Cep290 (centrosomal protein 290) - Rat Genome Database
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Gene: Cep290 (centrosomal protein 290) Mus musculus
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Symbol: Cep290
Name: centrosomal protein 290
RGD ID: 1323204
Description: Predicted to have identical protein binding activity. Involved in several processes, including animal organ development; cilium assembly; and photoreceptor cell maintenance. Localizes to MKS complex; centriolar satellite; and photoreceptor cell cilium. Predicted to colocalize with gamma-tubulin complex. Used to study Joubert syndrome 5; Leber congenital amaurosis 10; cystic kidney disease; and visceral heterotaxy. Human ortholog(s) of this gene implicated in Bardet-Biedl syndrome 14; Joubert syndrome 5; Leber congenital amaurosis 10; Meckel syndrome 4; and Senior-Loken syndrome. Orthologous to human CEP290 (centrosomal protein 290); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 4-hydroxynon-2-enal; carbon nanotube.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: b2b1454C; b2b1454Clo; b2b1752C; b2b1752Clo; Bardet-Biedl syndrome 14 protein homolog; BC004690; centrosomal protein of 290 kDa; MGC7859; nephrocystin-6; Np; Nphp6
Orthologs:
Homo sapiens (human) : CEP290 (centrosomal protein 290)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Cep290 (centrosomal protein 290)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cep290 (centrosomal protein 290)
Pan paniscus (bonobo/pygmy chimpanzee) : CEP290 (centrosomal protein 290)
Canis lupus familiaris (dog) : CEP290 (centrosomal protein 290)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cep290 (centrosomal protein 290)
Sus scrofa (pig) : CEP290 (centrosomal protein 290)
Chlorocebus sabaeus (African green monkey) : CEP290 (centrosomal protein 290)
Heterocephalus glaber (naked mole-rat) : Cep290 (centrosomal protein 290)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910100,323,410 - 100,411,533 (+)NCBI
GRCm3810100,487,548 - 100,575,671 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10100,487,558 - 100,574,840 (+)EnsemblGRCm38mm10GRCm38
MGSCv371099,950,923 - 100,036,289 (+)NCBIGRCm37mm9NCBIm37
Celera10102,420,230 - 102,505,600 (+)NCBICelera
Cytogenetic Map10D1NCBI
cM Map1051.48NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal cell morphology  (IAGP)
abnormal cell nucleus morphology  (IAGP)
abnormal cerebellum morphology  (IAGP)
abnormal cerebellum vermis morphology  (IAGP)
abnormal cerebral hemisphere morphology  (IAGP)
abnormal cone electrophysiology  (IAGP)
abnormal DNA replication  (IAGP)
abnormal double-strand DNA break repair  (IAGP)
abnormal inferior vena cava morphology  (IEA)
abnormal kidney collecting duct morphology  (IAGP)
abnormal olfactory epithelium morphology  (IAGP)
abnormal photoreceptor outer segment morphology  (IAGP)
abnormal renal tubule epithelial cell primary cilium morphology  (IAGP)
abnormal retinal photoreceptor morphology  (IAGP)
abnormal retinal pigment epithelium morphology  (IAGP)
abnormal rod electrophysiology  (IAGP)
absent kidney epithelial cell primary cilium  (IAGP)
accessory spleen  (IEA)
anosmia  (IAGP)
atrial septal defect  (IEA)
atrioventricular septal defect  (IEA)
d-loop transposition of the great arteries  (IEA)
decreased body size  (IAGP)
double outlet right ventricle  (IEA)
dual inferior vena cava  (IEA)
female infertility  (IEA)
heterotaxia  (IEA)
hydrocephaly  (IAGP)
inlet ventricular septal defect  (IEA)
kidney cortex cysts  (IAGP)
kidney cysts  (IAGP)
left-sided isomerism  (IEA)
male infertility  (IEA)
micrognathia  (IEA)
no abnormal phenotype detected  (IAGP)
