2154956 (PMID:23747249) RGD PMID:23747249 NCBI chr17:78,418,819...79,131,015
Ensembl chr17:78,418,819...79,131,016
JBrowse link
G Mir33 microRNA 33 involved_in ISO (PMID:23536474) RGD PMID:23536474 NCBI chr 7:113,713,855...113,713,923
Ensembl chr 7:113,713,855...113,713,923
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:16488887) RGD PMID:16488887 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
JBrowse link
negative regulation of citrulline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 involved_in ISO (PMID:19278978) RGD PMID:19278978 NCBI chr13:45,156,137...45,255,292
Ensembl chr13:45,156,146...45,255,246
JBrowse link
negative regulation of fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadl acyl-CoA dehydrogenase, long chain involved_in ISO (PMID:15639194) RGD PMID:15639194 NCBI chr 9:68,333,981...68,372,149
Ensembl chr 9:68,333,980...68,372,220
JBrowse link
G Acadvl acyl-CoA dehydrogenase, very long chain involved_in IEA
ISO
GO_REF:0000107
(PMID:15639194)
Ensembl
RGD
PMID:15639194 GO_REF:0000107 NCBI chr10:54,732,875...54,738,102
Ensembl chr10:54,732,469...54,738,075
JBrowse link
G Apoc1 apolipoprotein C1 involved_in ISO (PMID:15576844) RGD PMID:15576844 NCBI chr 1:79,347,057...79,350,340
Ensembl chr 1:79,346,136...79,350,375
JBrowse link
G Apoc3 apolipoprotein C3 involved_in ISO (PMID:11060345), (PMID:18635818) RGD PMID:11060345 PMID:18635818 NCBI chr 8:46,531,478...46,533,658
Ensembl chr 8:46,531,478...46,533,583
JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in ISO
IEA
ISS
(PMID:16326698)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:16326698 GO_REF:0000024 GO_REF:0000107 NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 involved_in IMP PMID:16054098 UniProt PMID:16054098 RGD:11059593 NCBI chr 1:81,043,595...81,060,050
Ensembl chr 1:81,043,595...81,059,992
JBrowse link
G Cyp7a1 cytochrome P450 family 7 subfamily A member 1 involved_in IDA PMID:23536474 BHF-UCL PMID:23536474 RGD:13792517 NCBI chr 5:19,376,979...19,386,676
Ensembl chr 5:19,376,974...19,386,688
JBrowse link
G Dcaf5 DDB1 and CUL4 associated factor 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:99,171,506...99,260,183
Ensembl chr 6:99,171,506...99,260,110
JBrowse link
G Erlin1 ER lipid raft associated 1 involved_in ISO (PMID:24217618) RGD PMID:24217618 NCBI chr 1:242,921,147...242,956,472
Ensembl chr 1:242,921,152...242,956,394
JBrowse link
G Erlin2 ER lipid raft associated 2 involved_in ISO (PMID:24217618) RGD PMID:24217618 NCBI chr16:65,017,654...65,034,184
Ensembl chr16:65,018,532...65,033,671
JBrowse link
G Insig1 insulin induced gene 1 acts_upstream_of_or_within ISO MGI:1920249 (PMID:16100574) RGD PMID:16100574 NCBI chr 4:7,315,494...7,323,972
Ensembl chr 4:7,315,495...7,323,952
JBrowse link
G Insig2 insulin induced gene 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1916289 (PMID:16100574)
Ensembl
RGD
PMID:16100574 GO_REF:0000107 NCBI chr13:32,472,390...32,500,139
Ensembl chr13:32,473,742...32,494,923
JBrowse link
G Klhl25 kelch-like family member 25 involved_in ISO (PMID:27664236) RGD PMID:27664236 NCBI chr 1:129,724,894...129,750,142
Ensembl chr 1:129,722,026...129,750,227
JBrowse link
G Mir185 microRNA 185 acts_upstream_of ISO (PMID:23951060) RGD PMID:23951060 NCBI chr11:82,664,716...82,664,795
Ensembl chr11:82,664,716...82,664,795
JBrowse link
G Mir30c1 microRNA 30c-1 acts_upstream_of ISO (PMID:23749231) RGD PMID:23749231 NCBI chr 5:134,349,237...134,349,325
Ensembl chr 5:134,349,237...134,349,325
JBrowse link
G Mir30c2 microRNA 30c-2 acts_upstream_of ISO (PMID:23749231) RGD PMID:23749231 NCBI chr 9:25,757,342...25,757,425
Ensembl chr 9:25,757,342...25,757,425
JBrowse link
G Mir342 microRNA 342 acts_upstream_of ISO (PMID:23951060) RGD PMID:23951060 NCBI chr 6:127,565,269...127,565,367
Ensembl chr 6:127,565,269...127,565,367
JBrowse link
G Trib3 tribbles pseudokinase 3 involved_in ISO (PMID:16794074) RGD PMID:16794074 NCBI chr 3:140,809,634...140,815,230
Ensembl chr 3:140,809,043...140,814,497
JBrowse link
G Ubr4 ubiquitin protein ligase E3 component n-recognin 4 involved_in IEA
ISO
GO_REF:0000107
(PMID:23932781)
Ensembl
RGD
PMID:23932781 GO_REF:0000107 NCBI chr 5:151,635,825...151,743,931
Ensembl chr 5:151,635,868...151,743,784
JBrowse link
G Wdtc1 WD and tetratricopeptide repeats 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:17767906)
GO_Central
RGD
PMID:17767906 GO_REF:0000033 NCBI chr 5:145,491,460...145,559,631
Ensembl chr 5:145,491,466...145,540,408
JBrowse link
negative regulation of prostaglandin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir204 microRNA 204 involved_in ISO (PMID:29441883) RGD PMID:29441883 NCBI chr 1:220,316,931...220,317,040
Ensembl chr 1:220,316,931...220,317,040
JBrowse link
G Pibf1 progesterone immunomodulatory binding factor 1 involved_in ISO (PMID:3863495) RGD PMID:3863495 NCBI chr15:75,850,389...76,019,711
Ensembl chr15:75,850,624...76,019,712
JBrowse link
G Sirt1 sirtuin 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:20042607)
Ensembl
RGD
PMID:20042607 GO_REF:0000107 NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260
JBrowse link
