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ONTOLOGY REPORT - ANNOTATIONS

Term:non-motile cilium
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Accession:GO:0097730 term browser browse the term
Definition:A cilium which may have a variable array of axonemal microtubules but does not contain molecular motors.
Synonyms:exact_synonym: immotile cilium;   nonmotile cilium
 related_synonym: immotile primary cilium;   nonmotile primary cilia;   nonmotile primary cilium;   sensory cilium
 alt_id: GO:0031513


show annotations for term's descendants           Sort by:
non-motile cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 located_in IDA (PMID:19625297), (PMID:19718039) MGI PMID:19625297 PMID:19718039 NCBI chr10:20,827,274...20,956,328
Ensembl chr10:20,828,446...20,956,328 		JBrowse link
G Ano2 anoctamin 2 located_in IDA (PMID:21516098) MGI PMID:21516098 NCBI chr 6:125,667,382...126,017,115
Ensembl chr 6:125,667,382...126,017,089 		JBrowse link
G Arl13a ADP-ribosylation factor-like 13A is_active_in IBA GO_Central GO_REF:0000033 NCBI chr  X:133,088,250...133,108,779
Ensembl chr  X:133,088,250...133,108,777 		JBrowse link
G Arl13b ADP-ribosylation factor-like 13B is_active_in IBA GO_Central GO_REF:0000033 NCBI chr16:62,613,671...62,667,418
Ensembl chr16:62,614,048...62,667,403 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 located_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:59,229,249...59,260,791
Ensembl chr 9:59,229,273...59,260,791 		JBrowse link
G Cep89 centrosomal protein 89 located_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:35,096,425...35,139,255
Ensembl chr 7:35,096,460...35,138,114 		JBrowse link
G Cfap69 cilia and flagella associated protein 69 located_in
is_active_in		 IMP
IBA		 (MGI:5906062|PMID:28495971) UniProt
GO_Central		 PMID:28495971 GO_REF:0000033 MGI:5906062 NCBI chr 5:5,629,284...5,714,232
Ensembl chr 5:5,629,278...5,714,239 		JBrowse link
G Dnaaf4 dynein axonemal assembly factor 4 located_in ISO MGI GO_REF:0000008 NCBI chr 9:72,863,574...72,880,971
Ensembl chr 9:72,866,067...72,880,346 		JBrowse link
G Drd1 dopamine receptor D1 located_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:54,205,202...54,209,677
Ensembl chr13:54,205,202...54,209,724 		JBrowse link
G Drd2 dopamine receptor D2 located_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:49,251,703...49,319,468
Ensembl chr 9:49,251,927...49,319,477 		JBrowse link
G Drd5 dopamine receptor D5 located_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:38,476,742...38,479,868
Ensembl chr 5:38,476,710...38,479,861 		JBrowse link
G Erich3 glutamate rich 3 located_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:154,416,770...154,454,649
Ensembl chr 3:154,369,496...154,473,427 		JBrowse link
G Galr3 galanin receptor 3 located_in IDA (PMID:24316073) MGI PMID:24316073 NCBI chr15:78,926,085...78,927,758
Ensembl chr15:78,926,085...78,927,758 		JBrowse link
G Glis2 GLIS family zinc finger 2 located_in IDA (PMID:17618285) MGI PMID:17618285 NCBI chr16:4,412,217...4,443,076
Ensembl chr16:4,412,577...4,442,788 		JBrowse link
G Gpr83 G protein-coupled receptor 83 located_in IDA (PMID:24316073) MGI PMID:24316073 NCBI chr 9:14,771,038...14,782,085
Ensembl chr 9:14,771,506...14,782,085 		JBrowse link
G Gucy2d guanylate cyclase 2d located_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 7:98,089,623...98,126,685
Ensembl chr 7:98,089,623...98,126,686 		JBrowse link
G Hyls1 HYLS1, centriolar and ciliogenesis associated is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 9:35,472,117...35,481,365
Ensembl chr 9:35,472,116...35,481,694 		JBrowse link
G Ift122 intraflagellar transport 122 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 6:115,830,340...115,903,660
Ensembl chr 6:115,830,431...115,903,660 		JBrowse link
G Ift140 intraflagellar transport 140 located_in IDA (PMID:24009529) MGI PMID:24009529 NCBI chr17:25,235,056...25,318,461
Ensembl chr17:25,235,059...25,318,469 		JBrowse link
G Ift88 intraflagellar transport 88 is_active_in
located_in		 IBA
IDA		 (PMID:16254602) GO_Central
MGI		 PMID:16254602 GO_REF:0000033 NCBI chr14:57,661,519...57,755,393
Ensembl chr14:57,661,519...57,755,393 		JBrowse link
G Mchr1 melanin-concentrating hormone receptor 1 located_in IDA (MGI:3778303|PMID:18334641), (PMID:23029470), (PMID:23351594) BHF-UCL PMID:18334641 PMID:23029470 PMID:23351594 MGI:3778303 NCBI chr15:81,119,700...81,123,165
Ensembl chr15:81,119,700...81,123,165 		JBrowse link
G Mdm1 MDM1 nuclear protein located_in IDA (PMID:23300604) MGI PMID:23300604 NCBI chr10:117,977,446...118,004,904
Ensembl chr10:117,977,716...118,004,902 		JBrowse link
G Mlf1 myeloid leukemia factor 1 located_in IDA (PMID:23300604) MGI PMID:23300604 NCBI chr 3:67,281,430...67,307,333
Ensembl chr 3:67,281,430...67,307,336 		JBrowse link
G Nphp4 nephronophthisis 4 (juvenile) homolog (human) is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 4:152,561,163...152,647,641
Ensembl chr 4:152,561,163...152,647,640 		JBrowse link
G Npy2r neuropeptide Y receptor Y2 located_in IDA (PMID:24316073) MGI PMID:24316073 NCBI chr 3:82,445,688...82,455,404
Ensembl chr 3:82,445,690...82,455,391 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 NOT|located_in IDA (PMID:17314247) MGI PMID:17314247 NCBI chr11:74,564,775...74,615,210
Ensembl chr11:74,564,775...74,615,496 		JBrowse link
G Pcm1 pericentriolar material 1 NOT|located_in ISO (PMID:17574030) BHF-UCL PMID:17574030 NCBI chr 8:41,692,521...41,787,125
Ensembl chr 8:41,692,789...41,785,381 		JBrowse link
G Pgr15l G protein-coupled receptor 15-like located_in IDA (PMID:24316073) MGI PMID:24316073 NCBI chr  X:96,116,202...96,125,710
Ensembl chr  X:96,116,202...96,125,710 		JBrowse link
G Pkd1l1 polycystic kidney disease 1 like 1 located_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:8,782,025...8,924,365
Ensembl chr11:8,776,708...8,938,709 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel located_in IDA (PMID:12062067) MGI PMID:12062067 NCBI chr 5:104,599,379...104,653,685
Ensembl chr 5:104,607,316...104,653,685 		JBrowse link
G Pkd2l1 polycystic kidney disease 2-like 1 located_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:44,136,076...44,235,355
Ensembl chr19:44,136,076...44,180,881 		JBrowse link
