Prom1 (prominin 1) - Rat Genome Database

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Gene: Prom1 (prominin 1) Mus musculus
Analyze
Symbol: Prom1
Name: prominin 1
RGD ID: 1331934
MGI Page MGI
Description: Predicted to enable actinin binding activity; cadherin binding activity; and cholesterol binding activity. Involved in camera-type eye photoreceptor cell differentiation and retina layer formation. Located in several cellular components, including brush border; photoreceptor outer segment; and prominosome. Is integral component of plasma membrane. Is expressed in several structures, including epithelium; eye; future hindbrain; genitourinary system; and nervous system. Used to study retinitis pigmentosa 41. Human ortholog(s) of this gene implicated in cone-rod dystrophy 12 and retinitis pigmentosa 41. Orthologous to human PROM1 (prominin 1); INTERACTS WITH 1,1-dichloroethene; 1,2-dichloroethane; 1,2-dimethylhydrazine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 4932416E19Rik; AC13; AC133; antigen AC133 homolog; CD133; P; Pro; Prom; Prom-1; prominin-1; prominin-like 1; prominin-like protein 1; Proml1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39544,150,963 - 44,260,850 (-)NCBIGRCm39mm39
GRCm39 Ensembl544,150,962 - 44,259,374 (-)Ensembl
GRCm38543,993,621 - 44,102,047 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl543,993,620 - 44,102,032 (-)EnsemblGRCm38mm10GRCm38
MGSCv37544,384,861 - 44,492,975 (-)NCBIGRCm37mm9NCBIm37
MGSCv36544,281,870 - 44,389,929 (-)NCBImm8
Celera541,422,565 - 41,530,564 (-)NCBICelera
Cytogenetic Map5B3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(20S)-ginsenoside Rg3  (ISO)
(S)-naringenin  (ISO)
1,1-dichloroethene  (EXP)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2,4-dinitrotoluene  (ISO)
2-acetamidofluorene  (ISO)
2-butoxyethanol  (EXP)
3,5-diethoxycarbonyl-1,4-dihydrocollidine  (EXP)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (EXP)
4-hydroxyphenyl retinamide  (EXP)
5-aza-2'-deoxycytidine  (ISO)
5-azacytidine  (ISO)
5-fluorouracil  (ISO)
acetamide  (ISO)
acrylamide  (EXP)
actinomycin D  (ISO)
aflatoxin B1  (EXP,ISO)
aflatoxin B2  (ISO)
ammonium chloride  (ISO)
apigenin  (ISO)
arsane  (EXP)
arsenic atom  (EXP)
arsenous acid  (ISO)
auramine O  (ISO)
azathioprine  (ISO)
benzo[a]pyrene  (EXP,ISO)
beta-naphthoflavone  (ISO)
bexarotene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
butane-2,3-dione  (ISO)
butyric acid  (ISO)
cadmium dichloride  (ISO)
carbon nanotube  (EXP)
chloroprene  (EXP)
chlorpyrifos  (EXP)
choline  (EXP)
ciprofloxacin  (ISO)
cisplatin  (ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
crizotinib  (ISO)
crocidolite asbestos  (EXP)
cyclosporin A  (EXP,ISO)
daunorubicin  (ISO)
diallyl trisulfide  (ISO)
diarsenic trioxide  (ISO)
dibutyl phthalate  (ISO)
diethylstilbestrol  (EXP)
dioxygen  (ISO)
diuron  (ISO)
dorsomorphin  (ISO)
eckol  (ISO)
endosulfan  (ISO)
ethanol  (EXP,ISO)
ethyl methanesulfonate  (ISO)
fisetin  (ISO)
folic acid  (EXP)
furan  (EXP,ISO)
genistein  (EXP)
glycidol  (ISO)
irinotecan  (ISO)
L-methionine  (EXP)
lead diacetate  (EXP)
lupeol  (EXP)
melatonin  (ISO)
methamphetamine  (ISO)
methapyrilene  (ISO)
methyl methanesulfonate  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
N-nitrosodiethylamine  (EXP,ISO)
N-nitrosodimethylamine  (ISO)
oxaliplatin  (ISO)
paclitaxel  (ISO)
pentane-2,3-dione  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenethyl caffeate  (ISO)
phenobarbital  (EXP)
phenylmercury acetate  (ISO)
pirinixic acid  (EXP,ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
progesterone  (EXP,ISO)
propiconazole  (EXP)
pyrazinecarboxamide  (ISO)
quercetin  (ISO)
ritodrine  (EXP)
rotenone  (ISO)
SB 431542  (ISO)
SCH 23390  (ISO)
silver atom  (EXP)
silver(0)  (EXP)
sodium arsenite  (ISO)
sodium fluoride  (EXP)
Soman  (ISO)
sunitinib  (ISO)
tamoxifen  (EXP,ISO)
Tesaglitazar  (ISO)
testosterone  (EXP)
tetrachloromethane  (EXP,ISO)
titanium dioxide  (EXP)
toluene  (ISO)
topotecan  (ISO)
tributylstannane  (EXP)
Triptolide  (ISO)
tris(2-butoxyethyl) phosphate  (ISO)
troglitazone  (EXP,ISO)
urethane  (ISO)
valproic acid  (EXP,ISO)
vinclozolin  (ISO)
zoledronic acid  (ISO)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

Additional References at PubMed
PMID:9356465   PMID:9389721   PMID:10349636   PMID:10587575   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11467842   PMID:11597144   PMID:12477932   PMID:12805272   PMID:12832703  
PMID:15141162   PMID:15316084   PMID:15716349   PMID:15917475   PMID:15976444   PMID:16141072   PMID:16141073   PMID:16602821   PMID:16892058   PMID:17109118   PMID:17122771   PMID:17185982  