negative regulation of quinolinate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acmsd aminocarboxymuconate semialdehyde decarboxylase involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000104
(PMID:12140278)
UniProt
RGD
PMID:12140278 GO_REF:0000024 GO_REF:0000104 NCBI chr13:39,200,412...39,245,954
Ensembl chr13:39,200,314...39,245,209
JBrowse link
negative regulation of retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1c3 aldo-keto reductase family 1, member C3 involved_in ISO (PMID:21851338) RGD PMID:21851338 NCBI chr17:66,110,970...66,127,867
Ensembl chr17:66,110,963...66,127,873
JBrowse link
G Prmt3 protein arginine methyltransferase 3 involved_in ISO
IEA
ISS
(PMID:33495566)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:33495566 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:99,492,712...99,581,774
Ensembl chr 1:99,492,724...99,579,435
JBrowse link
ornithine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh18a1 aldehyde dehydrogenase 18 family, member A1 involved_in ISO (PMID:11092761), (PMID:26297558) RGD PMID:11092761 PMID:26297558 NCBI chr 1:239,375,657...239,407,956
Ensembl chr 1:239,375,669...239,407,890
JBrowse link
palmitic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot7 acyl-CoA thioesterase 7 involved_in ISO
IEA
(PMID:10578051)
GO_REF:0000107
RGD
Ensembl
PMID:10578051 GO_REF:0000107 NCBI chr 5:162,686,562...162,779,309
Ensembl chr 5:162,684,645...162,779,309
JBrowse link
positive regulation of bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:18565334), (PMID:19721697)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:18565334 PMID:19721697 GO_REF:0000024 GO_REF:0000107 NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705
JBrowse link
G Star steroidogenic acute regulatory protein involved_in ISO (PMID:18403318) RGD PMID:18403318 NCBI chr16:66,267,094...66,274,368
Ensembl chr16:66,264,807...66,271,672
JBrowse link
G Stard4 StAR-related lipid transfer domain containing 4 involved_in ISO (PMID:18403318) RGD PMID:18403318 NCBI chr18:24,814,683...24,830,024
Ensembl chr18:24,817,107...24,830,024
JBrowse link
positive regulation of fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen acts_upstream_of_or_within ISO (PMID:11606482) RGD PMID:11606482 NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
JBrowse link
G Apoa4 apolipoprotein A4 involved_in ISO
IEA
(PMID:2307668)
GO_REF:0000107
RGD
Ensembl
PMID:2307668 GO_REF:0000107 NCBI chr 8:46,539,083...46,541,464
Ensembl chr 8:46,539,082...46,541,469
JBrowse link
G Apoa5 apolipoprotein A5 involved_in ISO
IEA
(PMID:18635818)
GO_REF:0000107
RGD
Ensembl
PMID:18635818 GO_REF:0000107 NCBI chr 8:46,561,180...46,563,818
Ensembl chr 8:46,561,229...46,563,816
JBrowse link
G Apoc2 apolipoprotein C2 involved_in ISO (PMID:10727238) RGD PMID:10727238 NCBI chr 1:79,329,429...79,334,397
Ensembl chr 1:79,329,428...79,334,476
JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 involved_in ISO
IEA
(PMID:23749231)
GO_REF:0000107
RGD
Ensembl
PMID:23749231 GO_REF:0000107 NCBI chr 8:78,790,846...78,857,307
Ensembl chr 8:78,790,846...78,857,284
JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha IMP RGD PMID:16800817 RGD:1624995 NCBI chr 3:152,186,787...152,248,320
Ensembl chr 3:152,186,787...152,248,320
JBrowse link
G Ins2 insulin 2 involved_in ISO (PMID:14677856) RGD PMID:14677856 NCBI chr 1:197,843,277...197,992,522
Ensembl chr 1:197,843,281...197,864,775
JBrowse link
G Kat2b lysine acetyltransferase 2B involved_in ISO (PMID:23932781) RGD PMID:23932781 NCBI chr 9:6,562,525...6,667,064
Ensembl chr 9:6,562,288...6,667,064
JBrowse link
G Lpgat1 lysophosphatidylglycerol acyltransferase 1 involved_in ISO (PMID:23749231) RGD PMID:23749231 NCBI chr13:103,294,622...103,365,372
Ensembl chr13:103,294,528...103,362,333
JBrowse link
G Mid1ip1 MID1 interacting protein 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:20457939)
UniProt
RGD
PMID:20457939 GO_REF:0000024 NCBI chr  X:12,060,993...12,063,318
Ensembl chr  X:12,060,883...12,065,774
JBrowse link
G Mir96 microRNA 96 involved_in
acts_upstream_of
ISO RNAcentral:URS00001CC379_9606 (PMID:23823476)
(PMID:30460077)
RGD PMID:23823476 PMID:30460077 NCBI chr 4:58,788,411...58,788,516
Ensembl chr 4:58,788,411...58,788,516
JBrowse link
G Mlxipl MLX interacting protein-like involved_in IEA
ISO
GO_REF:0000107
(PMID:15118080)
Ensembl
RGD
PMID:15118080 GO_REF:0000107 NCBI chr12:21,541,608...21,577,120
Ensembl chr12:21,543,576...21,577,112
JBrowse link
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 involved_in ISO
IEA
(PMID:17186944)
GO_REF:0000107
RGD
Ensembl
PMID:17186944 GO_REF:0000107 NCBI chr 1:95,041,967...95,047,358
Ensembl chr 1:95,041,967...95,047,377
JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 involved_in ISO
IEA
(PMID:17186944)
GO_REF:0000107
RGD
Ensembl
PMID:17186944 GO_REF:0000107 NCBI chr 3:77,158,808...77,168,907
Ensembl chr 3:77,158,808...77,168,722
JBrowse link
G Rgn regucalcin IDA RGD PMID:16817230 RGD:9590221 NCBI chr  X:1,619,030...1,634,456
Ensembl chr  X:1,619,032...1,634,450
JBrowse link
G Sirt2 sirtuin 2 involved_in ISO
IEA
(PMID:23932781)
GO_REF:0000107
RGD
Ensembl