G Qrfpr pyroglutamylated RFamide peptide receptor located_in IDA (PMID:24316073) MGI PMID:24316073 NCBI chr 3:36,233,575...36,276,462
Ensembl chr 3:36,233,573...36,276,462 		JBrowse link
G Rab8a RAB8A, member RAS oncogene family located_in ISO
IDA		 (PMID:19625297), (PMID:20592197) MGI PMID:19625297 PMID:20592197 GO_REF:0000119 MGI:4834177 NCBI chr 8:72,915,044...72,935,210
Ensembl chr 8:72,915,044...72,937,748 		JBrowse link
G Rpgrip1 retinitis pigmentosa GTPase regulator interacting protein 1 located_in IDA (PMID:20592197) MGI PMID:20592197 NCBI chr14:52,341,698...52,398,796
Ensembl chr14:52,348,161...52,401,003 		JBrowse link
G Septin2 septin 2 located_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:93,406,238...93,437,455
Ensembl chr 1:93,406,686...93,437,982
Ensembl chr 1:93,406,686...93,437,982 		JBrowse link
G Septin7 septin 7 located_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:25,163,287...25,219,867
Ensembl chr 9:25,163,735...25,219,867 		JBrowse link
G Septin9 septin 9 located_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:117,090,487...117,253,151
Ensembl chr11:117,090,487...117,253,151 		JBrowse link
G Sstr3 somatostatin receptor 3 located_in IDA (MGI:3778303|PMID:18334641), (PMID:22832925), (PMID:23029470), (PMID:23351594) MGI PMID:18334641 PMID:22832925 PMID:23029470 PMID:23351594 MGI:3778303 NCBI chr15:78,421,214...78,433,565
Ensembl chr15:78,421,208...78,428,885 		JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr12:98,886,796...98,949,509
Ensembl chr12:98,886,833...98,949,497 		JBrowse link
G Tubg1 tubulin, gamma 1 located_in IDA (PMID:20592197) MGI PMID:20592197 NCBI chr11:101,010,725...101,017,249
Ensembl chr11:101,010,764...101,017,245 		JBrowse link
G Wdr19 WD repeat domain 19 located_in IDA (MGI:4835147|PMID:16957054) UniProt PMID:16957054 MGI:4835147 NCBI chr 5:65,357,039...65,417,758
Ensembl chr 5:65,357,039...65,417,758 		JBrowse link
9+0 non-motile cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C130074G19Rik RIKEN cDNA C130074G19 gene located_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:184,604,123...184,615,233
Ensembl chr 1:184,604,123...184,615,415 		JBrowse link
G Cfap96 cilia and flagella associated protein 96 located_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:46,387,980...46,428,290
Ensembl chr 8:46,406,643...46,428,477 		JBrowse link
G Dynll2 dynein light chain LC8-type 2 located_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:87,870,351...87,892,746
Ensembl chr11:87,870,351...87,878,359 		JBrowse link
G Enkd1 enkurin domain containing 1 located_in IDA (PMID:29257953) MGI PMID:29257953 NCBI chr 8:106,430,281...106,435,358
Ensembl chr 8:106,430,283...106,434,842 		JBrowse link
G Ift80 intraflagellar transport 80 is_active_in IDA (PMID:26996322) MGI PMID:26996322 NCBI chr 3:68,799,832...68,911,939
Ensembl chr 3:68,799,832...68,911,892 		JBrowse link
G Iftap intraflagellar transport associated protein is_active_in
located_in		 IBA
IDA		 (PMID:26703212) GO_Central
MGI		 PMID:26703212 GO_REF:0000033 NCBI chr 2:101,391,124...101,459,376
Ensembl chr 2:101,391,126...101,479,877 		JBrowse link
G Phyh phytanoyl-CoA hydroxylase located_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:4,923,807...4,943,554
Ensembl chr 2:4,923,830...4,943,541 		JBrowse link
G Pkhd1 polycystic kidney and hepatic disease 1 located_in IDA (PMID:24586199) MGI PMID:24586199 NCBI chr 1:20,128,003...20,688,306
Ensembl chr 1:20,128,003...20,688,288 		JBrowse link
G Smo smoothened, frizzled class receptor located_in IDA (PMID:26996322) MGI PMID:26996322 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
G Ttll4 tubulin tyrosine ligase-like family, member 4 located_in IDA (PMID:17499049) MGI PMID:17499049 NCBI chr 1:74,700,804...74,740,991
Ensembl chr 1:74,700,904...74,742,889 		JBrowse link
G Ttll5 tubulin tyrosine ligase-like family, member 5 located_in IDA (PMID:17499049) MGI PMID:17499049 NCBI chr12:85,871,417...86,100,534
Ensembl chr12:85,871,433...86,108,667 		JBrowse link
G Ttll6 tubulin tyrosine ligase-like family, member 6 located_in IDA (PMID:17499049) MGI PMID:17499049 NCBI chr11:96,015,283...96,057,008
Ensembl chr11:96,024,612...96,056,277 		JBrowse link
G Ttll7 tubulin tyrosine ligase-like family, member 7 located_in IDA (PMID:17499049) MGI PMID:17499049 NCBI chr 3:146,557,312...146,690,156
Ensembl chr 3:146,558,122...146,689,764 		JBrowse link
G Tulp3 TUB like protein 3 located_in ISO MGI GO_REF:0000008 NCBI chr 6:128,298,103...128,332,833
Ensembl chr 6:128,298,124...128,332,814 		JBrowse link
cone photoreceptor outer segment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnga3 cyclic nucleotide gated channel alpha 3 located_in IDA (PMID:10813773) MGI PMID:10813773 NCBI chr 1:37,257,317...37,302,465
Ensembl chr 1:37,253,515...37,302,465 		JBrowse link
G Guca1a guanylate cyclase activator 1a (retina) located_in
is_active_in		 IDA
IBA
ISO		 (MGI:6437034|PMID:9620085) UniProt
GO_Central
MGI		 PMID:9620085 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:6437034 NCBI chr17:47,705,482...47,724,439
Ensembl chr17:47,705,483...47,711,509 		JBrowse link
G Guca1b guanylate cyclase activator 1B located_in
is_active_in		 ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr17:47,692,526...47,703,892
Ensembl chr17:47,696,318...47,703,892 		JBrowse link
G Ift140 intraflagellar transport 140 located_in IDA (PMID:24619649) MGI PMID:24619649 NCBI chr17:25,235,056...25,318,461
Ensembl chr17:25,235,059...25,318,469 		JBrowse link
G Opn1sw opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan) located_in IDA (PMID:10813773) MGI PMID:10813773 NCBI chr 6:29,376,670...29,380,512
Ensembl chr 6:29,376,670...29,388,467 		JBrowse link
G Pcare photoreceptor cilium actin regulator located_in IDA (PMID:25616964) MGI PMID:25616964 NCBI chr17:72,050,919...72,059,904
Ensembl chr17:72,050,550...72,059,889 		JBrowse link
G Prkca protein kinase C, alpha located_in IDA (PMID:10813773) MGI PMID:10813773 NCBI chr11:107,824,213...108,237,360
Ensembl chr11:107,824,213...108,234,754 		JBrowse link
G Rd3 retinal degeneration 3 located_in IDA (MGI:4867355|PMID:21078983) UniProt PMID:21078983 MGI:4867355 NCBI chr 1:191,688,574...191,725,497
Ensembl chr 1:191,709,331...191,720,244 		JBrowse link
G Slc24a4 solute carrier family 24 (sodium/potassium/calcium exchanger), member 4 located_in IDA (MGI:6116933|PMID:28650316) ARUK-UCL PMID:28650316 MGI:6116933 NCBI chr12:102,094,986...102,239,562