PMID:17283184   PMID:17289932   PMID:17498271   PMID:17589506   PMID:17874118   PMID:18172007   PMID:18195354   PMID:18287559   PMID:18469343   PMID:18497883   PMID:18497886   PMID:18621802  
PMID:18654668   PMID:18663533   PMID:18676816   PMID:18971946   PMID:18973680   PMID:19053060   PMID:19092805   PMID:19115422   PMID:19228982   PMID:19243017   PMID:19321785   PMID:19430532  
PMID:19628793   PMID:19666823   PMID:19699546   PMID:19718438   PMID:20181261   PMID:20346143   PMID:20374199   PMID:20643125   PMID:20691176   PMID:20717901   PMID:20808829   PMID:20871603  
PMID:21067603   PMID:21074523   PMID:21187924   PMID:21266405   PMID:21267068   PMID:21335239   PMID:21337465   PMID:21407811   PMID:21421844   PMID:21435437   PMID:21457403   PMID:21502507  
PMID:21826226   PMID:21873635   PMID:21931765   PMID:21943210   PMID:21947380   PMID:22199291   PMID:22558265   PMID:22562503   PMID:22664874   PMID:22763787   PMID:23190887   PMID:23233126  
PMID:23308088   PMID:23364326   PMID:23407958   PMID:23420882   PMID:23431057   PMID:23495873   PMID:23509298   PMID:23637986   PMID:23643363   PMID:23675446   PMID:23723983   PMID:23948231  
PMID:24229643   PMID:24371086   PMID:24682043   PMID:24700724   PMID:24798639   PMID:24952961   PMID:24992712   PMID:25184684   PMID:25414197   PMID:25515659   PMID:25883935   PMID:25919081  
PMID:26095253   PMID:26288357   PMID:26735577   PMID:26745185   PMID:26776520   PMID:26802325   PMID:27059286   PMID:27166167   PMID:27246266   PMID:27312243   PMID:27367586   PMID:27431614  
PMID:27462123   PMID:27472062   PMID:27565343   PMID:27929130   PMID:27974211   PMID:28077488   PMID:28104292   PMID:28329676   PMID:28445456   PMID:28482867   PMID:28504719   PMID:28512199  
PMID:28525381   PMID:28645539   PMID:28743634   PMID:28795331   PMID:28808228   PMID:29248454   PMID:29431914   PMID:29772232   PMID:30328220   PMID:30523147   PMID:30826058   PMID:30985297  
PMID:31015227   PMID:31065682   PMID:31524221   PMID:31646784   PMID:31772170   PMID:32290105   PMID:32554499   PMID:32727894   PMID:33030802   PMID:33173221  


Genomics

Comparative Map Data
Prom1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39544,150,963 - 44,260,850 (-)NCBIGRCm39mm39
GRCm39 Ensembl544,150,962 - 44,259,374 (-)Ensembl
GRCm38543,993,621 - 44,102,047 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl543,993,620 - 44,102,032 (-)EnsemblGRCm38mm10GRCm38
MGSCv37544,384,861 - 44,492,975 (-)NCBIGRCm37mm9NCBIm37
MGSCv36544,281,870 - 44,389,929 (-)NCBImm8
Celera541,422,565 - 41,530,564 (-)NCBICelera
Cytogenetic Map5B3NCBI
PROM1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl415,963,076 - 16,084,378 (-)EnsemblGRCh38hg38GRCh38
GRCh38415,968,226 - 16,084,059 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37415,969,851 - 16,085,646 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36415,578,955 - 15,686,664 (-)NCBINCBI36hg18NCBI36
Build 34415,646,125 - 15,753,835NCBI
Celera416,434,397 - 16,550,164 (-)NCBI
Cytogenetic Map4p15.32NCBI
HuRef415,319,438 - 15,435,190 (-)NCBIHuRef
CHM1_1415,967,639 - 16,083,574 (-)NCBICHM1_1
Prom1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21466,989,545 - 67,094,534 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl1466,990,160 - 67,094,527 (+)Ensembl
Rnor_6.01471,532,321 - 71,637,400 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1471,533,063 - 71,637,417 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01471,573,130 - 71,668,097 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41472,122,986 - 72,230,453 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11472,125,409 - 72,232,843 (+)NCBI
Celera1465,949,815 - 66,052,606 (+)NCBICelera
Cytogenetic Map14q21NCBI
Prom1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554807,961,389 - 8,059,589 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554807,955,501 - 8,059,537 (+)NCBIChiLan1.0ChiLan1.0
PROM1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1415,702,155 - 15,816,070 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl415,702,159 - 15,815,454 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0410,405,299 - 10,519,518 (-)NCBIMhudiblu_PPA_v0panPan3
PROM1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1364,229,487 - 64,362,346 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl364,260,685 - 64,382,009 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha366,778,870 - 66,880,110 (+)NCBI
ROS_Cfam_1.0364,707,547 - 64,840,616 (+)NCBI
UMICH_Zoey_3.1364,228,808 - 64,330,214 (+)NCBI
UNSW_CanFamBas_1.0364,432,846 - 64,534,046 (+)NCBI
UU_Cfam_GSD_1.0364,793,321 - 64,894,543 (+)NCBI
Prom1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528558,176,590 - 58,315,536 (+)NCBI