PMID:23932781 GO_REF:0000107 NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975
JBrowse link
G Slc45a3 solute carrier family 45, member 3 involved_in ISO (PMID:22521588) RGD PMID:22521588 NCBI chr13:43,407,293...43,427,588
Ensembl chr13:43,407,293...43,427,588
JBrowse link
positive regulation of L-dopa biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Park7 Parkinsonism associated deglycase acts_upstream_of ISS
ISO
GO_REF:0000024
(PMID:16731528)
ParkinsonsUK-UCL
RGD
PMID:16731528 GO_REF:0000024 NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970
JBrowse link
positive regulation of prostaglandin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 IMP RGD PMID:8260938 RGD:2306959 NCBI chr 1:217,861,175...217,877,205
Ensembl chr 1:217,861,175...217,877,343
JBrowse link
G Avp arginine vasopressin IMP RGD PMID:17254553 RGD:2300349 NCBI chr 3:117,793,447...117,805,091
Ensembl chr 3:117,793,457...117,795,425
JBrowse link
G Avpr1a arginine vasopressin receptor 1A IMP RGD PMID:17254553 RGD:2300349 NCBI chr 7:58,114,306...58,118,230
Ensembl chr 7:58,114,284...58,122,215
JBrowse link
G Cd74 CD74 molecule involved_in ISO
IEA
(PMID:24569872)
GO_REF:0000107
RGD
Ensembl
PMID:24569872 GO_REF:0000107 NCBI chr18:54,256,757...54,266,003
Ensembl chr18:54,256,778...54,266,003
JBrowse link
G Il1b interleukin 1 beta involved_in ISO RNAcentral:URS0000424278_9606 (PMID:29384235) RGD PMID:29384235 NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 IMP RGD PMID:9786861 RGD:2304243 NCBI chr10:34,169,661...34,211,138
Ensembl chr10:34,169,675...34,210,178
JBrowse link
G Pla2g3 phospholipase A2, group III involved_in ISO (PMID:23624557) RGD PMID:23624557 NCBI chr14:78,367,625...78,373,913
Ensembl chr14:78,368,105...78,373,913
JBrowse link
G Pla2g4a phospholipase A2 group 4A IMP RGD PMID:16203828 RGD:1642461 NCBI chr13:61,877,818...62,022,261
Ensembl chr13:61,877,813...62,022,266
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma involved_in ISO (PMID:24287039) RGD PMID:24287039 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 involved_in ISO (PMID:21716255) RGD PMID:21716255 NCBI chr13:62,163,936...62,172,193
Ensembl chr13:62,163,932...62,172,188
JBrowse link
positive regulation of retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rdh10 retinol dehydrogenase 10 IMP RGD PMID:21138835 RGD:6771354 NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572
JBrowse link
G Rdh16 retinol dehydrogenase 16 IMP RGD PMID:21138835 RGD:6771354 NCBI chr 7:63,616,711...63,625,053
Ensembl chr 7:63,597,536...63,624,124
JBrowse link
positive regulation of unsaturated fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO (PMID:18854420) RGD PMID:18854420 NCBI chr  X:151,428,334...151,450,115
Ensembl chr  X:151,428,578...151,450,115
JBrowse link
G Abcd2 ATP binding cassette subfamily D member 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:18854420)
UniProt
RGD
PMID:18854420 GO_REF:0000024 NCBI chr 7:122,263,034...122,311,642
Ensembl chr 7:122,263,032...122,311,642
JBrowse link
proline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh18a1 aldehyde dehydrogenase 18 family, member A1 involved_in ISO (PMID:11092761), (PMID:26297558) RGD PMID:11092761 PMID:26297558 NCBI chr 1:239,375,657...239,407,956
Ensembl chr 1:239,375,669...239,407,890
JBrowse link
G Pycr1 pyrroline-5-carboxylate reductase 1 involved_in ISO (PMID:16730026) RGD PMID:16730026 NCBI chr10:105,917,732...105,922,658
Ensembl chr10:105,917,680...105,922,549
JBrowse link
G Pycr2 pyrroline-5-carboxylate reductase 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:23024808)
UniProt
RGD
PMID:23024808 GO_REF:0000024 NCBI chr13:92,626,462...92,630,256
Ensembl chr13:92,626,471...92,634,184
JBrowse link
propionate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acss1 acyl-CoA synthetase short-chain family member 1 IDA RGD PMID:4334748 RGD:2317572 NCBI chr 3:139,450,383...139,500,325
Ensembl chr 3:139,450,383...139,500,325
JBrowse link
G Acss2 acyl-CoA synthetase short-chain family member 2 IDA RGD PMID:4334748 RGD:2317572 NCBI chr 3:144,003,808...144,047,452
Ensembl chr 3:144,004,336...144,059,675
JBrowse link
prostaglandin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07054614.1 involved_in IEA GO_REF:0000107
GO_REF:0000043
Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107
G Akr1c15 aldo-keto reductase family 1, member C15 involved_in ISO (PMID:25726376) RGD PMID:25726376 NCBI chr17:66,181,493...66,208,090
Ensembl chr17:66,181,493...66,208,061
JBrowse link
G Cd74 CD74 molecule involved_in ISO
IEA
ISS
(PMID:12782713)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:12782713 GO_REF:0000024 GO_REF:0000107 NCBI chr18:54,256,757...54,266,003
Ensembl chr18:54,256,778...54,266,003
JBrowse link
G Daglb diacylglycerol lipase, beta involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:23103940)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23103940 GO_REF:0000024 GO_REF:0000107 NCBI chr12:11,059,732...11,102,170
Ensembl chr12:11,059,732...11,102,154
JBrowse link
G Edn1 endothelin 1 involved_in ISO (PMID:9492062) RGD PMID:9492062 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