Ensembl chr12:102,094,992...102,233,350 		JBrowse link
G Tmem237 transmembrane protein 237 located_in IDA (PMID:20375344) MGI PMID:20375344 NCBI chr 1:59,139,743...59,159,567
Ensembl chr 1:59,139,749...59,159,567 		JBrowse link
kinociliary basal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc14a CDC14 cell division cycle 14A located_in IDA (MGI:6118860|PMID:29293958) UniProt PMID:29293958 MGI:6118860 NCBI chr 3:116,066,202...116,222,390
Ensembl chr 3:116,066,202...116,222,394 		JBrowse link
G Ift20 intraflagellar transport 20 located_in IDA (PMID:25605782) MGI PMID:25605782 NCBI chr11:78,427,187...78,432,558
Ensembl chr11:78,427,187...78,432,563 		JBrowse link
G Mkks McKusick-Kaufman syndrome located_in
is_active_in		 IDA
IBA		 (PMID:22446187) MGI
GO_Central		 PMID:22446187 GO_REF:0000033 NCBI chr 2:136,715,700...136,733,422
Ensembl chr 2:136,715,700...136,733,309 		JBrowse link
kinocilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc14a CDC14 cell division cycle 14A located_in IDA (MGI:6118860|PMID:29293958) UniProt PMID:29293958 MGI:6118860 NCBI chr 3:116,066,202...116,222,390
Ensembl chr 3:116,066,202...116,222,394 		JBrowse link
G Cdh23 cadherin related 23 (otocadherin) located_in IDA (PMID:15882574) MGI PMID:15882574 NCBI chr10:60,138,527...60,532,291
Ensembl chr10:60,138,527...60,532,269 		JBrowse link
G Dcdc2a doublecortin domain containing 2a located_in
is_active_in		 ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000096 MGI:4417868 NCBI chr13:25,239,126...25,394,689
Ensembl chr13:25,239,987...25,394,689 		JBrowse link
G Grxcr1 glutaredoxin, cysteine rich 1 located_in
is_active_in		 IDA
IBA		 (MGI:4421424|PMID:20137774) UniProt
GO_Central		 PMID:20137774 GO_REF:0000033 MGI:4421424 NCBI chr 5:68,189,122...68,323,741
Ensembl chr 5:68,189,178...68,323,741 		JBrowse link
G Ift88 intraflagellar transport 88 located_in IDA (PMID:18066062) MGI PMID:18066062 NCBI chr14:57,661,519...57,755,393
Ensembl chr14:57,661,519...57,755,393 		JBrowse link
G Kncn kinocilin is_active_in
located_in		 IBA
IDA		 (PMID:15855039), (PMID:20510926) GO_Central
MGI		 PMID:15855039 PMID:20510926 GO_REF:0000033 NCBI chr 4:115,741,597...115,745,079
Ensembl chr 4:115,741,597...115,746,723 		JBrowse link
G Rac1 Rac family small GTPase 1 located_in IDA (PMID:23533177) MGI PMID:23533177 NCBI chr 5:143,491,236...143,513,786
Ensembl chr 5:143,489,389...143,513,791 		JBrowse link
G Strc stereocilin located_in
is_active_in		 IDA
IBA		 (MGI:5430850|PMID:21165971) UniProt
GO_Central		 PMID:21165971 GO_REF:0000033 MGI:5430850 NCBI chr 2:121,193,729...121,211,851
Ensembl chr 2:121,194,209...121,217,649 		JBrowse link
G Tiam1 T cell lymphoma invasion and metastasis 1 located_in IDA (PMID:23533177) MGI PMID:23533177 NCBI chr16:89,583,999...89,942,488
Ensembl chr16:89,583,999...89,940,657 		JBrowse link
non-motile cilium membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnga2 cyclic nucleotide gated channel alpha 2 located_in ISO PMID:10377344 UniProt PMID:10377344 RGD:632392 NCBI chr  X:71,035,455...71,053,824
Ensembl chr  X:71,035,455...71,053,824 		JBrowse link
G Cnga4 cyclic nucleotide gated channel alpha 4 located_in ISO PMID:10377344 UniProt PMID:10377344 RGD:632392 NCBI chr 7:105,049,247...105,057,981
Ensembl chr 7:105,053,775...105,057,949 		JBrowse link
G Cngb1 cyclic nucleotide gated channel beta 1 located_in ISO PMID:10377344 UniProt PMID:10377344 RGD:632392 NCBI chr 8:95,965,671...96,033,213
Ensembl chr 8:95,965,673...96,033,213 		JBrowse link
photoreceptor cell cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a4 ATPase, Na+/K+ transporting, alpha 4 polypeptide located_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:172,051,075...172,085,991
Ensembl chr 1:172,051,080...172,085,981 		JBrowse link
G Cfap410 cilia and flagella associated protein 410 located_in IDA (PMID:29899041) MGI PMID:29899041 NCBI chr10:77,814,364...77,821,272
Ensembl chr10:77,814,358...77,822,739 		JBrowse link
G Fam161a family with sequence similarity 161, member A located_in IDA (MGI:5438885|PMID:22791751) UniProt PMID:22791751 MGI:5438885 NCBI chr11:22,956,725...22,995,743
Ensembl chr11:22,957,531...22,980,788 		JBrowse link
G Ift52 intraflagellar transport 52 located_in IDA (PMID:29899041) MGI PMID:29899041 NCBI chr 2:162,859,200...162,888,075
Ensembl chr 2:162,859,274...162,888,061 		JBrowse link
G Pex6 peroxisomal biogenesis factor 6 located_in IDA
ISO		 (MGI:5816430|PMID:26593283) UniProt
MGI		 PMID:26593283 GO_REF:0000119 MGI:4834177 MGI:5816430 NCBI chr17:47,022,402...47,036,469
Ensembl chr17:47,022,389...47,036,467 		JBrowse link
G Rp1 retinitis pigmentosa 1 (human) located_in IDA (PMID:29899041) MGI PMID:29899041 NCBI chr 1:4,185,896...4,479,508
Ensembl chr 1:4,069,780...4,479,464 		JBrowse link
G Sdccag8 serologically defined colon cancer antigen 8 located_in IDA (PMID:29899041) MGI PMID:29899041 NCBI chr 1:176,642,226...176,848,004
Ensembl chr 1:176,642,226...176,848,003 		JBrowse link
G Ush1g USH1 protein network component sans located_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:115,206,018...115,214,239
Ensembl chr11:115,206,018...115,212,867 		JBrowse link
photoreceptor connecting cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrv1 adhesion G protein-coupled receptor V1 located_in IDA (PMID:17906286) MGI PMID:17906286 NCBI chr13:81,243,187...81,781,504
Ensembl chr13:81,243,187...81,781,273 		JBrowse link
G Alpk1 alpha-kinase 1 located_in IDA (MGI:6717246|PMID:30967659) UniProt PMID:30967659 MGI:6717246 NCBI chr 3:127,460,367...127,574,195
Ensembl chr 3:127,463,959...127,574,176 		JBrowse link
G Arl3 ADP-ribosylation factor-like 3 located_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:46,519,548...46,561,621
Ensembl chr19:46,519,535...46,561,637 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 located_in IDA (PMID:23943788) MGI PMID:23943788 NCBI chr 9:59,229,249...59,260,791
Ensembl chr 9:59,229,273...59,260,791 		JBrowse link
G Cep290 centrosomal protein 290 located_in IDA (MGI:3624140|PMID:16632484), (MGI:3653539|PMID:16682973), (PMID:23943788) UniProt PMID:16632484 PMID:16682973 PMID:23943788 MGI:3624140 MGI:3653539 NCBI chr10:100,323,410...100,409,527
Ensembl chr10:100,323,420...100,410,702 		JBrowse link
