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Gene: CHST12 (carbohydrate sulfotransferase 12) Pan paniscus

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Symbol:

CHST12

Name:

carbohydrate sulfotransferase 12

RGD ID:

11792636

Description:

ENCODES a protein that exhibits chondroitin 4-sulfotransferase activity (inferred); sulfotransferase activity (inferred); transferase activity (inferred); INVOLVED IN carbohydrate biosynthetic process (inferred); chondroitin sulfate biosynthetic process (inferred); dermatan sulfate biosynthetic process (inferred); ASSOCIATED WITH autism spectrum disorder (ortholog); hypertension (ortholog); FOUND IN Golgi apparatus (inferred); Golgi membrane (inferred); membrane (inferred)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	7,362,530 - 7,393,279 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	55,687,252 - 55,721,069 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	2,666,062 - 2,697,292 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	2,763,706 - 2,794,147 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	2,792,210 - 2,793,454 (+)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autism spectrum disorder (ISO)

hypertension (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

carbohydrate biosynthetic process (IEA)

chondroitin sulfate biosynthetic process (IEA)

dermatan sulfate biosynthetic process (IEA)

proteoglycan biosynthetic process (IEA)

Cellular Component

Golgi apparatus (IEA)

Golgi membrane (IEA)

membrane (IEA)

Molecular Function

chondroitin 4-sulfotransferase activity (IEA)

sulfotransferase activity (IEA)

transferase activity (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

CHST12
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	7,362,530 - 7,393,279 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	55,687,252 - 55,721,069 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	2,666,062 - 2,697,292 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	2,763,706 - 2,794,147 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	2,792,210 - 2,793,454 (+)	Ensembl	panpan1.1		panPan2

CHST12
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	2,403,448 - 2,448,484 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	2,403,588 - 2,448,484 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	2,443,246 - 2,488,119 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	2,409,785 - 2,440,766 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	7	2,216,463 - 2,247,455	NCBI
Celera	7	2,412,652 - 2,443,589 (+)	NCBI		Celera
Cytogenetic Map	7	p22.3	NCBI
HuRef	7	2,362,154 - 2,393,179 (+)	NCBI		HuRef
CHM1_1	7	2,442,784 - 2,473,806 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	7	2,516,863 - 2,561,873 (+)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	2,491,089 - 2,522,136 (+)	NCBI

Chst12
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	140,491,398 - 140,510,993 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	140,491,305 - 140,511,479 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	140,505,569 - 140,525,238 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	140,505,550 - 140,525,724 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	140,981,563 - 141,001,192 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	140,758,102 - 140,777,712 (+)	NCBI		MGSCv36	mm8
Celera	5	137,565,564 - 137,585,192 (+)	NCBI		Celera
Cytogenetic Map	5	G2	NCBI
cM Map	5	79.04	NCBI

Chst12
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	19,224,545 - 19,243,012 (-)	NCBI		GRCr8
mRatBN7.2	12	14,110,631 - 14,129,099 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	14,110,393 - 14,129,057 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	12	14,919,833 - 14,921,444 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	15,543,336 - 15,544,947 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	14,570,041 - 14,571,652 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	16,199,975 - 16,218,404 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	16,200,019 - 16,201,632 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	12	18,193,299 - 18,211,432 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	12	14,577,440 - 14,579,051 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	12	14,607,640 - 14,608,900 (-)	NCBI
Celera	12	15,869,923 - 15,871,534 (-)	NCBI		Celera
Cytogenetic Map	12	q11	NCBI

Chst12
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955460	12,847,440 - 12,875,614 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955460	12,847,440 - 12,875,614 (-)	NCBI	ChiLan1.0	ChiLan1.0

CHST12
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	14,702,493 - 14,713,440 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	14,705,427 - 14,706,686 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	16,165,669 - 16,188,970 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	14,829,257 - 14,852,752 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	14,831,071 - 14,868,301 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	14,632,993 - 14,656,290 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	14,561,363 - 14,584,672 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	14,849,398 - 14,870,888 (-)	NCBI		UU_Cfam_GSD_1.0