JBrowse link
G Edn2 endothelin 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:9492062)
Ensembl
RGD
PMID:9492062 GO_REF:0000107 NCBI chr 5:133,751,316...133,756,814
Ensembl chr 5:133,751,217...133,756,814
JBrowse link
G Hpgds hematopoietic prostaglandin D synthase TAS RGD PMID:9323136 RGD:68838 NCBI chr 4:94,368,426...94,397,931
Ensembl chr 4:94,373,342...94,397,883
JBrowse link
G Mif macrophage migration inhibitory factor involved_in ISO (PMID:12782713) RGD PMID:12782713 NCBI chr20:12,790,919...12,791,784
Ensembl chr20:12,790,902...12,799,504
JBrowse link
G Pla2g10 phospholipase A2, group X involved_in IEA
ISO
GO_REF:0000107
(PMID:27292189)
Ensembl
RGD
PMID:27292189 GO_REF:0000107 NCBI chr10:1,597,761...1,610,822
Ensembl chr10:1,597,761...1,609,000
JBrowse link
G Pla2g2a phospholipase A2 group IIA involved_in ISO (PMID:27292189) RGD PMID:27292189 NCBI chr 5:151,076,442...151,079,019
Ensembl chr 5:151,076,442...151,079,014
JBrowse link
G Pla2g4a phospholipase A2 group 4A involved_in ISO
IEA
ISS
(PMID:18451993), (PMID:27642067)
(PMID:9403692), (PMID:9403693)
GO_REF:0000043
GO_REF:0000107
GO_REF:0000024
GO_REF:0000041
RGD
UniProt
Ensembl
PMID:9403692 PMID:9403693 PMID:18451993 PMID:27642067 GO_REF:0000024 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chr13:61,877,818...62,022,261
Ensembl chr13:61,877,813...62,022,266
JBrowse link
G Pla2g4f phospholipase A2, group IVF acts_upstream_of_or_within ISO (PMID:17293613) RGD PMID:17293613 NCBI chr 3:107,249,053...107,266,201
Ensembl chr 3:107,250,075...107,264,689
JBrowse link
G Pnpla8 patatin-like phospholipase domain containing 8 involved_in ISO (PMID:15695510) RGD PMID:15695510 NCBI chr 6:61,329,810...61,391,736
Ensembl chr 6:61,329,810...61,391,734
JBrowse link
G Prxl2b peroxiredoxin like 2B involved_in ISS
ISO
IBA
PMID:18006499
(PMID:18006499)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:18006499 PMID:18006499 GO_REF:0000024 GO_REF:0000033, RGD:8552775 NCBI chr 5:165,462,610...165,465,213 JBrowse link
G Ptgds prostaglandin D2 synthase involved_in IDA
ISO
PMID:7836410
(PMID:17715133)
(PMID:20347284), (PMID:20667974)
RGD PMID:17715133 PMID:20347284 PMID:20667974 PMID:7836410 RGD:8553429 NCBI chr 3:8,281,899...8,284,833
Ensembl chr 3:8,281,899...8,284,833
JBrowse link
G Ptges prostaglandin E synthase involved_in TAS
ISO
IBA
IEA
IDA
(PMID:11795891)
GO_REF:0000033
(PMID:25726376)
(PMID:18682561)
GO_REF:0000041
RGD
GO_Central
UniProt
PMID:11795891 PMID:18682561 PMID:25726376 PMID:11067848 PMID:11067848 GO_REF:0000033 GO_REF:0000041, RGD:67929, RGD:67929 NCBI chr 3:14,177,892...14,189,236 JBrowse link
G Ptges2 prostaglandin E synthase 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:15,690,501...15,697,688
Ensembl chr 3:15,690,501...15,697,688
JBrowse link
G Ptges3 prostaglandin E synthase 3 acts_upstream_of_or_within
involved_in
IMP
ISO
IBA
IEA
ISS
IDA
MGI:3701300 (PMID:17438133)
GO_REF:0000033
GO_REF:0000043
GO_REF:0000041
GO_REF:0000024
(PMID:10922363)
RGD
GO_Central
UniProt
PMID:10922363 PMID:17438133 PMID:10922363 PMID:10922363 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043, RGD:5688071, RGD:5688071 NCBI chr 7:490,698...507,759
Ensembl chr 7:490,656...508,084
JBrowse link
G Ptges3l1 prostaglandin E synthase 3-like 1 involved_in IEA
IBA
GO_REF:0000041
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000041 NCBI chr  X:42,215,200...42,224,472
Ensembl chr  X:42,214,756...42,225,047
JBrowse link
G Ptgis prostaglandin I2 synthase involved_in IMP
IEA
IBA
ISO
ISS
IDA
GO_REF:0000043
GO_REF:0000033
GO_REF:0000107
(PMID:15115769), (PMID:20122998), (PMID:21296955)
GO_REF:0000024
UniProt
GO_Central
Ensembl
RGD
PMID:15115769 PMID:20122998 PMID:21296955 PMID:10359560 PMID:10536678 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107, RGD:727270, RGD:401959739, RGD:1580695, RGD:8693629 NCBI chr 3:155,928,564...155,964,228
Ensembl chr 3:155,916,412...155,965,451
JBrowse link
G Ptgs1 prostaglandin-endoperoxide synthase 1 acts_upstream_of_or_within
involved_in
IMP
ISO
ISS
MGI:1857238 (PMID:12093889)
GO_REF:0000024
RGD
UniProt
PMID:12093889 PMID:17673564 GO_REF:0000024, RGD:2300259 NCBI chr 3:19,584,015...19,605,589
Ensembl chr 3:19,584,015...19,605,586
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 involved_in IMP
ISO
(PMID:12925531)
(PMID:27642067)
RGD PMID:12925531 PMID:27642067 PMID:17673564 RGD:2300259 NCBI chr13:62,163,936...62,172,193
Ensembl chr13:62,163,932...62,172,188
JBrowse link
G Tbxas1 thromboxane A synthase 1 involved_in ISO
ISS
(PMID:11097184)
GO_REF:0000024
RGD
UniProt
PMID:11097184 GO_REF:0000024 NCBI chr 4:67,664,963...67,837,096
Ensembl chr 4:67,665,007...67,837,096
JBrowse link
pyruvate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate aminotransferase IDA RGD PMID:12383475 RGD:1599457 NCBI chr 9:93,675,384...93,685,337
Ensembl chr 9:93,675,384...93,685,336
JBrowse link
G Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in ISO (PMID:21998747) RGD PMID:21998747 NCBI chr 1:240,856,991...240,884,243
Ensembl chr 1:240,857,126...240,884,568
JBrowse link
G Pklr pyruvate kinase L/R IDA RGD PMID:5492954 PMID:4273555 RGD:2302789, RGD:2302790 NCBI chr 2:174,543,008...174,551,863