G Cetn1 centrin 1 located_in IDA (MGI:6393223|PMID:30120214), (PMID:15347651) MGI PMID:15347651 PMID:30120214 MGI:6393223 NCBI chr18:9,618,419...9,619,469
Ensembl chr18:9,615,524...9,619,478 		JBrowse link
G Cetn2 centrin 2 located_in IDA (PMID:15347651) MGI PMID:15347651 NCBI chr  X:71,957,137...71,961,967
Ensembl chr  X:71,957,138...71,962,017 		JBrowse link
G Cetn3 centrin 3 located_in IDA (PMID:15347651), (PMID:22031837), (PMID:24833722) MGI PMID:15347651 PMID:22031837 PMID:24833722 NCBI chr13:81,928,201...81,945,274
Ensembl chr13:81,931,196...81,945,274 		JBrowse link
G Cfap410 cilia and flagella associated protein 410 located_in IDA (MGI:5770162|PMID:26974433) UniProt PMID:26974433 MGI:5770162 NCBI chr10:77,814,364...77,821,272
Ensembl chr10:77,814,358...77,822,739 		JBrowse link
G D630045J12Rik RIKEN cDNA D630045J12 gene located_in IDA (MGI:6393223|PMID:30120214) UniProt PMID:30120214 MGI:6393223 NCBI chr 6:38,100,109...38,231,074
Ensembl chr 6:38,100,109...38,230,944 		JBrowse link
G Fam161a family with sequence similarity 161, member A located_in
is_active_in		 ISO
IBA
IDA		 (MGI:5438885|PMID:22791751), (MGI:5442623|PMID:22940612), (PMID:24833722) MGI
GO_Central
UniProt		 PMID:22791751 PMID:22940612 PMID:24833722 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 MGI:5438885 MGI:5442623 NCBI chr11:22,956,725...22,995,743
Ensembl chr11:22,957,531...22,980,788 		JBrowse link
G Gnat1 G protein subunit alpha transducin 1 located_in IDA (PMID:17881533) MGI PMID:17881533 NCBI chr 9:107,551,636...107,556,833
Ensembl chr 9:107,551,673...107,556,911 		JBrowse link
G Ift122 intraflagellar transport 122 located_in IDA (MGI:3839506|PMID:19208653) UniProt PMID:19208653 MGI:3839506 NCBI chr 6:115,830,340...115,903,660
Ensembl chr 6:115,830,431...115,903,660 		JBrowse link
G Ift140 intraflagellar transport 140 located_in IDA (PMID:20368623), (PMID:24619649) MGI PMID:20368623 PMID:24619649 NCBI chr17:25,235,056...25,318,461
Ensembl chr17:25,235,059...25,318,469 		JBrowse link
G Ift20 intraflagellar transport 20 located_in ISO
IDA		 (PMID:21307337) MGI PMID:21307337 GO_REF:0000119 MGI:4834177 NCBI chr11:78,427,187...78,432,558
Ensembl chr11:78,427,187...78,432,563 		JBrowse link
G Ift52 intraflagellar transport 52 located_in ISO
IDA		 (PMID:20368623) MGI PMID:20368623 GO_REF:0000119 MGI:4834177 NCBI chr 2:162,859,200...162,888,075
Ensembl chr 2:162,859,274...162,888,061 		JBrowse link
G Ift57 intraflagellar transport 57 located_in ISO
IDA		 (PMID:20368623) MGI PMID:20368623 GO_REF:0000119 MGI:4834177 NCBI chr16:49,519,657...49,585,489
Ensembl chr16:49,519,596...49,585,489 		JBrowse link
G Ift88 intraflagellar transport 88 located_in IDA (MGI:3839506|PMID:19208653), (PMID:20368623) MGI PMID:19208653 PMID:20368623 MGI:3839506 NCBI chr14:57,661,519...57,755,393
Ensembl chr14:57,661,519...57,755,393 		JBrowse link
G Iqcb1 IQ calmodulin-binding motif containing 1 located_in IDA
ISO		 (MGI:3763297|PMID:15723066) HGNC-UCL
MGI		 PMID:15723066 GO_REF:0000119 MGI:3763297 MGI:4834177 NCBI chr16:36,648,722...36,694,044
Ensembl chr16:36,648,747...36,693,083 		JBrowse link
G Kif17 kinesin family member 17 located_in IDA (PMID:19384852) MGI PMID:19384852 NCBI chr 4:137,989,562...138,029,284
Ensembl chr 4:137,977,746...138,029,278 		JBrowse link
G Kif3a kinesin family member 3A located_in IDA (MGI:3839506|PMID:19208653) UniProt PMID:19208653 MGI:3839506 NCBI chr11:53,456,531...53,495,075
Ensembl chr11:53,458,206...53,492,794 		JBrowse link
G Kifap3 kinesin-associated protein 3 located_in IDA (PMID:19384852) MGI PMID:19384852 NCBI chr 1:163,589,711...163,744,676
Ensembl chr 1:163,607,152...163,744,678 		JBrowse link
G Lca5 Leber congenital amaurosis 5 (human) located_in IDA
ISO		 (MGI:5050784|PMID:21606596) UniProt
MGI		 PMID:21606596 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 MGI:5050784 NCBI chr 9:83,273,408...83,325,047
Ensembl chr 9:83,272,346...83,323,180 		JBrowse link
G Mak male germ cell-associated kinase located_in IDA (PMID:21148103) MGI PMID:21148103 NCBI chr13:41,178,483...41,233,182
Ensembl chr13:41,178,484...41,233,182 		JBrowse link
G Myo7a myosin VIIA located_in IDA (PMID:10414956) MGI PMID:10414956 NCBI chr 7:97,700,261...97,768,730
Ensembl chr 7:97,700,267...97,768,731 		JBrowse link
G Nphp1 nephronophthisis 1 (juvenile) homolog (human) located_in IDA (MGI:4821072|PMID:16885411) UniProt PMID:16885411 MGI:4821072 NCBI chr 2:127,582,652...127,630,833
Ensembl chr 2:127,582,652...127,630,817 		JBrowse link
G Nphp4 nephronophthisis 4 (juvenile) homolog (human) located_in IDA (PMID:21078623) MGI PMID:21078623 NCBI chr 4:152,561,163...152,647,641
Ensembl chr 4:152,561,163...152,647,640 		JBrowse link
G Pcdhb16 protocadherin beta 16 located_in IDA (PMID:18279309) MGI PMID:18279309 NCBI chr18:37,610,821...37,616,091
Ensembl chr18:37,610,867...37,616,091 		JBrowse link
G Pcdhb22 protocadherin beta 22 located_in IDA (PMID:18279309) MGI PMID:18279309 NCBI chr18:37,651,402...37,657,532
Ensembl chr18:37,650,924...37,657,532 		JBrowse link
G Rp1 retinitis pigmentosa 1 (human) located_in IDA
ISO		 (MGI:2676521|PMID:14507858), (PMID:11773008)
(PMID:11773008)		 MGI PMID:11773008 PMID:14507858 MGI:2676521 NCBI chr 1:4,185,896...4,479,508
Ensembl chr 1:4,069,780...4,479,464 		JBrowse link
G Rp1l1 retinitis pigmentosa 1 homolog like 1 located_in IDA (MGI:4353917|PMID:19657028) UniProt PMID:19657028 MGI:4353917 NCBI chr14:64,229,880...64,270,955
Ensembl chr14:64,229,955...64,272,474 		JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator located_in IDA (PMID:10725384) MGI PMID:10725384 NCBI chr  X:10,024,455...10,083,034
Ensembl chr  X:9,939,860...10,083,159 		JBrowse link
G Rpgrip1 retinitis pigmentosa GTPase regulator interacting protein 1 located_in
is_active_in		 IDA
IBA		 (MGI:5608598|PMID:25398945) UniProt
GO_Central		 PMID:25398945 GO_REF:0000033 MGI:5608598 NCBI chr14:52,341,698...52,398,796
Ensembl chr14:52,348,161...52,401,003 		JBrowse link
G Rpgrip1l Rpgrip1-like located_in
is_active_in		 ISO
IBA		 MGI
GO_Central
RGD		 PMID:17558407 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:11537356 NCBI chr 8:91,943,658...92,039,919
Ensembl chr 8:91,943,658...92,039,890 		JBrowse link
G Septin2 septin 2 located_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:93,406,238...93,437,455
Ensembl chr 1:93,406,686...93,437,982
Ensembl chr 1:93,406,686...93,437,982 		JBrowse link
