ONTOLOGY REPORT - ANNOTATIONS |
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Term: | regulation of CD4-positive, alpha-beta T cell activation |
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Accession: | GO:2000514
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browse the term
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Definition: | Any process that modulates the frequency, rate or extent of CD4-positive, alpha-beta T cell activation. |
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Ager |
advanced glycosylation end product-specific receptor |
involved_in |
ISO IEA |
(PMID:22473704) GO_REF:0000107 |
RGD Ensembl |
PMID:22473704 |
GO_REF:0000107 |
NCBI chr20:4,148,150...4,151,361
Ensembl chr20:4,147,890...4,151,078
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Cd81 |
Cd81 molecule |
involved_in |
ISO IEA ISS |
(PMID:22307619) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:22307619 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:198,235,861...198,251,660
Ensembl chr 1:198,241,484...198,251,660
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Tnfsf4 |
TNF superfamily member 4 |
involved_in |
ISO |
(MGI:4819294|PMID:20639485) |
RGD |
PMID:20639485 |
MGI:4819294 |
NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788
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Tarm1 |
T cell-interacting, activating receptor on myeloid cells 1 |
involved_in |
ISO |
(PMID:26311901) |
RGD |
PMID:26311901 |
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NCBI chr 1:65,666,742...65,682,402
Ensembl chr 1:65,671,902...65,679,626
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Twsg1 |
twisted gastrulation BMP signaling modulator 1 |
involved_in |
ISO |
(PMID:17164348) |
RGD |
PMID:17164348 |
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NCBI chr 9:105,533,116...105,567,460
Ensembl chr 9:105,533,136...105,567,479
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Cd160 |
CD160 molecule |
involved_in |
ISO |
(PMID:18193050) |
RGD |
PMID:18193050 |
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NCBI chr 2:184,340,820...184,383,421
Ensembl chr 2:184,340,599...184,375,834
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Cbfb |
core-binding factor subunit beta |
involved_in |
ISO |
(MGI:3772948|PMID:18258917) |
RGD |
PMID:18258917 |
MGI:3772948 |
NCBI chr19:33,049,162...33,092,752
Ensembl chr19:33,049,172...33,092,751
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Hmgb1 |
high mobility group box 1 |
involved_in |
ISO |
(PMID:22473704) |
RGD |
PMID:22473704 |
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NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565 Ensembl chr16:5,901,586...5,978,565
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Runx1 |
RUNX family transcription factor 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3772948|PMID:18258917) |
UniProt RGD |
PMID:18258917 |
GO_REF:0000024 MGI:3772948 |
NCBI chr11:31,839,880...32,074,427
Ensembl chr11:31,843,764...32,074,542
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Runx3 |
RUNX family transcription factor 3 |
involved_in |
ISO |
(MGI:3772948|PMID:18258917) |
RGD |
PMID:18258917 |
MGI:3772948 |
NCBI chr 5:147,360,587...147,419,161
Ensembl chr 5:147,360,994...147,419,156
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Arg2 |
arginase 2 |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:5908533|PMID:25009204) |
Ensembl RGD |
PMID:25009204 |
GO_REF:0000107 MGI:5908533 |
NCBI chr 6:97,936,002...97,961,379
Ensembl chr 6:97,936,002...97,961,378
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Cblb |
Cbl proto-oncogene B |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2180572 (PMID:14973438) |
Ensembl RGD |
PMID:14973438 |
GO_REF:0000107 |
NCBI chr11:48,589,878...48,756,940
Ensembl chr11:48,592,703...48,756,839
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Cd274 |
CD274 molecule |
involved_in |
ISO |
(PMID:24691993) |
RGD |
PMID:24691993 |
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NCBI chr 1:227,116,674...227,137,379
Ensembl chr 1:227,116,649...227,134,450