SpeTri2.0NW_00493647711,878,261 - 12,017,228 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PROM1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl811,215,659 - 11,317,312 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1811,215,659 - 11,331,442 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2810,866,626 - 10,987,214 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PROM1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12734,093,699 - 34,243,630 (+)NCBI
ChlSab1.1 Ensembl2734,129,532 - 34,243,778 (+)Ensembl
Vero_WHO_p1.0NW_02366604780,860,464 - 80,977,347 (+)NCBI
Prom1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475515,765,162 - 15,886,023 (+)NCBI

Position Markers
D5Mit79  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38544,058,006 - 44,058,109UniSTSGRCm38
MGSCv37544,449,245 - 44,449,348UniSTSGRCm37
Celera541,486,908 - 41,487,047UniSTS
Cytogenetic Map5B3UniSTS
cM Map526.0UniSTS
Whitehead Genetic517.5UniSTS
Whitehead_YAC5 UniSTS
UniSTS:225215  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38544,079,309 - 44,079,489UniSTSGRCm38
MGSCv37544,470,548 - 44,470,728UniSTSGRCm37
Celera541,508,262 - 41,508,442UniSTS
Cytogenetic Map5B3UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301693Sle6_msystemic lupus erythematosus susceptibility 6 (mouse)Not determined5884069387693978Mouse
14696730Kidlq1_mkidney weight, left QTL 1 (mouse)51340580847405808Mouse
1301685Estq2_mestradiol regulated response QTL 2 (mouse)Not determined51547674049476846Mouse
1300719Iba5_minduction of brown adipocytes 5 (mouse)Not determined52052964954529790Mouse
1301776Skts3_mskin tumor susceptibility 3 (mouse)Not determined52150995255510060Mouse
11537368Hmtb10_mhemostasis and thrombosis 10 (mouse)52189582554342976Mouse
11537367Hmtb11_mhemostasis and thrombosis 11 (mouse)52189582564649236Mouse
11341716Rvfs3_mRift Valley fever susceptibility 3 (mouse)526236236138457140Mouse
1300701Cd8ts1_mCD8 T cell subset 1 (mouse)Not determined52705800661058109Mouse
1301555Alcp10_malcohol preference locus 10 (mouse)Not determined53086693364867138Mouse
1301403Alcp9_malcohol preference locus 9 (mouse)Not determined53086693364867138Mouse
11353827Hplq1_mhot plate latency 1 (mouse)53141311665413116Mouse
4140990Lgq6_mlate growth QTL 6 (mouse)Not determined31975890100630065Mouse
4141219W10q16_mweight 10 weeks QTL 16 (mouse)Not determined31975890100630065Mouse
10043995Hbnr9_mHeligmosomoides bakeri nematode resistance 9 (mouse)Not determined53333132567331534Mouse
1301845Lxw4_mlupus BXSB x NZW 4 (mouse)Not determined53553712069537252Mouse
11049558Lmr24b_mleishmaniasis resistance 24b (mouse)53553712069537252Mouse
11049559Lmr24c_mleishmaniasis resistance 24c (mouse)53553712069537252Mouse
11049561Lmr24e_mleishmaniasis resistance 24e (mouse)53553712069537252Mouse
1301223Hdlq7_mHDL QTL 7 (mouse)Not determined53569722669697372Mouse
13464252Ahl10_mage related hearing loss, early onset 10 (mouse)53569722669697372Mouse
4141647Hrvhf1_mheart rate variability, high frequency 1 (mouse)Not determined3627608170276081Mouse
1301170Lith13_mlithogenic gene 13 (mouse)Not determined53633714470337256Mouse
36049766Ars22_mantibody response to SARS-CoV 22, day 29, IgG3 (mouse)53680000045300000Mouse
36049767Ars23_mantibody response to SARS-CoV 23, day 29, Total IgG (mouse)53680000045300000Mouse
36049768Ars24_mantibody response to SARS-CoV 24, 4 days post-rechallenge, IgG3 (mouse)53680000045300000Mouse
36049769Ars13_mantibody response to SARS-CoV 13, day 7, IgG2a+IgG2c (mouse)53680000045300000Mouse
36049770Ars14_mantibody response to SARS-CoV 14, day 7, IgG3 (mouse)53680000045300000Mouse
36049771Ars15_mantibody response to SARS-CoV 15, day 7, IgM (mouse)53680000045300000Mouse
36049772Ars20_mantibody response to SARS-CoV 20, day 15, Total IgG (mouse)53680000045300000Mouse
36049773Ars21_mantibody response to SARS-CoV 21, day 29, IgG2a+IgG2c (mouse)53680000045300000Mouse
36049774Ars16_mantibody response to SARS-CoV 16, day 7, Total IgG (mouse)53680000045300000Mouse
36049775Ars17_mantibody response to SARS-CoV 17, day 15, IgG2a+IgG2c (mouse)53680000045300000Mouse
36049776Ars18_mantibody response to SARS-CoV 18, day 15, IgG3 (mouse)53680000045300000Mouse
36049777Ars19_mantibody response to SARS-CoV 19, day 15, IgM (mouse)53680000045300000Mouse
35673310Ari4_mantibody response to influenza 4, day 15-45, IgG2b (mouse)53680000045300000Mouse
1300926Hpi2_mhepatic PMN infiltration 2 (mouse)Not determined53742414464649236Mouse
1301524Lmb2_mlupus in MRL and B6 F2 cross (mouse)Not determined537424144112317856Mouse
13464246Ahl11_mage related hearing loss, early onset 11 (mouse)53748643571486554Mouse
1300951Gbvq1_mgallstone bladder volume QTL 1 (mouse)Not determined53795433971954456Mouse