G Spata7 spermatogenesis associated 7 located_in IDA (MGI:5608598|PMID:25398945) UniProt PMID:25398945 MGI:5608598 NCBI chr12:98,594,169...98,636,078
Ensembl chr12:98,594,416...98,636,074 		JBrowse link
G Sptbn5 spectrin beta, non-erythrocytic 5 located_in ISO (PMID:23704327) MGI PMID:23704327 NCBI chr 2:119,871,974...119,919,394
Ensembl chr 2:119,871,974...119,916,159 		JBrowse link
G Tbcc tubulin-specific chaperone C located_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:47,201,547...47,203,389
Ensembl chr17:47,201,610...47,202,773 		JBrowse link
G Tmem237 transmembrane protein 237 located_in IDA (PMID:20375344) MGI PMID:20375344 NCBI chr 1:59,139,743...59,159,567
Ensembl chr 1:59,139,749...59,159,567 		JBrowse link
G Topors topoisomerase I binding, arginine/serine-rich located_in
is_active_in		 IDA
IBA
ISO		 (MGI:4939557|PMID:21159800) BHF-UCL
GO_Central
MGI		 PMID:21159800 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:4939557 NCBI chr 4:40,259,606...40,269,841
Ensembl chr 4:40,259,601...40,269,850 		JBrowse link
G Tsga10ip testis specific 10 interacting protein is_active_in IBA GO_Central GO_REF:0000033 NCBI chr19:5,440,075...5,452,534
Ensembl chr19:5,440,077...5,452,554 		JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 located_in IDA (MGI:2677624|PMID:14520415) BHF-UCL PMID:14520415 MGI:2677624 NCBI chr12:98,886,796...98,949,509
Ensembl chr12:98,886,833...98,949,497 		JBrowse link
G Ush1g USH1 protein network component sans located_in IDA (PMID:17906286) MGI PMID:17906286 NCBI chr11:115,206,018...115,214,239
Ensembl chr11:115,206,018...115,212,867 		JBrowse link
G Ush2a usherin located_in ISO
IDA		 (PMID:17906286), (PMID:21212183) MGI PMID:17906286 PMID:21212183 GO_REF:0000096 MGI:4417868 NCBI chr 1:187,995,035...188,697,694
Ensembl chr 1:187,994,220...188,697,238 		JBrowse link
G Wdr19 WD repeat domain 19 located_in IDA (MGI:3839506|PMID:19208653) UniProt PMID:19208653 MGI:3839506 NCBI chr 5:65,357,039...65,417,758
Ensembl chr 5:65,357,039...65,417,758 		JBrowse link
G Whrn whirlin located_in ISO
IDA		 (PMID:17906286), (PMID:21212183) MGI PMID:17906286 PMID:21212183 GO_REF:0000096 MGI:4417868 NCBI chr 4:63,333,145...63,414,320
Ensembl chr 4:63,333,147...63,414,228 		JBrowse link
photoreceptor disc membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcdhb16 protocadherin beta 16 located_in IDA (PMID:18279309) MGI PMID:18279309 NCBI chr18:37,610,821...37,616,091
Ensembl chr18:37,610,867...37,616,091 		JBrowse link
G Rho rhodopsin located_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:115,903,741...115,916,999
Ensembl chr 6:115,908,709...115,916,997 		JBrowse link
G Sptbn5 spectrin beta, non-erythrocytic 5 located_in ISO (PMID:23704327) MGI PMID:23704327 NCBI chr 2:119,871,974...119,919,394
Ensembl chr 2:119,871,974...119,916,159 		JBrowse link
photoreceptor distal connecting cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 located_in IDA (PMID:29899041) MGI PMID:29899041 NCBI chr10:20,827,274...20,956,328
Ensembl chr10:20,828,446...20,956,328 		JBrowse link
G Cep290 centrosomal protein 290 located_in IDA (PMID:29899041) MGI PMID:29899041 NCBI chr10:100,323,410...100,409,527
Ensembl chr10:100,323,420...100,410,702 		JBrowse link
G Nphp1 nephronophthisis 1 (juvenile) homolog (human) located_in IDA (PMID:29899041) MGI PMID:29899041 NCBI chr 2:127,582,652...127,630,833
Ensembl chr 2:127,582,652...127,630,817 		JBrowse link
G Nphp4 nephronophthisis 4 (juvenile) homolog (human) located_in IDA (PMID:29899041) MGI PMID:29899041 NCBI chr 4:152,561,163...152,647,641
Ensembl chr 4:152,561,163...152,647,640 		JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator located_in IDA (PMID:29899041) MGI PMID:29899041 NCBI chr  X:10,024,455...10,083,034
Ensembl chr  X:9,939,860...10,083,159 		JBrowse link
G Rpgrip1 retinitis pigmentosa GTPase regulator interacting protein 1 located_in IDA (PMID:29899041) MGI PMID:29899041 NCBI chr14:52,341,698...52,398,796
Ensembl chr14:52,348,161...52,401,003 		JBrowse link
G Spata7 spermatogenesis associated 7 is_active_in
located_in		 IMP
IDA
IBA		 (PMID:29899041) MGI
GO_Central		 PMID:29899041 GO_REF:0000033 NCBI chr12:98,594,169...98,636,078
Ensembl chr12:98,594,416...98,636,074 		JBrowse link
photoreceptor outer segment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca4 ATP-binding cassette, sub-family A member 4 located_in IDA (MGI:1274766|PMID:9202155), (PMID:23943788) MGI PMID:9202155 PMID:23943788 MGI:1274766 NCBI chr 3:121,837,547...121,973,719
Ensembl chr 3:121,838,092...121,973,772 		JBrowse link
G Ahi1 Abelson helper integration site 1 located_in IDA (PMID:20592197) MGI PMID:20592197 NCBI chr10:20,827,274...20,956,328
Ensembl chr10:20,828,446...20,956,328 		JBrowse link
G Arr3 arrestin 3, retinal located_in IDA (PMID:10725384), (PMID:12486395) MGI PMID:10725384 PMID:12486395 NCBI chr  X:99,649,086...99,662,099
Ensembl chr  X:99,649,103...99,662,099 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 located_in IDA (PMID:23943788) MGI PMID:23943788 NCBI chr 9:59,229,249...59,260,791
Ensembl chr 9:59,229,273...59,260,791 		JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 located_in IDA (PMID:23943788) MGI PMID:23943788 NCBI chr 3:36,627,291...36,667,639
Ensembl chr 3:36,627,291...36,667,626 		JBrowse link
G Bsg basigin located_in IDA (MGI:6436439|PMID:25957687) UniProt PMID:25957687 MGI:6436439 NCBI chr10:79,540,192...79,547,813
Ensembl chr10:79,540,325...79,547,803 		JBrowse link
G Cacna1f calcium channel, voltage-dependent, alpha 1F subunit located_in ISO RGD
MGI		 PMID:11526344 GO_REF:0000096 MGI:4417868 RGD:632484 NCBI chr  X:7,473,342...7,501,435
Ensembl chr  X:7,473,322...7,501,435 		JBrowse link
G Cep250 centrosomal protein 250 located_in IDA (MGI:6254746|PMID:28005958) UniProt PMID:28005958 MGI:6254746 NCBI chr 2:155,798,197...155,840,820
Ensembl chr 2:155,798,378...155,840,820 		JBrowse link
G Cep290 centrosomal protein 290 located_in IDA (PMID:23943788) MGI PMID:23943788 NCBI chr10:100,323,410...100,409,527
Ensembl chr10:100,323,420...100,410,702 		JBrowse link
G Cerkl ceramide kinase-like located_in IDA (PMID:23142158) MGI PMID:23142158 NCBI chr 2:79,162,835...79,259,332
Ensembl chr 2:79,160,887...79,287,129 		JBrowse link
G Cfap410 cilia and flagella associated protein 410 located_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:77,814,364...77,821,272