Chst12
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	142,840,101 - 142,863,581 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936823	187,957 - 209,176 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936823	187,920 - 210,818 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CHST12
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	1,720,906 - 1,743,287 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	1,721,047 - 1,743,080 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	2,285,216 - 2,286,666 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CHST12
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	28	19,174,283 - 19,200,564 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	28	19,174,502 - 19,175,746 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666090	2,545,794 - 2,575,355 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Chst12
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624740	30,499,724 - 30,519,740 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624740	30,499,718 - 30,519,745 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003819741	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_003819742	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008973154	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008973155	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034963532	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034963533	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSPPAT00000008913 ⟹ ENSPPAP00000001792

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	7	2,792,210 - 2,793,454 (+)	Ensembl

RefSeq Acc Id:

XM_003819741 ⟹ XP_003819789

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	6	7,362,580 - 7,393,279 (+)	NCBI
NHGRI_mPanPan1	7	55,687,282 - 55,717,973 (+)	NCBI
Mhudiblu_PPA_v0	7	2,666,116 - 2,697,292 (+)	NCBI
PanPan1.1	7	2,763,712 - 2,794,147 (+)	NCBI

Sequence:

show sequence

CGCGGGGCGGCGGCGGCGGCTGCGGGCGCGAGGTTCCCAGCAGGATGCCCCGGCTCTGCAGGAA