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Cd44 |
CD44 molecule |
involved_in |
ISO |
(MGI:5688819|PMID:25065622) |
RGD |
PMID:25065622 |
MGI:5688819 |
NCBI chr 3:89,155,850...89,244,615
Ensembl chr 3:89,157,058...89,244,620
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Foxp3 |
forkhead box P3 |
acts_upstream_of_or_within |
ISO |
(PMID:17028180) |
RGD |
PMID:17028180 |
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NCBI chr X:14,908,494...14,924,994
Ensembl chr X:14,908,494...14,923,838
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Itch |
itchy E3 ubiquitin protein ligase |
acts_upstream_of_or_within |
ISO |
MGI:1856404 (PMID:14973438) |
RGD |
PMID:14973438 |
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NCBI chr 3:143,642,348...143,733,745
Ensembl chr 3:143,645,637...143,733,543
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Lgals5 |
galectin 5 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr10:63,853,949...63,857,198
Ensembl chr10:63,853,935...63,857,153
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Lgals9 |
galectin 9 |
involved_in |
ISO IBA |
(PMID:20209097) GO_REF:0000033 (MGI:5688819|PMID:25065622) |
RGD GO_Central |
PMID:20209097 PMID:25065622 |
GO_REF:0000033 MGI:5688819 |
NCBI chr10:63,907,018...63,930,224
Ensembl chr10:63,907,018...63,930,045
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Ndfip1 |
Nedd4 family interacting protein 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:3695433 (PMID:17137798) |
Ensembl RGD |
PMID:17137798 |
GO_REF:0000107 |
NCBI chr18:30,265,808...30,316,068
Ensembl chr18:30,250,613...30,322,311
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Tarm1 |
T cell-interacting, activating receptor on myeloid cells 1 |
involved_in |
ISO |
(MGI:5908526|PMID:26311901) |
RGD |
PMID:26311901 |
MGI:5908526 |
NCBI chr 1:65,666,742...65,682,402
Ensembl chr 1:65,671,902...65,679,626
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Tnfrsf14 |
TNF receptor superfamily member 14 |
acts_upstream_of_or_within |
ISO |
(PMID:15568026) |
RGD |
PMID:15568026 |
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NCBI chr 5:165,486,069...165,494,421
Ensembl chr 5:165,484,262...165,493,703
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Twsg1 |
twisted gastrulation BMP signaling modulator 1 |
involved_in |
ISO |
(PMID:17164348) |
RGD |
PMID:17164348 |
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NCBI chr 9:105,533,116...105,567,460
Ensembl chr 9:105,533,136...105,567,479
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Vsir |
V-set immunoregulatory receptor |
involved_in acts_upstream_of_or_within |
ISO |
(PMID:24691993) (PMID:21383057) |
RGD |
PMID:21383057 PMID:24691993 |
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NCBI chr20:28,281,582...28,307,262
Ensembl chr20:28,281,596...28,303,878
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Xcl1 |
X-C motif chemokine ligand 1 |
involved_in |
ISO |
(PMID:10887101) |
RGD |
PMID:10887101 |
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NCBI chr13:77,248,687...77,252,343
Ensembl chr13:77,248,717...77,252,329
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Xcl1 |
X-C motif chemokine ligand 1 |
involved_in |
ISO |
(PMID:10887101) |
RGD |
PMID:10887101 |
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NCBI chr13:77,248,687...77,252,343
Ensembl chr13:77,248,717...77,252,329
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Ascl2 |
achaete-scute family bHLH transcription factor 2 |
involved_in |
ISO |
(MGI:5565031|PMID:24463518) |
RGD |
PMID:24463518 |
MGI:5565031 |
NCBI chr 1:198,148,999...198,151,406
Ensembl chr 1:198,148,999...198,151,406
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Il4r |
interleukin 4 receptor |
acts_upstream_of_or_within |
ISO |
MGI:96109 (PMID:16424184) |
RGD |
PMID:16424184 |
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NCBI chr 1:180,115,061...180,139,981
Ensembl chr 1:180,115,120...180,139,980
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Jak3 |
Janus kinase 3 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3719947|PMID:16020505) |
BHF-UCL RGD |