Ensembl chr10:77,814,358...77,822,739 		JBrowse link
G Cib2 calcium and integrin binding family member 2 located_in IDA (MGI:5487486|PMID:23023331) UniProt PMID:23023331 MGI:5487486 NCBI chr 9:54,452,074...54,467,512
Ensembl chr 9:54,452,078...54,467,502 		JBrowse link
G Cnga1 cyclic nucleotide gated channel alpha 1 located_in IDA (PMID:10725384), (PMID:15634774), (PMID:20592197) MGI PMID:10725384 PMID:15634774 PMID:20592197 NCBI chr 5:72,761,039...72,800,095
Ensembl chr 5:72,761,039...72,801,618 		JBrowse link
G Cnga3 cyclic nucleotide gated channel alpha 3 located_in ISO
IDA		 (PMID:10813773)
(PMID:15634774)		 MGI PMID:10813773 PMID:15634774 NCBI chr 1:37,257,317...37,302,465
Ensembl chr 1:37,253,515...37,302,465 		JBrowse link
G Cngb1 cyclic nucleotide gated channel beta 1 is_active_in
located_in		 IBA
IDA		 (PMID:22183407) GO_Central
MGI		 PMID:22183407 GO_REF:0000033 NCBI chr 8:95,965,671...96,033,213
Ensembl chr 8:95,965,673...96,033,213 		JBrowse link
G Cngb3 cyclic nucleotide gated channel beta 3 is_active_in
located_in		 IBA
IDA		 (PMID:15634774) GO_Central
MGI		 PMID:15634774 GO_REF:0000033 NCBI chr 4:19,280,850...19,510,623
Ensembl chr 4:19,280,850...19,510,623 		JBrowse link
G Crb1 crumbs family member 1, photoreceptor morphogenesis associated located_in IDA (PMID:15316081) MGI PMID:15316081 NCBI chr 1:139,101,288...139,307,262
Ensembl chr 1:139,124,794...139,304,838 		JBrowse link
G Gnat1 G protein subunit alpha transducin 1 located_in ISO
IDA		 (MGI:6383261|PMID:31696965), (PMID:18367617), (PMID:20592197) MGI
RGD		 PMID:10396627 PMID:11931744 PMID:18367617 PMID:20592197 PMID:31696965 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 MGI:6383261 RGD:1599009 RGD:6893629 NCBI chr 9:107,551,636...107,556,833
Ensembl chr 9:107,551,673...107,556,911 		JBrowse link
G Gnat2 G protein subunit alpha transducin 2 located_in
is_active_in		 ISO
IBA		 MGI
GO_Central
RGD		 PMID:17591908 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:2302146 NCBI chr 3:107,994,120...108,008,748
Ensembl chr 3:108,000,105...108,008,748 		JBrowse link
G Gnat3 G protein subunit alpha transducin 3 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 5:18,167,568...18,224,666
Ensembl chr 5:18,167,547...18,224,832 		JBrowse link
G Gnb1 guanine nucleotide binding protein (G protein), beta 1 located_in IDA (PMID:18367617) MGI PMID:18367617 NCBI chr 4:155,575,514...155,643,726
Ensembl chr 4:155,575,818...155,643,726 		JBrowse link
G Gngt1 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 located_in ISO MGI
RGD		 PMID:10396627 PMID:11931744 GO_REF:0000096 MGI:4417868 RGD:1599009 RGD:6893629 NCBI chr 6:3,989,082...3,997,441
Ensembl chr 6:3,993,792...3,997,436 		JBrowse link
G Grk1 G protein-coupled receptor kinase 1 located_in IDA (PMID:22183407) MGI PMID:22183407 NCBI chr 8:13,455,081...13,471,951
Ensembl chr 8:13,455,081...13,471,951 		JBrowse link
G Guca1a guanylate cyclase activator 1a (retina) located_in ISO
IDA		 (PMID:22183407) MGI
RGD		 PMID:9620085 PMID:22183407 GO_REF:0000096 MGI:4417868 RGD:1599354 NCBI chr17:47,705,482...47,724,439
Ensembl chr17:47,705,483...47,711,509 		JBrowse link
G Guca1b guanylate cyclase activator 1B located_in ISO MGI
RGD		 PMID:9620085 GO_REF:0000096 MGI:4417868 RGD:1599354 NCBI chr17:47,692,526...47,703,892
Ensembl chr17:47,696,318...47,703,892 		JBrowse link
G Guca2b guanylate cyclase activator 2b (retina) located_in IDA (PMID:22183407) MGI PMID:22183407 NCBI chr 4:119,513,798...119,516,142
Ensembl chr 4:119,513,804...119,516,151 		JBrowse link
G Gucy2e guanylate cyclase 2e located_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:69,108,943...69,128,083
Ensembl chr11:69,108,943...69,127,862 		JBrowse link
G Hnf1a HNF1 homeobox A located_in IGI (PMID:10090727) MGI PMID:10090727 NCBI chr 5:115,087,039...115,109,121
Ensembl chr 5:115,087,039...115,109,153 		JBrowse link
G Ift20 intraflagellar transport 20 located_in IDA (PMID:21307337) MGI PMID:21307337 NCBI chr11:78,427,187...78,432,558
Ensembl chr11:78,427,187...78,432,563 		JBrowse link
G Inha inhibin alpha located_in ISO MGI
RGD		 PMID:7596220 GO_REF:0000096 MGI:4417868 RGD:2290440 NCBI chr 1:75,483,872...75,487,010
Ensembl chr 1:75,483,721...75,487,010 		JBrowse link
G Iqcb1 IQ calmodulin-binding motif containing 1 located_in IDA (MGI:3763297|PMID:15723066) HGNC-UCL PMID:15723066 MGI:3763297 NCBI chr16:36,648,722...36,694,044
Ensembl chr16:36,648,747...36,693,083 		JBrowse link
G Kif17 kinesin family member 17 located_in IDA (PMID:19384852) MGI PMID:19384852 NCBI chr 4:137,989,562...138,029,284
Ensembl chr 4:137,977,746...138,029,278 		JBrowse link
G Kifap3 kinesin-associated protein 3 located_in IDA (PMID:19384852) MGI PMID:19384852 NCBI chr 1:163,589,711...163,744,676
Ensembl chr 1:163,607,152...163,744,678 		JBrowse link
G Lyar Ly1 antibody reactive clone located_in IDA (MGI:6107438|PMID:25735755) UniProt PMID:25735755 MGI:6107438 NCBI chr 5:38,377,815...38,391,650
Ensembl chr 5:38,377,814...38,391,650 		JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 located_in IDA (MGI:5573004|PMID:24608321) UniProt PMID:24608321 MGI:5573004 NCBI chr 5:19,431,787...20,909,790
Ensembl chr 5:19,432,034...20,909,790 		JBrowse link
G Mak male germ cell-associated kinase located_in IDA (PMID:21148103) MGI PMID:21148103 NCBI chr13:41,178,483...41,233,182
Ensembl chr13:41,178,484...41,233,182 		JBrowse link
G Map1a microtubule-associated protein 1 A located_in IDA (PMID:24664738) MGI PMID:24664738 NCBI chr 2:121,119,608...121,141,313
Ensembl chr 2:121,120,081...121,141,313 		JBrowse link
G Map1b microtubule-associated protein 1B located_in IDA (PMID:24664738) MGI PMID:24664738 NCBI chr13:99,557,972...99,653,110
Ensembl chr13:99,557,954...99,653,048 		JBrowse link
G Mertk MER proto-oncogene tyrosine kinase located_in ISO MGI
RGD		 PMID:11861639 GO_REF:0000096 MGI:4417868 RGD:1299193 NCBI chr 2:128,540,836...128,645,082
Ensembl chr 2:128,540,876...128,644,814 		JBrowse link
G Myo3b myosin IIIB located_in IDA (PMID:19332056) MGI PMID:19332056 NCBI chr 2:69,869,464...70,259,542
Ensembl chr 2:69,869,470...70,259,542 		JBrowse link
G Myo5a myosin VA located_in IDA (PMID:14978221) MGI PMID:14978221 NCBI chr 9:74,975,183...75,130,970
Ensembl chr 9:74,978,297...75,130,970 		JBrowse link
G Myo7a myosin VIIA located_in
NOT|located_in		 ISO
IDA		 (PMID:8842737)
(MGI:81971|PMID:8842737)		 UniProt
UniProt		 PMID:8842737 MGI:81971 NCBI chr 7:97,700,261...97,768,730
Ensembl chr 7:97,700,267...97,768,731 		JBrowse link
G Myrip myosin VIIA and Rab interacting protein located_in IDA (MGI:2180422|PMID:11964381) UniProt PMID:11964381 MGI:2180422 NCBI chr 9:120,132,996...120,305,167
Ensembl chr 9:120,130,579...120,303,907 		JBrowse link
G Nup42 nucleoporin 42 located_in IDA (PMID:22183407) MGI PMID:22183407 NCBI chr 5:24,369,961...24,389,011
Ensembl chr 5:24,369,961...24,389,011 		JBrowse link
G Ocrl OCRL, inositol polyphosphate-5-phosphatase located_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:47,001,289...47,055,305
Ensembl chr  X:47,001,264...47,054,745 		JBrowse link
G Opn1mw opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan) located_in
is_active_in		 ISO
IDA
IBA		 (PMID:10725384), (PMID:12651948), (PMID:19332056), (PMID:23351594), (PMID:23386608) MGI
GO_Central
RGD		 PMID:10725384 PMID:12651948 PMID:19332056 PMID:20209167 PMID:23351594 More... GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:6893562 NCBI chr  X:73,171,072...73,194,362
Ensembl chr  X:73,171,070...73,194,366 		JBrowse link
G Opn1sw opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan) located_in
is_active_in		 ISO
IDA
IBA		 (PMID:10725384), (PMID:12651948), (PMID:19332056), (PMID:22183407), (PMID:23351594), (PMID:23386608), (PMID:26420485) MGI
GO_Central
RGD		 PMID:10725384 PMID:12651948 PMID:19332056 PMID:20209167 PMID:22183407 More... GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:6893562 NCBI chr 6:29,376,670...29,380,512
Ensembl chr 6:29,376,670...29,388,467 		JBrowse link
G Opn3 opsin 3 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 1:175,489,993...175,520,198
Ensembl chr 1:175,489,987...175,520,342 		JBrowse link
G Pcare photoreceptor cilium actin regulator is_active_in IBA GO_Central GO_REF:0000033 NCBI chr17:72,050,919...72,059,904
Ensembl chr17:72,050,550...72,059,889 		JBrowse link
G Pcdh15 protocadherin 15 located_in ISO
IDA		 (PMID:14570705) MGI PMID:14570705 GO_REF:0000119 MGI:4834177 NCBI chr10:72,932,003...74,485,663
Ensembl chr10:72,935,174...74,485,569 		JBrowse link
G Pdc phosducin is_active_in
located_in		 IBA
IDA		 (PMID:18367617) GO_Central
MGI		 PMID:18367617 GO_REF:0000033 NCBI chr 1:150,195,168...150,209,657
Ensembl chr 1:150,195,168...150,209,657 		JBrowse link
G Pde6b phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide located_in IDA (PMID:22183407) MGI PMID:22183407 NCBI chr 5:108,536,239...108,579,609
Ensembl chr 5:108,536,257...108,580,263 		JBrowse link
G Plekhb1 pleckstrin homology domain containing, family B (evectins) member 1 located_in TAS (MGI:3583854|PMID:15976448) UniProt PMID:15976448 MGI:3583854 NCBI chr 7:100,291,922...100,311,601
Ensembl chr 7:100,292,099...100,311,621 		JBrowse link
G Prcd photoreceptor disc component located_in IDA (MGI:5819338|PMID:23672200) HGNC PMID:23672200 MGI:5819338 NCBI chr11:116,544,603...116,559,224
Ensembl chr11:116,544,360...116,559,215 		JBrowse link
G Prom1 prominin 1 located_in IDA (MGI:3838023|PMID:19228982) UniProt PMID:19228982 MGI:3838023 NCBI chr 5:44,150,963...44,260,850
Ensembl chr 5:44,150,962...44,259,374 		JBrowse link
G Prph peripherin located_in IDA (PMID:22183407) MGI PMID:22183407 NCBI chr15:98,951,452...98,956,858
Ensembl chr15:98,953,055...98,956,859 		JBrowse link
G Prph2 peripherin 2 located_in IDA (PMID:22183407), (PMID:26420485), (PMID:28053051) MGI PMID:22183407 PMID:26420485 PMID:28053051 NCBI chr17:47,221,404...47,235,859
Ensembl chr17:47,221,385...47,235,859 		JBrowse link
G Ptgs1 prostaglandin-endoperoxide synthase 1 located_in IDA (PMID:12355421) MGI PMID:12355421 NCBI chr 2:36,106,758...36,142,287
Ensembl chr 2:36,120,438...36,142,284 		JBrowse link
G Ptprk protein tyrosine phosphatase receptor type K located_in IDA (PMID:18308476) MGI PMID:18308476 NCBI chr10:27,950,406...28,473,393
Ensembl chr10:27,950,816...28,473,393 		JBrowse link
G Rab27a RAB27A, member RAS oncogene family located_in IDA (MGI:2180422|PMID:11964381) UniProt PMID:11964381 MGI:2180422 NCBI chr 9:72,952,092...73,004,905
Ensembl chr 9:72,952,136...73,004,911 		JBrowse link
G Rapgef4 Rap guanine nucleotide exchange factor (GEF) 4 located_in ISO MGI
RGD		 PMID:19883736 GO_REF:0000096 MGI:4417868 RGD:2314691 NCBI chr 2:71,811,559...72,087,818
Ensembl chr 2:71,811,584...72,087,818 		JBrowse link
G Rd3 retinal degeneration 3 located_in IDA (MGI:6368063|PMID:29515371) UniProt PMID:29515371 MGI:6368063 NCBI chr 1:191,688,574...191,725,497
Ensembl chr 1:191,709,331...191,720,244 		JBrowse link
G Rho rhodopsin located_in
is_active_in		 ISO
IBA
IDA		 (PMID:10725384), (PMID:12651948), (PMID:20592197), (PMID:21212183), (PMID:22183407), (PMID:22869374), (PMID:23351594), (PMID:23943788), (PMID:25224828), (PMID:26420485)
(PMID:11773008), (PMID:23704327)		 MGI
GO_Central
RGD		 PMID:8814134 PMID:10725384 PMID:11773008 PMID:12651948 PMID:20592197 More... GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:6893595 NCBI chr 6:115,903,741...115,916,999
Ensembl chr 6:115,908,709...115,916,997 		JBrowse link
G Rom1 rod outer segment membrane protein 1 located_in IDA (PMID:20592197), (PMID:22183407), (PMID:26420485) MGI PMID:20592197 PMID:22183407 PMID:26420485 NCBI chr19:8,904,746...8,906,720
Ensembl chr19:8,904,755...8,906,720 		JBrowse link
G Rp1 retinitis pigmentosa 1 (human) located_in IDA (MGI:2676521|PMID:14507858), (MGI:3629826|PMID:15269252) UniProt PMID:14507858 PMID:15269252 MGI:2676521 MGI:3629826 NCBI chr 1:4,185,896...4,479,508
Ensembl chr 1:4,069,780...4,479,464 		JBrowse link
G Rp1l1 retinitis pigmentosa 1 homolog like 1 located_in IDA (MGI:4353917|PMID:19657028) UniProt PMID:19657028 MGI:4353917 NCBI chr14:64,229,880...64,270,955
Ensembl chr14:64,229,955...64,272,474 		JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator located_in
is_active_in		 ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr  X:10,024,455...10,083,034
Ensembl chr  X:9,939,860...10,083,159 		JBrowse link
G Rrh retinal pigment epithelium derived rhodopsin homolog is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 3:129,596,837...129,618,140
Ensembl chr 3:129,598,057...129,616,236 		JBrowse link
G Sag S-antigen, retina and pineal gland (arrestin) located_in
is_active_in		 ISO
IBA
IDA		 (PMID:22869374) MGI
GO_Central
RGD		 PMID:10396627 PMID:22869374 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:6893629 NCBI chr 1:87,731,402...87,772,880
Ensembl chr 1:87,731,402...87,772,880 		JBrowse link
G Shank2 SH3 and multiple ankyrin repeat domains 2 located_in IDA (MGI:5306573|PMID:19299912) BHF-UCL PMID:19299912 MGI:5306573 NCBI chr 7:143,531,819...143,979,780
Ensembl chr 7:143,555,665...143,978,231 		JBrowse link
G Stx3 syntaxin 3 located_in IMP (MGI:7258358|PMID:33974130) UniProt PMID:33974130 MGI:7258358 NCBI chr19:11,752,482...11,798,933
Ensembl chr19:11,752,482...11,796,767 		JBrowse link
G Tulp1 TUB like protein 1 located_in IDA (MGI:4397555|PMID:19218615) UniProt PMID:19218615 MGI:4397555 NCBI chr17:28,570,489...28,584,190
Ensembl chr17:28,570,489...28,584,196 		JBrowse link
G Ush1c USH1 protein network component harmonin located_in ISO
IDA		 (PMID:14578428), (PMID:17906286) RGD
MGI		 PMID:14578428 PMID:17906286 GO_REF:0000096 MGI:4417868 RGD:1303964 NCBI chr 7:45,844,774...45,887,984
Ensembl chr 7:45,844,774...45,887,927 		JBrowse link
photoreceptor outer segment membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdhr1 cadherin-related family member 1 located_in IDA (MGI:3814988|PMID:18654668) BHF-UCL PMID:18654668 MGI:3814988 NCBI chr14:36,799,806...36,820,304
Ensembl chr14:36,799,814...36,820,304 		JBrowse link
G Cnga1 cyclic nucleotide gated channel alpha 1 located_in IDA (MGI:3814988|PMID:18654668) BHF-UCL PMID:18654668 MGI:3814988 NCBI chr 5:72,761,039...72,800,095
Ensembl chr 5:72,761,039...72,801,618 		JBrowse link
G Gnb1 guanine nucleotide binding protein (G protein), beta 1 located_in ISO MGI
RGD		 PMID:11931744 GO_REF:0000096 MGI:4417868 RGD:1599009 NCBI chr 4:155,575,514...155,643,726
Ensembl chr 4:155,575,818...155,643,726 		JBrowse link
G Gucy2e guanylate cyclase 2e located_in ISO
IDA		 (MGI:5049799|PMID:21598940) MGI
UniProt		 PMID:21598940 GO_REF:0000096 MGI:4417868 MGI:5049799 NCBI chr11:69,108,943...69,128,083
Ensembl chr11:69,108,943...69,127,862 		JBrowse link
G Pde6a phosphodiesterase 6A, cGMP-specific, rod, alpha is_active_in IBA GO_Central GO_REF:0000033 NCBI chr18:61,353,546...61,426,698
Ensembl chr18:61,353,387...61,422,995 		JBrowse link
G Pde6b phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 5:108,536,239...108,579,609
Ensembl chr 5:108,536,257...108,580,263 		JBrowse link
G Pde6g phosphodiesterase 6G, cGMP-specific, rod, gamma is_active_in IBA GO_Central GO_REF:0000033 NCBI chr11:120,338,433...120,344,326
Ensembl chr11:120,338,431...120,344,326 		JBrowse link
G Pde6h phosphodiesterase 6H, cGMP-specific, cone, gamma is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 6:136,929,216...136,940,483
Ensembl chr 6:136,900,830...136,945,863 		JBrowse link
G Phlpp2 PH domain and leucine rich repeat protein phosphatase 2 located_in ISO RGD
MGI		 PMID:20089132 GO_REF:0000096 MGI:4417868 RGD:5131540 NCBI chr 8:110,595,149...110,671,303
Ensembl chr 8:110,595,174...110,671,303 		JBrowse link
G Prcd photoreceptor disc component located_in
is_active_in		 IDA
IBA
ISO		 (MGI:5812604|PMID:27613864), (MGI:6271388|PMID:27509380) UniProt
GO_Central
MGI		 PMID:27509380 PMID:27613864 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:5812604 MGI:6271388 NCBI chr11:116,544,603...116,559,224
Ensembl chr11:116,544,360...116,559,215 		JBrowse link
G Prom1 prominin 1 located_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:44,150,963...44,260,850
Ensembl chr 5:44,150,962...44,259,374 		JBrowse link
G Prph peripherin located_in IDA (PMID:10414956) MGI PMID:10414956 NCBI chr15:98,951,452...98,956,858
Ensembl chr15:98,953,055...98,956,859 		JBrowse link
G Rdh11 retinol dehydrogenase 11 NOT|located_in IDA (PMID:15790565) MGI PMID:15790565 NCBI chr12:79,221,007...79,238,629
Ensembl chr12:79,221,111...79,239,067 		JBrowse link
G Rho rhodopsin located_in ISO MGI
RGD		 PMID:2209754 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:6893561 NCBI chr 6:115,903,741...115,916,999
Ensembl chr 6:115,908,709...115,916,997 		JBrowse link
G Rom1 rod outer segment membrane protein 1 located_in IDA (MGI:3814988|PMID:18654668) BHF-UCL PMID:18654668 MGI:3814988 NCBI chr19:8,904,746...8,906,720
Ensembl chr19:8,904,755...8,906,720 		JBrowse link
photoreceptor proximal connecting cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cep290 centrosomal protein 290 located_in IDA (PMID:29899041) MGI PMID:29899041 NCBI chr10:100,323,410...100,409,527
Ensembl chr10:100,323,420...100,410,702 		JBrowse link
rod photoreceptor outer segment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a4 ATPase, Na+/K+ transporting, alpha 4 polypeptide located_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:172,051,075...172,085,991
Ensembl chr 1:172,051,080...172,085,981 		JBrowse link
G Cep290 centrosomal protein 290 is_active_in IGI (PMID:29899041) MGI PMID:29899041 NCBI chr10:100,323,410...100,409,527
Ensembl chr10:100,323,420...100,410,702 		JBrowse link
G Gucy2f guanylate cyclase 2f located_in IDA (MGI:4867355|PMID:21078983) UniProt PMID:21078983 MGI:4867355 NCBI chr  X:140,862,282...140,980,399
Ensembl chr  X:140,864,156...140,979,927 		JBrowse link
G Rd3 retinal degeneration 3 located_in IDA (MGI:4867355|PMID:21078983) UniProt PMID:21078983 MGI:4867355 NCBI chr 1:191,688,574...191,725,497
Ensembl chr 1:191,709,331...191,720,244 		JBrowse link
G Rho rhodopsin located_in IDA (PMID:19332056), (PMID:21444805), (PMID:23178122) MGI PMID:19332056 PMID:21444805 PMID:23178122 NCBI chr 6:115,903,741...115,916,999
Ensembl chr 6:115,908,709...115,916,997 		JBrowse link
G Spata7 spermatogenesis associated 7 is_active_in IMP
IBA
IGI		 (PMID:29899041) MGI
GO_Central		 PMID:29899041 GO_REF:0000033 NCBI chr12:98,594,169...98,636,078
Ensembl chr12:98,594,416...98,636,074 		JBrowse link
G Tmem237 transmembrane protein 237 located_in IDA (PMID:20375344) MGI PMID:20375344 NCBI chr 1:59,139,743...59,159,567
Ensembl chr 1:59,139,749...59,159,567 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 28585
    cellular anatomical entity 19619
      cell projection 2721
        plasma membrane bounded cell projection 2467
          cilium 815
            non-motile cilium 174
              9+0 non-motile cilium + 132
              9+2 non-motile cilium + 11
              non-motile cilium membrane 3
paths to the root