GCTGAAGTGAGAGGCCCGGAGAGGGCCCAGCCCGCCCGGGGCAGGATGACCAAGGCCCGGCTGT
TCCGGCTGTGGCTGGTGCTGGGGTCGGTGTTCATGATCCTGCTGATCATCGTGTACTGGGACAG
CGCAGGCGCCGCGCACTTCTACTTGCACACGTCCTTCTCTAGGCCGCACACGGGGCCGCCGCTG
CCCACGCCCGGGCTGGACAGGGACAGGGAGCTCACGGCCGACTCCGATGTCGACGAGTTTCTGG
ACAAGTTTCTCAGTGCTGGCGTGAAGCAGAGCGACCTTCCCAGAAAGGAGACGGAGCAGCCGCC
TGCGCCGGGGAGCATGGAGGAGAGCGTGAGAGGCTACGACTGGTCCCCGCGCGACGCCCGGCGC
AGCCCCGACCAGGGCCGGCAGCAGGCGGAGCGGAGGAGCGTGCTGCGGGGCTTCTGCGCCAACT
CCAGCCTGGCCTTCCCCACCAAGGAGCGCGCATTCGACGACATCCCCAACTCGGAGCTGAGCCA
CCTGATCGTGGACGACCGGCACGGGGCCATCTACTGCTACGTGCCCAAGGTGGCCTGCACCAAC
TGGAAGCGCGTGATGATCGTGCTGAGCGGAAGCCTGCTGCACCGCGGTGCGCCCTACCGCGACC
CGCTGCGCATCCCGCGCGAGCACGTGCACAACGCCAGCGCGCACCTGACCTTCAACAAGTTCTG
GCGCCGCTACGGGAAGCTCTCCCGCCACCTCATGAAGGTCAAGCTCAAGAAGTACACCAAGTTC
CTCTTCGTGCGCGACCCCTTCGTGCGCCTGATCTCCGCCTTCCGCAGCAAGTTCGAGCTGGAGA
ACGAGGAGTTCTACCGCAAGTTCGCCGTGCCCATGCTGCGGCTGTACGCCAACCACACCAGCCT
GCCCGCCTCGGCGCGCGAGGCCTTCCGCGCTGGCCTCAAGGTGTCCTTCGCCAACTTCATCCAG
TACCTGCTGGACCCGCACACGGAGAAGCTGGCGCCCTTCAACGAGCACTGGCGGCAGGTGTACC
GCCTCTGCCACCCGTGCCAGATCGACTACGACTTCGTGGGGAAGCTGGAGACTCTGGACGAGGA
TGCCGCGCAGCTGCTGCAGCTGCTCCAGGTGGACCGGCAGCTCCGCTTCCCCCCGAGCTACCGG
AACAGGACCGCCAGCAGCTGGGAGGAGGACTGGTTCGCCAAGATCCCCCTGGCCTGGAGGCAGC
AGCTGTATAAACTCTACGAGGCCGACTTTGTTCTCTTCGGCTACCCCAAGCCGGAAAACCTCCT
CCGAGACTGAAAGCTTTCGCGTTGCTTTTTCTCGCGTGCCTGGAACCTGCCGCACGCGCACTCT
AGTTTTTTTATGACCTACGATTTTGCAATCTGGGCTTCTTGTTTACTCCACTGCCTCTATCCAT
TGAGTACTGTATCGATATTGTTTTTTAAGATTAATATATTTCACATATTTAATACGAAACGTGG
AAGGGAATGCTGGAGTAAAATCCCCCCTCCCCTCTCCCCTCCGCTCACCCGCTCGCCCGCTCAC
CCGTTCCTGTGGTTTTTCTGAGCGTGCGGGCGCCGGGAGGGGATGCTGAGGCTGATGGAGCTGC
CTCCAGGGCTCGGGCCACTCACCGGAGGAGGGCGGGGCCTGCACTTGAAGTCTGGCCGCACCTG
TCTGTTTTTGGAAGGGTAGCCGACAAATCCTTCCAGAGGGAAAGTTCTTTGTTTAAGTGTTGTA
CTTGAAAAGGTCAATCTTCAGGGCTTCCTGTTTGAAGTCAAGTCAGAGGTAAACCGGTCAGTTA
CAGAAGCAGGATTTCTAGGATTTCTAACTCCAGCTGTTCCCATACTGTCTAGTTTAAATTATGG
CTGTTAAGGCCGGGCGGGTGACTCAGGCAGGTAATCCCAGAACTTTGGGAGGCCCAGACAGAAG
GATCGCTTGAGGTCAGGAATTTGAGACCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAAA

hide sequence

RefSeq Acc Id:

XM_003819742 ⟹ XP_003819790

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	6	7,362,652 - 7,393,279 (+)	NCBI
NHGRI_mPanPan1	7	55,687,354 - 55,717,973 (+)	NCBI
Mhudiblu_PPA_v0	7	2,666,171 - 2,697,292 (+)	NCBI
PanPan1.1	7	2,763,706 - 2,794,147 (+)	NCBI

Sequence:

show sequence

GCTAGTCGCGGGGCGGCGGCGGCGGCTGCGGGCGCGAGGTGAGGGCCGCGAGGTGAGGGGCGCG
ACGTTCCCAGCAGGATGCCCCGGCTCTGCAGGAAGCTGAAGTGAGAGGCCCGGAGAGGGCCCAG
CCCGCCCGGGGCAGGATGACCAAGGCCCGGCTGTTCCGGCTGTGGCTGGTGCTGGGGTCGGTGT
TCATGATCCTGCTGATCATCGTGTACTGGGACAGCGCAGGCGCCGCGCACTTCTACTTGCACAC
GTCCTTCTCTAGGCCGCACACGGGGCCGCCGCTGCCCACGCCCGGGCTGGACAGGGACAGGGAG
CTCACGGCCGACTCCGATGTCGACGAGTTTCTGGACAAGTTTCTCAGTGCTGGCGTGAAGCAGA
GCGACCTTCCCAGAAAGGAGACGGAGCAGCCGCCTGCGCCGGGGAGCATGGAGGAGAGCGTGAG
AGGCTACGACTGGTCCCCGCGCGACGCCCGGCGCAGCCCCGACCAGGGCCGGCAGCAGGCGGAG
CGGAGGAGCGTGCTGCGGGGCTTCTGCGCCAACTCCAGCCTGGCCTTCCCCACCAAGGAGCGCG
CATTCGACGACATCCCCAACTCGGAGCTGAGCCACCTGATCGTGGACGACCGGCACGGGGCCAT
CTACTGCTACGTGCCCAAGGTGGCCTGCACCAACTGGAAGCGCGTGATGATCGTGCTGAGCGGA
AGCCTGCTGCACCGCGGTGCGCCCTACCGCGACCCGCTGCGCATCCCGCGCGAGCACGTGCACA
ACGCCAGCGCGCACCTGACCTTCAACAAGTTCTGGCGCCGCTACGGGAAGCTCTCCCGCCACCT
CATGAAGGTCAAGCTCAAGAAGTACACCAAGTTCCTCTTCGTGCGCGACCCCTTCGTGCGCCTG
ATCTCCGCCTTCCGCAGCAAGTTCGAGCTGGAGAACGAGGAGTTCTACCGCAAGTTCGCCGTGC
CCATGCTGCGGCTGTACGCCAACCACACCAGCCTGCCCGCCTCGGCGCGCGAGGCCTTCCGCGC
TGGCCTCAAGGTGTCCTTCGCCAACTTCATCCAGTACCTGCTGGACCCGCACACGGAGAAGCTG
GCGCCCTTCAACGAGCACTGGCGGCAGGTGTACCGCCTCTGCCACCCGTGCCAGATCGACTACG
ACTTCGTGGGGAAGCTGGAGACTCTGGACGAGGATGCCGCGCAGCTGCTGCAGCTGCTCCAGGT
GGACCGGCAGCTCCGCTTCCCCCCGAGCTACCGGAACAGGACCGCCAGCAGCTGGGAGGAGGAC
TGGTTCGCCAAGATCCCCCTGGCCTGGAGGCAGCAGCTGTATAAACTCTACGAGGCCGACTTTG
TTCTCTTCGGCTACCCCAAGCCGGAAAACCTCCTCCGAGACTGAAAGCTTTCGCGTTGCTTTTT
CTCGCGTGCCTGGAACCTGCCGCACGCGCACTCTAGTTTTTTTATGACCTACGATTTTGCAATC
TGGGCTTCTTGTTTACTCCACTGCCTCTATCCATTGAGTACTGTATCGATATTGTTTTTTAAGA
TTAATATATTTCACATATTTAATACGAAACGTGGAAGGGAATGCTGGAGTAAAATCCCCCCTCC
CCTCTCCCCTCCGCTCACCCGCTCGCCCGCTCACCCGTTCCTGTGGTTTTTCTGAGCGTGCGGG
CGCCGGGAGGGGATGCTGAGGCTGATGGAGCTGCCTCCAGGGCTCGGGCCACTCACCGGAGGAG
GGCGGGGCCTGCACTTGAAGTCTGGCCGCACCTGTCTGTTTTTGGAAGGGTAGCCGACAAATCC
TTCCAGAGGGAAAGTTCTTTGTTTAAGTGTTGTACTTGAAAAGGTCAATCTTCAGGGCTTCCTG
TTTGAAGTCAAGTCAGAGGTAAACCGGTCAGTTACAGAAGCAGGATTTCTAGGATTTCTAACTC
CAGCTGTTCCCATACTGTCTAGTTTAAATTATGGCTGTTAAGGCCGGGCGGGTGACTCAGGCAG
GTAATCCCAGAACTTTGGGAGGCCCAGACAGAAGGATCGCTTGAGGTCAGGAATTTGAGACCTG
GCCAACATGGTGAAACCCTGTCTCTACTAAAAA

hide sequence

RefSeq Acc Id:

XM_008973154 ⟹ XP_008971402

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	6	7,362,652 - 7,393,279 (+)	NCBI
NHGRI_mPanPan1	7	55,687,354 - 55,717,973 (+)	NCBI
Mhudiblu_PPA_v0	7	2,666,114 - 2,697,292 (+)	NCBI
PanPan1.1	7	2,763,706 - 2,794,147 (+)	NCBI