PMID:16020505 |
GO_REF:0000024 MGI:3719947 |
NCBI chr16:18,386,330...18,398,542
Ensembl chr16:18,386,405...18,398,536
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Tnfsf4 |
TNF superfamily member 4 |
involved_in |
ISO |
(MGI:4942267|PMID:9670042) |
RGD |
PMID:9670042 |
MGI:4942267 |
NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788
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Ascl2 |
achaete-scute family bHLH transcription factor 2 |
involved_in |
ISO |
(MGI:5565031|PMID:24463518) |
RGD |
PMID:24463518 |
MGI:5565031 |
NCBI chr 1:198,148,999...198,151,406
Ensembl chr 1:198,148,999...198,151,406
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Foxp3 |
forkhead box P3 |
involved_in |
ISO |
(PMID:23169781) |
RGD |
PMID:23169781 |
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NCBI chr X:14,908,494...14,924,994
Ensembl chr X:14,908,494...14,923,838
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Il2 |
interleukin 2 |
involved_in |
ISO |
RNAcentral:URS000039ED8D_10090 (MGI:5634593|PMID:25642768) |
RGD |
PMID:25642768 |
MGI:5634593 |
NCBI chr 2:120,004,862...120,009,566
Ensembl chr 2:120,004,862...120,009,566
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Il4 |
interleukin 4 |
acts_upstream_of_or_within |
ISO |
(PMID:18792410) |
RGD |
PMID:18792410 |
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NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
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Pf4 |
platelet factor 4 |
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IDA |
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RGD |
PMID:24986443 |
RGD:329901907 |
NCBI chr14:17,298,304...17,299,220
Ensembl chr14:17,298,308...17,299,365
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Rc3h1 |
ring finger and CCCH-type domains 1 |
involved_in |
ISO |
(MGI:6142401|PMID:25282160) |
RGD |
PMID:25282160 |
MGI:6142401 |
NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839
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Rc3h2 |
ring finger and CCCH-type domains 2 |
involved_in |
ISO |
(MGI:6142401|PMID:25282160) |
RGD |
PMID:25282160 |
MGI:6142401 |
NCBI chr 3:21,121,531...21,186,711
Ensembl chr 3:21,110,679...21,179,933
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Smad7 |
SMAD family member 7 |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:5634593|PMID:25642768) |
Ensembl RGD |
PMID:25642768 |
GO_REF:0000107 MGI:5634593 |
NCBI chr18:68,988,429...69,016,774
Ensembl chr18:68,988,429...69,016,765
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Tbx21 |
T-box transcription factor 21 |
involved_in |
ISO |
(MGI:4868293|PMID:21151104) |
RGD |
PMID:21151104 |
MGI:4868293 |
NCBI chr10:82,082,322...82,098,831
Ensembl chr10:82,082,322...82,098,831
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Zbtb7b |
zinc finger and BTB domain containing 7B |
acts_upstream_of_or_within |
ISO |
MGI:3530739 (PMID:23034280) |
RGD |
PMID:23034280 |
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NCBI chr 2:174,795,831...174,811,980
Ensembl chr 2:174,797,453...174,814,236
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Zc3h12a |
zinc finger CCCH type containing 12A |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:6142401|PMID:25282160) |
UniProt RGD |
PMID:25282160 |
GO_REF:0000024 MGI:6142401 |
NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
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Loxl3 |
lysyl oxidase-like 3 |
involved_in |
ISO |
(MGI:5825383|PMID:28065600) (PMID:28065600) |
RGD |
PMID:28065600 |
MGI:5825383 |
NCBI chr 4:115,540,640...115,556,958
Ensembl chr 4:115,540,685...115,557,466
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Tbx21 |
T-box transcription factor 21 |
involved_in |
ISO |
(MGI:4868293|PMID:21151104) |
RGD |
PMID:21151104 |
MGI:4868293 |
NCBI chr10:82,082,322...82,098,831
Ensembl chr10:82,082,322...82,098,831
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Tnfsf18 |
TNF superfamily member 18 |
involved_in |
ISO |
(MGI:5551556|PMID:24107315) |
RGD |
PMID:24107315 |
MGI:5551556 |
NCBI chr13:73,833,478...73,907,249
Ensembl chr13:73,831,252...73,843,169