photoreceptor inner segment degeneration  (IAGP)
photoreceptor outer segment degeneration  (IAGP)
polycystic kidney  (IEA)
polydipsia  (IAGP)
polyuria  (IAGP)
prenatal lethality, incomplete penetrance  (IAGP)
reduced cerebellar foliation  (IAGP)
renal glomerulus cysts  (IEA)
retinal cone cell degeneration  (IAGP)
retinal degeneration  (IAGP)
retinal outer nuclear layer degeneration  (IAGP)
retinal photoreceptor degeneration  (IAGP)
retinal rod cell degeneration  (IAGP)
retinal spots  (IAGP)
short photoreceptor outer segment  (IAGP)
slow postnatal weight gain  (IEA)
spleen hypoplasia  (IEA)
thin retinal outer nuclear layer  (IAGP)
ventricular septal defect  (IEA)
References

Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:12520002   PMID:15368895   PMID:16141072   PMID:16141073   PMID:16332269   PMID:16602821  
PMID:16682970   PMID:16682973   PMID:17920017   PMID:18694559   PMID:18772192   PMID:21052544   PMID:21245082   PMID:21267068   PMID:21565611   PMID:21623382   PMID:21655357   PMID:21685394  
PMID:21725307   PMID:21956870   PMID:22446187   PMID:22832925   PMID:23644468   PMID:23943788   PMID:24051377   PMID:24223178   PMID:24356449   PMID:24415959   PMID:24421332   PMID:24457600  
PMID:24469809   PMID:24927541   PMID:24946806   PMID:25125607   PMID:25761237   PMID:25807483   PMID:25859007   PMID:26139610   PMID:26301811   PMID:26305532   PMID:26496610   PMID:26594343  
PMID:26747773   PMID:27002738   PMID:27150101   PMID:27328943   PMID:27979967   PMID:28679290   PMID:29487109   PMID:29706649   PMID:29899041   PMID:30035750   PMID:30195768   PMID:30332642  
PMID:30446612   PMID:31138784   PMID:31302159   PMID:31694913   PMID:31747684   PMID:31879347   PMID:32290105   PMID:32325033  


Genomics

Comparative Map Data
Cep290
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910100,323,410 - 100,411,533 (+)NCBI
GRCm3810100,487,548 - 100,575,671 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10100,487,558 - 100,574,840 (+)EnsemblGRCm38mm10GRCm38
MGSCv371099,950,923 - 100,036,289 (+)NCBIGRCm37mm9NCBIm37
Celera10102,420,230 - 102,505,600 (+)NCBICelera
Cytogenetic Map10D1NCBI
cM Map1051.48NCBI
CEP290
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1288,049,016 - 88,142,099 (-)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl1288,049,014 - 88,142,088 (-)EnsemblGRCh38hg38GRCh38
GRCh381288,049,013 - 88,142,216 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371288,442,790 - 88,535,993 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361286,966,921 - 87,060,124 (-)NCBINCBI36hg18NCBI36
Celera1288,110,804 - 88,204,074 (-)NCBI
Cytogenetic Map12q21.32NCBI
HuRef1285,509,678 - 85,602,945 (-)NCBIHuRef
CHM1_11288,407,817 - 88,501,072 (-)NCBICHM1_1
Cep290
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0740,217,269 - 40,306,327 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl740,217,269 - 40,306,327 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0740,256,312 - 40,344,956 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4738,138,545 - 38,228,716 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1738,159,544 - 38,248,364 (+)NCBI
Celera732,302,859 - 32,391,640 (+)NCBICelera
Cytogenetic Map7q13NCBI
Cep290
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540525,533,525 - 25,606,212 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540525,533,037 - 25,607,021 (-)NCBIChiLan1.0ChiLan1.0
CEP290
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11288,896,146 - 88,988,953 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1288,896,146 - 88,988,044 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01285,589,911 - 85,683,365 (-)NCBIMhudiblu_PPA_v0panPan3