Ensembl chr 2:174,543,039...174,551,870
JBrowse link
G Pkm pyruvate kinase M1/2 IDA RGD PMID:4273555 RGD:2302790 NCBI chr 8:60,057,629...60,079,600
Ensembl chr 8:60,057,402...60,079,599
JBrowse link
G Sds serine dehydratase involved_in ISO
IEA
(PMID:15689518)
GO_REF:0000107
RGD
Ensembl
PMID:15689518 GO_REF:0000107 NCBI chr12:36,083,226...36,090,540
Ensembl chr12:36,083,229...36,088,203
JBrowse link
G Srr serine racemase involved_in ISO (PMID:18812225) RGD PMID:18812225 NCBI chr10:59,769,563...59,786,688
Ensembl chr10:59,769,571...59,787,011
JBrowse link
quinolinate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Haao 3-hydroxyanthranilate 3,4-dioxygenase involved_in ISO
IEA
(PMID:28792876)
GO_REF:0000104
RGD
UniProt
PMID:28792876 GO_REF:0000104 NCBI chr 6:10,845,235...10,864,863
Ensembl chr 6:10,845,771...10,864,877
JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO MGI:1861934|MGI:1861935 (PMID:16697652) RGD PMID:16697652 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 involved_in ISO
IEA
(PMID:2419335)
GO_REF:0000107
RGD
Ensembl
PMID:2419335 GO_REF:0000107 NCBI chr16:67,430,654...67,442,726
Ensembl chr16:67,430,578...67,442,730
JBrowse link
G Kmo kynurenine 3-monooxygenase involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr13:87,557,080...87,589,334
Ensembl chr13:87,557,286...87,588,881
JBrowse link
G Kynu kynureninase involved_in ISO
IEA
(PMID:9291104)
GO_REF:0000104
RGD
UniProt
PMID:9291104 GO_REF:0000104 NCBI chr 3:27,778,646...27,929,470
Ensembl chr 3:27,778,772...27,929,488
JBrowse link
regulation of arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (PMID:19284480) RGD PMID:19284480 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
JBrowse link
regulation of bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ces1d carboxylesterase 1D involved_in ISO (PMID:18599737) RGD PMID:18599737 NCBI chr19:13,873,490...13,912,035
Ensembl chr19:13,796,623...13,912,035
JBrowse link
G Cyp7a1 cytochrome P450 family 7 subfamily A member 1 involved_in ISO
IDA
(PMID:19965590)
PMID:1694852
RGD PMID:19965590 PMID:1694852 RGD:70534 NCBI chr 5:19,376,979...19,386,676
Ensembl chr 5:19,376,974...19,386,688
JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 involved_in ISO
IBA
IEA
ISS
(PMID:17623664), (PMID:20683963)
(PMID:10809780)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
Ensembl
UniProt
PMID:10809780 PMID:17623664 PMID:20683963 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr17:9,461,541...9,476,268
Ensembl chr17:9,461,547...9,476,242
JBrowse link
G Sirt1 sirtuin 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:20375098)
Ensembl
RGD
PMID:20375098 GO_REF:0000107 NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260
JBrowse link
regulation of fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif6 eukaryotic translation initiation factor 6 involved_in ISS
ISO
GO_REF:0000024
(PMID:26383020)
UniProt
RGD
PMID:26383020 GO_REF:0000024 NCBI chr 3:144,325,038...144,331,396
Ensembl chr 3:144,325,036...144,331,401
JBrowse link
G Gip gastric inhibitory polypeptide involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:80,968,360...80,976,506
Ensembl chr10:80,968,352...80,976,503
JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:19627255)
GO_REF:0000107
(PMID:21852536)
UniProt
RGD
Ensembl
PMID:19627255 PMID:21852536 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:33,591,796...33,601,798
Ensembl chr 4:33,589,799...33,601,850
JBrowse link
G Scap SREBF chaperone acts_upstream_of_or_within ISO MGI:2148743|MGI:2180899 (PMID:16054043) RGD PMID:16054043 NCBI chr 8:110,306,026...110,360,677
Ensembl chr 8:110,306,031...110,360,666
JBrowse link
regulation of prostaglandin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fabp5 fatty acid binding protein 5 involved_in ISO (PMID:29440395) RGD PMID:29440395 NCBI chr 2:91,765,056...91,768,716
Ensembl chr 2:91,765,056...91,853,773
JBrowse link
retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 IMP RGD PMID:21138835 RGD:6771354 NCBI chr 1:218,000,470...218,152,962
Ensembl chr 1:218,042,127...218,152,961
JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 involved_in IEP
ISO
ISS
IMP
(PMID:29240402), (PMID:33565183)
GO_REF:0000024
RGD
UniProt
PMID:29240402 PMID:33565183 PMID:15950969 PMID:21138835 GO_REF:0000024, RGD:6771322, RGD:6771354 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107
JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 involved_in
acts_upstream_of_or_within
IEP
ISO
ISS
IEA
IMP
(PMID:14623956)
(PMID:11013254), (PMID:11044606), (PMID:16241904)
(PMID:27759097)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:11013254 PMID:11044606 PMID:14623956 PMID:16241904 PMID:27759097 More... GO_REF:0000024 GO_REF:0000107, RGD:6771322, RGD:6771354 NCBI chr 1:119,982,272...120,017,416
Ensembl chr 1:119,982,277...120,017,436
JBrowse link
G Crabp2 cellular retinoic acid binding protein 2 IEP RGD PMID:15950969 RGD:6771322 NCBI chr 2:173,417,004...173,421,352
Ensembl chr 2:173,416,857...173,421,379
JBrowse link
G Dhrs9 dehydrogenase/reductase 9 IEP
IDA
RGD PMID:15950969 PMID:21138835 RGD:6771322, RGD:6771354 NCBI chr 3:54,147,834...54,170,052