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Anxa1 |
annexin A1 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:17008549) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:17008549 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:217,861,175...217,877,205
Ensembl chr 1:217,861,175...217,877,343
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Ascl2 |
achaete-scute family bHLH transcription factor 2 |
involved_in |
ISO |
(MGI:5565031|PMID:24463518) |
RGD |
PMID:24463518 |
MGI:5565031 |
NCBI chr 1:198,148,999...198,151,406
Ensembl chr 1:198,148,999...198,151,406
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Bcl6 |
BCL6, transcription repressor |
acts_upstream_of_or_within |
ISO |
MGI:96559 (PMID:12594267) |
RGD |
PMID:12594267 |
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NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
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Hlx |
H2.0-like homeobox |
acts_upstream_of_or_within |
ISO |
MGI:105367|MGI:2182089 (PMID:16424184) |
RGD |
PMID:16424184 |
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NCBI chr13:96,280,335...96,285,750
Ensembl chr13:96,280,339...96,285,750
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Socs5 |
suppressor of cytokine signaling 5 |
involved_in |
ISO |
(MGI:3687909|PMID:12242343) |
RGD |
PMID:12242343 |
MGI:3687909 |
NCBI chr 6:7,481,039...7,512,644
Ensembl chr 6:7,481,095...7,514,834
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Zfp35 |
zinc finger protein 35 |
involved_in |
IEA |
GO_REF:0000107 |
Ensembl |
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GO_REF:0000107 |
NCBI chr18:15,268,852...15,284,334
Ensembl chr18:15,268,814...15,285,088
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Rc3h1 |
ring finger and CCCH-type domains 1 |
acts_upstream_of_or_within |
ISO |
MGI:3581675 (PMID:15917799) |
RGD |
PMID:15917799 |
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NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839
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Cd55 |
CD55 molecule (Cromer blood group) |
involved_in |
ISO |
(PMID:16818763) |
RGD |
PMID:16818763 |
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NCBI chr13:41,857,242...41,885,966
Ensembl chr13:41,857,395...41,885,831
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RT1-Da |
RT1 class II, locus Da |
involved_in |
ISO |
(PMID:15265931) |
RGD |
PMID:15265931 |
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NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455
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RT1-Db1 |
RT1 class II, locus Db1 |
involved_in |
ISO |
(PMID:15265931) |
RGD |
PMID:15265931 |
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NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
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Tnfsf4 |
TNF superfamily member 4 |
involved_in |
ISO |
(MGI:4819294|PMID:20639485) |
RGD |
PMID:20639485 |
MGI:4819294 |
NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788
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Cd83 |
CD83 molecule |
acts_upstream_of_or_within |
ISO |
MGI:3055293 (PMID:15322158) |
RGD |
PMID:15322158 |
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NCBI chr17:20,887,309...20,907,009
Ensembl chr17:20,887,309...20,907,083
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Foxp3 |
forkhead box P3 |
acts_upstream_of_or_within |
ISO |
(PMID:17028180) |
RGD |
PMID:17028180 |
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NCBI chr X:14,908,494...14,924,994
Ensembl chr X:14,908,494...14,923,838
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Nckap1l |
NCK associated protein 1 like |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3818191|PMID:19015308) |
UniProt RGD |
PMID:19015308 |
GO_REF:0000024 MGI:3818191 |
NCBI chr 7:134,577,470...134,622,928
Ensembl chr 7:134,577,482...134,622,934
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Sash3 |
SAM and SH3 domain containing 3 |
acts_upstream_of_or_within |
ISO |
MGI:3716944 (PMID:16227612) |
RGD |
PMID:16227612 |
