LOC100989931 (acyl carrier protein, mitochondrial) - Rat Genome Database

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Gene: LOC100989931 (acyl carrier protein, mitochondrial) Pan paniscus
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Symbol: LOC100989931 (Ensembl: NDUFAB1)
Name: acyl carrier protein, mitochondrial (Ensembl:NADH:ubiquinone oxidoreductase subunit AB1)
RGD ID: 12040743
Description: ENCODES a protein that exhibits acyl binding (inferred); acyl carrier activity (inferred); mitochondrial large ribosomal subunit binding (inferred); INVOLVED IN [2Fe-2S] cluster assembly (inferred); fatty acid biosynthetic process (inferred); mitochondrial respiratory chain complex I assembly (inferred); FOUND IN mitochondrial [2Fe-2S] assembly complex (inferred); mitochondrial inner membrane (inferred); mitochondrion (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa pseudogene
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22170,966,398 - 170,967,104 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13170,971,122 - 170,971,821 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03170,136,429 - 170,137,102 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13178,315,075 - 178,315,736 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1623,833,485 - 23,849,085 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_008957317 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSPPAT00000007340   ⟹   ENSPPAP00000001499
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1623,833,485 - 23,849,085 (-)Ensembl
RefSeq Acc Id: XM_008957317   ⟹   XP_008955565
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22170,966,398 - 170,967,104 (+)NCBI
NHGRI_mPanPan13170,971,122 - 170,971,821 (+)NCBI
Mhudiblu_PPA_v03170,136,429 - 170,137,102 (+)NCBI
PanPan1.13178,315,075 - 178,315,736 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_008955565 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000001499.1
RefSeq Acc Id: XP_008955565   ⟸   XM_008957317
- UniProtKB: A0A2R8Z949 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSPPAP00000001499   ⟸   ENSPPAT00000007340
Protein Domains
Carrier


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000006763 Ensembl, UniProtKB/TrEMBL
  ENSPPAG00000012887 ENTREZGENE
Ensembl Transcript ENSPPAT00000007340.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.1200.10 UniProtKB/TrEMBL
InterPro ACP-like_sf UniProtKB/TrEMBL
  Acyl_carrier UniProtKB/TrEMBL
  PP-bd_ACP UniProtKB/TrEMBL
  Ppantetheine_attach_site UniProtKB/TrEMBL
KEGG Report pps:100989931 UniProtKB/TrEMBL
  pps:100995502 UniProtKB/TrEMBL
NCBI Gene LOC100989931 ENTREZGENE
PANTHER ACYL CARRIER PROTEIN, MITOCHONDRIAL UniProtKB/TrEMBL
  PTHR20863 UniProtKB/TrEMBL
Pfam PP-binding UniProtKB/TrEMBL
PROSITE CARRIER UniProtKB/TrEMBL
  PHOSPHOPANTETHEINE UniProtKB/TrEMBL
Superfamily-SCOP SSF47336 UniProtKB/TrEMBL
UniProt A0A2R8Z949 ENTREZGENE, UniProtKB/TrEMBL