CEP290
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1529,194,983 - 29,280,429 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11529,194,449 - 29,281,351 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Cep290
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365075,223,756 - 5,305,392 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CEP290
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl594,384,414 - 94,475,057 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1594,384,397 - 94,474,337 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2599,071,072 - 99,161,124 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CEP290
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl1183,412,379 - 83,514,596 (-)Ensembl
ChlSab1.11183,420,911 - 83,515,466 (-)NCBI
Cep290
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248377,054,659 - 7,138,840 (-)NCBI

Position Markers
AW551239  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3810100,572,481 - 100,572,569UniSTSGRCm38
MGSCv3710100,035,115 - 100,035,203UniSTSGRCm37
Celera10102,504,426 - 102,504,514UniSTS
Cytogenetic Map10D1UniSTS
cM Map1059.0UniSTS
Whitehead/MRC_RH101120.79UniSTS
UniSTS:225138  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3810100,551,222 - 100,551,417UniSTSGRCm38
MGSCv3710100,013,856 - 100,014,051UniSTSGRCm37
Celera10102,483,134 - 102,483,329UniSTS
Cytogenetic Map10D1UniSTS
cM Map1059.0UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357740Obsty3_mobesity 3 (mouse)Not determined108359714116355075Mouse
1302067Scc9_mcolon tumor susceptibility 9 (mouse)Not determined1018383585125739363Mouse
27226772Tibl13_mtibia length 13, 10 week (mouse)1019000000129800000Mouse
1558757Eae34_mexperimental allergic encephalomyelitis susceptibility 34 (mouse)Not determined1021532255114381325Mouse
26884426Cvht1_mcranial vault height 1, 5 week (mouse)1024800000121200000Mouse
27095911Pglq15_mpelvic girdle length QTL 15, 16 week (mouse)1039300000129800000Mouse
27226764Tibl19_mtibia length 19, 16 week (mouse)1039300000129800000Mouse
26884411Bzwq8_mbi-zygomatic width QTL 8, 10 week (mouse)1045000000116100000Mouse
26884407Bzwq14_mbi-zygomatic width QTL 14, 16 wee (mouse)1045600000120800000Mouse
26884450Sklq15_mskull length QTL 15, 16 week (mouse)1059500000122500000Mouse
13208560Wght9_mweight 9 (mouse)1060000000121000000Mouse
26884424Zlq9_mzygomatic length QTL 9, 16 week (mouse)1064100000116100000Mouse
26884447Sklq9_mskull length QTL 9, 10 week (mouse)1067500000111900000Mouse
26884430Zlq5_mzygomatic length QTL 5, 10 week (mouse)1068000000125000000Mouse
26884405Huml2_mhumerus length 2, 5 week (mouse)1069900000132500000Mouse
11039497Ltpr5a_mLeishmania tropica response 5a (mouse)1073671039107671185Mouse
11353832Pcholq4_mplasma cholesterol QTL 4 (mouse)1074151384125680038Mouse
11353843Gluq1_mblood glucose QTL 1 (mouse)1074151384125680038Mouse
1300975Fembrs3_mfemur breaking strength 3 (mouse)Not determined1075502706109502905Mouse
4142137Femwf3_mfemur work to failure 3 (mouse)Not determined75502706109502905Mouse
1357632Vtbt9_mvertebral trabecular bone trait 9 (mouse)Not determined1075502706109502905Mouse
11251717Siim1_mstress induced immobility 1 (mouse)1078545406112545406Mouse
14747004Mancz8_mmandible centroid size 8 (mouse)1082242550116242550Mouse
1301165Lith7_mlithogenic gene 7 (mouse)Not determined1082473556116473795Mouse
11059550Lmr32a_mleishmaniasis resistance 32a (mouse)1082473556116473795Mouse
11059551Lmr32b_mleishmaniasis resistance 32b (mouse)1082473556116473795Mouse
11059553Lmr32d_mleishmaniasis resistance 32d (mouse)1082473556116473795Mouse
11059554Lmr32e_mleishmaniasis resistance 32e (mouse)1082473556116473795Mouse