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NCBI chr X:127,326,815...127,341,521
Ensembl chr X:127,326,859...127,341,519
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Socs1 |
suppressor of cytokine signaling 1 |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (MGI:6140589|PMID:24880459) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:24880459 |
GO_REF:0000024 GO_REF:0000107 MGI:6140589 |
NCBI chr10:4,882,651...4,884,342
Ensembl chr10:4,882,560...4,884,383
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Tnfsf4 |
TNF superfamily member 4 |
involved_in |
ISO |
(MGI:4819294|PMID:20639485) |
RGD |
PMID:20639485 |
MGI:4819294 |
NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788
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Zbtb7b |
zinc finger and BTB domain containing 7B |
involved_in |
ISO |
(MGI:6140589|PMID:24880459) |
RGD |
PMID:24880459 |
MGI:6140589 |
NCBI chr 2:174,795,831...174,811,980
Ensembl chr 2:174,797,453...174,814,236
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Card11 |
caspase recruitment domain family, member 11 |
acts_upstream_of_or_within |
ISO |
MGI:3039682 (PMID:12867038) |
RGD |
PMID:12867038 |
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NCBI chr12:13,621,140...13,758,115
Ensembl chr12:13,621,087...13,758,112
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Cd24 |
CD24 molecule |
acts_upstream_of_or_within |
ISO |
MGI:2179996 (PMID:15314074), (PMID:8125140) |
RGD |
PMID:8125140 PMID:15314074 |
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NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662
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Cd28 |
Cd28 molecule |
acts_upstream_of_or_within |
ISO |
MGI:1857150 (PMID:14973438), (PMID:8125140), (PMID:9368605) |
RGD |
PMID:8125140 PMID:9368605 PMID:14973438 |
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NCBI chr 9:62,166,324...62,194,674
Ensembl chr 9:62,166,192...62,194,685
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Cd3e |
CD3 epsilon subunit of T-cell receptor complex |
acts_upstream_of_or_within |
ISO |
(PMID:11894097), (PMID:14973438), (PMID:8125140) |
RGD |
PMID:8125140 PMID:11894097 PMID:14973438 |
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NCBI chr 8:45,303,848...45,315,005
Ensembl chr 8:45,303,852...45,315,022
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Cd55 |
CD55 molecule (Cromer blood group) |
involved_in |
ISO |
(PMID:16818763) |
RGD |
PMID:16818763 |
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NCBI chr13:41,857,242...41,885,966
Ensembl chr13:41,857,395...41,885,831
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Cd81 |
Cd81 molecule |
involved_in |
ISO ISS IEA |
(PMID:22307619) GO_REF:0000024 GO_REF:0000107 |
RGD UniProt Ensembl |
PMID:22307619 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:198,235,861...198,251,660
Ensembl chr 1:198,241,484...198,251,660
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Irgm |
immunity-related GTPase M |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3822251|PMID:18806793) |
UniProt RGD |
PMID:18806793 |
GO_REF:0000024 MGI:3822251 |
NCBI chr10:33,233,513...33,241,594
Ensembl chr10:33,233,455...33,241,578
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Lgals9 |
galectin 9 |
involved_in |
ISO |
(PMID:16116184) |
RGD |
PMID:16116184 |
|
NCBI chr10:63,907,018...63,930,224
Ensembl chr10:63,907,018...63,930,045
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|
G |
Prkcq |
protein kinase C, theta |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2664379 (PMID:12867038) |
Ensembl RGD |
PMID:12867038 |
GO_REF:0000107 |
NCBI chr17:67,246,394...67,379,049
Ensembl chr17:67,246,394...67,378,704
|
|
G |
Ripk2 |
receptor-interacting serine-threonine kinase 2 |
acts_upstream_of_or_within |
ISO |
MGI:2446070|MGI:2660793 (PMID:11894097), (PMID:11894098) |
RGD |
PMID:11894097 PMID:11894098 |
|
NCBI chr 5:29,630,806...29,662,804
Ensembl chr 5:29,631,570...29,662,657
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|
G |
Tgfbr2 |
transforming growth factor, beta receptor 2 |
involved_in |
ISO IEA |
(PMID:17164348) GO_REF:0000107 |