Ensembl chr 3:54,147,803...54,220,241
JBrowse link
G Rbp1 retinol binding protein 1 IEP RGD PMID:15950969 RGD:6771322 NCBI chr 8:99,025,218...99,046,740
Ensembl chr 8:99,025,206...99,046,743
JBrowse link
G Rdh10 retinol dehydrogenase 10 acts_upstream_of_or_within ISO (PMID:17473173) RGD PMID:17473173 NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572
JBrowse link
selenocysteine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sephs1 selenophosphate synthetase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:73,354,435...73,382,803
Ensembl chr17:73,356,530...73,382,593
JBrowse link
G Sephs2 selenophosphate synthetase 2 acts_upstream_of_or_within ISO (PMID:17346238) RGD PMID:17346238 NCBI chr 1:181,893,146...181,895,464
Ensembl chr 1:181,892,599...181,895,497
JBrowse link
serine family amino acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO
IEA
(PMID:25633902)
GO_REF:0000107
RGD
Ensembl
PMID:25633902 GO_REF:0000107 NCBI chr 6:94,977,862...95,045,375
Ensembl chr 6:94,977,862...95,045,372
JBrowse link
G Phgdh phosphoglycerate dehydrogenase TAS RGD PMID:9163325 RGD:61693 NCBI chr 2:185,906,962...185,936,054
Ensembl chr 2:185,906,966...185,935,944
JBrowse link
short-chain fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oxsm 3-oxoacyl-ACP synthase, mitochondrial involved_in ISO (PMID:15668256) RGD PMID:15668256 NCBI chr15:9,210,443...9,215,852
Ensembl chr15:9,210,547...9,214,558
JBrowse link
threonine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Thnsl2 threonine synthase-like 2 NOT|acts_upstream_of_or_within ISO (PMID:17034760) RGD PMID:17034760 NCBI chr 4:103,112,974...103,132,122
Ensembl chr 4:103,112,963...103,132,017
JBrowse link
tyrosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pah phenylalanine hydroxylase involved_in IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:16953590 GO_REF:0000033, RGD:1601531 NCBI chr 7:21,933,179...21,998,134
Ensembl chr 7:21,933,179...21,998,130
JBrowse link
tyrosine biosynthetic process, by oxidation of phenylalanine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pah phenylalanine hydroxylase involved_in IDA
IEA
GO_REF:0000108 GOC
RGD
PMID:10839989 GO_REF:0000108, RGD:1601535 NCBI chr 7:21,933,179...21,998,134
Ensembl chr 7:21,933,179...21,998,130
JBrowse link
G Pcbd1 pterin-4 alpha-carbinolamine dehydratase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr20:29,037,545...29,044,322
Ensembl chr20:28,953,864...29,044,292
Ensembl chr20:28,953,864...29,044,292
JBrowse link
G Pcbd2 pterin-4 alpha-carbinolamine dehydratase 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:8,845,161...8,896,343
Ensembl chr17:8,845,084...8,910,539
JBrowse link
G Txndc15 thioredoxin domain containing 15 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:8,898,074...8,910,538
Ensembl chr17:8,845,084...8,910,539
JBrowse link
UDP-glucuronate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ugdh UDP-glucose 6-dehydrogenase involved_in IEA
ISO
ISS
GO_REF:0000041
(PMID:32768525)
GO_REF:0000024
(PMID:27966912)
UniProt
RGD
PMID:27966912 PMID:32768525 GO_REF:0000024 GO_REF:0000041 NCBI chr14:42,848,704...42,872,351
Ensembl chr14:42,848,854...42,872,354
JBrowse link
G Ugp2 UDP-glucose pyrophosphorylase 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:32286295)
Ensembl
RGD
PMID:32286295 GO_REF:0000107 NCBI chr14:95,456,330...95,497,483
Ensembl chr14:95,456,330...95,496,830
JBrowse link
unsaturated fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Decr2 2,4-dienoyl-CoA reductase 2 involved_in ISO (PMID:11514237) RGD PMID:11514237 NCBI chr10:15,104,907...15,113,281
Ensembl chr10:15,002,926...15,118,479
JBrowse link
G Elovl1 ELOVL fatty acid elongase 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 5:131,961,478...131,965,961
Ensembl chr 5:131,961,322...131,965,958
JBrowse link
G Elovl2 ELOVL fatty acid elongase 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:23,544,598...23,584,855
Ensembl chr17:23,544,568...23,584,848
JBrowse link
G Elovl3 ELOVL fatty acid elongase 3 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:244,997,287...245,001,115
Ensembl chr 1:244,997,287...245,001,115
JBrowse link
G Elovl4 ELOVL fatty acid elongase 4 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 8:84,702,916...84,729,466
Ensembl chr 8:84,702,362...84,729,697
JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 8:78,790,846...78,857,307
Ensembl chr 8:78,790,846...78,857,284
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 2:218,063,682...218,174,767
Ensembl chr 2:218,063,804...218,171,186
JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 2:39,789,229...39,858,579
Ensembl chr 2:39,789,250...39,856,845
JBrowse link
G Fads1 fatty acid desaturase 1 acts_upstream_of_or_within
involved_in
IDA
ISO
IEA
(PMID:10601301)
GO_REF:0000041
RGD
UniProt
PMID:10601301 PMID:11414679 GO_REF:0000041, RGD:632758 NCBI chr 1:206,827,724...206,842,734
Ensembl chr 1:206,827,765...206,842,734
JBrowse link
G Fads2 fatty acid desaturase 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:206,707,384...206,747,333
Ensembl chr 1:206,708,783...206,748,789