Sequence:

show sequence

GCTAGTCGCGGGGCGGCGGCGGCGGCTGCGGGCGCGAGGTGAGGGCCGCGAGGTTCCCAGCAGG
ATGCCCCGGCTCTGCAGGAAGCTGAAGTGAGAGGCCCGGAGAGGGCCCAGCCCGCCCGGGGCAG
GATGACCAAGGCCCGGCTGTTCCGGCTGTGGCTGGTGCTGGGGTCGGTGTTCATGATCCTGCTG
ATCATCGTGTACTGGGACAGCGCAGGCGCCGCGCACTTCTACTTGCACACGTCCTTCTCTAGGC
CGCACACGGGGCCGCCGCTGCCCACGCCCGGGCTGGACAGGGACAGGGAGCTCACGGCCGACTC
CGATGTCGACGAGTTTCTGGACAAGTTTCTCAGTGCTGGCGTGAAGCAGAGCGACCTTCCCAGA
AAGGAGACGGAGCAGCCGCCTGCGCCGGGGAGCATGGAGGAGAGCGTGAGAGGCTACGACTGGT
CCCCGCGCGACGCCCGGCGCAGCCCCGACCAGGGCCGGCAGCAGGCGGAGCGGAGGAGCGTGCT
GCGGGGCTTCTGCGCCAACTCCAGCCTGGCCTTCCCCACCAAGGAGCGCGCATTCGACGACATC
CCCAACTCGGAGCTGAGCCACCTGATCGTGGACGACCGGCACGGGGCCATCTACTGCTACGTGC
CCAAGGTGGCCTGCACCAACTGGAAGCGCGTGATGATCGTGCTGAGCGGAAGCCTGCTGCACCG
CGGTGCGCCCTACCGCGACCCGCTGCGCATCCCGCGCGAGCACGTGCACAACGCCAGCGCGCAC
CTGACCTTCAACAAGTTCTGGCGCCGCTACGGGAAGCTCTCCCGCCACCTCATGAAGGTCAAGC
TCAAGAAGTACACCAAGTTCCTCTTCGTGCGCGACCCCTTCGTGCGCCTGATCTCCGCCTTCCG
CAGCAAGTTCGAGCTGGAGAACGAGGAGTTCTACCGCAAGTTCGCCGTGCCCATGCTGCGGCTG
TACGCCAACCACACCAGCCTGCCCGCCTCGGCGCGCGAGGCCTTCCGCGCTGGCCTCAAGGTGT
CCTTCGCCAACTTCATCCAGTACCTGCTGGACCCGCACACGGAGAAGCTGGCGCCCTTCAACGA
GCACTGGCGGCAGGTGTACCGCCTCTGCCACCCGTGCCAGATCGACTACGACTTCGTGGGGAAG
CTGGAGACTCTGGACGAGGATGCCGCGCAGCTGCTGCAGCTGCTCCAGGTGGACCGGCAGCTCC
GCTTCCCCCCGAGCTACCGGAACAGGACCGCCAGCAGCTGGGAGGAGGACTGGTTCGCCAAGAT
CCCCCTGGCCTGGAGGCAGCAGCTGTATAAACTCTACGAGGCCGACTTTGTTCTCTTCGGCTAC
CCCAAGCCGGAAAACCTCCTCCGAGACTGAAAGCTTTCGCGTTGCTTTTTCTCGCGTGCCTGGA
ACCTGCCGCACGCGCACTCTAGTTTTTTTATGACCTACGATTTTGCAATCTGGGCTTCTTGTTT
ACTCCACTGCCTCTATCCATTGAGTACTGTATCGATATTGTTTTTTAAGATTAATATATTTCAC
ATATTTAATACGAAACGTGGAAGGGAATGCTGGAGTAAAATCCCCCCTCCCCTCTCCCCTCCGC
TCACCCGCTCGCCCGCTCACCCGTTCCTGTGGTTTTTCTGAGCGTGCGGGCGCCGGGAGGGGAT
GCTGAGGCTGATGGAGCTGCCTCCAGGGCTCGGGCCACTCACCGGAGGAGGGCGGGGCCTGCAC
TTGAAGTCTGGCCGCACCTGTCTGTTTTTGGAAGGGTAGCCGACAAATCCTTCCAGAGGGAAAG
TTCTTTGTTTAAGTGTTGTACTTGAAAAGGTCAATCTTCAGGGCTTCCTGTTTGAAGTCAAGTC
AGAGGTAAACCGGTCAGTTACAGAAGCAGGATTTCTAGGATTTCTAACTCCAGCTGTTCCCATA
CTGTCTAGTTTAAATTATGGCTGTTAAGGCCGGGCGGGTGACTCAGGCAGGTAATCCCAGAACT
TTGGGAGGCCCAGACAGAAGGATCGCTTGAGGTCAGGAATTTGAGACCTGGCCAACATGGTGAA
ACCCTGTCTCTACTAAAAA