RGD Ensembl |
PMID:17164348 |
GO_REF:0000107 |
NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
|
|
G |
Xcl1 |
X-C motif chemokine ligand 1 |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:5009207|PMID:9973465) |
Ensembl RGD |
PMID:9973465 |
GO_REF:0000107 MGI:5009207 |
NCBI chr13:77,248,687...77,252,343
Ensembl chr13:77,248,717...77,252,329
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|
|
G |
Foxp3 |
forkhead box P3 |
acts_upstream_of_or_within |
ISO |
MGI:1857034|MGI:2654936|MGI:3696705 (PMID:12612578), (PMID:16275384), (PMID:16301745), (PMID:18573908) |
RGD |
PMID:12612578 PMID:16275384 PMID:16301745 PMID:18573908 |
|
NCBI chr X:14,908,494...14,924,994
Ensembl chr X:14,908,494...14,923,838
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|
G |
Gimap5 |
GTPase, IMAP family member 5 |
|
IMP |
|
RGD |
PMID:15778366 |
RGD:2303772 |
NCBI chr 4:77,693,417...77,701,025
Ensembl chr 4:77,687,564...77,703,086
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|
G |
Il2rg |
interleukin 2 receptor subunit gamma |
acts_upstream_of_or_within |
ISO |
MGI:1857455 (PMID:16227984) |
RGD |
PMID:16227984 |
|
NCBI chr X:66,395,330...66,399,026
Ensembl chr X:66,392,542...66,399,823
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|
G |
Klhl25 |
kelch-like family member 25 |
involved_in |
ISO ISS |
(PMID:34491895) (MGI:6765767|PMID:34491895) GO_REF:0000024 |
RGD UniProt |
PMID:34491895 |
GO_REF:0000024 MGI:6765767 |
NCBI chr 1:129,724,894...129,750,142
Ensembl chr 1:129,722,026...129,750,227
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|
G |
RT1-Da |
RT1 class II, locus Da |
involved_in |
ISO |
(PMID:28467828) |
RGD |
PMID:28467828 |
|
NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455
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G |
RT1-Db1 |
RT1 class II, locus Db1 |
involved_in |
ISO |
(PMID:28467828) |
RGD |
PMID:28467828 |
|
NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
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|
|
G |
Ifng |
interferon gamma |
involved_in |
ISO |
(PMID:20209097) |
RGD |
PMID:20209097 |
|
NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
|
|
G |
Lgals9 |
galectin 9 |
involved_in |
ISO |
(PMID:20209097) |
RGD |
PMID:20209097 |
|
NCBI chr10:63,907,018...63,930,224
Ensembl chr10:63,907,018...63,930,045
|
|
|
G |
Anxa1 |
annexin A1 |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (PMID:17008549) |
UniProt Ensembl RGD |
PMID:17008549 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:217,861,175...217,877,205
Ensembl chr 1:217,861,175...217,877,343
|
|
G |
Ccl19 |
C-C motif chemokine ligand 19 |
involved_in |
ISO |
(MGI:3576832|PMID:15845453) |
RGD |
PMID:15845453 |
MGI:3576832 |
NCBI chr 5:56,963,364...56,965,308
Ensembl chr 5:56,963,364...56,965,308
|
|
G |
Hlx |
H2.0-like homeobox |
acts_upstream_of_or_within |
ISO |
MGI:105367|MGI:2182089 (PMID:16424184) |
RGD |
PMID:16424184 |
|
NCBI chr13:96,280,335...96,285,750
Ensembl chr13:96,280,339...96,285,750
|
|
G |
Ripk2 |
receptor-interacting serine-threonine kinase 2 |
acts_upstream_of_or_within |
ISO |
MGI:2446070 (PMID:11894097) |
RGD |
PMID:11894097 |
|
NCBI chr 5:29,630,806...29,662,804
Ensembl chr 5:29,631,570...29,662,657
|
|
G |
Socs5 |
suppressor of cytokine signaling 5 |
involved_in |
ISO |
(MGI:3687909|PMID:12242343) |
RGD |
PMID:12242343 |
MGI:3687909 |
NCBI chr 6:7,481,039...7,512,644
Ensembl chr 6:7,481,095...7,514,834
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|
|
G |
Malt1 |
MALT1 paracaspase |
involved_in |
ISO |
(MGI:6142401|PMID:25282160) |
RGD |
PMID:25282160 |
MGI:6142401 |
NCBI chr18:58,942,282...58,996,318
Ensembl chr18:58,942,299...58,994,260
|
|
G |
Mir326 |
microRNA 326 |
acts_upstream_of_or_within |
ISO |
(PMID:19838199) |
RGD |
PMID:19838199 |
|
NCBI chr 1:153,854,029...153,854,123
Ensembl chr 1:153,854,029...153,854,123
|
|
G |
Nfkbid |
NFKB inhibitor delta |
involved_in |
ISO |
(MGI:6142401|PMID:25282160) |
RGD |
PMID:25282160 |
MGI:6142401 |
NCBI chr 1:85,679,353...85,690,415
Ensembl chr 1:85,680,861...85,690,447
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|
G |