11059555Lmr32f_mleishmaniasis resistance 32f (mouse)1082473556116473795Mouse
10043881Adip24_madiposity 24 (mouse)Not determined1082556941116557090Mouse
4141054mwfh_mmodifier of white forlock hypopigmentation (mouse)Not determined83181141117181274Mouse
1357779Tesq3_mtestis weight QTL 3 (mouse)Not determined1084243786122205623Mouse
4141479W10q8_mweight 10 weeks QTL 8 (mouse)Not determined84243786122205623Mouse
4141387Lgaq5_mlate growth adjusted QTL 5 (mouse)Not determined84243786122205623Mouse
4142496W6q8_mweight 6 weeks QTL 8 (mouse)Not determined84243786122205623Mouse
4142365Egq9_mearly growth QTL 9 (mouse)Not determined84243786122205623Mouse
1357594Estoq3_membryo survival total QTL 3 (mouse)Not determined1084243786122205623Mouse
1357622Espq3_membryo survival preimplantation QTL 3 (mouse)Not determined1084243786122205623Mouse
1357638Cia29_mcollagen induced arthritis 29 (mouse)Not determined1085619118118661448Mouse
1300797Sluc22_msusceptibility to lung cancer 22 (mouse)Not determined1086877747120877895Mouse
1301520Uvbi1_mUVB induced immunosuppression 1 (mouse)Not determined1087073224121073368Mouse
1300908Insq4_minsulin QTL 4 (mouse)Not determined1087073224121073368Mouse
1300921Skl4_mskeletal size (tail length) 4 (mouse)Not determined1088252393122252530Mouse
4142386Tgq20_mtriglyceride QTL 20 (mouse)Not determined89000595123000595Mouse
1301758Fcsa3_mfemoral cross-sectional area 3 (mouse)Not determined1090091790124091893Mouse
11039516Ltpr5_mLeishmania tropica response 5 (mouse)1090671039125739363Mouse
13208554Lgth11_mbody length 11 (mouse)1091000000121000000Mouse
1302162Ednrbm1_mendothelin receptor type B modifier 1 (mouse)Not determined1092291521103877895Mouse
12910821Ogrq4_moverall growth rate QTL 4 (mouse)1092333194107484128Mouse
4142074Tmevp2_mTheiler's murine encephalomyelitis virus persistence 2 (mouse)Not determined92894079111732414Mouse
4142461Bmd25_mbone mineral density 25 (mouse)Not determined1097381196130694993Mouse
1357544Vtbt10_mvertebral trabecular bone trait 10 (mouse)Not determined1097381196130694993Mouse
11533919Mvb4_mmodifier of vibrator 4 (mouse)397381196130694993Mouse
11533921Mvb2_mmodifier of vibrator 2 (mouse)1097381196130694993Mouse
12880413V125Dq9_mvitamin D active form serum level QTL 9 (mouse)1097700000130694993Mouse
4141402T2dm1sa_mtype 2 diabetes mellitus 1 in SMXA RI mice (mouse)Not determined97922739130694993Mouse
11040593Lmr5e_mleishmaniasis resistance 5e (mouse)1099384730130694993Mouse
11040595Lmr5c_mleishmaniasis resistance 5c (mouse)1099384730130694993Mouse
11040597Lmr5a_mleishmaniasis resistance 5a (mouse)1099384730130694993Mouse
11059544Lmr32_mleishmaniasis resistance 32 (mouse)1099473556116384957Mouse
11059552Lmr32c_mleishmaniasis resistance 32c (mouse)1099473556116384957Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:85
Count of miRNA genes:74
Interacting mature miRNAs:82
Transcripts:ENSMUST00000164751
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000164751   ⟹   ENSMUSP00000130899
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10100,488,289 - 100,573,655 (+)Ensembl
RefSeq Acc Id: ENSMUST00000218000
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10100,548,864 - 100,567,259 (+)Ensembl
RefSeq Acc Id: ENSMUST00000218703
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10100,540,454 - 100,545,130 (+)Ensembl
RefSeq Acc Id: ENSMUST00000219408   ⟹   ENSMUSP00000151414
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10100,542,441 - 100,547,053 (+)Ensembl
RefSeq Acc Id: ENSMUST00000219643
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10100,544,425 - 100,573,381 (+)Ensembl