JBrowse link
G Fads2b fatty acid desaturase 2B involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:70,535,735...70,575,163
Ensembl chr 3:70,535,459...70,575,442
JBrowse link
G Fads3 fatty acid desaturase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000041
(PMID:28838557)
UniProt
RGD
PMID:28838557 GO_REF:0000041 NCBI chr 1:206,685,667...206,702,538
Ensembl chr 1:206,685,894...206,704,769
JBrowse link
G Scd stearoyl-CoA desaturase involved_in IMP
IBA
IDA
ISO
PMID:7947684
GO_REF:0000033
PMID:2892838
(PMID:15907797), (PMID:18765284)
GO_Central
RGD
PMID:15907797 PMID:18765284 PMID:7947684 PMID:2892838 GO_REF:0000033, RGD:10054069, RGD:10054074 NCBI chr 1:243,269,745...243,282,878
Ensembl chr 1:243,269,747...243,282,562
JBrowse link
G Scd2 stearoyl-Coenzyme A desaturase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:243,169,171...243,182,231
Ensembl chr 1:243,169,236...243,182,232
JBrowse link
G Scd3 stearoyl-coenzyme A desaturase 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:243,093,057...243,114,451
Ensembl chr 1:243,078,774...243,114,229
JBrowse link
G Scd4 stearoyl-coenzyme A desaturase 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:243,203,433...243,216,007
Ensembl chr 1:243,203,881...243,215,148
JBrowse link
uroporphyrinogen III biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Uros uroporphyrinogen III synthase involved_in IDA
IBA
ISO
GO_REF:0000033
(PMID:18004775), (PMID:3174619), (PMID:3805019)
GO_Central
RGD
PMID:3174619 PMID:3805019 PMID:18004775 PMID:17763925 GO_REF:0000033, RGD:4144811 NCBI chr 1:188,490,832...188,513,659
Ensembl chr 1:188,490,323...188,512,249
JBrowse link
very long-chain fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elovl1 ELOVL fatty acid elongase 1 involved_in ISO
IBA
(PMID:20166112), (PMID:20937905)
GO_REF:0000033
RGD
GO_Central
PMID:20166112 PMID:20937905 GO_REF:0000033 NCBI chr 5:131,961,478...131,965,961
Ensembl chr 5:131,961,322...131,965,958
JBrowse link
G Elovl2 ELOVL fatty acid elongase 2 involved_in ISO
IBA
IEA
(PMID:12371743), (PMID:20937905)
(PMID:12371743), (PMID:21106902)
GO_REF:0000033
GO_REF:0000104
RGD
GO_Central
UniProt
PMID:12371743 PMID:20937905 PMID:21106902 GO_REF:0000033 GO_REF:0000104 NCBI chr17:23,544,598...23,584,855
Ensembl chr17:23,544,568...23,584,848
JBrowse link
G Elovl3 ELOVL fatty acid elongase 3 involved_in ISO
IBA
(PMID:20937905)
(PMID:14581464)
GO_REF:0000033
RGD
GO_Central
PMID:14581464 PMID:20937905 GO_REF:0000033 NCBI chr 1:244,997,287...245,001,115
Ensembl chr 1:244,997,287...245,001,115
JBrowse link
G Elovl4 ELOVL fatty acid elongase 4 involved_in ISO
IBA
(PMID:20937905)
GO_REF:0000033
RGD
GO_Central
PMID:20937905 GO_REF:0000033 NCBI chr 8:84,702,916...84,729,466
Ensembl chr 8:84,702,362...84,729,697
JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 involved_in IDA
IBA
IEA
ISO
PMID:12005057
GO_REF:0000033
GO_REF:0000104
(PMID:20427700), (PMID:20937905)
GO_Central
UniProt
RGD
PMID:20427700 PMID:20937905 PMID:12005057 GO_REF:0000033 GO_REF:0000104, RGD:8554529 NCBI chr 8:78,790,846...78,857,307
Ensembl chr 8:78,790,846...78,857,284
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:218,063,682...218,174,767
Ensembl chr 2:218,063,804...218,171,186
JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 involved_in ISO
IBA
IEA
(PMID:19826053), (PMID:20937905)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:19826053 PMID:20937905 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:39,789,229...39,858,579
Ensembl chr 2:39,789,250...39,856,845
JBrowse link
G Fads2 fatty acid desaturase 2 TAS RGD PMID:11988075 RGD:70542 NCBI chr 1:206,707,384...206,747,333
Ensembl chr 1:206,708,783...206,748,789
JBrowse link
G Hacd1 3-hydroxyacyl-CoA dehydratase 1 involved_in ISO
IBA
(PMID:18554506)
GO_REF:0000033
RGD
GO_Central
PMID:18554506 GO_REF:0000033 NCBI chr17:77,081,508...77,106,114
Ensembl chr17:77,083,740...77,106,073
JBrowse link
G Hacd2 3-hydroxyacyl-CoA dehydratase 2 involved_in ISO
IBA
(PMID:18554506)
GO_REF:0000033
RGD
GO_Central
PMID:18554506 GO_REF:0000033 NCBI chr11:65,667,671...65,762,903
Ensembl chr11:65,670,281...65,762,889
JBrowse link
G Hacd3 3-hydroxyacyl-CoA dehydratase 3 involved_in ISO
IBA
(PMID:18554506)
GO_REF:0000033
RGD
GO_Central
PMID:18554506 GO_REF:0000033 NCBI chr 8:65,501,240...65,538,507
Ensembl chr 8:65,501,240...65,538,507
JBrowse link
G Hacd4 3-hydroxyacyl-CoA dehydratase 4 involved_in ISO
IBA
(PMID:18554506)
GO_REF:0000033
RGD
GO_Central
PMID:18554506 GO_REF:0000033 NCBI chr 5:102,887,597...102,915,376
Ensembl chr 5:102,887,588...102,915,338
JBrowse link
G Tecr trans-2,3-enoyl-CoA reductase involved_in ISO
IBA
IEA
ISS
(PMID:12482854), (PMID:24220030)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
Ensembl
UniProt
PMID:12482854 PMID:24220030 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr19:24,526,700...24,568,168
Ensembl chr19:24,541,615...24,568,168
JBrowse link
G Tecrl trans-2,3-enoyl-CoA reductase-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:24,732,241...24,805,272
Ensembl chr14:24,732,241...24,805,272
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20052
    cellular process 19130