Nfkbiz |
NFKB inhibitor zeta |
involved_in |
ISO |
(MGI:6142401|PMID:25282160) |
RGD |
PMID:25282160 |
MGI:6142401 |
NCBI chr11:44,782,676...44,810,722
Ensembl chr11:44,782,676...44,810,723
|
|
G |
Nlrp3 |
NLR family, pyrin domain containing 3 |
involved_in |
ISO |
(MGI:5689221|PMID:26098997) |
RGD |
PMID:26098997 |
MGI:5689221 |
NCBI chr10:44,326,770...44,353,814
Ensembl chr10:44,328,566...44,352,811
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|
|
G |
Brd2 |
bromodomain containing 2 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:6106706|PMID:28262505) (PMID:28262505) |
UniProt RGD |
PMID:28262505 |
GO_REF:0000024 MGI:6106706 |
NCBI chr20:4,727,078...4,735,389
Ensembl chr20:4,728,151...4,735,388
|
|
G |
Brd4 |
bromodomain containing 4 |
involved_in |
ISO |
(MGI:6106706|PMID:28262505) |
RGD |
PMID:28262505 |
MGI:6106706 |
NCBI chr 7:11,216,446...11,296,029
Ensembl chr 7:11,216,446...11,295,539
|
|
G |
Ep300 |
E1A binding protein p300 |
involved_in |
ISO |
(PMID:28262505) |
RGD |
PMID:28262505 |
|
NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088 Ensembl chr 7:113,106,247...113,136,088
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|
G |
Il23a |
interleukin 23 subunit alpha |
involved_in |
ISO IBA |
(MGI:3851279|PMID:19501566) GO_REF:0000033 |
RGD GO_Central |
PMID:19501566 |
GO_REF:0000033 MGI:3851279 |
NCBI chr 7:721,809...723,923
Ensembl chr 7:721,809...723,923
|
|
G |
Opa1 |
OPA1, mitochondrial dynamin like GTPase |
involved_in |
ISS |
GO_REF:0000024 |
UniProt |
|
GO_REF:0000024 |
NCBI chr11:71,108,100...71,185,170
Ensembl chr11:71,109,873...71,185,109
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|
|
G |
Prkcq |
protein kinase C, theta |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (MGI:3587418|PMID:15263025) |
UniProt Ensembl RGD |
PMID:15263025 |
GO_REF:0000024 GO_REF:0000107 MGI:3587418 |
NCBI chr17:67,246,394...67,379,049
Ensembl chr17:67,246,394...67,378,704
|
|
G |
Tnfsf4 |
TNF superfamily member 4 |
involved_in |
ISO |
(MGI:3763508|PMID:12496423) |
RGD |
PMID:12496423 |
MGI:3763508 |
NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788
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|
|
G |
Il18 |
interleukin 18 |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:3608083|PMID:12829194) |
Ensembl RGD |
PMID:12829194 |
GO_REF:0000107 MGI:3608083 |
NCBI chr 8:50,904,630...50,932,887
Ensembl chr 8:50,906,960...50,932,887
|
|
G |
Il4r |
interleukin 4 receptor |
acts_upstream_of_or_within |
ISO |
MGI:96109 (PMID:16424184) |
RGD |
PMID:16424184 |
|
NCBI chr 1:180,115,061...180,139,981
Ensembl chr 1:180,115,120...180,139,980
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|
G |
Il6 |
interleukin 6 |
acts_upstream_of_or_within |
ISO |
(PMID:12594267) |
RGD |
PMID:12594267 |
|
NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
|
|
G |
Nlrp3 |
NLR family, pyrin domain containing 3 |
involved_in |
ISO |
(MGI:5689221|PMID:26098997) |
RGD |
PMID:26098997 |
MGI:5689221 |
NCBI chr10:44,326,770...44,353,814
Ensembl chr10:44,328,566...44,352,811
|
|
G |
Prkcz |
protein kinase C, zeta |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3584076|PMID:15987782) |
UniProt RGD |
PMID:15987782 |
GO_REF:0000024 MGI:3584076 |
NCBI chr 5:165,817,786...165,930,386
Ensembl chr 5:165,819,466...165,930,367
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|
G |
Rara |
retinoic acid receptor, alpha |
involved_in |
ISO |
(PMID:18416830) |
RGD |
PMID:18416830 |
|
NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142
|
|
G |
Tnfsf4 |
TNF superfamily member 4 |
involved_in |
ISO |
(MGI:4943387|PMID:18354165) |
RGD |
PMID:18354165 |
MGI:4943387 |
NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788
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|
|
G |
Shb |
SH2 domain containing adaptor protein B |
acts_upstream_of_or_within |
ISO |
MGI:3721903 (PMID:24645804) |
RGD |
PMID:24645804 |
|
NCBI chr 5:59,678,066...59,785,443
Ensembl chr 5:59,678,216...59,785,538
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|
|
G |
Sh3rf1 |
SH3 domain containing ring finger 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:6158776|PMID:27084103) |