RefSeq Acc Id: ENSMUST00000219765   ⟹   ENSMUSP00000151712
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10100,488,289 - 100,573,655 (+)Ensembl
RefSeq Acc Id: ENSMUST00000219889
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10100,571,934 - 100,574,840 (+)Ensembl
RefSeq Acc Id: ENSMUST00000220231
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10100,498,331 - 100,500,195 (+)Ensembl
RefSeq Acc Id: ENSMUST00000220331
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10100,508,726 - 100,512,345 (+)Ensembl
RefSeq Acc Id: ENSMUST00000220346   ⟹   ENSMUSP00000151388
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10100,487,558 - 100,573,655 (+)Ensembl
RefSeq Acc Id: NM_146009   ⟹   NP_666121
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910100,323,444 - 100,411,533 (+)NCBI
GRCm3810100,487,582 - 100,575,671 (+)NCBI
MGSCv371099,950,923 - 100,036,289 (+)RGD
Celera10102,420,230 - 102,505,600 (+)RGD
cM Map10 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006513526   ⟹   XP_006513589
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910100,323,410 - 100,409,527 (+)NCBI
GRCm3810100,487,548 - 100,573,656 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006513527   ⟹   XP_006513590
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910100,323,410 - 100,409,527 (+)NCBI
GRCm3810100,487,548 - 100,573,656 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006513528   ⟹   XP_006513591
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910100,323,410 - 100,409,527 (+)NCBI
GRCm3810100,487,548 - 100,573,656 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_666121   ⟸   NM_146009
- UniProtKB: Q6A078 (UniProtKB/Swiss-Prot),   E9Q9M0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006513589   ⟸   XM_006513526
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006513590   ⟸   XM_006513527
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006513591   ⟸   XM_006513528
- Peptide Label: isoform X3
- UniProtKB: Q6A078 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000130899   ⟸   ENSMUST00000164751
RefSeq Acc Id: ENSMUSP00000151414   ⟸   ENSMUST00000219408
RefSeq Acc Id: ENSMUSP00000151712   ⟸   ENSMUST00000219765
RefSeq Acc Id: ENSMUSP00000151388   ⟸   ENSMUST00000220346
Protein Domains
CEP209_CC5

Promoters
RGD ID:8673172
Promoter ID:EPDNEW_M14617
Type:initiation region
Name:Cep290_1
Description:Mus musculus centrosomal protein 290 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3810100,544,419 - 100,544,479EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2384917 AgrOrtholog
Ensembl Genes ENSMUSG00000019971 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000130899 UniProtKB/TrEMBL
  ENSMUSP00000151388 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000151414 UniProtKB/TrEMBL
  ENSMUSP00000151712 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000164751 UniProtKB/TrEMBL
  ENSMUST00000219408 UniProtKB/TrEMBL
  ENSMUST00000219765 UniProtKB/Swiss-Prot
  ENSMUST00000220346 ENTREZGENE, UniProtKB/TrEMBL
InterPro Cep209_CC5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Cep290 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:216274 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:2384917 ENTREZGENE
NCBI Gene 216274 ENTREZGENE
PANTHER PTHR18879 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam CEP209_CC5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Cep290 PhenoGen
UniGene Mm.229114 ENTREZGENE
UniProt A0A1W2P6U7_MOUSE UniProtKB/TrEMBL
  CE290_MOUSE UniProtKB/Swiss-Prot
  E9Q9M0 ENTREZGENE, UniProtKB/TrEMBL
  Q6A078 ENTREZGENE
  Q99KF2_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q8BIB8 UniProtKB/Swiss-Prot