hide sequence

RefSeq Acc Id:

XM_008973155 ⟹ XP_008971403

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	6	7,362,999 - 7,393,279 (+)	NCBI
NHGRI_mPanPan1	7	55,687,539 - 55,717,973 (+)	NCBI
Mhudiblu_PPA_v0	7	2,666,488 - 2,697,292 (+)	NCBI
PanPan1.1	7	2,764,144 - 2,794,147 (+)	NCBI

Sequence:

show sequence

CTGCCGCCCGGCAGGGGTAGGACCAATTCCCGGGCTTGGAGTTCCAGGATCCCCAGCTCCCGAG
GGCCCCCGTGTGCCTGCTGTCACCTGAACGGGGCTCCCCGGCCCCGCCGACCGCAGCCCTGGAG
CCTGCAGACGCCAGCAGCACCGGCAGGTTCCCAGCAGGATGCCCCGGCTCTGCAGGAAGCTGAA
GTGAGAGGCCCGGAGAGGGCCCAGCCCGCCCGGGGCAGGATGACCAAGGCCCGGCTGTTCCGGC
TGTGGCTGGTGCTGGGGTCGGTGTTCATGATCCTGCTGATCATCGTGTACTGGGACAGCGCAGG
CGCCGCGCACTTCTACTTGCACACGTCCTTCTCTAGGCCGCACACGGGGCCGCCGCTGCCCACG
CCCGGGCTGGACAGGGACAGGGAGCTCACGGCCGACTCCGATGTCGACGAGTTTCTGGACAAGT
TTCTCAGTGCTGGCGTGAAGCAGAGCGACCTTCCCAGAAAGGAGACGGAGCAGCCGCCTGCGCC
GGGGAGCATGGAGGAGAGCGTGAGAGGCTACGACTGGTCCCCGCGCGACGCCCGGCGCAGCCCC
GACCAGGGCCGGCAGCAGGCGGAGCGGAGGAGCGTGCTGCGGGGCTTCTGCGCCAACTCCAGCC
TGGCCTTCCCCACCAAGGAGCGCGCATTCGACGACATCCCCAACTCGGAGCTGAGCCACCTGAT
CGTGGACGACCGGCACGGGGCCATCTACTGCTACGTGCCCAAGGTGGCCTGCACCAACTGGAAG
CGCGTGATGATCGTGCTGAGCGGAAGCCTGCTGCACCGCGGTGCGCCCTACCGCGACCCGCTGC
GCATCCCGCGCGAGCACGTGCACAACGCCAGCGCGCACCTGACCTTCAACAAGTTCTGGCGCCG
CTACGGGAAGCTCTCCCGCCACCTCATGAAGGTCAAGCTCAAGAAGTACACCAAGTTCCTCTTC
GTGCGCGACCCCTTCGTGCGCCTGATCTCCGCCTTCCGCAGCAAGTTCGAGCTGGAGAACGAGG
AGTTCTACCGCAAGTTCGCCGTGCCCATGCTGCGGCTGTACGCCAACCACACCAGCCTGCCCGC
CTCGGCGCGCGAGGCCTTCCGCGCTGGCCTCAAGGTGTCCTTCGCCAACTTCATCCAGTACCTG
CTGGACCCGCACACGGAGAAGCTGGCGCCCTTCAACGAGCACTGGCGGCAGGTGTACCGCCTCT
GCCACCCGTGCCAGATCGACTACGACTTCGTGGGGAAGCTGGAGACTCTGGACGAGGATGCCGC
GCAGCTGCTGCAGCTGCTCCAGGTGGACCGGCAGCTCCGCTTCCCCCCGAGCTACCGGAACAGG
ACCGCCAGCAGCTGGGAGGAGGACTGGTTCGCCAAGATCCCCCTGGCCTGGAGGCAGCAGCTGT
ATAAACTCTACGAGGCCGACTTTGTTCTCTTCGGCTACCCCAAGCCGGAAAACCTCCTCCGAGA
CTGAAAGCTTTCGCGTTGCTTTTTCTCGCGTGCCTGGAACCTGCCGCACGCGCACTCTAGTTTT
TTTATGACCTACGATTTTGCAATCTGGGCTTCTTGTTTACTCCACTGCCTCTATCCATTGAGTA
CTGTATCGATATTGTTTTTTAAGATTAATATATTTCACATATTTAATACGAAACGTGGAAGGGA
ATGCTGGAGTAAAATCCCCCCTCCCCTCTCCCCTCCGCTCACCCGCTCGCCCGCTCACCCGTTC
CTGTGGTTTTTCTGAGCGTGCGGGCGCCGGGAGGGGATGCTGAGGCTGATGGAGCTGCCTCCAG
GGCTCGGGCCACTCACCGGAGGAGGGCGGGGCCTGCACTTGAAGTCTGGCCGCACCTGTCTGTT
TTTGGAAGGGTAGCCGACAAATCCTTCCAGAGGGAAAGTTCTTTGTTTAAGTGTTGTACTTGAA
AAGGTCAATCTTCAGGGCTTCCTGTTTGAAGTCAAGTCAGAGGTAAACCGGTCAGTTACAGAAG
CAGGATTTCTAGGATTTCTAACTCCAGCTGTTCCCATACTGTCTAGTTTAAATTATGGCTGTTA
AGGCCGGGCGGGTGACTCAGGCAGGTAATCCCAGAACTTTGGGAGGCCCAGACAGAAGGATCGC
TTGAGGTCAGGAATTTGAGACCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAAA

hide sequence

RefSeq Acc Id:

XM_034963532 ⟹ XP_034819423

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	6	7,362,530 - 7,393,279 (+)	NCBI
NHGRI_mPanPan1	7	55,687,252 - 55,721,069 (+)	NCBI
Mhudiblu_PPA_v0	7	2,666,062 - 2,697,292 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_003819789	(Get FASTA)	NCBI Sequence Viewer
	XP_003819790	(Get FASTA)	NCBI Sequence Viewer
	XP_008971402	(Get FASTA)	NCBI Sequence Viewer
	XP_008971403	(Get FASTA)	NCBI Sequence Viewer
	XP_034819423	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000001792
	ENSPPAP00000001792.1

RefSeq Acc Id:	XP_003819790 ⟸ XM_003819742
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R8ZAC1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTKARLFRLWLVLGSVFMILLIIVYWDSAGAAHFYLHTSFSRPHTGPPLPTPGLDRDRELTADS DVDEFLDKFLSAGVKQSDLPRKETEQPPAPGSMEESVRGYDWSPRDARRSPDQGRQQAERRSVL RGFCANSSLAFPTKERAFDDIPNSELSHLIVDDRHGAIYCYVPKVACTNWKRVMIVLSGSLLHR GAPYRDPLRIPREHVHNASAHLTFNKFWRRYGKLSRHLMKVKLKKYTKFLFVRDPFVRLISAFR SKFELENEEFYRKFAVPMLRLYANHTSLPASAREAFRAGLKVSFANFIQYLLDPHTEKLAPFNE HWRQVYRLCHPCQIDYDFVGKLETLDEDAAQLLQLLQVDRQLRFPPSYRNRTASSWEEDWFAKI PLAWRQQLYKLYEADFVLFGYPKPENLLRD hide sequence