13464245Ahl12_mage related hearing loss, early onset 12 (mouse)53795433971954456Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1903
Count of miRNA genes:386
Interacting mature miRNAs:472
Transcripts:ENSMUST00000030973, ENSMUST00000074113, ENSMUST00000087441, ENSMUST00000087442, ENSMUST00000165909, ENSMUST00000171543, ENSMUST00000177946, ENSMUST00000179059
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001163577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001163578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001163581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001163582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001163583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001163584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001163585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_008935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006503786 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006503788 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006503789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006503790 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006503791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320720 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320722 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320723 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320724 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320725 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164898 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164899 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164900 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164901 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164902 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164904 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164905 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164906 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001784640 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001784642 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001784643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004942456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC102476 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC103621 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC164004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF026269 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF039663 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF305215 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK029921 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK030027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK085654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY099088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY223521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY223522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC028286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466524 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ054003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX224587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EH108160 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000030973   ⟹   ENSMUSP00000030973
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl544,158,785 - 44,252,055 (-)Ensembl
GRCm38.p6 Ensembl544,001,443 - 44,094,713 (-)Ensembl
RefSeq Acc Id: ENSMUST00000074113   ⟹   ENSMUSP00000073751
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl544,150,962 - 44,259,296 (-)Ensembl
GRCm38.p6 Ensembl543,993,620 - 44,101,954 (-)Ensembl
RefSeq Acc Id: ENSMUST00000087441   ⟹   ENSMUSP00000084707
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl544,150,964 - 44,259,023 (-)Ensembl
GRCm38.p6 Ensembl543,993,622 - 44,101,681 (-)Ensembl
RefSeq Acc Id: ENSMUST00000087442   ⟹   ENSMUSP00000084709
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl544,158,785 - 44,252,110 (-)Ensembl
GRCm38.p6 Ensembl544,001,443 - 44,094,768 (-)Ensembl
RefSeq Acc Id: ENSMUST00000165909   ⟹   ENSMUSP00000129909
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl544,150,964 - 44,256,567 (-)Ensembl
GRCm38.p6 Ensembl543,993,622 - 44,099,225 (-)Ensembl
RefSeq Acc Id: ENSMUST00000171543   ⟹   ENSMUSP00000128978
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl544,150,964 - 44,259,374 (-)Ensembl
GRCm38.p6 Ensembl543,993,622 - 44,102,032 (-)Ensembl
RefSeq Acc Id: ENSMUST00000177946   ⟹   ENSMUSP00000136483
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl544,150,967 - 44,252,110 (-)Ensembl
GRCm38.p6 Ensembl543,993,625 - 44,094,768 (-)Ensembl
RefSeq Acc Id: ENSMUST00000179059   ⟹   ENSMUSP00000137557
