PLP1 (proteolipid protein 1) - Rat Genome Database

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Gene: PLP1 (proteolipid protein 1) Pan paniscus
Analyze
Symbol: PLP1
Name: proteolipid protein 1
RGD ID: 11722735
Description: ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); structural constituent of myelin sheath (ortholog); INVOLVED IN AMPA selective glutamate receptor signaling pathway (ortholog); astrocyte development (ortholog); axon development (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal recessive nonsyndromic deafness 9 (ortholog); Chronic Relapsing Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN integrin alphav-beta3 complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X103,397,682 - 103,413,776 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X103,401,283 - 103,417,377 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X93,015,098 - 93,031,193 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X103,353,181 - 103,412,513 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX103,353,184 - 103,412,513 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
PLP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X103,397,682 - 103,413,776 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X103,401,283 - 103,417,377 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X93,015,098 - 93,031,193 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X103,353,181 - 103,412,513 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX103,353,184 - 103,412,513 (+)Ensemblpanpan1.1panPan2
PLP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X103,776,506 - 103,792,619 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX103,773,718 - 103,792,619 (+)EnsemblGRCh38hg38GRCh38
GRCh37X103,031,434 - 103,047,548 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X102,918,410 - 102,934,204 (+)NCBINCBI36Build 36hg18NCBI36
Build 34X102,837,898 - 102,853,690NCBI
CeleraX103,470,449 - 103,486,558 (+)NCBICelera
Cytogenetic MapXq22.2NCBI
HuRefX92,687,547 - 92,703,609 (+)NCBIHuRef
CHM1_1X102,924,426 - 102,940,535 (+)NCBICHM1_1
T2T-CHM13v2.0X102,223,463 - 102,239,585 (+)NCBIT2T-CHM13v2.0
Plp1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X135,720,897 - 135,739,331 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX135,723,420 - 135,740,482 (+)EnsemblGRCm39 Ensembl
GRCm38X136,820,148 - 136,838,582 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX136,822,671 - 136,839,733 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X133,357,375 - 133,372,282 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X132,169,200 - 132,184,107 (+)NCBIMGSCv36mm8
CeleraX120,104,727 - 120,119,592 (+)NCBICelera
Cytogenetic MapXF1NCBI
cM MapX59.1NCBI
Plp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X104,933,921 - 104,993,317 (+)NCBIGRCr8
mRatBN7.2X100,184,039 - 100,201,035 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX100,185,767 - 100,201,032 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX102,315,950 - 102,331,220 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X105,814,627 - 105,829,894 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X103,383,798 - 103,399,065 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X107,494,326 - 107,511,355 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX107,496,072 - 107,511,348 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X107,379,831 - 107,394,881 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X124,488,627 - 124,503,639 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X124,562,059 - 124,577,072 (+)NCBI
CeleraX101,020,110 - 101,035,276 (+)NCBICelera
Cytogenetic MapXq32NCBI
Plp1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955548781,015 - 797,935 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955548781,522 - 797,246 (+)NCBIChiLan1.0ChiLan1.0
PLP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X77,191,112 - 77,207,772 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX77,191,150 - 77,205,964 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX63,420,093 - 63,434,914 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X78,808,649 - 78,825,317 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX78,808,262 - 78,825,306 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X76,287,255 - 76,302,076 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X77,974,000 - 77,988,806 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X77,741,107 - 77,755,923 (+)NCBIUU_Cfam_GSD_1.0
Plp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X77,107,149 - 77,123,012 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649910,534,950 - 10,551,012 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649910,534,953 - 10,553,411 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PLP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX84,666,733 - 84,685,058 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X84,676,627 - 84,683,517 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X98,648,731 - 98,655,621 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PLP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X91,671,535 - 91,687,693 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX91,671,878 - 91,687,878 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606516,533,357 - 16,552,347 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Plp1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624954133,105 - 150,953 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624954135,065 - 150,911 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000024093   ⟹   ENSPPAP00000005290
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 EnsemblX103,353,184 - 103,412,513 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000024140   ⟹   ENSPPAP00000005305
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 EnsemblX103,405,433 - 103,410,495 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000024159   ⟹   ENSPPAP00000005308
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 EnsemblX103,405,433 - 103,410,467 (+)Ensembl
RefSeq Acc Id: XM_034950207   ⟹   XP_034806098
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2X103,397,682 - 103,413,776 (+)NCBI
NHGRI_mPanPan1X103,401,283 - 103,417,377 (+)NCBI
Mhudiblu_PPA_v0X93,015,098 - 93,031,193 (+)NCBI
RefSeq Acc Id: XM_034950208   ⟹   XP_034806099
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2X103,397,682 - 103,413,776 (+)NCBI
NHGRI_mPanPan1X103,401,283 - 103,417,377 (+)NCBI
Mhudiblu_PPA_v0X93,015,441 - 93,031,193 (+)NCBI
Protein Sequences
Protein RefSeqs XP_034806098 (Get FASTA)   NCBI Sequence Viewer  
  XP_034806099 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000005290.1
  ENSPPAP00000005305.1
  ENSPPAP00000005308.1
Reference Protein Sequences
RefSeq Acc Id: XP_034806098   ⟸   XM_034950207
- Peptide Label: isoform X1
- UniProtKB: A0A2R8ZMV4 (UniProtKB/TrEMBL),   A0A2R8ZMW8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034806099   ⟸   XM_034950208
- Peptide Label: isoform X2
- UniProtKB: A0A2R8ZMW8 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSPPAP00000005290   ⟸   ENSPPAT00000024093
RefSeq Acc Id: ENSPPAP00000005308   ⟸   ENSPPAT00000024159
RefSeq Acc Id: ENSPPAP00000005305   ⟸   ENSPPAT00000024140


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000021841 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000024093.1 UniProtKB/TrEMBL
  ENSPPAT00000024140.1 UniProtKB/TrEMBL
  ENSPPAT00000024159.1 UniProtKB/TrEMBL
InterPro Myelin_PLP UniProtKB/TrEMBL
  Myelin_PLP_CS UniProtKB/TrEMBL
NCBI Gene PLP1 ENTREZGENE
PANTHER MYELIN PROTEOLIPID PROTEIN UniProtKB/TrEMBL
  PTHR11683 UniProtKB/TrEMBL
Pfam Myelin_PLP UniProtKB/TrEMBL
PRINTS MYELINPLP UniProtKB/TrEMBL
PROSITE MYELIN_PLP_1 UniProtKB/TrEMBL
  MYELIN_PLP_2 UniProtKB/TrEMBL
SMART PLP UniProtKB/TrEMBL
UniProt A0A2R8ZK10_PANPA UniProtKB/TrEMBL
  A0A2R8ZMV4 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R8ZMW8 ENTREZGENE, UniProtKB/TrEMBL