      metabolic process 11925
        small molecule metabolic process 1913
          organic acid metabolic process 1043
            organic acid biosynthetic process 331
              carboxylic acid biosynthetic process 327
                L-ascorbic acid biosynthetic process + 5
                N-acetylneuraminate biosynthetic process 3
                UDP-glucuronate biosynthetic process 2
                achromobactin biosynthetic process 0
                alginic acid biosynthetic process 0
                alpha-amino acid biosynthetic process + 69
                amino acid catabolic process to carboxylic acid via Ehrlich pathway + 0
                amino acid salvage + 7
                aromatic amino acid family biosynthetic process + 7
                bacillithiol biosynthetic process 0
                branched-chain amino acid biosynthetic process + 5
                carnosine biosynthetic process 1
                cephalosporin C biosynthetic process 0
                chrysobactin biosynthetic process 0
                cspyrone B1 biosynthetic process 0
                dicarboxylic acid biosynthetic process + 15
                endocrocin biosynthetic process + 0
                fructoselysine biosynthetic process 0
                fumonisin biosynthetic process + 0
                gerfelin biosynthetic process + 0
                gibberellin biosynthetic process + 0
                helvolic acid biosynthetic process + 0
                homomethionine biosynthetic process 0
                icosanoid biosynthetic process + 60
                keto-3-deoxy-D-manno-octulosonic acid biosynthetic process 0
                mannosylglycerate biosynthetic process 0
                monensin A biosynthetic process 0
                monocarboxylic acid biosynthetic process + 223
                monodictyphenone biosynthetic process + 0
                non-proteinogenic amino acid biosynthetic process + 16
                oxylipin biosynthetic process 0
                proteinogenic amino acid biosynthetic process + 63
                pyochelin biosynthetic process 0
                rhizobactin 1021 biosynthetic process 0
                sulfur amino acid biosynthetic process + 15
                tatiopterin biosynthetic process + 0
                tensidol B biosynthetic process + 0
                tricarboxylic acid biosynthetic process + 0
                uroporphyrinogen III biosynthetic process + 1
Path 2
Term Annotations click to browse term
  biological_process 20052
    cellular process 19130
      metabolic process 11925
        small molecule metabolic process 1913
          organic acid metabolic process 1043
            oxoacid metabolic process 1031
              carboxylic acid metabolic process 1016
                carboxylic acid biosynthetic process 327
                  L-ascorbic acid biosynthetic process + 5
                  N-acetylneuraminate biosynthetic process 3
                  UDP-glucuronate biosynthetic process 2
                  achromobactin biosynthetic process 0
                  alginic acid biosynthetic process 0
                  alpha-amino acid biosynthetic process + 69
                  amino acid catabolic process to carboxylic acid via Ehrlich pathway + 0
                  amino acid salvage + 7
                  aromatic amino acid family biosynthetic process + 7
                  bacillithiol biosynthetic process 0
                  branched-chain amino acid biosynthetic process + 5
                  carnosine biosynthetic process 1
                  cephalosporin C biosynthetic process 0
                  chrysobactin biosynthetic process 0
                  cspyrone B1 biosynthetic process 0
                  dicarboxylic acid biosynthetic process + 15
                  endocrocin biosynthetic process + 0
                  fructoselysine biosynthetic process 0
                  fumonisin biosynthetic process + 0
                  gerfelin biosynthetic process + 0
                  gibberellin biosynthetic process + 0
                  helvolic acid biosynthetic process + 0
                  homomethionine biosynthetic process 0
                  icosanoid biosynthetic process + 60
                  keto-3-deoxy-D-manno-octulosonic acid biosynthetic process 0
                  mannosylglycerate biosynthetic process 0
                  monensin A biosynthetic process 0
                  monocarboxylic acid biosynthetic process + 223
                  monodictyphenone biosynthetic process + 0
                  non-proteinogenic amino acid biosynthetic process + 16
                  oxylipin biosynthetic process 0
                  proteinogenic amino acid biosynthetic process + 63
                  pyochelin biosynthetic process 0
                  rhizobactin 1021 biosynthetic process 0
                  sulfur amino acid biosynthetic process + 15
                  tatiopterin biosynthetic process + 0
                  tensidol B biosynthetic process + 0
                  tricarboxylic acid biosynthetic process + 0
                  uroporphyrinogen III biosynthetic process + 1
paths to the root