UniProt RGD |
PMID:27084103 |
GO_REF:0000024 MGI:6158776 |
NCBI chr16:28,735,522...28,901,261
Ensembl chr16:28,735,440...28,901,644
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|
|
G |
Il2 |
interleukin 2 |
acts_upstream_of_or_within |
ISO |
MGI:1857191 (PMID:16227984) |
RGD |
PMID:16227984 |
|
NCBI chr 2:120,004,862...120,009,566
Ensembl chr 2:120,004,862...120,009,566
|
|
G |
Il2ra |
interleukin 2 receptor subunit alpha |
acts_upstream_of_or_within |
ISO |
MGI:1857192 (PMID:16227984) |
RGD |
PMID:16227984 |
|
NCBI chr17:66,849,974...66,898,665
Ensembl chr17:66,849,974...66,898,697
|
|
|
G |
Il27 |
interleukin 27 |
involved_in |
ISO IBA |
(PMID:12734330) GO_REF:0000033 |
RGD GO_Central |
PMID:12734330 |
GO_REF:0000033 |
NCBI chr 1:181,173,108...181,178,720
Ensembl chr 1:181,173,372...181,178,582
|
|
|
G |
Ccl20 |
C-C motif chemokine ligand 20 |
NOT|involved_in |
ISO |
(MGI:3820359|PMID:19050256) |
RGD |
PMID:19050256 |
MGI:3820359 |
NCBI chr 9:84,389,031...84,391,629
Ensembl chr 9:84,388,904...84,391,629
|
|
G |
Ccr6 |
C-C motif chemokine receptor 6 |
NOT|involved_in |
ISO |
(MGI:3820359|PMID:19050256) |
RGD |
PMID:19050256 |
MGI:3820359 |
NCBI chr 1:52,474,477...52,508,301
Ensembl chr 1:52,474,168...52,498,603
|
|
G |
Mir301a |
microRNA 301a |
acts_upstream_of_or_within |
ISO |
(PMID:22517757) |
RGD |
PMID:22517757 |
|
NCBI chr10:71,925,336...71,925,435
Ensembl chr10:71,925,336...71,925,435
|
|
|
G |
Gata3 |
GATA binding protein 3 |
acts_upstream_of_or_within |
ISO |
MGI:3487291 (PMID:18776904) |
RGD |
PMID:18776904 |
|
NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
|
|
G |
Il12rb2 |
interleukin 12 receptor subunit beta 2 |
|
NAS |
|
RGD |
PMID:10651948 |
RGD:1331512 |
NCBI chr 4:96,426,396...96,515,251
Ensembl chr 4:96,426,842...96,515,289
|
|
G |
RT1-Da |
RT1 class II, locus Da |
involved_in |
ISO |
(PMID:15322540) |
RGD |
PMID:15322540 |
|
NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455
|
|
G |
RT1-Db1 |
RT1 class II, locus Db1 |
involved_in |
ISO |
(PMID:15322540) |
RGD |
PMID:15322540 |
|
NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
|
|
G |
Zbtb7b |
zinc finger and BTB domain containing 7B |
acts_upstream_of_or_within |
ISO |
MGI:3817628 (PMID:18776904) |
RGD |
PMID:18776904 |
|
NCBI chr 2:174,795,831...174,811,980
Ensembl chr 2:174,797,453...174,814,236
|
|
Term paths to the root
Path 1 |
biological_process |
19694 |
|
immune system process |
2822 |
|
leukocyte activation |
1032 |
|
lymphocyte activation |
837 |
|
T cell activation |
591 |
|
alpha-beta T cell activation |
200 |
|
regulation of alpha-beta T cell activation |
126 |
|
regulation of CD4-positive, alpha-beta T cell activation |
84 |
|
negative regulation of CD4-positive, alpha-beta T cell activation + |
38 |
|
positive regulation of CD4-positive, alpha-beta T cell activation + |
46 |
|
regulation of CD4-positive, alpha-beta T cell costimulation + |
2 |
|
regulation of CD4-positive, alpha-beta T cell differentiation + |
60 |
|
regulation of CD4-positive, alpha-beta T cell proliferation + |
26 |
|
regulation of T-helper 1 cell activation + |
1 |
|
regulation of T-helper 2 cell activation + |
2 |
|
Path 2 |
biological_process |
19694 |
|
biological regulation |
13309 |
|
regulation of biological process |
12906 |
|
regulation of cellular process |
12363 |
|
regulation of cell activation |
650 |
|
regulation of leukocyte activation |
594 |
|
regulation of lymphocyte activation |
514 |
|
regulation of T cell activation |
378 |
|
regulation of alpha-beta T cell activation |
126 |
|
regulation of CD4-positive, alpha-beta T cell activation |
84 |
|
negative regulation of CD4-positive, alpha-beta T cell activation + |
38 |
|
positive regulation of CD4-positive, alpha-beta T cell activation + |
46 |
|
regulation of CD4-positive, alpha-beta T cell costimulation + |
2 |
|
regulation of CD4-positive, alpha-beta T cell differentiation + |
60 |
|
regulation of CD4-positive, alpha-beta T cell proliferation + |
26 |
|
regulation of T-helper 1 cell activation + |
1 |
|
regulation of T-helper 2 cell activation + |
2 |
|
| |
|