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl544,150,967 - 44,252,110 (-)Ensembl
GRCm38.p6 Ensembl543,993,625 - 44,094,768 (-)Ensembl
RefSeq Acc Id: ENSMUST00000195942
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl544,204,935 - 44,225,027 (-)Ensembl
GRCm38.p6 Ensembl544,047,593 - 44,067,685 (-)Ensembl
RefSeq Acc Id: ENSMUST00000196178   ⟹   ENSMUSP00000143403
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl544,213,411 - 44,256,528 (-)Ensembl
GRCm38.p6 Ensembl544,056,069 - 44,099,186 (-)Ensembl
RefSeq Acc Id: ENSMUST00000196378   ⟹   ENSMUSP00000142483
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl544,150,964 - 44,162,261 (-)Ensembl
GRCm38.p6 Ensembl543,993,622 - 44,004,919 (-)Ensembl
RefSeq Acc Id: ENSMUST00000196852
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl544,201,366 - 44,259,300 (-)Ensembl
GRCm38.p6 Ensembl544,044,024 - 44,101,958 (-)Ensembl
RefSeq Acc Id: ENSMUST00000196853
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl544,169,841 - 44,190,362 (-)Ensembl
GRCm38.p6 Ensembl544,012,499 - 44,033,020 (-)Ensembl
RefSeq Acc Id: ENSMUST00000197706   ⟹   ENSMUSP00000142632
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl544,158,785 - 44,252,055 (-)Ensembl
GRCm38.p6 Ensembl544,001,443 - 44,094,713 (-)Ensembl
RefSeq Acc Id: ENSMUST00000197749
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl544,187,022 - 44,201,989 (-)Ensembl
GRCm38.p6 Ensembl544,029,680 - 44,044,647 (-)Ensembl
RefSeq Acc Id: ENSMUST00000197750   ⟹   ENSMUSP00000142375
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl544,158,622 - 44,256,534 (-)Ensembl
GRCm38.p6 Ensembl544,001,280 - 44,099,192 (-)Ensembl
RefSeq Acc Id: ENSMUST00000198218
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl544,256,997 - 44,259,300 (-)Ensembl
GRCm38.p6 Ensembl544,099,655 - 44,101,958 (-)Ensembl
RefSeq Acc Id: ENSMUST00000198347   ⟹   ENSMUSP00000142677
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl544,184,137 - 44,202,915 (-)Ensembl
GRCm38.p6 Ensembl544,026,795 - 44,045,573 (-)Ensembl
RefSeq Acc Id: ENSMUST00000199739
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl544,191,012 - 44,195,007 (-)Ensembl
GRCm38.p6 Ensembl544,033,670 - 44,037,665 (-)Ensembl
RefSeq Acc Id: NM_001163577   ⟹   NP_001157049
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,150,964 - 44,259,078 (-)NCBI
GRCm38543,993,622 - 44,101,736 (-)NCBI
MGSCv37544,384,861 - 44,492,975 (-)RGD
Celera541,422,565 - 41,530,564 (-)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001163578   ⟹   NP_001157050
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,158,785 - 44,252,110 (-)NCBI
GRCm38544,001,443 - 44,094,768 (-)NCBI
MGSCv37544,384,861 - 44,492,975 (-)RGD
Celera541,422,565 - 41,530,564 (-)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001163581   ⟹   NP_001157053
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,158,785 - 44,252,110 (-)NCBI
GRCm38544,001,443 - 44,094,768 (-)NCBI
MGSCv37544,384,861 - 44,492,975 (-)RGD
Celera541,422,565 - 41,530,564 (-)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001163582   ⟹   NP_001157054
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,158,785 - 44,252,110 (-)NCBI
GRCm38544,001,443 - 44,094,768 (-)NCBI
MGSCv37544,384,861 - 44,492,975 (-)RGD
Celera541,422,565 - 41,530,564 (-)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001163583   ⟹   NP_001157055
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,158,785 - 44,252,110 (-)NCBI
GRCm38544,001,443 - 44,094,768 (-)NCBI
MGSCv37544,384,861 - 44,492,975 (-)RGD
Celera541,422,565 - 41,530,564 (-)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001163584   ⟹   NP_001157056
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,150,964 - 44,252,110 (-)NCBI
GRCm38543,993,622 - 44,094,768 (-)NCBI
MGSCv37544,384,861 - 44,492,975 (-)RGD
Celera541,422,565 - 41,530,564 (-)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001163585   ⟹   NP_001157057
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,150,964 - 44,252,110 (-)NCBI
GRCm38543,993,622 - 44,094,768 (-)NCBI
MGSCv37544,384,861 - 44,492,975 (-)RGD
Celera541,422,565 - 41,530,564 (-)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_008935   ⟹   NP_032961
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,150,964 - 44,259,078 (-)NCBI
GRCm38543,993,622 - 44,101,736 (-)NCBI
MGSCv37544,384,861 - 44,492,975 (-)RGD
Celera541,422,565 - 41,530,564 (-)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006503786   ⟹   XP_006503849
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,150,963 - 44,260,850 (-)NCBI
GRCm38543,993,621 - 44,101,949 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006503788   ⟹   XP_006503851
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,151,202 - 44,259,430 (-)NCBI
GRCm38543,993,621 - 44,101,949 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006503789   ⟹   XP_006503852
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,150,964 - 44,260,850 (-)NCBI
GRCm38543,993,622 - 44,101,952 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006503790   ⟹   XP_006503853
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,150,964 - 44,258,446 (-)NCBI
GRCm38543,993,622 - 44,099,320 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006503791   ⟹   XP_006503854
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,150,963 - 44,258,922 (-)NCBI
GRCm38543,993,621 - 44,101,545 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017320720   ⟹   XP_017176209
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,150,963 - 44,258,982 (-)NCBI
GRCm38543,993,621 - 44,101,545 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017320722   ⟹   XP_017176211
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,150,963 - 44,256,645 (-)NCBI
GRCm38543,993,621 - 44,099,499 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017320723   ⟹   XP_017176212
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,150,963 - 44,258,462 (-)NCBI
GRCm38543,993,621 - 44,099,499 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017320724   ⟹   XP_017176213
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,150,963 - 44,259,397 (-)NCBI
GRCm38543,993,621 - 44,102,047 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017320725   ⟹   XP_017176214
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,151,202 - 44,260,850 (-)NCBI
GRCm38543,993,621 - 44,101,949 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030254207   ⟹   XP_030110067
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,150,963 - 44,256,642 (-)NCBI
GRCm38543,993,860 - 44,099,496 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036164898   ⟹   XP_036020791
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,150,963 - 44,258,982 (-)NCBI
RefSeq Acc Id: XM_036164899   ⟹   XP_036020792
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,151,202 - 44,259,397 (-)NCBI
RefSeq Acc Id: XM_036164900   ⟹   XP_036020793
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,151,202 - 44,259,001 (-)NCBI
RefSeq Acc Id: XM_036164901   ⟹   XP_036020794
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,151,202 - 44,258,467 (-)NCBI
RefSeq Acc Id: XM_036164902   ⟹   XP_036020795
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,151,202 - 44,259,397 (-)NCBI
RefSeq Acc Id: XM_036164903   ⟹   XP_036020796
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,151,202 - 44,260,850 (-)NCBI
RefSeq Acc Id: XM_036164904   ⟹   XP_036020797
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,150,963 - 44,259,051 (-)NCBI
RefSeq Acc Id: XM_036164905   ⟹   XP_036020798
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,151,202 - 44,258,922 (-)NCBI
RefSeq Acc Id: XM_036164906   ⟹   XP_036020799
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,151,202 - 44,258,456 (-)NCBI
RefSeq Acc Id: XR_001784640
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,151,202 - 44,260,850 (-)NCBI
GRCm38543,993,621 - 44,101,949 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001784642
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,150,963 - 44,260,850 (-)NCBI
GRCm38543,993,621 - 44,101,952 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001784643
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,150,963 - 44,258,446 (-)NCBI
GRCm38543,993,621 - 44,099,497 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004942456
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39544,151,202 - 44,258,926 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001157049 (Get FASTA)   NCBI Sequence Viewer  
  NP_001157050 (Get FASTA)   NCBI Sequence Viewer  
  NP_001157053 (Get FASTA)   NCBI Sequence Viewer  
  NP_001157054 (Get FASTA)   NCBI Sequence Viewer  
  NP_001157055 (Get FASTA)   NCBI Sequence Viewer  
  NP_001157056 (Get FASTA)   NCBI Sequence Viewer  
  NP_001157057 (Get FASTA)   NCBI Sequence Viewer  
  NP_032961 (Get FASTA)   NCBI Sequence Viewer  
  XP_006503849 (Get FASTA)   NCBI Sequence Viewer  
  XP_006503851 (Get FASTA)   NCBI Sequence Viewer  
  XP_006503852 (Get FASTA)   NCBI Sequence Viewer  
  XP_006503853 (Get FASTA)   NCBI Sequence Viewer  
  XP_006503854 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176209 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176211 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176212 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176213 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176214 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110067 (Get FASTA)   NCBI Sequence Viewer  
  XP_036020791 (Get FASTA)   NCBI Sequence Viewer  
  XP_036020792 (Get FASTA)   NCBI Sequence Viewer  
  XP_036020793 (Get FASTA)   NCBI Sequence Viewer  
  XP_036020794 (Get FASTA)   NCBI Sequence Viewer  
  XP_036020795 (Get FASTA)   NCBI Sequence Viewer  
  XP_036020796 (Get FASTA)   NCBI Sequence Viewer  
  XP_036020797 (Get FASTA)   NCBI Sequence Viewer  
  XP_036020798 (Get FASTA)   NCBI Sequence Viewer  
  XP_036020799 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAB86715 (Get FASTA)   NCBI Sequence Viewer  
  AAB96916 (Get FASTA)   NCBI Sequence Viewer  
  AAH28286 (Get FASTA)   NCBI Sequence Viewer  
  AAM28245 (Get FASTA)   NCBI Sequence Viewer  
  AAO11840 (Get FASTA)   NCBI Sequence Viewer  
  AAO72429 (Get FASTA)   NCBI Sequence Viewer  
  AAO72430 (Get FASTA)   NCBI Sequence Viewer  
  BAC26678 (Get FASTA)   NCBI Sequence Viewer  
  BAC26745 (Get FASTA)   NCBI Sequence Viewer  
  BAC39496 (Get FASTA)   NCBI Sequence Viewer  
  EDL37600 (Get FASTA)   NCBI Sequence Viewer  
  EDL37601 (Get FASTA)   NCBI Sequence Viewer  
  EDL37602 (Get FASTA)   NCBI Sequence Viewer  
  EDL37603 (Get FASTA)   NCBI Sequence Viewer  
  EDL37604 (Get FASTA)   NCBI Sequence Viewer  
  EDL37605 (Get FASTA)   NCBI Sequence Viewer  
  EDL37606 (Get FASTA)   NCBI Sequence Viewer  
  O54990 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_032961   ⟸   NM_008935
- Peptide Label: isoform s1 precursor
- UniProtKB: G3X9J8 (UniProtKB/TrEMBL),   Q8CDK8 (UniProtKB/TrEMBL),   Q8R056 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001157049   ⟸   NM_001163577
- Peptide Label: isoform s2 precursor
- UniProtKB: G5E8G5 (UniProtKB/TrEMBL),   Q8CDK8 (UniProtKB/TrEMBL),   Q8R056 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001157056   ⟸   NM_001163584
- Peptide Label: isoform s7 precursor
- UniProtKB: Q8CDK8 (UniProtKB/TrEMBL),   Q8R056 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001157057   ⟸   NM_001163585
- Peptide Label: isoform s8 precursor
- UniProtKB: Q8R056 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001157050   ⟸   NM_001163578
- Peptide Label: isoform s3 precursor
- UniProtKB: O54990 (UniProtKB/Swiss-Prot),   A0A0G2JDH9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001157053   ⟸   NM_001163581
- Peptide Label: isoform s4 precursor
- UniProtKB: O54990 (UniProtKB/Swiss-Prot),   A0A0G2JE50 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001157054   ⟸   NM_001163582
- Peptide Label: isoform s5 precursor
- UniProtKB: O54990 (UniProtKB/Swiss-Prot),   A0A0R4J0B0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001157055   ⟸   NM_001163583
- Peptide Label: isoform s6 precursor
- UniProtKB: O54990 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006503852   ⟸   XM_006503789
- Peptide Label: isoform X7
- UniProtKB: Q8CDK8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006503851   ⟸   XM_006503788
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_006503849   ⟸   XM_006503786
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006503853   ⟸   XM_006503790
- Peptide Label: isoform X7
- UniProtKB: Q8CDK8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006503854   ⟸   XM_006503791
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_017176214   ⟸   XM_017320725
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_017176213   ⟸   XM_017320724
- Peptide Label: isoform X1
- UniProtKB: G5E8G5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017176209   ⟸   XM_017320720
- Peptide Label: isoform X1
- UniProtKB: G5E8G5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017176211   ⟸   XM_017320722
- Peptide Label: isoform X1
- UniProtKB: G5E8G5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017176212   ⟸   XM_017320723
- Peptide Label: isoform X1
- UniProtKB: G5E8G5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030110067   ⟸   XM_030254207
- Peptide Label: isoform X3
RefSeq Acc Id: ENSMUSP00000142677   ⟸   ENSMUST00000198347
RefSeq Acc Id: ENSMUSP00000142632   ⟸   ENSMUST00000197706
RefSeq Acc Id: ENSMUSP00000142375   ⟸   ENSMUST00000197750
RefSeq Acc Id: ENSMUSP00000136483   ⟸   ENSMUST00000177946
RefSeq Acc Id: ENSMUSP00000073751   ⟸   ENSMUST00000074113
RefSeq Acc Id: ENSMUSP00000128978   ⟸   ENSMUST00000171543
RefSeq Acc Id: ENSMUSP00000084709   ⟸   ENSMUST00000087442
RefSeq Acc Id: ENSMUSP00000084707   ⟸   ENSMUST00000087441
RefSeq Acc Id: ENSMUSP00000137557   ⟸   ENSMUST00000179059
RefSeq Acc Id: ENSMUSP00000129909   ⟸   ENSMUST00000165909
RefSeq Acc Id: ENSMUSP00000030973   ⟸   ENSMUST00000030973
RefSeq Acc Id: ENSMUSP00000143403   ⟸   ENSMUST00000196178
RefSeq Acc Id: ENSMUSP00000142483   ⟸   ENSMUST00000196378
RefSeq Acc Id: XP_036020797   ⟸   XM_036164904
- Peptide Label: isoform X8
RefSeq Acc Id: XP_036020791   ⟸   XM_036164898
- Peptide Label: isoform X3
RefSeq Acc Id: XP_036020796   ⟸   XM_036164903
- Peptide Label: isoform X6
RefSeq Acc Id: XP_036020795   ⟸   XM_036164902
- Peptide Label: isoform X5
RefSeq Acc Id: XP_036020792   ⟸   XM_036164899
- Peptide Label: isoform X4
RefSeq Acc Id: XP_036020793   ⟸   XM_036164900
- Peptide Label: isoform X5
RefSeq Acc Id: XP_036020798   ⟸   XM_036164905
- Peptide Label: isoform X9
RefSeq Acc Id: XP_036020794   ⟸   XM_036164901
- Peptide Label: isoform X5
RefSeq Acc Id: XP_036020799   ⟸   XM_036164906
- Peptide Label: isoform X9

Promoters
RGD ID:6886628
Promoter ID:EPDNEW_M6765
Type:initiation region
Name:Prom1_3
Description:Mus musculus prominin 1 , transcript variant 8, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M6766  EPDNEW_M6767  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38544,099,206 - 44,099,266EPDNEW
RGD ID:6886630
Promoter ID:EPDNEW_M6766
Type:initiation region
Name:Prom1_1
Description:Mus musculus prominin 1 , transcript variant 8, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M6765  EPDNEW_M6767  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38544,101,710 - 44,101,770EPDNEW
RGD ID:6886632
Promoter ID:EPDNEW_M6767
Type:multiple initiation site
Name:Prom1_2
Description:Mus musculus prominin 1 , transcript variant 8, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M6765  EPDNEW_M6766  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38544,101,945 - 44,102,005EPDNEW
RGD ID:6838109
Promoter ID:MM_KWN:42175
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney
Transcripts:UC008XIE.1,   UC008XIL.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36544,489,871 - 44,490,371 (-)MPROMDB
RGD ID:6838114
Promoter ID:MM_KWN:42177
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney
Transcripts:AK008591_2010320H13RIK,   ENSMUST00000030973,   ENSMUST00000087442,   NM_001163577,   NM_008935,   UC008XIH.1,   UC008XIM.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36544,492,671 - 44,493,171 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1100886 AgrOrtholog
Ensembl Genes ENSMUSG00000029086 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000030973 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000073751 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000084707 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000084709 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000128978 UniProtKB/TrEMBL
  ENSMUSP00000129909 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000136483 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000137557 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000142375 UniProtKB/TrEMBL
  ENSMUSP00000142483 UniProtKB/TrEMBL
  ENSMUSP00000142632 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000142677 UniProtKB/TrEMBL
  ENSMUSP00000143403 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000030973 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000074113 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000087441 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000087442 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000165909 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000171543 UniProtKB/TrEMBL
  ENSMUST00000177946 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000179059 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000196178 UniProtKB/TrEMBL
  ENSMUST00000196378 UniProtKB/TrEMBL
  ENSMUST00000197706 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000197750 UniProtKB/TrEMBL
  ENSMUST00000198347 UniProtKB/TrEMBL
InterPro Prominin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:19126 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1100886 ENTREZGENE
NCBI Gene 19126 ENTREZGENE
PANTHER PTHR22730 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Prominin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Prom1 PhenoGen
UniProt A0A0G2JDH9 ENTREZGENE, UniProtKB/TrEMBL
  A0A0G2JDS7_MOUSE UniProtKB/TrEMBL
  A0A0G2JE50 ENTREZGENE, UniProtKB/TrEMBL
  A0A0G2JE90_MOUSE UniProtKB/TrEMBL
  A0A0G2JG30_MOUSE UniProtKB/TrEMBL
  A0A0R4J0B0 ENTREZGENE, UniProtKB/TrEMBL
  G3X9J8 ENTREZGENE, UniProtKB/TrEMBL
  G5E8G5 ENTREZGENE, UniProtKB/TrEMBL
  O54990 ENTREZGENE, UniProtKB/Swiss-Prot
  Q8C3K1_MOUSE UniProtKB/TrEMBL
  Q8CDK8 ENTREZGENE, UniProtKB/TrEMBL
  Q8R056 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary O35408 UniProtKB/Swiss-Prot
  Q80XB2 UniProtKB/Swiss-Prot
  Q80XB3 UniProtKB/Swiss-Prot
  Q80XB6 UniProtKB/Swiss-Prot
  Q8BH12 UniProtKB/Swiss-Prot