RefSeq Acc Id:	XP_008971402 ⟸ XM_008973154
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R8ZAC1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTKARLFRLWLVLGSVFMILLIIVYWDSAGAAHFYLHTSFSRPHTGPPLPTPGLDRDRELTADS DVDEFLDKFLSAGVKQSDLPRKETEQPPAPGSMEESVRGYDWSPRDARRSPDQGRQQAERRSVL RGFCANSSLAFPTKERAFDDIPNSELSHLIVDDRHGAIYCYVPKVACTNWKRVMIVLSGSLLHR GAPYRDPLRIPREHVHNASAHLTFNKFWRRYGKLSRHLMKVKLKKYTKFLFVRDPFVRLISAFR SKFELENEEFYRKFAVPMLRLYANHTSLPASAREAFRAGLKVSFANFIQYLLDPHTEKLAPFNE HWRQVYRLCHPCQIDYDFVGKLETLDEDAAQLLQLLQVDRQLRFPPSYRNRTASSWEEDWFAKI PLAWRQQLYKLYEADFVLFGYPKPENLLRD hide sequence

RefSeq Acc Id:	XP_003819789 ⟸ XM_003819741
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R8ZAC1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTKARLFRLWLVLGSVFMILLIIVYWDSAGAAHFYLHTSFSRPHTGPPLPTPGLDRDRELTADS DVDEFLDKFLSAGVKQSDLPRKETEQPPAPGSMEESVRGYDWSPRDARRSPDQGRQQAERRSVL RGFCANSSLAFPTKERAFDDIPNSELSHLIVDDRHGAIYCYVPKVACTNWKRVMIVLSGSLLHR GAPYRDPLRIPREHVHNASAHLTFNKFWRRYGKLSRHLMKVKLKKYTKFLFVRDPFVRLISAFR SKFELENEEFYRKFAVPMLRLYANHTSLPASAREAFRAGLKVSFANFIQYLLDPHTEKLAPFNE HWRQVYRLCHPCQIDYDFVGKLETLDEDAAQLLQLLQVDRQLRFPPSYRNRTASSWEEDWFAKI PLAWRQQLYKLYEADFVLFGYPKPENLLRD hide sequence

RefSeq Acc Id:	XP_008971403 ⟸ XM_008973155
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R8ZAC1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTKARLFRLWLVLGSVFMILLIIVYWDSAGAAHFYLHTSFSRPHTGPPLPTPGLDRDRELTADS DVDEFLDKFLSAGVKQSDLPRKETEQPPAPGSMEESVRGYDWSPRDARRSPDQGRQQAERRSVL RGFCANSSLAFPTKERAFDDIPNSELSHLIVDDRHGAIYCYVPKVACTNWKRVMIVLSGSLLHR GAPYRDPLRIPREHVHNASAHLTFNKFWRRYGKLSRHLMKVKLKKYTKFLFVRDPFVRLISAFR SKFELENEEFYRKFAVPMLRLYANHTSLPASAREAFRAGLKVSFANFIQYLLDPHTEKLAPFNE HWRQVYRLCHPCQIDYDFVGKLETLDEDAAQLLQLLQVDRQLRFPPSYRNRTASSWEEDWFAKI PLAWRQQLYKLYEADFVLFGYPKPENLLRD hide sequence

RefSeq Acc Id:	XP_034819423 ⟸ XM_034963532
- Peptide Label:	isoform X1

Ensembl Acc Id:

ENSPPAP00000001792 ⟸ ENSPPAT00000008913

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000008280	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000008913.1	UniProtKB/TrEMBL
InterPro	Carb_sulfotrans_8-10	UniProtKB/TrEMBL
	Sulfotransferase	UniProtKB/TrEMBL
KEGG Report	pps:100977359	UniProtKB/TrEMBL
NCBI Gene	CHST12	ENTREZGENE
PANTHER	CARBOHYDRATE SULFOTRANSFERASE 12	UniProtKB/TrEMBL
	PTHR12137	UniProtKB/TrEMBL
Pfam	Sulfotransfer_2	UniProtKB/TrEMBL
UniProt	A0A2R8ZAC1	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD