Ttll5 (tubulin tyrosine ligase-like family, member 5) - Rat Genome Database

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Gene: Ttll5 (tubulin tyrosine ligase-like family, member 5) Mus musculus
Analyze
Symbol: Ttll5
Name: tubulin tyrosine ligase-like family, member 5
RGD ID: 1620469
MGI Page MGI
Description: Enables tubulin-glutamic acid ligase activity. Acts upstream of or within fertilization and sperm axoneme assembly. Located in 9+0 non-motile cilium and ciliary basal body. Is expressed in brain and early embryo. Human ortholog(s) of this gene implicated in cone-rod dystrophy 19. Orthologous to human TTLL5 (tubulin tyrosine ligase like 5).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1700048H13Rik; 2310009M18Rik; 4930556H18Rik; AI428864; D630041K24Rik; mKIAA0998; polyglutamylase; R75373; ST; STAMP; tubulin polyglutamylase TTLL5; tubulin tyrosine ligase like family 5; tubulin--tyrosine ligase-like protein 5
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391285,871,417 - 86,100,534 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1285,871,433 - 86,108,667 (+)EnsemblGRCm39 Ensembl
GRCm381285,824,693 - 86,053,760 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1285,824,659 - 86,061,893 (+)EnsemblGRCm38mm10GRCm38
MGSCv371287,165,900 - 87,394,710 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361286,713,813 - 86,943,005 (+)NCBIMGSCv36mm8
Celera1287,285,084 - 87,513,908 (+)NCBICelera
Cytogenetic Map12D2NCBI
cM Map1239.81NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Mouse MP Annotation Import Pipeline RGD automated import pipeline
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12465718   PMID:12466851   PMID:12477932   PMID:14610273   PMID:16141072   PMID:16141073  
PMID:17499049   PMID:20530212   PMID:21267068   PMID:21677750   PMID:21873635   PMID:23558686   PMID:24791901   PMID:27162334   PMID:28173158   PMID:29593216   PMID:32290105   PMID:35404950  


Genomics

Comparative Map Data
Ttll5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391285,871,417 - 86,100,534 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1285,871,433 - 86,108,667 (+)EnsemblGRCm39 Ensembl
GRCm381285,824,693 - 86,053,760 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1285,824,659 - 86,061,893 (+)EnsemblGRCm38mm10GRCm38
MGSCv371287,165,900 - 87,394,710 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361286,713,813 - 86,943,005 (+)NCBIMGSCv36mm8
Celera1287,285,084 - 87,513,908 (+)NCBICelera
Cytogenetic Map12D2NCBI
cM Map1239.81NCBI
TTLL5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381475,661,246 - 75,955,079 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1475,633,625 - 75,955,079 (+)EnsemblGRCh38hg38GRCh38
GRCh371476,127,589 - 76,421,422 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361475,197,374 - 75,491,175 (+)NCBINCBI36Build 36hg18NCBI36
Build 341475,197,373 - 75,491,174NCBI
Celera1456,165,656 - 56,459,559 (+)NCBICelera
Cytogenetic Map14q24.3NCBI
HuRef1456,295,510 - 56,590,082 (+)NCBIHuRef
CHM1_11476,065,318 - 76,359,216 (+)NCBICHM1_1
T2T-CHM13v2.01469,870,350 - 70,164,265 (+)NCBIT2T-CHM13v2.0
Ttll5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86111,214,048 - 111,431,892 (+)NCBIGRCr8
mRatBN7.26105,483,091 - 105,700,920 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl6105,483,191 - 105,700,934 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.06109,693,915 - 109,910,479 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6109,710,781 - 109,879,607 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06119,000,540 - 119,218,774 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46109,947,608 - 110,142,062 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera6103,309,943 - 103,527,509 (+)NCBICelera
Cytogenetic Map6q31NCBI
Ttll5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955612109,743 - 353,918 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955612109,742 - 351,255 (+)NCBIChiLan1.0ChiLan1.0
TTLL5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21576,746,669 - 77,044,102 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11475,963,250 - 76,261,730 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01456,216,214 - 56,513,718 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11475,058,897 - 75,356,494 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1475,058,897 - 75,356,494 (+)Ensemblpanpan1.1panPan2
TTLL5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1848,651,766 - 48,920,733 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl848,651,814 - 48,920,039 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha848,334,692 - 48,603,370 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0848,875,966 - 49,144,988 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl848,876,026 - 49,145,790 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1848,548,799 - 48,817,529 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0848,570,236 - 48,839,457 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0848,966,471 - 49,235,573 (+)NCBIUU_Cfam_GSD_1.0
Ttll5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864027,084,218 - 27,345,683 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364884,724,909 - 4,983,318 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364884,723,314 - 4,983,926 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TTLL5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl798,823,871 - 99,130,915 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1798,822,338 - 99,090,076 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.27104,747,706 - 104,919,117 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TTLL5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12452,905,106 - 53,199,160 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2452,905,291 - 53,199,136 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605341,123,596 - 41,416,646 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ttll5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473425,740,347 - 26,021,519 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ttll5
6319 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:5780
Count of miRNA genes:933
Interacting mature miRNAs:1324
Transcripts:ENSMUST00000040179, ENSMUST00000040273, ENSMUST00000095536, ENSMUST00000110220, ENSMUST00000110224, ENSMUST00000124701, ENSMUST00000142411, ENSMUST00000153570, ENSMUST00000155448, ENSMUST00000175844, ENSMUST00000175899, ENSMUST00000176008, ENSMUST00000176460, ENSMUST00000176695, ENSMUST00000176937, ENSMUST00000177114, ENSMUST00000177168, ENSMUST00000177188, ENSMUST00000177525
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
27226797Scvln19_msacral vertebrae length 2, 16 week (mouse)126214678699466259Mouse
27226728Tibl20_mtibia length 20, 16 week (mouse)125914678693866774Mouse
1301337Cdcs8_mcytokine deficiency colitis susceptibility 8 (mouse)Not determined126468908398689229Mouse
1300633Cdcs7_mcytokine deficiency colitis susceptibility 7 (mouse)Not determined126468908398689229Mouse
4141738Tgq23_mtriglyceride QTL 23 (mouse)Not determined72112877106112877Mouse
1301492Dbsty3_mdiabesity 3 (mouse)Not determined1283532075117532224Mouse
27226793Feml10_mfemur length 10, 5 week (mouse)1268346774113363620Mouse
25823169Hrsq8_mhost response to SARS QTL 8, log titer (mouse)1281696245108495368Mouse
1301476Pbwg12_mpostnatal body weight growth 12 (mouse)Not determined126204016496040364Mouse
13207568Tcq14_mtotal cholesterol QTL 14 (mouse)121166000197176774Mouse
4141610Tailaq1_mtail length adjusted QTL 1 (mouse)Not determined80956708113383533Mouse
27226776Tibl6_mtibia length 6, 5 week (mouse)126064678692666774Mouse
27226771Tibl14_mtibia length 14, 10 week (mouse)126834677498766259Mouse
1301879Insq10_minsulin QTL 10 (mouse)Not determined1283532075117532224Mouse
4142002Tbqt3_mtibia bone quality traits 3 (mouse)Not determined1235285496109936243Mouse
13524842Ppiq10a_mprepulse inhibition QTL 10a (mouse)1277512220111512220Mouse
13524846Ppiq11_mprepulse inhibition QTL 11 (mouse)1282666396116666396Mouse
4142401Egq10_mearly growth QTL 10 (mouse)Not determined80956708113383533Mouse
1300883Ath21_matherosclerosis 21 (mouse)Not determined1285961579119961683Mouse
10043895Bw20_mbody weight QTL 20 (mouse)Not determined126230825296308252Mouse
14746976Manh73_mmandible shape 73 (mouse)126585713199857131Mouse
1301926Adip6_madiposity 6 (mouse)Not determined1273887422107887526Mouse
39128213Lwq23_mliver weight QTL 10 (mouse)1280956708113383533Mouse
1357749Vtbt13_mvertebral trabecular bone trait 13 (mouse)Not determined125313200287132145Mouse
10043948Pbft6_mpercent body fat 6 (mouse)Not determined126120542795205427Mouse
1301689Skull18_mskull morphology 18 (mouse)Not determined1273887422107887526Mouse
1301046Par3_mpulmonary adenoma resistance 3 (mouse)Not determined126395670897956883Mouse
4141335W6q10_mweight 6 weeks QTL 10 (mouse)Not determined80956708113383533Mouse
1357479Splwt1_mspleen weight 1 (mouse)Not determined124169317590887526Mouse
1357757Lnopy2_mlens opacity 2 (mouse)Not determined125284662686846796Mouse
13524849Ppiq11a_mprepulse inhibition QTL 11a (mouse)1280989143114989143Mouse

Markers in Region
RH128259  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381286,053,510 - 86,053,725UniSTSGRCm38
MGSCv371287,394,460 - 87,394,675UniSTSGRCm37
Celera1287,513,658 - 87,513,873UniSTS
Cytogenetic Map12D3UniSTS
R75373  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381286,053,589 - 86,053,702UniSTSGRCm38
MGSCv371287,394,539 - 87,394,652UniSTSGRCm37
Celera1287,513,737 - 87,513,850UniSTS
Cytogenetic Map12D3UniSTS
Whitehead_YAC12 UniSTS
AI428864  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381286,053,508 - 86,053,637UniSTSGRCm38
MGSCv371287,394,458 - 87,394,587UniSTSGRCm37
Celera1287,513,656 - 87,513,785UniSTS
Cytogenetic Map12D3UniSTS
Whitehead/MRC_RH12810.64UniSTS
RH125218  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381286,053,590 - 86,053,727UniSTSGRCm38
MGSCv371287,394,540 - 87,394,677UniSTSGRCm37
Celera1287,513,738 - 87,513,875UniSTS
Cytogenetic Map12D3UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001081423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001347395 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001364624 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001364625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001364626 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001364627 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001364628 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001364630 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006515989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006515990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006515991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006515992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006515994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006515995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006515996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006515999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006516001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006516004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006516006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006516007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017315109 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017315110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017315112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017315114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246773 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246774 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246775 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001780460 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001780461 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004937517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004937518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB093278 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC134328 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC138303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK006726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009255 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK016145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK028083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK029125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK031470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK046017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK047973 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK085566 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AM690748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC030360 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC035276 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ031122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY140783 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000040179   ⟹   ENSMUSP00000048809
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,871,484 - 86,100,534 (+)Ensembl
GRCm38.p6 Ensembl1285,824,710 - 86,053,760 (+)Ensembl
RefSeq Acc Id: ENSMUST00000040273   ⟹   ENSMUSP00000039939
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,871,743 - 86,099,982 (+)Ensembl
GRCm38.p6 Ensembl1285,824,969 - 86,053,208 (+)Ensembl
RefSeq Acc Id: ENSMUST00000095536   ⟹   ENSMUSP00000093192
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,871,447 - 85,941,519 (+)Ensembl
GRCm38.p6 Ensembl1285,824,673 - 85,894,745 (+)Ensembl
RefSeq Acc Id: ENSMUST00000110220   ⟹   ENSMUSP00000105849
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,871,481 - 85,931,212 (+)Ensembl
GRCm38.p6 Ensembl1285,824,707 - 85,884,438 (+)Ensembl
RefSeq Acc Id: ENSMUST00000110224   ⟹   ENSMUSP00000105853
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,871,752 - 86,100,533 (+)Ensembl
GRCm38.p6 Ensembl1285,824,978 - 86,053,759 (+)Ensembl
RefSeq Acc Id: ENSMUST00000124701
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,871,795 - 85,892,456 (+)Ensembl
GRCm38.p6 Ensembl1285,825,021 - 85,845,682 (+)Ensembl
RefSeq Acc Id: ENSMUST00000142411   ⟹   ENSMUSP00000122530
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,871,759 - 85,890,561 (+)Ensembl
GRCm38.p6 Ensembl1285,824,985 - 85,843,787 (+)Ensembl
RefSeq Acc Id: ENSMUST00000153570   ⟹   ENSMUSP00000135139
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,871,795 - 85,896,091 (+)Ensembl
GRCm38.p6 Ensembl1285,825,021 - 85,849,317 (+)Ensembl
RefSeq Acc Id: ENSMUST00000155448   ⟹   ENSMUSP00000134971
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,871,849 - 86,100,533 (+)Ensembl
GRCm38.p6 Ensembl1285,825,075 - 86,053,759 (+)Ensembl
RefSeq Acc Id: ENSMUST00000175844   ⟹   ENSMUSP00000134934
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,986,163 - 86,108,667 (+)Ensembl
GRCm38.p6 Ensembl1285,939,389 - 86,061,893 (+)Ensembl
RefSeq Acc Id: ENSMUST00000175899
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,925,760 - 85,938,973 (+)Ensembl
GRCm38.p6 Ensembl1285,878,986 - 85,892,199 (+)Ensembl
RefSeq Acc Id: ENSMUST00000176008
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,871,752 - 85,916,830 (+)Ensembl
GRCm38.p6 Ensembl1285,824,978 - 85,870,056 (+)Ensembl
RefSeq Acc Id: ENSMUST00000176460   ⟹   ENSMUSP00000135279
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,959,334 - 85,976,713 (+)Ensembl
GRCm38.p6 Ensembl1285,912,560 - 85,929,939 (+)Ensembl
RefSeq Acc Id: ENSMUST00000176695   ⟹   ENSMUSP00000135852
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,871,742 - 86,062,826 (+)Ensembl
GRCm38.p6 Ensembl1285,824,968 - 86,016,052 (+)Ensembl
RefSeq Acc Id: ENSMUST00000176937   ⟹   ENSMUSP00000135730
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,969,782 - 86,059,574 (+)Ensembl
GRCm38.p6 Ensembl1285,923,008 - 86,012,800 (+)Ensembl
RefSeq Acc Id: ENSMUST00000177114   ⟹   ENSMUSP00000135395
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,873,258 - 86,099,983 (+)Ensembl
GRCm38.p6 Ensembl1285,826,484 - 86,053,209 (+)Ensembl
RefSeq Acc Id: ENSMUST00000177168   ⟹   ENSMUSP00000134874
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,964,553 - 86,100,533 (+)Ensembl
GRCm38.p6 Ensembl1285,917,779 - 86,053,759 (+)Ensembl
RefSeq Acc Id: ENSMUST00000177188   ⟹   ENSMUSP00000134928
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,871,433 - 85,904,179 (+)Ensembl
GRCm38.p6 Ensembl1285,824,659 - 85,857,405 (+)Ensembl
RefSeq Acc Id: ENSMUST00000177525   ⟹   ENSMUSP00000135712
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,979,556 - 86,100,533 (+)Ensembl
GRCm38.p6 Ensembl1285,932,782 - 86,053,759 (+)Ensembl
RefSeq Acc Id: ENSMUST00000220906
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1286,008,775 - 86,100,296 (+)Ensembl
GRCm38.p6 Ensembl1285,962,001 - 86,053,522 (+)Ensembl
RefSeq Acc Id: NM_001081423   ⟹   NP_001074892
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,694 - 86,100,534 (+)NCBI
GRCm381285,824,920 - 86,053,760 (+)NCBI
MGSCv371287,165,900 - 87,394,710 (+)RGD
Celera1287,285,084 - 87,513,908 (+)RGD
cM Map12 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001347395   ⟹   NP_001334324
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,694 - 86,100,534 (+)NCBI
GRCm381285,824,920 - 86,053,760 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001364624   ⟹   NP_001351553
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,694 - 86,100,534 (+)NCBI
GRCm381285,824,920 - 86,053,760 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001364625   ⟹   NP_001351554
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,694 - 86,100,534 (+)NCBI
GRCm381285,824,920 - 86,053,760 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001364626   ⟹   NP_001351555
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,694 - 86,100,534 (+)NCBI
GRCm381285,824,920 - 86,053,760 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001364627   ⟹   NP_001351556
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,694 - 86,100,534 (+)NCBI
GRCm381285,824,920 - 86,053,760 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001364628   ⟹   NP_001351557
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,694 - 86,100,534 (+)NCBI
GRCm381285,824,920 - 86,053,760 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001364630   ⟹   NP_001351559
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,694 - 86,100,534 (+)NCBI
GRCm381285,824,920 - 86,053,760 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006515989   ⟹   XP_006516052
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,417 - 86,100,534 (+)NCBI
GRCm381285,824,693 - 86,053,760 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006515990   ⟹   XP_006516053
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,705 - 86,091,975 (+)NCBI
GRCm381285,824,968 - 86,045,201 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006515991   ⟹   XP_006516054
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,792 - 86,100,534 (+)NCBI
GRCm381285,824,974 - 86,053,760 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006515992   ⟹   XP_006516055
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,705 - 86,100,534 (+)NCBI
GRCm381285,824,968 - 86,053,760 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006515994   ⟹   XP_006516057
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,705 - 86,100,534 (+)NCBI
GRCm381285,824,968 - 86,053,760 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006515995   ⟹   XP_006516058
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,705 - 86,100,534 (+)NCBI
GRCm381285,824,968 - 86,053,760 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006515996   ⟹   XP_006516059
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,705 - 86,100,534 (+)NCBI
GRCm381285,824,968 - 86,053,760 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006515999   ⟹   XP_006516062
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,772 - 86,100,534 (+)NCBI
GRCm381285,824,974 - 86,053,760 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006516001   ⟹   XP_006516064
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,930,084 - 86,100,534 (+)NCBI
GRCm381285,879,368 - 86,053,760 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006516004   ⟹   XP_006516067
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,911,348 - 86,100,534 (+)NCBI
GRCm381285,899,019 - 86,053,760 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006516006   ⟹   XP_006516069
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,964,459 - 86,100,534 (+)NCBI
GRCm381285,917,685 - 86,053,760 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006516007   ⟹   XP_006516070
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,945,767 - 86,100,534 (+)NCBI
GRCm381285,898,993 - 86,053,760 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017315109   ⟹   XP_017170598
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,705 - 86,100,534 (+)NCBI
GRCm381285,824,968 - 86,053,760 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017315110   ⟹   XP_017170599
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,705 - 86,100,534 (+)NCBI
GRCm381285,824,968 - 86,053,760 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017315112   ⟹   XP_017170601
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,772 - 86,100,534 (+)NCBI
GRCm381285,824,968 - 86,053,760 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017315114   ⟹   XP_017170603
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,705 - 85,965,702 (+)NCBI
GRCm381285,824,968 - 85,918,928 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030246773   ⟹   XP_030102633
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,705 - 86,089,609 (+)NCBI
GRCm381285,824,968 - 86,027,350 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030246774   ⟹   XP_030102634
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,417 - 86,100,534 (+)NCBI
GRCm381285,824,693 - 86,053,760 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030246775   ⟹   XP_030102635
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,772 - 86,100,534 (+)NCBI
GRCm381285,824,974 - 86,053,760 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036157495   ⟹   XP_036013388
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,705 - 86,089,609 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036157496   ⟹   XP_036013389
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,705 - 86,089,609 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036157497   ⟹   XP_036013390
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,792 - 86,100,534 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036157498   ⟹   XP_036013391
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,705 - 86,100,534 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036157500   ⟹   XP_036013393
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,705 - 86,091,992 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036157501   ⟹   XP_036013394
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,705 - 85,972,554 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001780460
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,705 - 85,979,518 (+)NCBI
GRCm381285,824,968 - 85,932,744 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001780461
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,705 - 85,973,620 (+)NCBI
GRCm381285,824,968 - 85,926,846 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004937517
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,705 - 86,100,534 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004937518
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,871,705 - 86,100,534 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001074892 (Get FASTA)   NCBI Sequence Viewer  
  NP_001334324 (Get FASTA)   NCBI Sequence Viewer  
  NP_001351553 (Get FASTA)   NCBI Sequence Viewer  
  NP_001351554 (Get FASTA)   NCBI Sequence Viewer  
  NP_001351555 (Get FASTA)   NCBI Sequence Viewer  
  NP_001351556 (Get FASTA)   NCBI Sequence Viewer  
  NP_001351557 (Get FASTA)   NCBI Sequence Viewer  
  NP_001351559 (Get FASTA)   NCBI Sequence Viewer  
  XP_006516052 (Get FASTA)   NCBI Sequence Viewer  
  XP_006516053 (Get FASTA)   NCBI Sequence Viewer  
  XP_006516054 (Get FASTA)   NCBI Sequence Viewer  
  XP_006516055 (Get FASTA)   NCBI Sequence Viewer  
  XP_006516057 (Get FASTA)   NCBI Sequence Viewer  
  XP_006516058 (Get FASTA)   NCBI Sequence Viewer  
  XP_006516059 (Get FASTA)   NCBI Sequence Viewer  
  XP_006516062 (Get FASTA)   NCBI Sequence Viewer  
  XP_006516064 (Get FASTA)   NCBI Sequence Viewer  
  XP_006516067 (Get FASTA)   NCBI Sequence Viewer  
  XP_006516069 (Get FASTA)   NCBI Sequence Viewer  
  XP_006516070 (Get FASTA)   NCBI Sequence Viewer  
  XP_017170598 (Get FASTA)   NCBI Sequence Viewer  
  XP_017170599 (Get FASTA)   NCBI Sequence Viewer  
  XP_017170601 (Get FASTA)   NCBI Sequence Viewer  
  XP_017170603 (Get FASTA)   NCBI Sequence Viewer  
  XP_030102633 (Get FASTA)   NCBI Sequence Viewer  
  XP_030102634 (Get FASTA)   NCBI Sequence Viewer  
  XP_030102635 (Get FASTA)   NCBI Sequence Viewer  
  XP_036013388 (Get FASTA)   NCBI Sequence Viewer  
  XP_036013389 (Get FASTA)   NCBI Sequence Viewer  
  XP_036013390 (Get FASTA)   NCBI Sequence Viewer  
  XP_036013391 (Get FASTA)   NCBI Sequence Viewer  
  XP_036013393 (Get FASTA)   NCBI Sequence Viewer  
  XP_036013394 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH30360 (Get FASTA)   NCBI Sequence Viewer  
  AAH35276 (Get FASTA)   NCBI Sequence Viewer  
  BAB24715 (Get FASTA)   NCBI Sequence Viewer  
  BAB30125 (Get FASTA)   NCBI Sequence Viewer  
  BAC25741 (Get FASTA)   NCBI Sequence Viewer  
  BAC26310 (Get FASTA)   NCBI Sequence Viewer  
  BAC39474 (Get FASTA)   NCBI Sequence Viewer  
  BAC41462 (Get FASTA)   NCBI Sequence Viewer  
  BAE43213 (Get FASTA)   NCBI Sequence Viewer  
  CAM84325 (Get FASTA)   NCBI Sequence Viewer  
  EDL02884 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000039939
  ENSMUSP00000039939.7
  ENSMUSP00000048809
  ENSMUSP00000048809.8
  ENSMUSP00000093192.4
  ENSMUSP00000105849.3
  ENSMUSP00000105853
  ENSMUSP00000105853.2
  ENSMUSP00000122530.3
  ENSMUSP00000134874
  ENSMUSP00000134874.2
  ENSMUSP00000134928.2
  ENSMUSP00000134934.2
  ENSMUSP00000134971
  ENSMUSP00000134971.2
  ENSMUSP00000135139.2
  ENSMUSP00000135279.2
  ENSMUSP00000135395.2
  ENSMUSP00000135712.2
  ENSMUSP00000135730.2
  ENSMUSP00000135852.2
GenBank Protein Q8CHB8 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_001074892   ⟸   NM_001081423
- Peptide Label: isoform 1
- UniProtKB: Q8CFV5 (UniProtKB/Swiss-Prot),   Q8C1F0 (UniProtKB/Swiss-Prot),   Q3V468 (UniProtKB/Swiss-Prot),   A4Q9E7 (UniProtKB/Swiss-Prot),   Q9CVS6 (UniProtKB/Swiss-Prot),   Q8CHB8 (UniProtKB/Swiss-Prot),   D3YVZ5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006516052   ⟸   XM_006515989
- Peptide Label: isoform X1
- UniProtKB: D3YVZ5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006516058   ⟸   XM_006515995
- Peptide Label: isoform X6
- UniProtKB: D3YVZ5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006516059   ⟸   XM_006515996
- Peptide Label: isoform X7
- UniProtKB: D3YVZ5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006516055   ⟸   XM_006515992
- Peptide Label: isoform X2
- UniProtKB: D3YVZ5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006516057   ⟸   XM_006515994
- Peptide Label: isoform X5
- UniProtKB: D3YVZ5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006516053   ⟸   XM_006515990
- Peptide Label: isoform X1
- UniProtKB: D3YVZ5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006516054   ⟸   XM_006515991
- Peptide Label: isoform X1
- UniProtKB: D3YVZ5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006516062   ⟸   XM_006515999
- Peptide Label: isoform X11
- UniProtKB: D3YVZ5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006516064   ⟸   XM_006516001
- Peptide Label: isoform X13
- Sequence:
RefSeq Acc Id: XP_006516067   ⟸   XM_006516004
- Peptide Label: isoform X14
- UniProtKB: H3BJ73 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006516069   ⟸   XM_006516006
- Peptide Label: isoform X15
- UniProtKB: H3BJ73 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006516070   ⟸   XM_006516007
- Peptide Label: isoform X15
- UniProtKB: H3BJ73 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017170598   ⟸   XM_017315109
- Peptide Label: isoform X8
- UniProtKB: D3YVZ5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017170599   ⟸   XM_017315110
- Peptide Label: isoform X10
- UniProtKB: D3YVZ5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017170601   ⟸   XM_017315112
- Peptide Label: isoform X12
- UniProtKB: D3YVZ5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017170603   ⟸   XM_017315114
- Peptide Label: isoform X17
- Sequence:
RefSeq Acc Id: XP_030102634   ⟸   XM_030246774
- Peptide Label: isoform X3
- UniProtKB: Q8CHB8 (UniProtKB/Swiss-Prot),   Q8CFV5 (UniProtKB/Swiss-Prot),   Q8C1F0 (UniProtKB/Swiss-Prot),   Q3V468 (UniProtKB/Swiss-Prot),   A4Q9E7 (UniProtKB/Swiss-Prot),   Q9CVS6 (UniProtKB/Swiss-Prot),   D3YVZ5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001351556   ⟸   NM_001364627
- Peptide Label: isoform 6
- UniProtKB: D3YVZ5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001351554   ⟸   NM_001364625
- Peptide Label: isoform 4
- UniProtKB: D3YVZ5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001334324   ⟸   NM_001347395
- Peptide Label: isoform 2
- UniProtKB: E9Q425 (UniProtKB/TrEMBL),   D3YVZ5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001351555   ⟸   NM_001364626
- Peptide Label: isoform 5
- UniProtKB: D3YVZ5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001351553   ⟸   NM_001364624
- Peptide Label: isoform 3
- UniProtKB: D3YVZ5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001351559   ⟸   NM_001364630
- Peptide Label: isoform 8
- UniProtKB: H3BJ73 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001351557   ⟸   NM_001364628
- Peptide Label: isoform 7
- UniProtKB: D3YVZ5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030102633   ⟸   XM_030246773
- Peptide Label: isoform X3
- UniProtKB: Q8CHB8 (UniProtKB/Swiss-Prot),   Q8CFV5 (UniProtKB/Swiss-Prot),   Q8C1F0 (UniProtKB/Swiss-Prot),   Q3V468 (UniProtKB/Swiss-Prot),   A4Q9E7 (UniProtKB/Swiss-Prot),   Q9CVS6 (UniProtKB/Swiss-Prot),   D3YVZ5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030102635   ⟸   XM_030246775
- Peptide Label: isoform X12
- UniProtKB: D3YVZ5 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000105849   ⟸   ENSMUST00000110220
RefSeq Acc Id: ENSMUSP00000105853   ⟸   ENSMUST00000110224
RefSeq Acc Id: ENSMUSP00000135395   ⟸   ENSMUST00000177114
RefSeq Acc Id: ENSMUSP00000134928   ⟸   ENSMUST00000177188
RefSeq Acc Id: ENSMUSP00000134874   ⟸   ENSMUST00000177168
RefSeq Acc Id: ENSMUSP00000135712   ⟸   ENSMUST00000177525
RefSeq Acc Id: ENSMUSP00000048809   ⟸   ENSMUST00000040179
RefSeq Acc Id: ENSMUSP00000039939   ⟸   ENSMUST00000040273
RefSeq Acc Id: ENSMUSP00000093192   ⟸   ENSMUST00000095536
RefSeq Acc Id: ENSMUSP00000135139   ⟸   ENSMUST00000153570
RefSeq Acc Id: ENSMUSP00000135730   ⟸   ENSMUST00000176937
RefSeq Acc Id: ENSMUSP00000122530   ⟸   ENSMUST00000142411
RefSeq Acc Id: ENSMUSP00000135279   ⟸   ENSMUST00000176460
RefSeq Acc Id: ENSMUSP00000135852   ⟸   ENSMUST00000176695
RefSeq Acc Id: ENSMUSP00000134934   ⟸   ENSMUST00000175844
RefSeq Acc Id: ENSMUSP00000134971   ⟸   ENSMUST00000155448
RefSeq Acc Id: XP_036013391   ⟸   XM_036157498
- Peptide Label: isoform X9
- UniProtKB: D3YVZ5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036013393   ⟸   XM_036157500
- Peptide Label: isoform X9
- UniProtKB: D3YVZ5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036013388   ⟸   XM_036157495
- Peptide Label: isoform X1
- UniProtKB: D3YVZ5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036013389   ⟸   XM_036157496
- Peptide Label: isoform X4
- UniProtKB: D3YVZ5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036013394   ⟸   XM_036157501
- Peptide Label: isoform X16
RefSeq Acc Id: XP_036013390   ⟸   XM_036157497
- Peptide Label: isoform X3
- UniProtKB: Q8CHB8 (UniProtKB/Swiss-Prot),   Q8CFV5 (UniProtKB/Swiss-Prot),   Q8C1F0 (UniProtKB/Swiss-Prot),   Q3V468 (UniProtKB/Swiss-Prot),   A4Q9E7 (UniProtKB/Swiss-Prot),   Q9CVS6 (UniProtKB/Swiss-Prot),   D3YVZ5 (UniProtKB/TrEMBL)
Protein Domains
TTL

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8CHB8-F1-model_v2 AlphaFold Q8CHB8 1-1328 view protein structure

Promoters
RGD ID:8678846
Promoter ID:EPDNEW_M17454
Type:initiation region
Name:Ttll5_3
Description:Mus musculus tubulin tyrosine ligase-like family, member 5 ,transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M17455  EPDNEW_M17456  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381285,824,686 - 85,824,746EPDNEW
RGD ID:8678848
Promoter ID:EPDNEW_M17455
Type:initiation region
Name:Ttll5_1
Description:Mus musculus tubulin tyrosine ligase-like family, member 5 ,transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M17454  EPDNEW_M17456  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381285,824,933 - 85,824,993EPDNEW
RGD ID:8678850
Promoter ID:EPDNEW_M17456
Type:multiple initiation site
Name:Ttll5_2
Description:Mus musculus tubulin tyrosine ligase-like family, member 5 ,transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M17454  EPDNEW_M17455  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381285,825,198 - 85,825,258EPDNEW
RGD ID:6823362
Promoter ID:MM_KWN:12217
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000040273,   ENSMUST00000095536,   ENSMUST00000110219,   ENSMUST00000110220,   ENSMUST00000110222,   ENSMUST00000110224,   OTTMUST00000055066,   OTTMUST00000055070,   OTTMUST00000055208,   OTTMUST00000081014,   OTTMUST00000081015,   OTTMUST00000081016,   OTTMUST00000081018,   UC007OHH.1,   UC007OHJ.1,   UC007OHK.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361287,165,399 - 87,165,899 (-)MPROMDB
RGD ID:6847019
Promoter ID:MM_ACW:11510
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:MEF_B4,   MEF_B6
Transcripts:TTLL5.ISEP07,   TTLL5.JSEP07,   TTLL5.KSEP07,   TTLL5.NSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361287,300,939 - 87,301,439 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2443657 AgrOrtholog
Ensembl Genes ENSMUSG00000012609 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000040179 ENTREZGENE
  ENSMUST00000040179.14 UniProtKB/Swiss-Prot
  ENSMUST00000040273 ENTREZGENE
  ENSMUST00000040273.14 UniProtKB/TrEMBL
  ENSMUST00000095536.10 UniProtKB/TrEMBL
  ENSMUST00000110220.9 UniProtKB/TrEMBL
  ENSMUST00000110224 ENTREZGENE
  ENSMUST00000110224.8 UniProtKB/TrEMBL
  ENSMUST00000142411.9 UniProtKB/TrEMBL
  ENSMUST00000153570.9 UniProtKB/TrEMBL
  ENSMUST00000155448 ENTREZGENE
  ENSMUST00000155448.9 UniProtKB/Swiss-Prot
  ENSMUST00000175844.2 UniProtKB/TrEMBL
  ENSMUST00000176460.8 UniProtKB/TrEMBL
  ENSMUST00000176695.8 UniProtKB/TrEMBL
  ENSMUST00000176937.8 UniProtKB/TrEMBL
  ENSMUST00000177114 ENTREZGENE
  ENSMUST00000177114.2 UniProtKB/TrEMBL
  ENSMUST00000177168 ENTREZGENE
  ENSMUST00000177168.8 UniProtKB/TrEMBL
  ENSMUST00000177188.8 UniProtKB/TrEMBL
  ENSMUST00000177525.8 UniProtKB/TrEMBL
Gene3D-CATH ATP-grasp fold, B domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro TTL/TTLL_fam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:320244 UniProtKB/Swiss-Prot
MGD MGI:2443657 ENTREZGENE
NCBI Gene 320244 ENTREZGENE
PANTHER TUBULIN POLYGLUTAMYLASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TUBULIN POLYGLUTAMYLASE TTLL5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam TTL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ttll5 PhenoGen
PROSITE TTL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Glutathione synthetase ATP-binding domain-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A4Q9E7 ENTREZGENE
  D3YVZ5 ENTREZGENE, UniProtKB/TrEMBL
  D3Z5H9_MOUSE UniProtKB/TrEMBL
  E9Q425 ENTREZGENE, UniProtKB/TrEMBL
  H3BJ73 ENTREZGENE, UniProtKB/TrEMBL
  H3BJC2_MOUSE UniProtKB/TrEMBL
  H3BJC7_MOUSE UniProtKB/TrEMBL
  H3BJV4_MOUSE UniProtKB/TrEMBL
  H3BK74_MOUSE UniProtKB/TrEMBL
  H3BLA3_MOUSE UniProtKB/TrEMBL
  H3BLC0_MOUSE UniProtKB/TrEMBL
  H3BLN3_MOUSE UniProtKB/TrEMBL
  Q3V468 ENTREZGENE
  Q8BUF0_MOUSE UniProtKB/TrEMBL
  Q8C125_MOUSE UniProtKB/TrEMBL
  Q8C1F0 ENTREZGENE
  Q8CFV5 ENTREZGENE
  Q8CHB8 ENTREZGENE
  Q8K0U6_MOUSE UniProtKB/TrEMBL
  Q9CVS6 ENTREZGENE
  Q9D4U8_MOUSE UniProtKB/TrEMBL
  TTLL5_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary A4Q9E7 UniProtKB/Swiss-Prot
  Q3V468 UniProtKB/Swiss-Prot
  Q8C1F0 UniProtKB/Swiss-Prot
  Q8CFV5 UniProtKB/Swiss-Prot
  Q9CVS6 UniProtKB/Swiss-Prot